BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006402
(646 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 181/317 (57%), Gaps = 14/317 (4%)
Query: 336 FHLKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQ-QVLNEVG 394
F L+EL+ A++ FS + ILG GGFG+VYKG L DGT+VAVK K + + Q EV
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK-YSSFNLTWSTRLRIALQ 453
++S H+NL+RL G C+ + LL+Y Y+ANG++ L + S L W R RIAL
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 454 TAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTL 513
+A LAYLH I HRDVK+ NILLD++F + V DFGL++L HV +GT+
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 514 GYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSR--DPDDVNLAIYVSQRASNG 571
G++ PEY + ++K+DV+ YGV+LLEL+T Q+A D +R + DDV L +V
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 572 AIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL------QRI 625
+ +VD LQG+ + + ++A+ C + ERP M++VV L +R
Sbjct: 268 KLEALVDVDLQGNYKDEEV----EQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW 323
Query: 626 IEIVNQEKVSNDVNVET 642
E +E D N T
Sbjct: 324 EEWQKEEMFRQDFNYPT 340
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 192/327 (58%), Gaps = 11/327 (3%)
Query: 310 AKQAKLAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD 369
+K +K D L SS + + L +L++ATN F + ++G G FG+VYKG L+D
Sbjct: 3 SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62
Query: 370 GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
G VA+K + + ++ E+ LS H +LV L+G C E + +LIY+Y+ NG L
Sbjct: 63 GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122
Query: 430 HDHLHG-KYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL+G + +++W RL I + A L YLH+ A I HRDVKS NILLD++F K
Sbjct: 123 KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPK 179
Query: 489 VADFGLSRLAKP-GLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQK 547
+ DFG+S+ G +H+ +GTLGY+DPEY+ +LT+KSDVYS+GVVL E+L ++
Sbjct: 180 ITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239
Query: 548 AIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLRE 607
AI S + VNLA + + +NG + ++VDP L A SL+ F + AV CL
Sbjct: 240 AIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL----ADKIRPESLRKFGDTAVKCLAL 295
Query: 608 KKSERPSMTDVVHELQRIIEIVNQEKV 634
+RPSM DV+ +L+ + + QE V
Sbjct: 296 SSEDRPSMGDVLWKLEYALRL--QESV 320
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 191/327 (58%), Gaps = 11/327 (3%)
Query: 310 AKQAKLAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD 369
+K +K D L SS + + L +L++ATN F + ++G G FG+VYKG L+D
Sbjct: 3 SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62
Query: 370 GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
G VA+K + + ++ E+ LS H +LV L+G C E + +LIY+Y+ NG L
Sbjct: 63 GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122
Query: 430 HDHLHG-KYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL+G + +++W RL I + A L YLH+ A I HRDVKS NILLD++F K
Sbjct: 123 KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPK 179
Query: 489 VADFGLSRLAKP-GLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQK 547
+ DFG+S+ +H+ +GTLGY+DPEY+ +LT+KSDVYS+GVVL E+L ++
Sbjct: 180 ITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239
Query: 548 AIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLRE 607
AI S + VNLA + + +NG + ++VDP L A SL+ F + AV CL
Sbjct: 240 AIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL----ADKIRPESLRKFGDTAVKCLAL 295
Query: 608 KKSERPSMTDVVHELQRIIEIVNQEKV 634
+RPSM DV+ +L+ + + QE V
Sbjct: 296 SSEDRPSMGDVLWKLEYALRL--QESV 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 171/292 (58%), Gaps = 8/292 (2%)
Query: 336 FHLKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQ-QVLNEVG 394
F L+EL+ A++ F + ILG GGFG+VYKG L DG +VAVK K + + Q EV
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK-YSSFNLTWSTRLRIALQ 453
++S H+NL+RL G C+ + LL+Y Y+ANG++ L + S L W R RIAL
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 454 TAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTL 513
+A LAYLH I HRDVK+ NILLD++F + V DFGL++L HV +G +
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 514 GYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSR--DPDDVNLAIYVSQRASNG 571
G++ PEY + ++K+DV+ YGV+LLEL+T Q+A D +R + DDV L +V
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 572 AIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQ 623
+ +VD LQG+ + + ++A+ C + ERP M++VV L+
Sbjct: 260 KLEALVDVDLQGNYKDEEV----EQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 167/312 (53%), Gaps = 20/312 (6%)
Query: 324 KSSNIAGKPARIFHLKELKKATNGFSKERI------LGSGGFGEVYKGELQDGTVVAVKS 377
KS ++ F ELK TN F + I +G GGFG VYKG + + TV K
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKL 62
Query: 378 AKVGNIKS---TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLH 434
A + +I + QQ E+ ++++ H+NLV LLG + + L+Y Y+ NG+L D L
Sbjct: 63 AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 435 GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL 494
+ L+W R +IA A + +LH + HRD+KS NILLD+ F +K++DFGL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGL 179
Query: 495 SRLA-KPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSR 553
+R + K + + + GT Y+ PE R ++T KSD+YS+GVVLLE++T A+D R
Sbjct: 180 ARASEKFAQTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 554 DPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERP 613
+P + L I I + +D ++ +++ S++ +A CL EKK++RP
Sbjct: 239 EP-QLLLDIKEEIEDEEKTIEDYIDKKMNDADST-----SVEAMYSVASQCLHEKKNKRP 292
Query: 614 SMTDVVHELQRI 625
+ V LQ +
Sbjct: 293 DIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 161/300 (53%), Gaps = 20/300 (6%)
Query: 336 FHLKELKKATNGFSKERI------LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKS---T 386
F ELK TN F + I +G GGFG VYKG + + TV K A + +I +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST 446
QQ E+ ++++ H+NLV LLG + + L+Y Y+ NG+L D L + L+W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 447 RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVS 506
R +IA A + +LH + HRD+KS NILLD+ F +K++DFGL+R ++ V
Sbjct: 129 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 507 TC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVS 565
GT Y+ PE R ++T KSD+YS+GVVLLE++T A+D R+P + L I
Sbjct: 186 XXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKEE 243
Query: 566 QRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
I + +D ++ +++ S++ +A CL EKK++RP + V LQ +
Sbjct: 244 IEDEEKTIEDYIDKKMNDADST-----SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 166/312 (53%), Gaps = 20/312 (6%)
Query: 324 KSSNIAGKPARIFHLKELKKATNGFSKERI------LGSGGFGEVYKGELQDGTVVAVKS 377
KS ++ F ELK TN F + I +G GGFG VYKG + + TV K
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKL 62
Query: 378 AKVGNIKS---TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLH 434
A + +I + QQ E+ ++++ H+NLV LLG + + L+Y Y+ NG+L D L
Sbjct: 63 AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 435 GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL 494
+ L+W R +IA A + +LH + HRD+KS NILLD+ F +K++DFGL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGL 179
Query: 495 SRLA-KPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSR 553
+R + K + + GT Y+ PE R ++T KSD+YS+GVVLLE++T A+D R
Sbjct: 180 ARASEKFAQTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 554 DPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERP 613
+P + L I I + +D ++ +++ S++ +A CL EKK++RP
Sbjct: 239 EP-QLLLDIKEEIEDEEKTIEDYIDKKMNDADST-----SVEAMYSVASQCLHEKKNKRP 292
Query: 614 SMTDVVHELQRI 625
+ V LQ +
Sbjct: 293 DIKKVQQLLQEM 304
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 20/299 (6%)
Query: 336 FHLKELKKATNGFSKERI------LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKS---T 386
F ELK TN F + I G GGFG VYKG + + TV K A + +I +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST 446
QQ E+ + ++ H+NLV LLG + + L+Y Y NG+L D L + L+W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 447 RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVS 506
R +IA A + +LH + HRD+KS NILLD+ F +K++DFGL+R ++ V
Sbjct: 126 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 507 TC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVS 565
GT Y PE R ++T KSD+YS+GVVLLE++T A+D R+P + L I
Sbjct: 183 XSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKEE 240
Query: 566 QRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQR 624
I + +D + +++ S++ +A CL EKK++RP + V LQ
Sbjct: 241 IEDEEKTIEDYIDKKXNDADST-----SVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 113/200 (56%), Gaps = 6/200 (3%)
Query: 350 KERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQ--QVLNEVGILSQVNHKNLVRL 407
KE+I G+G FG V++ E G+ VAVK + + + + L EV I+ ++ H N+V
Sbjct: 42 KEKI-GAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
+G + ++ EY++ G+L+ LH + L RL +A A+ + YLH+
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-P 158
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
PI HRD+KS N+L+D + KV DFGLSRL K S A GT ++ PE R+
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 528 DKSDVYSYGVVLLELLTSQK 547
+KSDVYS+GV+L EL T Q+
Sbjct: 218 EKSDVYSFGVILWELATLQQ 237
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 113/200 (56%), Gaps = 6/200 (3%)
Query: 350 KERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQ--QVLNEVGILSQVNHKNLVRL 407
KE+I G+G FG V++ E G+ VAVK + + + + L EV I+ ++ H N+V
Sbjct: 42 KEKI-GAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
+G + ++ EY++ G+L+ LH + L RL +A A+ + YLH+
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-P 158
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
PI HR++KS N+L+D + KV DFGLSRL K S A GT ++ PE R+
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 528 DKSDVYSYGVVLLELLTSQK 547
+KSDVYS+GV+L EL T Q+
Sbjct: 218 EKSDVYSFGVILWELATLQQ 237
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 87
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 143
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 204 SFGILLTEIVT 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 80
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 81 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 136
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 197 SFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 79
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 80 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 135
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 196 SFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 78
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 134
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 195 SFGILLTEIVT 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 86
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 142
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 203 SFGILLTEIVT 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 78
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 134
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 195 SFGILLTEIVT 205
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 84
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 140
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 201 SFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 83
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 84 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 139
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 199
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 200 SFGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 84
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 140
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 201 SFGILLTEIVT 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 78
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 134
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 195 SFGILLTEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 88
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 144
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 204
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 205 SFGILLTEIVT 215
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 134/276 (48%), Gaps = 25/276 (9%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
A Q ++ ++ +L+ HLH + F + + IA QTA + YLH+ + I HRD
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 474 VKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ---LTDK 529
+KS NI L +D K+ DFGL + ++ SH G++ ++ PE R + +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 530 SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVN 589
SDVY++G+VL EL+T Q + D + I + R S + P L ++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQI---IEMVGRGS-------LSPDLSKVRSNCP 255
Query: 590 ILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
K L CL++K+ ERPS ++ E++ +
Sbjct: 256 -----KRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 73
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 74 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 129
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 190 SFGILLTEIVT 200
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 136/276 (49%), Gaps = 25/276 (9%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
Q ++ ++ +L+ HLH + F + + IA QTA + YLH+ + I HRD
Sbjct: 80 P-QLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHRD 133
Query: 474 VKSTNILLDDDFNSKVADFGLSRL-AKPGLSHVSTCAQGTLGYLDPEYYR---NYQLTDK 529
+KS NI L +D K+ DFGL+ + ++ SH G++ ++ PE R + + +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 530 SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVN 589
SDVY++G+VL EL+T Q + D + I + R S + P L ++
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNINNRDQI---IEMVGRGS-------LSPDLSKVRSNCP 243
Query: 590 ILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
K L CL++K+ ERPS ++ E++ +
Sbjct: 244 -----KRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 148/302 (49%), Gaps = 38/302 (12%)
Query: 349 SKERILGSGGFGEVYKGELQDGT-----VVAVKSAKVGNI-KSTQQVLNEVGILSQVNHK 402
++++++G+G FGEVYKG L+ + VA+K+ K G K L E GI+ Q +H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYSSFNLTWSTRLRIALQTAEALA 459
N++RL G + + ++I EY+ NG L L G++S L R A +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR-----GIAAGMK 161
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGLSHVSTCAQGTLGYLD 517
YL + Y HRD+ + NIL++ + KV+DFGLSR+ + P ++ ++ + + +
Sbjct: 162 YLANMNYV---HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVV 577
PE + T SDV+S+G+V+ E++T + P SN +M+ +
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMT------YGERP---------YWELSNHEVMKAI 263
Query: 578 DPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQEKVSND 637
+ G + ++ +L + C +++++ RP D+V L ++I + K D
Sbjct: 264 N---DGFRLPTPMDCPSAIY-QLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLAD 319
Query: 638 VN 639
+
Sbjct: 320 FD 321
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 134/276 (48%), Gaps = 25/276 (9%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
Q ++ ++ +L+ HLH + F + + IA QTA + YLH+ + I HRD
Sbjct: 92 P-QLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 474 VKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ---LTDK 529
+KS NI L +D K+ DFGL + ++ SH G++ ++ PE R + +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 530 SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVN 589
SDVY++G+VL EL+T Q + D + I + R S + P L ++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQI---IEMVGRGS-------LSPDLSKVRSNCP 255
Query: 590 ILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
K L CL++K+ ERPS ++ E++ +
Sbjct: 256 -----KRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 74
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HR+
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRN 130
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 191 SFGILLTEIVT 201
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 6/191 (3%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G GEV+ G T VAVKS K G++ S L E ++ Q+ H+ LVRL V
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY-AVVT 78
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+ NG+L D L S LT + L +A Q AE +A++ Y HRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 134
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ NIL+ D + K+ADFGL+RL + A+ + + PE T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 534 SYGVVLLELLT 544
S+G++L E++T
Sbjct: 195 SFGILLTEIVT 205
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 24/262 (9%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G + T VAVK+ K G + S Q L E ++ + H LVRL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I EY+A G+L D L L + + Q AE +AY+ Y HRD
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIERKNYI---HRD 135
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ N+L+ + K+ADFGL+R+ + A+ + + PE T KSDV+
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 534 SYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMS 593
S+G++L E++T K R DV A+ S G M PR++ + +M
Sbjct: 196 SFGILLYEIVTYGKIPYPGRTNADVMTAL------SQGYRM----PRVENCPDELYDIMK 245
Query: 594 LKLFSELAVACLREKKSERPSM 615
+ C +EK ERP+
Sbjct: 246 M---------CWKEKAEERPTF 258
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 134/277 (48%), Gaps = 31/277 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
A Q ++ ++ +L+ HLH + F + + IA QTA+ + YLH+ + I HRD
Sbjct: 75 APQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 474 VKSTNILLDDDFNSKVADFGLSRL-AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK--- 529
+KS NI L +D K+ DFGL+ + ++ SH G++ ++ PE R + DK
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKNPY 186
Query: 530 ---SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEA 586
SDVY++G+VL EL+T Q + D + I++ R + P L +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IFMVGRG-------YLSPDLSKVRS 236
Query: 587 SVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQ 623
+ K L CL++K+ ERP ++ ++
Sbjct: 237 NCP-----KAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 31/277 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
Q ++ ++ +L+ HLH + F + + IA QTA+ + YLH+ + I HRD
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 474 VKSTNILLDDDFNSKVADFGLSRL-AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK--- 529
+KS NI L +D K+ DFGL+ + ++ SH G++ ++ PE R + DK
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKNPY 186
Query: 530 ---SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEA 586
SDVY++G+VL EL+T Q + D + I++ R + P L +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IFMVGRG-------YLSPDLSKVRS 236
Query: 587 SVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQ 623
+ K L CL++K+ ERP ++ ++
Sbjct: 237 NCP-----KAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 31/277 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
Q ++ ++ +L+ HLH + F + + IA QTA+ + YLH+ + I HRD
Sbjct: 78 P-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIHRD 131
Query: 474 VKSTNILLDDDFNSKVADFGLSRL-AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK--- 529
+KS NI L +D K+ DFGL+ + ++ SH G++ ++ PE R + DK
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKNPY 188
Query: 530 ---SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEA 586
SDVY++G+VL EL+T Q + D + I++ R + P L +
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IFMVGRG-------YLSPDLSKVRS 238
Query: 587 SVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQ 623
+ K L CL++K+ ERP ++ ++
Sbjct: 239 NCP-----KAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 31/277 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
Q ++ ++ +L+ HLH + F + + IA QTA+ + YLH+ + I HRD
Sbjct: 81 P-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 474 VKSTNILLDDDFNSKVADFGLSRL-AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK--- 529
+KS NI L +D K+ DFGL+ + ++ SH G++ ++ PE R + DK
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKNPY 191
Query: 530 ---SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEA 586
SDVY++G+VL EL+T Q + D + I++ R + P L +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IFMVGRG-------YLSPDLSKVRS 241
Query: 587 SVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQ 623
+ K L CL++K+ ERP ++ ++
Sbjct: 242 NCP-----KAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 31/277 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
Q ++ ++ +L+ HLH + F + + IA QTA+ + YLH+ + I HRD
Sbjct: 81 P-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 474 VKSTNILLDDDFNSKVADFGLSRL-AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK--- 529
+KS NI L +D K+ DFGL+ + ++ SH G++ ++ PE R + DK
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKNPY 191
Query: 530 ---SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEA 586
SDVY++G+VL EL+T Q + D + I++ R + P L +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IFMVGRG-------YLSPDLSKVRS 241
Query: 587 SVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQ 623
+ K L CL++K+ ERP ++ ++
Sbjct: 242 NCP-----KAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 31/277 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
Q ++ ++ +L+ HLH + F + + IA QTA+ + YLH+ + I HRD
Sbjct: 103 P-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIHRD 156
Query: 474 VKSTNILLDDDFNSKVADFGLSRL-AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK--- 529
+KS NI L +D K+ DFGL+ + ++ SH G++ ++ PE R + DK
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKNPY 213
Query: 530 ---SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEA 586
SDVY++G+VL EL+T Q + D + I++ R + P L +
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IFMVGRG-------YLSPDLSKVRS 263
Query: 587 SVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQ 623
+ K L CL++K+ ERP ++ ++
Sbjct: 264 NCP-----KAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 31/277 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
Q ++ ++ +L+ HLH + F + + IA QTA+ + YLH+ + I HRD
Sbjct: 104 P-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 474 VKSTNILLDDDFNSKVADFGLSRL-AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK--- 529
+KS NI L +D K+ DFGL+ + ++ SH G++ ++ PE R + DK
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKNPY 214
Query: 530 ---SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEA 586
SDVY++G+VL EL+T Q + D + I++ R + P L +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IFMVGRG-------YLSPDLSKVRS 264
Query: 587 SVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQ 623
+ K L CL++K+ ERP ++ ++
Sbjct: 265 NCP-----KAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 31/277 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
Q ++ ++ +L+ HLH + F + + IA QTA+ + YLH+ + I HRD
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 474 VKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK--- 529
+KS NI L +D K+ DFGL + ++ SH G++ ++ PE R + DK
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKNPY 186
Query: 530 ---SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEA 586
SDVY++G+VL EL+T Q + D + I++ R + P L +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IFMVGRG-------YLSPDLSKVRS 236
Query: 587 SVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQ 623
+ K L CL++K+ ERP ++ ++
Sbjct: 237 NCP-----KAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 31/277 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
Q ++ ++ +L+ HLH + F + + IA QTA+ + YLH+ + I HRD
Sbjct: 96 P-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIHRD 149
Query: 474 VKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK--- 529
+KS NI L +D K+ DFGL + ++ SH G++ ++ PE R + DK
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKNPY 206
Query: 530 ---SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEA 586
SDVY++G+VL EL+T Q + D + I++ R + P L +
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IFMVGRG-------YLSPDLSKVRS 256
Query: 587 SVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQ 623
+ K L CL++K+ ERP ++ ++
Sbjct: 257 NCP-----KAMKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 31/277 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + + Q NEVG+L + H N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
Q ++ ++ +L+ HLH + F + + IA QTA+ + YLH+ + I HRD
Sbjct: 104 P-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 474 VKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK--- 529
+KS NI L +D K+ DFGL + ++ SH G++ ++ PE R + DK
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKNPY 214
Query: 530 ---SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEA 586
SDVY++G+VL EL+T Q + D + I++ R + P L +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IFMVGRG-------YLSPDLSKVRS 264
Query: 587 SVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQ 623
+ K L CL++K+ ERP ++ ++
Sbjct: 265 NCP-----KAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 125/262 (47%), Gaps = 24/262 (9%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G + T VAVK+ K G + S Q L E ++ + H LVRL +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
E +I E++A G+L D L + + + Q AE +AY+ Y HRD
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGG-KVLLPKLIDFSAQIAEGMAYIERKNYI---HRD 134
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+++ N+L+ + K+ADFGL+R+ + A+ + + PE T KS+V+
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 534 SYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMS 593
S+G++L E++T K R DV A+ S G M PR++ + +M
Sbjct: 195 SFGILLYEIVTYGKIPYPGRTNADVMSAL------SQGYRM----PRMENCPDELYDIMK 244
Query: 594 LKLFSELAVACLREKKSERPSM 615
+ C +EK ERP+
Sbjct: 245 M---------CWKEKAEERPTF 257
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 117/222 (52%), Gaps = 24/222 (10%)
Query: 344 ATNGFSKERILGSGGFGEVYKGEL-QDGTVVAVKSAKVGN-------IKSTQQVLNEVGI 395
A N E+ +G GGFG V+KG L +D +VVA+KS +G+ I+ Q+ EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 396 LSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTA 455
+S +NH N+V+L G P ++ E++ G L+ L K + + WS +LR+ L A
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIA 132
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDD-DFN----SKVADFGLSRLAKPGLSHVSTCAQ 510
+ Y+ + PI HRD++S NI L D N +KVADFGLS+ + H +
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS----VHSVSGLL 187
Query: 511 GTLGYLDPEYY--RNYQLTDKSDVYSYGVVLLELLTSQKAID 550
G ++ PE T+K+D YS+ ++L +LT + D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 24/210 (11%)
Query: 351 ERILGSGGFGEVYKGELQDGTVVAVKSAKVG---NIKST-QQVLNEVGILSQVNHKNLVR 406
E I+G GGFG+VY+ G VAVK+A+ +I T + V E + + + H N++
Sbjct: 12 EEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L G C++ L+ E+ G L+ L GK ++ + A+Q A + YLH A
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL----VNWAVQIARGMNYLHDEAI 126
Query: 467 TPIYHRDVKSTNILL-----DDDFNS---KVADFGLSRLAKPGLSHVST--CAQGTLGYL 516
PI HRD+KS+NIL+ + D ++ K+ DFGL+R H +T A G ++
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWM 181
Query: 517 DPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
PE R + SDV+SYGV+L ELLT +
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKIRHEKLVQLY--AVV 82
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 138
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 82
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 138
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 332 PARIFH--LKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-K 384
P + H KEL ATN S ++++G+G FGEV G L + VA+K+ KVG K
Sbjct: 29 PTQTVHEFAKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 86
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTW 444
+ L E I+ Q +H N++RL G +++ +++ EY+ NG+L L + F +
Sbjct: 87 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 146
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGL 502
+ + A + YL Y HRD+ + NIL++ + KV+DFGLSR+ + P
Sbjct: 147 LVGMLRGI--ASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 201
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
++ + + + + PE + T SDV+SYG+VL E+++ + P
Sbjct: 202 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP------- 248
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
SN +++ VD +G+ + L+ +L + C ++ ++ RP +V L
Sbjct: 249 --YWEMSNQDVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSIL 302
Query: 623 QRII 626
++I
Sbjct: 303 DKLI 306
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 332 PARIFH--LKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-K 384
P + H KEL ATN S ++++G+G FGEV G L + VA+K+ KVG K
Sbjct: 31 PTQTVHEFAKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTW 444
+ L E I+ Q +H N++RL G +++ +++ EY+ NG+L L + F +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGL 502
+ + A + YL Y HRD+ + NIL++ + KV+DFGLSR+ + P
Sbjct: 149 LVGMLRGI--ASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
++ + + + + PE + T SDV+SYG+VL E+++ + P
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP------- 250
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
SN +++ VD +G+ + L+ +L + C ++ ++ RP +V L
Sbjct: 251 --YWEMSNQDVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 623 QRII 626
++I
Sbjct: 305 DKLI 308
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 33/295 (11%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKGELQ----DGTVVAVKSAKVGNI-KSTQQVLNEV 393
KEL ATN S ++++G+G FGEV G L+ VA+K+ KVG K + L E
Sbjct: 11 KELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 394 GILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQ 453
I+ Q +H N++RL G +++ +++ EY+ NG+L L + F + + +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRG 126
Query: 454 TAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGLSHVSTCAQG 511
A + YL Y HRD+ + NIL++ + KV+DFGLSR+ + P ++ + +
Sbjct: 127 IASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 512 TLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNG 571
+ + PE + T SDV+SYG+VL E+++ + P SN
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP---------YWEMSNQ 228
Query: 572 AIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
+++ VD +G+ + L+ +L + C ++ ++ RP +V L ++I
Sbjct: 229 DVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K GN+ S + L E ++ ++ H+ LV+L V
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 249
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 305
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL RL + A+ + + PE + T KSDV
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 366 WSFGILLTELTTKGR 380
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 332 PARIFH--LKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-K 384
P + H KEL ATN S ++++G+G FGEV G L + VA+K+ KVG K
Sbjct: 31 PTQTVHEFAKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTW 444
+ L E I+ Q +H N++RL G +++ +++ EY+ NG+L L + F +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGL 502
+ + A + YL Y HRD+ + NIL++ + KV+DFGLSR+ + P
Sbjct: 149 LVGMLRGI--ASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
++ + + + + PE + T SDV+SYG+VL E+++ + P
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP------- 250
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
SN +++ VD +G+ + L+ +L + C ++ ++ RP +V L
Sbjct: 251 --YWEMSNQDVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 623 QRII 626
++I
Sbjct: 305 DKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 332 PARIFH--LKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-K 384
P + H KEL ATN S ++++G+G FGEV G L + VA+K+ KVG K
Sbjct: 31 PTQTVHEFAKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTW 444
+ L E I+ Q +H N++RL G +++ +++ EY+ NG+L L + F +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGL 502
+ + A + YL Y HRD+ + NIL++ + KV+DFGLSR+ + P
Sbjct: 149 LVGMLRGI--ASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
++ + + + + PE + T SDV+SYG+VL E+++ + P
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP------- 250
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
SN +++ VD +G+ + L+ +L + C ++ ++ RP +V L
Sbjct: 251 --YWEMSNQDVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 623 QRII 626
++I
Sbjct: 305 DKLI 308
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 33/295 (11%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKGELQ----DGTVVAVKSAKVGNI-KSTQQVLNEV 393
KEL ATN S ++++G+G FGEV G L+ VA+K+ KVG K + L E
Sbjct: 28 KELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 85
Query: 394 GILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQ 453
I+ Q +H N++RL G +++ +++ EY+ NG+L L + F + + +
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRG 143
Query: 454 TAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGLSHVSTCAQG 511
A + YL Y HRD+ + NIL++ + KV+DFGLSR+ + P ++ + +
Sbjct: 144 IASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 200
Query: 512 TLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNG 571
+ + PE + T SDV+SYG+VL E+++ + P SN
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP---------YWEMSNQ 245
Query: 572 AIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
+++ VD +G+ + L+ +L + C ++ ++ RP +V L ++I
Sbjct: 246 DVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSILDKLI 296
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 332 PARIFH--LKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-K 384
P + H KEL ATN S ++++G+G FGEV G L + VA+K+ KVG K
Sbjct: 31 PTQTVHEFAKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTW 444
+ L E I+ Q +H N++RL G +++ +++ EY+ NG+L L + F +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGL 502
+ + A + YL Y HRD+ + NIL++ + KV+DFGLSR+ + P
Sbjct: 149 LVGMLRGI--ASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
++ + + + + PE + T SDV+SYG+VL E+++ + P
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP------- 250
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
SN +++ VD +G+ + L+ +L + C ++ ++ RP +V L
Sbjct: 251 --YWEMSNQDVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 623 QRII 626
++I
Sbjct: 305 DKLI 308
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 72
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 128
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 189 WSFGILLTELTTKGR 203
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 71
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 127
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 188 WSFGILLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 73
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 129
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 190 WSFGILLTELTTKGR 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 82
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 138
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 75
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 131
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 192 WSFGILLTELTTKGR 206
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 414 AEQPLLIY-EYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ I EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 138
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 82
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 138
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 344 ATNGFSKERILGSGGFGEVYKGEL-QDGTVVAVKSAKVGN-------IKSTQQVLNEVGI 395
A N E+ +G GGFG V+KG L +D +VVA+KS +G+ I+ Q+ EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 396 LSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTA 455
+S +NH N+V+L G P ++ E++ G L+ L K + + WS +LR+ L A
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIA 132
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDD-DFN----SKVADFGLSRLAKPGLSHVSTCAQ 510
+ Y+ + PI HRD++S NI L D N +KVADFG S+ + H +
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS----VHSVSGLL 187
Query: 511 GTLGYLDPEYY--RNYQLTDKSDVYSYGVVLLELLTSQKAID 550
G ++ PE T+K+D YS+ ++L +LT + D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 138
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 332 PARIFH--LKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-K 384
P + H KEL ATN S ++++G+G FGEV G L + VA+K+ KVG K
Sbjct: 31 PTQTVHEFAKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTW 444
+ L E I+ Q +H N++RL G +++ +++ EY+ NG+L L + F +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGL 502
+ + A + YL Y HRD+ + NIL++ + KV+DFGL+R+ + P
Sbjct: 149 LVGMLRGI--ASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLARVLEDDPEA 203
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
++ + + + + PE + T SDV+SYG+VL E+++ + P
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP------- 250
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
SN +++ VD +G+ + L+ +L + C ++ ++ RP +V L
Sbjct: 251 --YWEMSNQDVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 623 QRII 626
++I
Sbjct: 305 DKLI 308
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 25/274 (9%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG V+ G + VA+K+ + G + S + + E ++ +++H LV+L G C+E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
L++E++ +G L D+L + F T L + L E +AYL A + HRD
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC---VIHRD 131
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+ + N L+ ++ KV+DFG++R ST + + + PE + + + KSDV+
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 534 SYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMS 593
S+GV++ E+ + K +R +V I R + PRL AS ++
Sbjct: 192 SFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--------LYKPRL----ASTHVY-- 237
Query: 594 LKLFSELAVACLREKKSERPSMTDVVHELQRIIE 627
++ C RE+ +RP+ + ++ +L I E
Sbjct: 238 -----QIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 344 ATNGFSKERILGSGGFGEVYKGEL-QDGTVVAVKSAKVGN-------IKSTQQVLNEVGI 395
A N E+ +G GGFG V+KG L +D +VVA+KS +G+ I+ Q+ EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 396 LSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTA 455
+S +NH N+V+L G P ++ E++ G L+ L K + + WS +LR+ L A
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIA 132
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDD-DFN----SKVADFGLSRLAKPGLSHVSTCAQ 510
+ Y+ + PI HRD++S NI L D N +KVADF LS+ + H +
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS----VHSVSGLL 187
Query: 511 GTLGYLDPEYY--RNYQLTDKSDVYSYGVVLLELLTSQKAID 550
G ++ PE T+K+D YS+ ++L +LT + D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 332 PARIFH--LKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-K 384
P + H KEL ATN S ++++G+G FGEV G L + VA+K+ KVG K
Sbjct: 31 PTQTVHEFAKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTW 444
+ L E I+ Q +H N++RL G +++ +++ EY+ NG+L L + F +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGL 502
+ + A + YL + HRD+ + NIL++ + KV+DFGLSR+ + P
Sbjct: 149 LVGMLRGI--ASGMKYLSDMGFV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
++ + + + + PE + T SDV+SYG+VL E+++ + P
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP------- 250
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
SN +++ VD +G+ + L+ +L + C ++ ++ RP +V L
Sbjct: 251 --YWEMSNQDVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 623 QRII 626
++I
Sbjct: 305 DKLI 308
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 148/304 (48%), Gaps = 35/304 (11%)
Query: 332 PARIFH--LKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-K 384
P + H KEL ATN S ++++G+G FGEV G L + VA+K+ KVG K
Sbjct: 31 PTQTVHEFAKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTW 444
+ L E I+ Q +H N++RL G +++ +++ EY+ NG+L L + F +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGL 502
+ + A + YL Y HRD+ + NIL++ + KV+DFGL R+ + P
Sbjct: 149 LVGMLRGI--ASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
++ + + + + PE + T SDV+SYG+VL E+++ + P
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP------- 250
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
SN +++ VD +G+ + L+ +L + C ++ ++ RP +V L
Sbjct: 251 --YWEMSNQDVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 623 QRII 626
++I
Sbjct: 305 DKLI 308
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 138
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 82
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 138
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 25/274 (9%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG V+ G + VA+K+ K G++ S + E ++ +++H LV+L G C+E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSM-SEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
L++E++ +G L D+L + F T L + L E +AYL A + HRD
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC---VIHRD 148
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+ + N L+ ++ KV+DFG++R ST + + + PE + + + KSDV+
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 534 SYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMS 593
S+GV++ E+ + K +R +V I R + PRL AS ++
Sbjct: 209 SFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--------LYKPRL----ASTHVY-- 254
Query: 594 LKLFSELAVACLREKKSERPSMTDVVHELQRIIE 627
++ C +E+ +RP+ + ++ +L I E
Sbjct: 255 -----QIMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 248
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 304
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 248
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 304
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 331
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 387
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 448 WSFGILLTELTTKGR 462
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 248
Query: 414 AEQPLLIY-EYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ I EY++ G+L D L G+ + L + +A Q A +AY+ Y HR
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HR 304
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 136/274 (49%), Gaps = 25/274 (9%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG V+ G + VA+K+ + G + S + + E ++ +++H LV+L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
L++E++ +G L D+L + F T L + L E +AYL A + HRD
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC---VIHRD 128
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+ + N L+ ++ KV+DFG++R ST + + + PE + + + KSDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 534 SYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMS 593
S+GV++ E+ + K +R +V I R + PRL AS ++
Sbjct: 189 SFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--------LYKPRL----ASTHVY-- 234
Query: 594 LKLFSELAVACLREKKSERPSMTDVVHELQRIIE 627
++ C +E+ +RP+ + ++ +L I E
Sbjct: 235 -----QIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 136/274 (49%), Gaps = 25/274 (9%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG V+ G + VA+K+ + G + S + + E ++ +++H LV+L G C+E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
L++E++ +G L D+L + F T L + L E +AYL A + HRD
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC---VIHRD 126
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+ + N L+ ++ KV+DFG++R ST + + + PE + + + KSDV+
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 534 SYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMS 593
S+GV++ E+ + K +R +V I R + PRL AS ++
Sbjct: 187 SFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--------LYKPRL----ASTHVY-- 232
Query: 594 LKLFSELAVACLREKKSERPSMTDVVHELQRIIE 627
++ C +E+ +RP+ + ++ +L I E
Sbjct: 233 -----QIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 79
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY+ G+L D L G+ + L + ++ Q A +AY+ Y HR
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERMNYV---HR 135
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 196 WSFGILLTELTTKGR 210
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + YL S
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R K S H T A+ + ++ E +
Sbjct: 153 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 256
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 257 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 294
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 145/295 (49%), Gaps = 33/295 (11%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKGELQ----DGTVVAVKSAKVGNI-KSTQQVLNEV 393
KEL ATN S ++++G+G FGEV G L+ VA+K+ KVG K + L E
Sbjct: 11 KELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 394 GILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQ 453
I+ Q +H N++RL G +++ +++ E + NG+L L + F + + +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI--QLVGMLRG 126
Query: 454 TAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGLSHVSTCAQG 511
A + YL Y HRD+ + NIL++ + KV+DFGLSR+ + P ++ + +
Sbjct: 127 IASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 512 TLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNG 571
+ + PE + T SDV+SYG+VL E+++ + P SN
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP---------YWEMSNQ 228
Query: 572 AIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
+++ VD +G+ + L+ +L + C ++ ++ RP +V L ++I
Sbjct: 229 DVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 135/274 (49%), Gaps = 25/274 (9%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG V+ G + VA+K+ + G + S + + E ++ +++H LV+L G C+E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
L+ E++ +G L D+L + F T L + L E +AYL A + HRD
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC---VIHRD 129
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+ + N L+ ++ KV+DFG++R ST + + + PE + + + KSDV+
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 534 SYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMS 593
S+GV++ E+ + K +R +V I R + PRL AS ++
Sbjct: 190 SFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--------LYKPRL----ASTHVY-- 235
Query: 594 LKLFSELAVACLREKKSERPSMTDVVHELQRIIE 627
++ C RE+ +RP+ + ++ +L I E
Sbjct: 236 -----QIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 148/304 (48%), Gaps = 35/304 (11%)
Query: 332 PARIFH--LKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-K 384
P + H KEL ATN S ++++G+G FGEV G L + VA+K+ KVG K
Sbjct: 31 PTQTVHEFAKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTW 444
+ L E I+ Q +H N++RL G +++ +++ E + NG+L L + F +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ 148
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGL 502
+ + A + YL Y HRD+ + NIL++ + KV+DFGLSR+ + P
Sbjct: 149 LVGMLRGI--ASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
++ + + + + PE + T SDV+SYG+VL E+++ + P
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP------- 250
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
SN +++ VD +G+ + L+ +L + C ++ ++ RP +V L
Sbjct: 251 --YWEMSNQDVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 623 QRII 626
++I
Sbjct: 305 DKLI 308
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG G FGEV+ G T VA+K+ K G + S + L E ++ ++ H+ LV+L V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLY--AVV 79
Query: 414 AEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+E+P+ ++ EY+ G+L D L G+ + L + ++ Q A +AY+ Y HR
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERMNYV---HR 135
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+++ NIL+ ++ KVADFGL+RL + A+ + + PE + T KSDV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 533 YSYGVVLLELLTSQK 547
+S+G++L EL T +
Sbjct: 196 WSFGILLTELTTKGR 210
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + YL S
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKK 172
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R K S H T A+ + ++ E +
Sbjct: 173 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 276
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 277 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 314
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 33/283 (11%)
Query: 353 ILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++ L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 408 LGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
LG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + YL S +
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKKF 146
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYYRN 523
HRD+ + N +LD+ F KVADFGL+R K S H T A+ + ++ E +
Sbjct: 147 V---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 524 YQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQG 583
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 204 QKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLLQ 250
Query: 584 HEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 251 PEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 287
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + YL S
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKK 171
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R K S H T A+ + ++ E +
Sbjct: 172 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 275
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 276 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 313
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 33/283 (11%)
Query: 353 ILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++ L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 408 LGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
LG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + YL S +
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKKF 151
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYYRN 523
HRD+ + N +LD+ F KVADFGL+R K S H T A+ + ++ E +
Sbjct: 152 V---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 524 YQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQG 583
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 209 QKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLLQ 255
Query: 584 HEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 256 PEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 292
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + YL S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R K S H T A+ + ++ E +
Sbjct: 154 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 257
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 258 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + YL S
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYLASKK 151
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R K S H T A+ + ++ E +
Sbjct: 152 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 255
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 256 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 293
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 33/283 (11%)
Query: 353 ILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++ L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 408 LGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
LG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + YL S +
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKKF 149
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYYRN 523
HRD+ + N +LD+ F KVADFGL+R K S H T A+ + ++ E +
Sbjct: 150 V---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 524 YQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQG 583
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 207 QKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLLQ 253
Query: 584 HEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 254 PEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 290
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + YL S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R K S H T A+ + ++ E +
Sbjct: 154 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 257
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 258 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 135/286 (47%), Gaps = 37/286 (12%)
Query: 351 ERILGSGGFGEVYKGELQ----DGTVVAVKSAKVGNI-KSTQQVLNEVGILSQVNHKNLV 405
ER++G+G FGEV G L+ VA+K+ KVG K + L E I+ Q +H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYSSFNLTWSTRLRIALQTAEALAYLH 462
L G + +++ E++ NG L L G+++ L R A + YL
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR-----GIAAGMRYLA 162
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGLSHVSTCAQGTLGYLDPEY 520
Y HRD+ + NIL++ + KV+DFGLSR+ + P + +T + + + PE
Sbjct: 163 DMGYV---HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 521 YRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPR 580
+ + T SDV+SYG+V+ E+++ + + DV AI R P
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL----------PA 269
Query: 581 LQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
A ++ LM + C +++++ERP +V L ++I
Sbjct: 270 PMDCPAGLHQLM---------LDCWQKERAERPKFEQIVGILDKMI 306
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + YL S
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R K S H T A+ + ++ E +
Sbjct: 153 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 256
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 257 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 294
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 18/205 (8%)
Query: 352 RILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+ +G G FG+V G+ + G VAVK K N + Q L E +++Q+ H NLV+LLG
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 412 VEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
VE + L ++ EY+A G+L D+L + S L L+ +L EA+ YL +
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFV--- 124
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS 530
HRD+ + N+L+ +D +KV+DFGL++ A S + + + PE R + + KS
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 531 DVYSYGVVLLELLTSQKAIDFSRDP 555
DV+S+G++L E+ + F R P
Sbjct: 181 DVWSFGILLWEIYS------FGRVP 199
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 10/196 (5%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
LG+G FGEV+ G T VA+K+ K G + S + L E I+ ++ H LV+L V
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTM-SPESFLEEAQIMKKLKHDKLVQLY--AVV 73
Query: 414 AEQPL-LIYEYIANGTLHDHLH-GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+E+P+ ++ EY+ G+L D L G+ + L + +A Q A +AY+ Y H
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRALKL--PNLVDMAAQVAAGMAYIERMNYI---H 128
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSD 531
RD++S NIL+ + K+ADFGL+RL + A+ + + PE + T KSD
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 532 VYSYGVVLLELLTSQK 547
V+S+G++L EL+T +
Sbjct: 189 VWSFGILLTELVTKGR 204
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 140/284 (49%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + +L S
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R L K S H T A+ + ++ E +
Sbjct: 155 FV---HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 258
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 259 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 296
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 18/205 (8%)
Query: 352 RILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+ +G G FG+V G+ + G VAVK K N + Q L E +++Q+ H NLV+LLG
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 412 VEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
VE + L ++ EY+A G+L D+L + S L L+ +L EA+ YL +
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFV--- 139
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS 530
HRD+ + N+L+ +D +KV+DFGL++ A S + + + PE R + + KS
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 531 DVYSYGVVLLELLTSQKAIDFSRDP 555
DV+S+G++L E+ + F R P
Sbjct: 196 DVWSFGILLWEIYS------FGRVP 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 18/205 (8%)
Query: 352 RILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+ +G G FG+V G+ + G VAVK K N + Q L E +++Q+ H NLV+LLG
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 412 VEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
VE + L ++ EY+A G+L D+L + S L L+ +L EA+ YL +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFV--- 311
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS 530
HRD+ + N+L+ +D +KV+DFGL++ A S + + + PE R + + KS
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 531 DVYSYGVVLLELLTSQKAIDFSRDP 555
DV+S+G++L E+ + F R P
Sbjct: 368 DVWSFGILLWEIYS------FGRVP 386
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 136/272 (50%), Gaps = 25/272 (9%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG V+ G + VA+K+ + G + S + + E ++ +++H LV+L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
L++E++ +G L D+L + F T L + L E +AYL A+ + HRD
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAS---VIHRD 128
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
+ + N L+ ++ KV+DFG++R ST + + + PE + + + KSDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 534 SYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMS 593
S+GV++ E+ + K +R +V I R + PRL AS ++
Sbjct: 189 SFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--------LYKPRL----ASTHVY-- 234
Query: 594 LKLFSELAVACLREKKSERPSMTDVVHELQRI 625
++ C +E+ +RP+ + ++ +L I
Sbjct: 235 -----QIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 111/205 (54%), Gaps = 18/205 (8%)
Query: 352 RILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+ +G G FG+V G+ + G VAVK K N + Q L E +++Q+ H NLV+LLG
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 412 VEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
VE + L ++ EY+A G+L D+L + S L L+ +L EA+ YL +
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFV--- 130
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS 530
HRD+ + N+L+ +D +KV+DFGL++ A S + + + PE R + KS
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 531 DVYSYGVVLLELLTSQKAIDFSRDP 555
DV+S+G++L E+ + F R P
Sbjct: 187 DVWSFGILLWEIYS------FGRVP 205
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 142/286 (49%), Gaps = 37/286 (12%)
Query: 351 ERILGSGGFGEVYKGELQ----DGTVVAVKSAKVGNI-KSTQQVLNEVGILSQVNHKNLV 405
ER++G+G FGEV G L+ VA+K+ KVG K + L E I+ Q +H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYSSFNLTWSTRLRIALQTAEALAYLH 462
L G +++ +++ EY+ NG+L L G+++ L R + + YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR-----GISAGMKYLS 141
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGLSHVSTCAQGTLGYLDPEY 520
Y HRD+ + NIL++ + KV+DFGLSR+ + P ++ + + + + PE
Sbjct: 142 DMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 198
Query: 521 YRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPR 580
+ T SDV+SYG+V+ E+++ + P +N +++ V+
Sbjct: 199 IAFRKFTSASDVWSYGIVMWEVVS------YGERP---------YWEMTNQDVIKAVE-- 241
Query: 581 LQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
+G+ + L+ +L + C +++++ RP ++V+ L ++I
Sbjct: 242 -EGYRLPSPMDCPAALY-QLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 138/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + +L S
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASKK 212
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA---KPGLSHVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R + H T A+ + ++ E +
Sbjct: 213 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 316
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 317 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 354
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 138/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + +L S
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASKK 158
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA---KPGLSHVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R + H T A+ + ++ E +
Sbjct: 159 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 262
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 263 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 300
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 138/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + +L S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA---KPGLSHVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R + H T A+ + ++ E +
Sbjct: 154 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 257
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 258 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 138/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + +L S
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASKK 151
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA---KPGLSHVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R + H T A+ + ++ E +
Sbjct: 152 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 255
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 256 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 293
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 138/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + +L S
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA---KPGLSHVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R + H T A+ + ++ E +
Sbjct: 155 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 258
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 259 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 296
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 138/284 (48%), Gaps = 33/284 (11%)
Query: 352 RILGSGGFGEVYKGEL--QDGTVV--AVKSA-KVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++G G FG VY G L DG + AVKS ++ +I Q L E I+ +H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 407 LLGCCVEAE-QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LLG C+ +E PL++ Y+ +G L + + + + N T + LQ A+ + +L S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA---KPGLSHVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N +LD+ F KVADFGL+R + H T A+ + ++ E +
Sbjct: 154 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ T KSDV+S+GV+L EL+T + D + ++ +Y+ Q RL
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQGR-----------RLL 257
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRII 626
E + L E+ + C K RPS +++V + I
Sbjct: 258 QPEYCPDPLY------EVMLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 147/304 (48%), Gaps = 35/304 (11%)
Query: 332 PARIFH--LKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-K 384
P + H KEL ATN S ++++G+G FGEV G L + VA+K+ KVG K
Sbjct: 31 PTQTVHEFAKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTW 444
+ L E I+ Q +H N++RL G +++ +++ E + NG+L L + F +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ 148
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGL 502
+ + A + YL HRD+ + NIL++ + KV+DFGLSR+ + P
Sbjct: 149 LVGMLRGI--ASGMKYLSDMGAV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
++ + + + + PE + T SDV+SYG+VL E+++ + P
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERP------- 250
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
SN +++ VD +G+ + L+ +L + C ++ ++ RP +V L
Sbjct: 251 --YWEMSNQDVIKAVD---EGYRLPPPMDCPAALY-QLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 623 QRII 626
++I
Sbjct: 305 DKLI 308
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 37/293 (12%)
Query: 351 ERILGSGGFGEVYKGELQ----DGTVVAVKSAKVGNI-KSTQQVLNEVGILSQVNHKNLV 405
E+++G G FGEV G L+ VA+K+ K G K + L+E I+ Q +H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYSSFNLTWSTRLRIALQTAEALAYLH 462
L G + + ++I EY+ NG+L L G+++ L R + YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLS 127
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGLSHVSTCAQGTLGYLDPEY 520
+Y HRD+ + NIL++ + KV+DFG+SR+ + P ++ + + + + PE
Sbjct: 128 DMSYV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 521 YRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPR 580
+ T SDV+SYG+V+ E+++ + + DV AI R + P
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYR---------LPPP 235
Query: 581 LQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQEK 633
+ A +L + C ++++S+RP +V+ L ++I N K
Sbjct: 236 MDCPIA----------LHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLK 278
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G FGEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + ++ L +A Q + A+ YL + HR
Sbjct: 78 REPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFI---HR 133
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 533 YSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILM 592
+++GV+L E+ T + DP V + R ME R +G V LM
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR------ME----RPEGCPEKVYELM 243
Query: 593 SLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
AC + S+RPS E+ + E + QE +S++V E
Sbjct: 244 R---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 280
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 37/293 (12%)
Query: 351 ERILGSGGFGEVYKGELQ----DGTVVAVKSAKVGNI-KSTQQVLNEVGILSQVNHKNLV 405
E+++G G FGEV G L+ VA+K+ K G K + L+E I+ Q +H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYSSFNLTWSTRLRIALQTAEALAYLH 462
L G + + ++I EY+ NG+L L G+++ L R + YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLS 133
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGLSHVSTCAQGTLGYLDPEY 520
+Y HRD+ + NIL++ + KV+DFG+SR+ + P ++ + + + + PE
Sbjct: 134 DMSYV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 521 YRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPR 580
+ T SDV+SYG+V+ E+++ + + DV AI R + P
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYR---------LPPP 241
Query: 581 LQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQEK 633
+ A +L + C ++++S+RP +V+ L ++I N K
Sbjct: 242 MDCPIA----------LHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLK 284
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 12/198 (6%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVE 413
+GSG FG VYKG+ V + + Q NEV +L + H N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 414 AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
+ ++ ++ +L+ HLH + + F + + IA QTA+ + YLH+ I HRD
Sbjct: 104 -DNLAIVTQWCEGSSLYKHLHVQETKFQMF--QLIDIARQTAQGMDYLHAKN---IIHRD 157
Query: 474 VKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYR---NYQLTD 528
+KS NI L + K+ DFGL+ + K S Q G++ ++ PE R N +
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLATV-KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 529 KSDVYSYGVVLLELLTSQ 546
+SDVYSYG+VL EL+T +
Sbjct: 217 QSDVYSYGIVLYELMTGE 234
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 134/271 (49%), Gaps = 30/271 (11%)
Query: 351 ERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
E ++G G FG V K + + VA+K ++ + + + E+ LS+VNH N+V+L G
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 411 CVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPI 469
C+ P+ L+ EY G+L++ LHG T + + LQ ++ +AYLHS +
Sbjct: 70 CL---NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 470 YHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD 528
HRD+K N+LL K+ DFG + + +H+ T +G+ ++ PE + ++
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THM-TNNKGSAAWMAPEVFEGSNYSE 182
Query: 529 KSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
K DV+S+G++L E++T +K D P A + NG P ++ +
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEIGGP-----AFRIMWAVHNG----TRPPLIKNLPKPI 233
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVV 619
LM+ C + S+RPSM ++V
Sbjct: 234 ESLMT---------RCWSKDPSQRPSMEEIV 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 134/271 (49%), Gaps = 30/271 (11%)
Query: 351 ERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
E ++G G FG V K + + VA+K ++ + + + E+ LS+VNH N+V+L G
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 411 CVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPI 469
C+ P+ L+ EY G+L++ LHG T + + LQ ++ +AYLHS +
Sbjct: 71 CL---NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 470 YHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD 528
HRD+K N+LL K+ DFG + + +H+ T +G+ ++ PE + ++
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THM-TNNKGSAAWMAPEVFEGSNYSE 183
Query: 529 KSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
K DV+S+G++L E++T +K D P A + NG P ++ +
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEIGGP-----AFRIMWAVHNG----TRPPLIKNLPKPI 234
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVV 619
LM+ C + S+RPSM ++V
Sbjct: 235 ESLMT---------RCWSKDPSQRPSMEEIV 256
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 351 ERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
E+ LG+G FGEV+ T VAVK+ K G++ S + L E ++ + H LV+L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKL-HA 77
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
V E +I E++A G+L D L S + + Q AE +A++ Y
Sbjct: 78 VVTKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRNYI--- 133
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS 530
HRD+++ NIL+ K+ADFGL+R+ + A+ + + PE T KS
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 531 DVYSYGVVLLELLT 544
DV+S+G++L+E++T
Sbjct: 194 DVWSFGILLMEIVT 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 135/285 (47%), Gaps = 29/285 (10%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + ++ L +A Q + A+ YL + HR
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFI---HR 133
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 533 YSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILM 592
+++GV+L E+ T + DP V + R ME R +G V LM
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR------ME----RPEGCPEKVYELM 243
Query: 593 SLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQEKVSND 637
AC + S+RPS E+ + E + QE +D
Sbjct: 244 R---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISD 275
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 351 ERILGSGGFGEVYKGEL------QDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+R LG G FG+V+ E QD +VAVK+ K + + + E +L+ + H+++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSF--------NLTWSTRLRIALQT 454
V+ G CVE + ++++EY+ +G L+ L HG + LT S L IA Q
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTL 513
A + YL S + HRD+ + N L+ ++ K+ DFG+SR + V +
Sbjct: 138 AAGMVYLASQHFV---HRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 514 GYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQK 547
++ PE + T +SDV+S GVVL E+ T K
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + ++ L +A Q + A+ YL + HR
Sbjct: 78 REPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFI---HR 133
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 533 YSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILM 592
+++GV+L E+ T + DP V + R ME R +G V LM
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR------ME----RPEGCPEKVYELM 243
Query: 593 SLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
AC + S+RPS E+ + E + QE +S++V E
Sbjct: 244 R---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 280
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 351 ERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-KSTQQVLNEVGILSQVNHKNLV 405
E+I+GSG GEV G L Q VA+K+ K G + + L+E I+ Q +H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYSSFNLTWSTRLRIALQTAEALAYLH 462
RL G +++ EY+ NG+L L G+++ L R + YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR-----GVGAGMRYLS 168
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGLSHVSTCAQGTLGYLDPEY 520
Y HRD+ + N+L+D + KV+DFGLSR+ + P ++ +T + + + PE
Sbjct: 169 DLGYV---HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 521 YRNYQLTDKSDVYSYGVVLLELL 543
+ SDV+S+GVV+ E+L
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 145/317 (45%), Gaps = 46/317 (14%)
Query: 336 FHLKELKKATNGFSKE---------RILGSGGFGEVYKGELQ----DGTVVAVKSAKVG- 381
F ++ +A F+KE +++G G FGEV G L+ VA+K+ K G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 382 NIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYS 438
K + L+E I+ Q +H N++ L G + + ++I EY+ NG+L L G+++
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
L R + YL + HRD+ + NIL++ + KV+DFG+SR+
Sbjct: 130 VIQLVGMLR-----GIGSGMKYLSDMSAV---HRDLAARNILVNSNLVCKVSDFGMSRVL 181
Query: 499 K--PGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPD 556
+ P ++ + + + + PE + T SDV+SYG+V+ E+++ + +
Sbjct: 182 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 241
Query: 557 DVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMT 616
DV AI R + P + A +L + C ++++S+RP
Sbjct: 242 DVIKAIEEGYR---------LPPPMDCPIA----------LHQLMLDCWQKERSDRPKFG 282
Query: 617 DVVHELQRIIEIVNQEK 633
+V+ L ++I N K
Sbjct: 283 QIVNMLDKLIRNPNSLK 299
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 6/217 (2%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQ 387
++ KP + + + E+ LG+G FGEV+ T VAVK+ K G++ S +
Sbjct: 170 MSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVE 228
Query: 388 QVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
L E ++ + H LV+L V E +I E++A G+L D L S
Sbjct: 229 AFLAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKL 286
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVST 507
+ + Q AE +A++ Y HRD+++ NIL+ K+ADFGL+R+ +
Sbjct: 287 IDFSAQIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343
Query: 508 CAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
A+ + + PE T KSDV+S+G++L+E++T
Sbjct: 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 145/319 (45%), Gaps = 48/319 (15%)
Query: 336 FHLKELKKATNGFSKE---------RILGSGGFGEVYKGELQ----DGTVVAVKSAKVGN 382
F ++ +A F+KE +++G+G FGEV G L+ VA+K+ K G
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 383 I-KSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYS 438
K + L+E I+ Q +H N++ L G ++ ++I E++ NG+L L G+++
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
L R A + YL Y HRD+ + NIL++ + KV+DFGLSR
Sbjct: 134 VIQLVGMLR-----GIAAGMKYLADMNYV---HRDLAARNILVNSNLVCKVSDFGLSRFL 185
Query: 499 KPGLSHVS-TCAQG---TLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ S + T A G + + PE + + T SDV+SYG+V+ E+++ + +
Sbjct: 186 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 245
Query: 555 PDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPS 614
DV AI R + P + A +L + C ++ ++ RP
Sbjct: 246 NQDVINAIEQDYR---------LPPPMDCPSA----------LHQLMLDCWQKDRNHRPK 286
Query: 615 MTDVVHELQRIIEIVNQEK 633
+V+ L ++I N K
Sbjct: 287 FGQIVNTLDKMIRNPNSLK 305
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 351 ERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI-KSTQQVLNEVGILSQVNHKNLV 405
E+I+GSG GEV G L Q VA+K+ K G + + L+E I+ Q +H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYSSFNLTWSTRLRIALQTAEALAYLH 462
RL G +++ EY+ NG+L L G+++ L R + YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR-----GVGAGMRYLS 168
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--PGLSHVSTCAQGTLGYLDPEY 520
Y HRD+ + N+L+D + KV+DFGLSR+ + P + +T + + + PE
Sbjct: 169 DLGYV---HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 521 YRNYQLTDKSDVYSYGVVLLELL 543
+ SDV+S+GVV+ E+L
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV 399
ELK+ KE LGSG FG V G+ + VAVK K G++ S + E + ++
Sbjct: 4 ELKREEITLLKE--LGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKL 60
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEA 457
+H LV+ G C + ++ EYI+NG L ++L HGK L S L + E
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGK----GLEPSQLLEMCYDVCEG 116
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
+A+L S + HRD+ + N L+D D KV+DFG++R S + + +
Sbjct: 117 MAFLESHQFI---HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSA 173
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVV 577
PE + ++ + KSDV+++G+++ E+ + K P D +Y + EVV
Sbjct: 174 PEVFHYFKYSSKSDVWAFGILMWEVFSLGKM------PYD----LYTNS--------EVV 215
Query: 578 DPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIE 627
QGH L S ++ ++ +C E +RP+ ++ ++ + E
Sbjct: 216 LKVSQGHRLYRPHLASDTIY-QIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 136
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 197 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 242
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 243 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 283
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + ++ L +A Q + A+ YL + HR
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFI---HR 140
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 246
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 247 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 287
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + ++ L +A Q + A+ YL + HR
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFI---HR 135
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 241
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 242 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 282
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 330 GKPAR---IFHLKELKKATNGFSKERILGSGGFGEVY---KGELQDGT--VVAVKSAKVG 381
G PA +FH + LKK R LG G FG+V DGT +VAVK+ K
Sbjct: 2 GSPASDPTVFHKRYLKKI-------RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD 54
Query: 382 -NIKSTQQVLNEVGILSQVNHKNLVRLLGCCV-EAEQPL-LIYEYIANGTLHDHLHGKYS 438
+ E+ IL + H+++++ GCC + E+ L L+ EY+ G+L D+L
Sbjct: 55 CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----P 110
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
++ + L A Q E +AYLHS Y HR++ + N+LLD+D K+ DFGL++
Sbjct: 111 RHSIGLAQLLLFAQQICEGMAYLHSQHYI---HRNLAARNVLLDNDRLVKIGDFGLAKAV 167
Query: 499 KPGLSHVSTCAQGT--LGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G + G + + PE + Y+ SDV+S+GV L ELLT
Sbjct: 168 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 30/285 (10%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
F KE LG+G FG V G+ + VA+K K G++ S + + E ++ ++H+ LV+L
Sbjct: 28 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 84
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
G C + +I EY+ANG L ++L F L + EA+ YL S +
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL 142
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
HRD+ + N L++D KV+DFGLSR S ++ + + PE + +
Sbjct: 143 ---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 528 DKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEAS 587
KSD++++GV++ E+ + L +R +N E + QG
Sbjct: 200 SKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETAEHI---AQGLRLY 241
Query: 588 VNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE 632
L S K+++ + +C EK ERP+ + L I++++++E
Sbjct: 242 RPHLASEKVYT-IMYSCWHEKADERPTFKIL---LSNILDVMDEE 282
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + ++ L +A Q + A+ YL + HR
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFI---HR 135
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 241
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 242 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 282
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + ++ L +A Q + A+ YL + HR
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFI---HR 135
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 241
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 242 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 282
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + ++ L +A Q + A+ YL + HR
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFI---HR 135
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 241
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 242 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 282
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 82 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 137
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 243
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 244 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 284
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 81 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 136
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 197 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 242
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 243 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 283
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 140
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 246
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 247 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 287
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 30/285 (10%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
F KE LG+G FG V G+ + VA+K K G++ S + + E ++ ++H+ LV+L
Sbjct: 12 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 68
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
G C + +I EY+ANG L ++L F L + EA+ YL S +
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL 126
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
HRD+ + N L++D KV+DFGLSR S ++ + + PE + +
Sbjct: 127 ---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 528 DKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEAS 587
KSD++++GV++ E+ + L +R +N E + QG
Sbjct: 184 SKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETAEHI---AQGLRLY 225
Query: 588 VNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE 632
L S K+++ + +C EK ERP+ + L I++++++E
Sbjct: 226 RPHLASEKVYT-IMYSCWHEKADERPTFKIL---LSNILDVMDEE 266
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 93 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 148
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 209 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 254
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 255 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 295
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 30/285 (10%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
F KE LG+G FG V G+ + VA+K K G++ S + + E ++ ++H+ LV+L
Sbjct: 28 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 84
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
G C + +I EY+ANG L ++L F L + EA+ YL S +
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL 142
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
HRD+ + N L++D KV+DFGLSR S ++ + + PE + +
Sbjct: 143 ---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 528 DKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEAS 587
KSD++++GV++ E+ + L +R +N E + QG
Sbjct: 200 SKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETAEHI---AQGLRLY 241
Query: 588 VNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE 632
L S K+++ + +C EK ERP+ + L I++++++E
Sbjct: 242 RPHLASEKVYT-IMYSCWHEKADERPTFKIL---LSNILDVMDEE 282
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 6/192 (3%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 140
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 533 YSYGVVLLELLT 544
+++GV+L E+ T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 30/285 (10%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
F KE LG+G FG V G+ + VA+K K G++ S + + E ++ ++H+ LV+L
Sbjct: 8 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 64
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
G C + +I EY+ANG L ++L F L + EA+ YL S +
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL 122
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
HRD+ + N L++D KV+DFGLSR S ++ + + PE + +
Sbjct: 123 ---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 528 DKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEAS 587
KSD++++GV++ E+ + L +R +N E + QG
Sbjct: 180 SKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETAEHI---AQGLRLY 221
Query: 588 VNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE 632
L S K+++ + +C EK ERP+ + L I++++++E
Sbjct: 222 RPHLASEKVYT-IMYSCWHEKADERPTFKIL---LSNILDVMDEE 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 82 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 137
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 243
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 244 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 284
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 38/294 (12%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 82 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 137
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 533 YSYGVVLLEL----LTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEASV 588
+++GV+L E+ ++ ID S+ V + ME R +G V
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRME----RPEGCPEKV 243
Query: 589 NILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
LM AC + S+RPS E+ + E + QE +S++V E
Sbjct: 244 YELMR---------ACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 284
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 6/192 (3%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 140
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 533 YSYGVVLLELLT 544
+++GV+L E+ T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 111/225 (49%), Gaps = 25/225 (11%)
Query: 330 GKPARIFHLKELKKATNGFSKERILGSGGFGEVY---KGELQDGT--VVAVKSAKV-GNI 383
G P +FH + LKK R LG G FG+V DGT +VAVK+ K
Sbjct: 23 GDPT-VFHKRYLKKI-------RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGP 74
Query: 384 KSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFN 441
+ E+ IL + H+++++ GCC +A L+ EY+ G+L D+L +
Sbjct: 75 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHS 130
Query: 442 LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPG 501
+ + L A Q E +AYLH+ Y HRD+ + N+LLD+D K+ DFGL++ G
Sbjct: 131 IGLAQLLLFAQQICEGMAYLHAQHYI---HRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187
Query: 502 LSHVSTCAQGT--LGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G + + PE + Y+ SDV+S+GV L ELLT
Sbjct: 188 HEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 330 GKPAR---IFHLKELKKATNGFSKERILGSGGFGEVY---KGELQDGT--VVAVKSAKVG 381
G PA +FH + LKK R LG G FG+V DGT +VAVK+ K
Sbjct: 2 GSPASDPTVFHKRYLKKI-------RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD 54
Query: 382 -NIKSTQQVLNEVGILSQVNHKNLVRLLGCCV-EAEQPL-LIYEYIANGTLHDHLHGKYS 438
+ E+ IL + H+++++ GCC + E+ L L+ EY+ G+L D+L
Sbjct: 55 CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----P 110
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
++ + L A Q E +AYLH+ Y HR++ + N+LLD+D K+ DFGL++
Sbjct: 111 RHSIGLAQLLLFAQQICEGMAYLHAQHYI---HRNLAARNVLLDNDRLVKIGDFGLAKAV 167
Query: 499 KPGLSHVSTCAQGT--LGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G + G + + PE + Y+ SDV+S+GV L ELLT
Sbjct: 168 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 6/192 (3%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 140
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 533 YSYGVVLLELLT 544
+++GV+L E+ T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 6/192 (3%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 84 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 139
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 533 YSYGVVLLELLT 544
+++GV+L E+ T
Sbjct: 200 WAFGVLLWEIAT 211
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 30/285 (10%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
F KE LG+G FG V G+ + VA+K K G++ S + + E ++ ++H+ LV+L
Sbjct: 19 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 75
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
G C + +I EY+ANG L ++L F L + EA+ YL S +
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL 133
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
HRD+ + N L++D KV+DFGLSR S ++ + + PE + +
Sbjct: 134 ---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 528 DKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEAS 587
KSD++++GV++ E+ + L +R +N E + QG
Sbjct: 191 SKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETAEHI---AQGLRLY 232
Query: 588 VNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE 632
L S K+++ + +C EK ERP+ + L I++++++E
Sbjct: 233 RPHLASEKVYT-IMYSCWHEKADERPTFKIL---LSNILDVMDEE 273
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 6/192 (3%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 135
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 533 YSYGVVLLELLT 544
+++GV+L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 6/192 (3%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 135
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 533 YSYGVVLLELLT 544
+++GV+L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQ 387
++ KP + + + E+ LG+G FGEV+ T VAVK+ K G++ S +
Sbjct: 164 MSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVE 222
Query: 388 QVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
L E ++ + H LV+L V E +I E++A G+L D L S
Sbjct: 223 AFLAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKL 280
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVST 507
+ + Q AE +A++ Y HRD+++ NIL+ K+ADFGL+R+
Sbjct: 281 IDFSAQIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVG--------- 328
Query: 508 CAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
A+ + + PE T KSDV+S+G++L+E++T
Sbjct: 329 -AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 145/296 (48%), Gaps = 34/296 (11%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 326 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 381
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
++ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 533 YSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVV--DPRLQGHEASVNI 590
+++GV+L E+ T S P I +SQ + E++ D R++ E
Sbjct: 442 WAFGVLLWEIAT----YGMSPYP-----GIDLSQ------VYELLEKDYRMERPEGCPE- 485
Query: 591 LMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVETAPE 645
K++ EL AC + S+RPS E+ + E + QE +S++V E E
Sbjct: 486 ----KVY-ELMRACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKELGKE 532
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 136/284 (47%), Gaps = 30/284 (10%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
F KE LG+G FG V G+ + VA+K K G++ S + + E ++ ++H+ LV+L
Sbjct: 13 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 69
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
G C + +I EY+ANG L ++L F L + EA+ YL S +
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL 127
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
HRD+ + N L++D KV+DFGLSR S ++ + + PE + +
Sbjct: 128 ---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 528 DKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEAS 587
KSD++++GV++ E+ + L +R +N E + L+ +
Sbjct: 185 SKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETAEHIAQGLRLYRPH 229
Query: 588 VNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQ 631
L S K+++ + +C EK ERP+ + L I++++++
Sbjct: 230 ---LASEKVYT-IMYSCWHEKADERPTFKIL---LSNILDVMDE 266
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 145/296 (48%), Gaps = 34/296 (11%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + + L +A Q + A+ YL + HR
Sbjct: 284 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HR 339
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
++ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 533 YSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVV--DPRLQGHEASVNI 590
+++GV+L E+ T S P I +SQ + E++ D R++ E
Sbjct: 400 WAFGVLLWEIAT----YGMSPYP-----GIDLSQ------VYELLEKDYRMERPEGCPE- 443
Query: 591 LMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVETAPE 645
K++ EL AC + S+RPS E+ + E + QE +S++V E E
Sbjct: 444 ----KVY-ELMRACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKELGKE 490
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 34/292 (11%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY+G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I E++ G L D+L + + ++ L +A Q + A+ YL + HR
Sbjct: 287 REPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFI---HR 342
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
++ + N L+ ++ KVADFGLSRL A+ + + PE + + KSDV
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 533 YSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVV--DPRLQGHEASVNI 590
+++GV+L E+ T S P I +SQ + E++ D R++ E
Sbjct: 403 WAFGVLLWEIAT----YGMSPYP-----GIDLSQ------VYELLEKDYRMERPEGCPE- 446
Query: 591 LMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQE-KVSNDVNVE 641
K++ EL AC + S+RPS E+ + E + QE +S++V E
Sbjct: 447 ----KVY-ELMRACWQWNPSDRPSFA----EIHQAFETMFQESSISDEVEKE 489
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 6/192 (3%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +GEVY G + ++ VAVK+ K ++ ++ L E ++ ++ H NLV+LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
++ EY+ G L D+L + + +T L +A Q + A+ YL + HR
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLR-ECNREEVTAVVLLYMATQISSAMEYLEKKNFI---HR 154
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+ + N L+ ++ KVADFGLSRL A+ + + PE + KSDV
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 533 YSYGVVLLELLT 544
+++GV+L E+ T
Sbjct: 215 WAFGVLLWEIAT 226
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 39/295 (13%)
Query: 351 ERILGSGGFGEVYKGELQ----DGTVVAVKSAKVGNI-KSTQQVLNEVGILSQVNHKNLV 405
E+++G+G FGEV G L+ VA+K+ K G K + L+E I+ Q +H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYSSFNLTWSTRLRIALQTAEALAYLH 462
L G ++ ++I E++ NG+L L G+++ L R A + YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR-----GIAAGMKYLA 126
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVS-TCAQG---TLGYLDP 518
Y HR + + NIL++ + KV+DFGLSR + S + T A G + + P
Sbjct: 127 DMNYV---HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD 578
E + + T SDV+SYG+V+ E+++ + + DV AI R +
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYR---------LP 234
Query: 579 PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVNQEK 633
P + A +L + C ++ ++ RP +V+ L ++I N K
Sbjct: 235 PPMDCPSA----------LHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLK 279
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 351 ERILGSGGFGEVYKGELQ----DGTVVAVKSAKVGNI-KSTQQVLNEVGILSQVNHKNLV 405
E ++G+G FGEV +G L+ + VA+K+ K G + ++ L+E I+ Q H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYSSFNLTWSTRLRIALQTAEALAYLH 462
RL G + +++ E++ NG L L G+++ L R A + YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYLA 135
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH-VSTCAQG---TLGYLDP 518
+Y HRD+ + NIL++ + KV+DFGLSR + S T + G + + P
Sbjct: 136 EMSYV---HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T SD +SYG+V+ E+++
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 20/206 (9%)
Query: 351 ERILGSGGFGEVYKGELQ----DGTVVAVKSAKVGNI-KSTQQVLNEVGILSQVNHKNLV 405
E ++G+G FGEV +G L+ + VA+K+ K G + ++ L+E I+ Q H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYSSFNLTWSTRLRIALQTAEALAYLH 462
RL G + +++ E++ NG L L G+++ L R A + YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYLA 133
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVS-TCAQG---TLGYLDP 518
+Y HRD+ + NIL++ + KV+DFGLSR + S + T + G + + P
Sbjct: 134 EMSYV---HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T SD +SYG+V+ E+++
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKS 385
A ++ E + A + R LG G FG VY KG ++D T VA+K+ + +++
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 65
Query: 386 TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN---- 441
+ LNE ++ + N ++VRLLG + + L+I E + G L +L
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 442 ---LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
+ S +++A + A+ +AYL++ + HRD+ + N ++ +DF K+ DFG++R
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR-- 180
Query: 499 KPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ +G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 181 --DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKS 385
A +F E + A + R LG G FG VY KG ++D T VA+K+ + +++
Sbjct: 3 ADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 62
Query: 386 TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN---- 441
+ LNE ++ + N ++VRLLG + + L+I E + G L +L
Sbjct: 63 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 122
Query: 442 ---LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
+ S +++A + A+ +AYL++ + HRD+ + N ++ +DF K+ DFG++R
Sbjct: 123 LAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR-- 177
Query: 499 KPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ +G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 178 --DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 126/268 (47%), Gaps = 27/268 (10%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
F KE LG+G FG V G+ + VA+K K G++ S + + E ++ ++H+ LV+L
Sbjct: 13 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 69
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
G C + +I EY+ANG L ++L F L + EA+ YL S +
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL 127
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
HRD+ + N L++D KV+DFGLSR S ++ + + PE + +
Sbjct: 128 ---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 528 DKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQGHEAS 587
KSD++++GV++ E+ + L +R +N E + QG
Sbjct: 185 SKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETAEHI---AQGLRLY 226
Query: 588 VNILMSLKLFSELAVACLREKKSERPSM 615
L S K+++ + +C EK ERP+
Sbjct: 227 RPHLASEKVYT-IMYSCWHEKADERPTF 253
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 354 LGSGGFGEVYKGEL------QDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
LG G FG+V+ E QD +VAVK+ K + + Q E +L+ + H+++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSF----------NLTWSTRLRIALQTA 455
G C E L+++EY+ +G L+ L HG + L L +A Q A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ YL + HRD+ + N L+ K+ DFG+SR + V +
Sbjct: 146 AGMVYLAGLHFV---HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQK 547
++ PE + T +SDV+S+GVVL E+ T K
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 235
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 26/224 (11%)
Query: 340 ELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKSTQQVLNE 392
E + A + R LG G FG VY KG ++D T VA+K+ + +++ + LNE
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 393 VGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWS 445
++ + N ++VRLLG + + L+I E + G L +L + S
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 446 TRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV 505
+++A + A+ +AYL++ + HRD+ + N ++ +DF K+ DFG++R +
Sbjct: 124 KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR----DIXET 176
Query: 506 STCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 354 LGSGGFGEVYKGEL------QDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
LG G FG+V+ E QD +VAVK+ K + + Q E +L+ + H+++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSF----------NLTWSTRLRIALQTA 455
G C E L+++EY+ +G L+ L HG + L L +A Q A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ YL + HRD+ + N L+ K+ DFG+SR + V +
Sbjct: 140 AGMVYLAGLHFV---HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQK 547
++ PE + T +SDV+S+GVVL E+ T K
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 229
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 25/231 (10%)
Query: 337 HLKELKKATNGFSKERILGSGGFGEVYKGE------LQDGTVVAVKSAKVGNIKSTQQVL 390
H++ +K+ +E LG G FG+V+ E +D +VAVK+ K + + +
Sbjct: 8 HVQHIKRRDIVLKRE--LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQ 65
Query: 391 NEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHL--HG-----------KY 437
E +L+ + H+++V+ G C + + ++++EY+ +G L+ L HG +
Sbjct: 66 REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQ 125
Query: 438 SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR- 496
+ L S L IA Q A + YL S + HRD+ + N L+ + K+ DFG+SR
Sbjct: 126 AKGELGLSQMLHIASQIASGMVYLASQHFV---HRDLATRNCLVGANLLVKIGDFGMSRD 182
Query: 497 LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQK 547
+ V + ++ PE + T +SDV+S+GV+L E+ T K
Sbjct: 183 VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 233
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 354 LGSGGFGEVYKGEL------QDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
LG G FG+V+ E QD +VAVK+ K + + Q E +L+ + H+++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSF----------NLTWSTRLRIALQTA 455
G C E L+++EY+ +G L+ L HG + L L +A Q A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ YL + HRD+ + N L+ K+ DFG+SR + V +
Sbjct: 169 AGMVYLAGLHFV---HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQK 547
++ PE + T +SDV+S+GVVL E+ T K
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKS 385
A ++ E + A + R LG G FG VY KG ++D T VA+K+ + +++
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 64
Query: 386 TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN---- 441
+ LNE ++ + N ++VRLLG + + L+I E + G L +L
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 442 ---LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
+ S +++A + A+ +AYL++ + HRD+ + N ++ +DF K+ DFG++R
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR-- 179
Query: 499 KPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ +G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 180 --DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 26/231 (11%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKS 385
A ++ E + A + R LG G FG VY KG ++D T VA+K+ + +++
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 71
Query: 386 TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN---- 441
+ LNE ++ + N ++VRLLG + + L+I E + G L +L +
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 131
Query: 442 ---LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
+ S +++A + A+ +AYL++ + HRD+ + N ++ +DF K+ DFG++R
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR-- 186
Query: 499 KPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ +G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 187 --DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKS 385
A ++ E + A + R LG G FG VY KG ++D T VA+K+ + +++
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 71
Query: 386 TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN---- 441
+ LNE ++ + N ++VRLLG + + L+I E + G L +L
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 131
Query: 442 ---LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
+ S +++A + A+ +AYL++ + HRD+ + N ++ +DF K+ DFG++R
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR-- 186
Query: 499 KPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ +G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 187 --DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKS 385
A ++ E + A + R LG G FG VY KG ++D T VA+K+ + +++
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 64
Query: 386 TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN---- 441
+ LNE ++ + N ++VRLLG + + L+I E + G L +L
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 442 ---LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
+ S +++A + A+ +AYL++ + HRD+ + N ++ +DF K+ DFG++R
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR-- 179
Query: 499 KPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ +G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 180 --DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 26/231 (11%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKS 385
A ++ E + A + R LG G FG VY KG ++D T VA+K+ + +++
Sbjct: 2 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 61
Query: 386 TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN---- 441
+ LNE ++ + N ++VRLLG + + L+I E + G L +L +
Sbjct: 62 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 442 ---LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
+ S +++A + A+ +AYL++ + HRD+ + N ++ +DF K+ DFG++R
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR-- 176
Query: 499 KPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ +G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 177 --DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 33/240 (13%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQVL 390
P RIF +L +LG G FG+ K + G V+ +K + ++ + L
Sbjct: 3 PHRIFRPSDLIHGE-------VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFL 55
Query: 391 NEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI 450
EV ++ + H N+++ +G + ++ I EYI GTL + S + WS R+
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQY--PWSQRVSF 113
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-------------- 496
A A +AYLHS I HRD+ S N L+ ++ N VADFGL+R
Sbjct: 114 AKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170
Query: 497 LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPD 556
L KP T G ++ PE +K DV+S+G+VL E++ A DPD
Sbjct: 171 LKKPDRKKRYTVV-GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA-----DPD 224
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKS 385
A ++ E + A + R LG G FG VY KG ++D T VA+K+ + +++
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 65
Query: 386 TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN---- 441
+ LNE ++ + N ++VRLLG + + L+I E + G L +L
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 442 ---LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
+ S +++A + A+ +AYL++ + HRD+ + N ++ +DF K+ DFG++R
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR-- 180
Query: 499 KPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ +G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 181 --DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 28/222 (12%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEVY---KGELQDGT--VVAVKSAKVG---NIKST 386
+FH + LKK R LG G FG+V DGT +VAVK+ K G ++S
Sbjct: 4 VFHKRYLKKI-------RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG 56
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTW 444
Q E+ IL + H+++V+ GCC + + L+ EY+ G+L D+L +
Sbjct: 57 WQ--REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGL 110
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH 504
+ L A Q E +AYLH+ Y HR + + N+LLD+D K+ DFGL++ G +
Sbjct: 111 AQLLLFAQQICEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 167
Query: 505 VSTCAQGT--LGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G + + PE + + SDV+S+GV L ELLT
Sbjct: 168 YRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 28/222 (12%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEVY---KGELQDGT--VVAVKSAKVG---NIKST 386
+FH + LKK R LG G FG+V DGT +VAVK+ K G ++S
Sbjct: 5 VFHKRYLKKI-------RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG 57
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTW 444
Q E+ IL + H+++V+ GCC + + L+ EY+ G+L D+L +
Sbjct: 58 WQ--REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGL 111
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH 504
+ L A Q E +AYLH+ Y HR + + N+LLD+D K+ DFGL++ G +
Sbjct: 112 AQLLLFAQQICEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 168
Query: 505 VSTCAQGT--LGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G + + PE + + SDV+S+GV L ELLT
Sbjct: 169 YRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKS 385
A ++ E + A + R LG G FG VY KG ++D T VA+K+ + +++
Sbjct: 34 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 93
Query: 386 TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN---- 441
+ LNE ++ + N ++VRLLG + + L+I E + G L +L
Sbjct: 94 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 153
Query: 442 ---LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
+ S +++A + A+ +AYL++ + HRD+ + N ++ +DF K+ DFG++R
Sbjct: 154 LAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR-- 208
Query: 499 KPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ +G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 209 --DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 108/210 (51%), Gaps = 22/210 (10%)
Query: 352 RILGSGGFGEVYKGEL--QDGTV--VAVKSAKVGNI--KSTQQVLNEVGILSQVNHKNLV 405
+ILG G FG V +G L +DGT VAVK+ K+ N + ++ L+E + +H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 406 RLLGCCVEAE-----QPLLIYEYIANGTLHDHLHGKYSSF-----NLTWSTRLRIALQTA 455
RLLG C+E +P++I ++ G LH +L YS ++ T L+ + A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL--LYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPG-LSHVSTCAQGTLG 514
+ YL + + HRD+ + N +L DD VADFGLS+ G A+ +
Sbjct: 158 LGMEYLSNRNFL---HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++ E + T KSDV+++GV + E+ T
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 143
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S A P + C
Sbjct: 144 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRTTLC-- 193
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 26/224 (11%)
Query: 340 ELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKSTQQVLNE 392
E + A + R LG G FG VY KG ++D T VA+K+ + +++ + LNE
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 393 VGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWS 445
++ + N ++VRLLG + + L+I E + G L +L + S
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 446 TRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV 505
+++A + A+ +AYL++ + HRD+ + N ++ +DF K+ DFG++R +
Sbjct: 126 KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 178
Query: 506 STCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 120
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S A P + C
Sbjct: 121 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRTTLC-- 170
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 14/218 (6%)
Query: 351 ERILGSGGFGEVYKGEL----QDGTVVAVKS-AKVGNIKSTQQVLNEVGILSQVNHKNLV 405
+R++G G FG VY GE Q+ A+KS +++ ++ + L E ++ +NH N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 406 RLLGCCVEAEQ-PLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
L+G + E P ++ Y+ +G L + + N T + LQ A + YL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFI--RSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAKPGLS-HVSTCAQGTLGYLDPEYY 521
+ HRD+ + N +LD+ F KVADFGL+R L + S A+ + + E
Sbjct: 144 KFV---HRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 522 RNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
+ Y+ T KSDV+S+GV+L ELLT DP D+
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT 238
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 122
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S + P + C
Sbjct: 123 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC-- 172
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 134
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S A P + C
Sbjct: 135 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRTTLC-- 184
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E Q ++A+K A++ Q+ EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G +A + LI EY GT++ L K S F+ T+ T L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 118
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P + C GTL Y
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDY 172
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 120
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S + P + C
Sbjct: 121 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC-- 170
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY G ++ L K S F+ T+ T L
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-KLSKFDEQRTATYITEL-- 122
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S A P + C
Sbjct: 123 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRTTLC-- 172
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E Q ++A+K A++ Q+ EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G +A + LI EY GT++ L K S F+ T+ T L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 118
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P + C GTL Y
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALC--GTLDY 172
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E Q ++A+K A++ Q+ EV I S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G +A + LI EY GT++ L K S F+ T+ T L A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 117
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P + C GTL Y
Sbjct: 118 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDY 171
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 118
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S A P C
Sbjct: 119 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRTDLC-- 168
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 134/313 (42%), Gaps = 45/313 (14%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 118
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S A S T
Sbjct: 119 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAP---SSRRTTLS 168
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASN 570
GTL YL PE +K D++S GV+ E L + P + N +R S
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV-------GKPPFEANTYQETYKRISR 221
Query: 571 GAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRIIEIVN 630
+E P A +L L+ S+RP + +V L+ N
Sbjct: 222 ---VEFTFPDFVTEGA-----------RDLISRLLKHNPSQRPMLREV---LEHPWITAN 264
Query: 631 QEKVSNDVNVETA 643
K SN N E+A
Sbjct: 265 SSKPSNSQNKESA 277
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 122
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S + P + C
Sbjct: 123 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC-- 172
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E Q ++A+K A++ Q+ EV I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G +A + LI EY GT++ L K S F+ T+ T L A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 121
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P + C GTL Y
Sbjct: 122 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALC--GTLDY 175
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 26/224 (11%)
Query: 340 ELKKATNGFSKERILGSGGFGEVY----KGELQDG--TVVAVKSA-KVGNIKSTQQVLNE 392
E + A + R LG G FG VY KG ++D T VA+K+ + +++ + LNE
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 393 VGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWS 445
++ + N ++VRLLG + + L+I E + G L +L + S
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 446 TRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV 505
+++A + A+ +AYL++ + HRD+ + N + +DF K+ DFG++R +
Sbjct: 126 KMIQMAGEIADGMAYLNANKFV---HRDLAARNCXVAEDFTVKIGDFGMTR----DIYET 178
Query: 506 STCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+G G ++ PE ++ T SDV+S+GVVL E+ T
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 122
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S A P C
Sbjct: 123 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRTDLC-- 172
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 117
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S + P C
Sbjct: 118 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLC-- 167
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E Q ++A+K A++ Q+ EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G +A + LI EY GT++ L K S F+ T+ T L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 118
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P C GTL Y
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELC--GTLDY 172
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 26/230 (11%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD------GTVVAVKSA-KVGNIK 384
P+ +F E + + + R LG G FG VY+G +D T VAVK+ + +++
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN--- 441
+ LNE ++ ++VRLLG + + L++ E +A+G L +L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 442 ----LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL 497
T +++A + A+ +AYL++ + HRD+ + N ++ DF K+ DFG++R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 498 AKPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+ +G G ++ PE ++ T SD++S+GVVL E+
Sbjct: 179 ---DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E Q ++A+K A++ Q+ EV I S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G +A + LI EY GT++ L K S F+ T+ T L A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 122
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P + C GTL Y
Sbjct: 123 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDY 176
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E Q ++A+K A++ Q+ EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G +A + LI EY GT++ L K S F+ T+ T L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 118
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P C GTL Y
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLC--GTLDY 172
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 119
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S A P C
Sbjct: 120 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRXXLC-- 169
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 143
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S A P C
Sbjct: 144 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRDDLC-- 193
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 118
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S A P + C
Sbjct: 119 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRDTLC-- 168
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 120
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S + P C
Sbjct: 121 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLC-- 170
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 13/210 (6%)
Query: 354 LGSGGFGEVYKG--ELQDGTV-VAVKSAKVGNIKS-TQQVLNEVGILSQVNHKNLVRLLG 409
LG G FG V +G ++ + VA+K K G K+ T++++ E I+ Q+++ +VRL+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 410 CCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPI 469
C +AE +L+ E G LH L GK + S + Q + + YL +
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEEKNFV-- 132
Query: 470 YHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT--LGYLDPEYYRNYQLT 527
HRD+ + N+LL + +K++DFGLS+ S+ + + G L + PE + +
Sbjct: 133 -HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 528 DKSDVYSYGVVLLELLT-SQKAIDFSRDPD 556
+SDV+SYGV + E L+ QK + P+
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E Q ++A+K A++ Q+ EV I S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G +A + LI EY GT++ L K S F+ T+ T L A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 115
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P + C GTL Y
Sbjct: 116 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDY 169
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E Q ++A+K A++ Q+ EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G +A + LI EY GT++ L K S F+ T+ T L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 118
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P C GTL Y
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLC--GTLDY 172
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E Q ++A+K A++ Q+ EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G +A + LI EY GT++ L K S F+ T+ T L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 118
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P C GTL Y
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLC--GTLDY 172
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 119
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+A+FG S + P + C
Sbjct: 120 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLC-- 169
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 26/230 (11%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD------GTVVAVKSA-KVGNIK 384
P+ +F E + + + R LG G FG VY+G +D T VAVK+ + +++
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN--- 441
+ LNE ++ ++VRLLG + + L++ E +A+G L +L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 442 ----LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL 497
T +++A + A+ +AYL++ + HRD+ + N ++ DF K+ DFG++R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 498 AKPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+ + +G G ++ PE ++ T SD++S+GVVL E+
Sbjct: 179 ---DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY GT++ L K S F+ T+ T L
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL-- 120
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+A+FG S + P + C
Sbjct: 121 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLC-- 170
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 26/230 (11%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD------GTVVAVKSA-KVGNIK 384
P+ ++ E + + + R LG G FG VY+G +D T VAVK+ + +++
Sbjct: 3 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN--- 441
+ LNE ++ ++VRLLG + + L++ E +A+G L +L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 442 ----LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL 497
T +++A + A+ +AYL++ + HRD+ + N ++ DF K+ DFG++R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 498 AKPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+ +G G ++ PE ++ T SD++S+GVVL E+
Sbjct: 179 ---DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E Q ++A+K A++ Q+ EV I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G +A + LI EY GT++ L K S F+ T+ T L A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 121
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P C GTL Y
Sbjct: 122 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLC--GTLDY 175
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 26/230 (11%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD------GTVVAVKSA-KVGNIK 384
P+ +F E + + + R LG G FG VY+G +D T VAVK+ + +++
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN--- 441
+ LNE ++ ++VRLLG + + L++ E +A+G L +L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 442 ----LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL 497
T +++A + A+ +AYL++ + HRD+ + N ++ DF K+ DFG++R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 498 AKPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+ +G G ++ PE ++ T SD++S+GVVL E+
Sbjct: 179 ---DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 26/210 (12%)
Query: 352 RILGSGGFGEVYKGELQD------GTVVAVKSA-KVGNIKSTQQVLNEVGILSQVNHKNL 404
R LG G FG VY+G +D T VAVK+ + +++ + LNE ++ ++
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEA 457
VRLLG + + L++ E +A+G L +L T +++A + A+
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLG--- 514
+AYL++ + HRD+ + N ++ DF K+ DFG++R + +G G
Sbjct: 140 MAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLP 192
Query: 515 --YLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
++ PE ++ T SD++S+GVVL E+
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 344 ATNGF---SKERILGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV 399
A N F SK ILG G FG+V+K E G +A K K +K ++V NE+ +++Q+
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALA 459
+H NL++L +L+ EY+ G L D + + S+NLT + Q E +
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE--SYNLTELDTILFMKQICEGIR 201
Query: 460 YLHSAAYTPIYHRDVKSTNILL--DDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
++H I H D+K NIL D K+ DFGL+R KP GT +L
Sbjct: 202 HMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP--REKLKVNFGTPEFLA 256
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELLT 544
PE ++ +D++S GV+ LL+
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLS 283
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQVNHKN 403
F R LG G FG VY E Q ++A+K ++ Q+ EV I S + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTAEALA 459
++RL G +A + LI EY GT++ L K S F+ T+ T L A AL+
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSRFDEQRTATYITEL------ANALS 126
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
Y HS + HRD+K N+LL + K+ADFG S + P + C GTL YL PE
Sbjct: 127 YCHSKR---VIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLC--GTLDYLPPE 180
Query: 520 YYRNYQLTDKSDVYSYGVVLLELL 543
+K D++S GV+ E L
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 348 FSKERILGSGGFGEVYKGEL--QDGTVV--AVKSAKVGNIKST--QQVLNEVGILSQVNH 401
F+ R+LG G FG V + +L +DG+ V AVK K I S+ ++ L E + + +H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 402 KNLVRLLGCCVEAEQ------PLLIYEYIANGTLHDHLHGKY---SSFNLTWSTRLRIAL 452
++ +L+G + + P++I ++ +G LH L + FNL T +R +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 453 QTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT 512
A + YL S + HRD+ + N +L +D VADFGLSR G + CA
Sbjct: 145 DIACGMEYLSSRNFI---HRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 513 -LGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ +L E + T SDV+++GV + E++T
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 24/202 (11%)
Query: 354 LGSGGFGEVYKGELQ-DGTVVAVKSAKVG---NIKSTQQVLNEVGILSQVNHKNLVRLLG 409
+G G FGEV+ G L+ D T+VAVKS + ++K+ + L E IL Q +H N+VRL+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA--KFLQEARILKQYSHPNIVRLIG 179
Query: 410 CCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA--LQ----TAEALAYLHS 463
C + +QP+ I + G G + +F T RLR+ LQ A + YL S
Sbjct: 180 VCTQ-KQPIYIVMELVQG-------GDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVS-TCAQGTLGYLDPEYYR 522
HRD+ + N L+ + K++DFG+SR G+ S Q + + PE
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
+ + +SDV+S+G++L E +
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVG 394
K+ + A F R LG G FG VY E Q ++A+K A++ Q+ EV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 395 ILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRI 450
I S + H N++RL G +A + LI EY G ++ L K S F+ T+ T L
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-KLSKFDEQRTATYITEL-- 122
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A AL+Y HS + HRD+K N+LL K+ADFG S A S
Sbjct: 123 ----ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLX 172
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
GTL YL PE +K D++S GV+ E L + +
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 13/210 (6%)
Query: 354 LGSGGFGEVYKG--ELQDGTV-VAVKSAKVGNIKS-TQQVLNEVGILSQVNHKNLVRLLG 409
LG G FG V +G ++ + VA+K K G K+ T++++ E I+ Q+++ +VRL+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 410 CCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPI 469
C +AE +L+ E G LH L GK + S + Q + + YL +
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEEKNFV-- 458
Query: 470 YHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT--LGYLDPEYYRNYQLT 527
HR++ + N+LL + +K++DFGLS+ S+ + + G L + PE + +
Sbjct: 459 -HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 528 DKSDVYSYGVVLLELLT-SQKAIDFSRDPD 556
+SDV+SYGV + E L+ QK + P+
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 132/283 (46%), Gaps = 43/283 (15%)
Query: 354 LGSGGFGEVYKGELQ-DGTVVAVKSAKVG---NIKSTQQVLNEVGILSQVNHKNLVRLLG 409
+G G FGEV+ G L+ D T+VAVKS + ++K+ + L E IL Q +H N+VRL+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA--KFLQEARILKQYSHPNIVRLIG 179
Query: 410 CCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA--LQ----TAEALAYLHS 463
C + +QP+ I + G G + +F T RLR+ LQ A + YL S
Sbjct: 180 VCTQ-KQPIYIVMELVQG-------GDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVS-TCAQGTLGYLDPEYYR 522
HRD+ + N L+ + K++DFG+SR G+ S Q + + PE
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
+ + +SDV+S+G++L E + + S P+ SN E V+ +
Sbjct: 289 YGRYSSESDVWSFGILLWETFS----LGASPYPN-----------LSNQQTREFVE---K 330
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
G L +F L C + +RPS + + ELQ I
Sbjct: 331 GGRLPCPELCPDAVF-RLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQV 399
A F R LG G FG VY E ++A+K A++ Q+ EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTA 455
H N++RL G ++ + LI EY GT++ L K S F+ T+ T L A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL------A 118
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
AL+Y HS + HRD+K N+LL K+ADFG S + P + C GTL Y
Sbjct: 119 NALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALC--GTLDY 172
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L PE +K D++S GV+ E L + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 42/228 (18%)
Query: 348 FSKERILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQ----VLNEVGILSQVNHK 402
F + +LG G FG+V K D A+K I+ T++ +L+EV +L+ +NH+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK-----IRHTEEKLSTILSEVMLLASLNHQ 62
Query: 403 NLVRLLGCCVEAE---QPL----------LIYEYIANGTLHDHLHGKYSSFNLTWSTRLR 449
+VR +E +P+ + EY NGTL+D +H + + N R
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWR 120
Query: 450 IALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK---------- 499
+ Q EAL+Y+HS I HRD+K NI +D+ N K+ DFGL++
Sbjct: 121 LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 500 ---PGLSHVSTCAQGTLGYLDPEYYRNY-QLTDKSDVYSYGVVLLELL 543
PG S T A GT Y+ E +K D+YS G++ E++
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 352 RILGSGGFGEVYKGELQ----DGTVVAVKSAKVG-NIKSTQQVLNEVGILSQVNHKNLVR 406
RILG G FGEVY+G + VAVK+ K + + ++ ++E I+ ++H ++V+
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L+G +E E +I E G L +L +S + T + +LQ +A+AYL S
Sbjct: 74 LIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMAYLESINC 130
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQL 526
HRD+ NIL+ K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 131 V---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 527 TDKSDVYSYGVVLLELLTSQKAIDFSRDPDDV 558
T SDV+ + V + E+L+ K F + DV
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQPFFWLENKDV 219
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 352 RILGSGGFGEVYKGELQ----DGTVVAVKSAKVG-NIKSTQQVLNEVGILSQVNHKNLVR 406
RILG G FGEVY+G + VAVK+ K + + ++ ++E I+ ++H ++V+
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L+G +E E +I E G L +L +S + T + +LQ +A+AYL S
Sbjct: 90 LIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMAYLESINC 146
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQL 526
HRD+ NIL+ K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 147 V---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 203
Query: 527 TDKSDVYSYGVVLLELLTSQKAIDFSRDPDDV 558
T SDV+ + V + E+L+ K F + DV
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQPFFWLENKDV 235
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQVNHKN 403
F R LG G FG VY E Q ++A+K ++ Q+ EV I S + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN----LTWSTRLRIALQTAEALA 459
++RL G +A + LI EY GT++ L K S F+ T+ T L A AL+
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSRFDEQRTATYITEL------ANALS 126
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
Y HS + HRD+K N+LL + K+ADFG S + P + C GTL YL PE
Sbjct: 127 YCHSKR---VIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRDTLC--GTLDYLPPE 180
Query: 520 YYRNYQLTDKSDVYSYGVVLLELLTS 545
+K D++S GV+ E L
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 352 RILGSGGFGEVYKGELQ----DGTVVAVKSAKVG-NIKSTQQVLNEVGILSQVNHKNLVR 406
RILG G FGEVY+G + VAVK+ K + + ++ ++E I+ ++H ++V+
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L+G +E E +I E G L +L +S + T + +LQ +A+AYL S
Sbjct: 78 LIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMAYLESINC 134
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQL 526
HRD+ NIL+ K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 135 V---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 527 TDKSDVYSYGVVLLELLTSQKAIDFSRDPDDV 558
T SDV+ + V + E+L+ K F + DV
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQPFFWLENKDV 223
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 26/241 (10%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVV 373
L E + L S A A++ LKE + + ++LGSG FG VYKG + +G V
Sbjct: 12 LETELVEPLTPSGTAPNQAQLRILKETE-----LKRVKVLGSGAFGTVYKGIWVPEGETV 66
Query: 374 AVKSA-----KVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGT 428
+ A + K+ + ++E I++ ++H +LVRLLG C+ + L+ + + +G
Sbjct: 67 KIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGC 125
Query: 429 L----HDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDD 484
L H+H S L W +Q A+ + YL + HRD+ + N+L+
Sbjct: 126 LLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSP 176
Query: 485 FNSKVADFGLSRLAKPG-LSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
+ K+ DFGL+RL + + + + + ++ E + T +SDV+SYGV + EL+
Sbjct: 177 NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 236
Query: 544 T 544
T
Sbjct: 237 T 237
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 26/210 (12%)
Query: 352 RILGSGGFGEVYKGELQD------GTVVAVKSA-KVGNIKSTQQVLNEVGILSQVNHKNL 404
R LG G FG VY+G +D T VAVK+ + +++ + LNE ++ ++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEA 457
VRLLG + + L++ E +A+G L +L T +++A + A+
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLG--- 514
+AYL++ + HRD+ + N ++ DF K+ DFG++R + +G G
Sbjct: 142 MAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 194
Query: 515 --YLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
++ PE ++ T SD++S+GVVL E+
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 20/232 (8%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI 383
AGK + I LKE+ + + R LG G FGEVY+G++ D + + V + +
Sbjct: 32 FAGKTSSISDLKEVPRKN--ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV 89
Query: 384 KSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY--- 437
S Q L+ E I+S+ NH+N+VR +G +++ ++ E +A G L L
Sbjct: 90 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 149
Query: 438 -SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADFG 493
+L L +A A YL + HRD+ + N LL +K+ DFG
Sbjct: 150 SQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG 206
Query: 494 LSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++R + + G CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 207 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 28/222 (12%)
Query: 334 RIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQ 387
RI ELK+ ++LGSG FG VYKG + +G V + A + K+
Sbjct: 10 RILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 62
Query: 388 QVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL----HDHLHGKYSSFNLT 443
+ ++E I++ ++H +LVRLLG C+ + L+ + + +G L H+H S L
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN 121
Query: 444 WSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPG-L 502
W +Q A+ + YL + HRD+ + N+L+ + K+ DFGL+RL +
Sbjct: 122 W------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ + + + ++ E + T +SDV+SYGV + EL+T
Sbjct: 173 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 20/232 (8%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI 383
AGK + I LKE+ + + R LG G FGEVY+G++ D + + V + +
Sbjct: 55 FAGKTSSISDLKEVPRKN--ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV 112
Query: 384 KSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY--- 437
S Q L+ E I+S+ NH+N+VR +G +++ ++ E +A G L L
Sbjct: 113 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 172
Query: 438 -SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADFG 493
+L L +A A YL + HRD+ + N LL +K+ DFG
Sbjct: 173 SQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG 229
Query: 494 LSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++R + + G CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 135
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 136 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 193 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 249
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 250 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 289
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI--KLLQYTSQICKGMEYLGTKRY 138
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 139 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 196 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 252
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 253 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 139
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 140 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 197 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 253
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 254 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 293
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 134
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 135 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 192 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 248
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 249 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 288
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 135
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 136 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 193 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 249
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 250 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 289
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 26/230 (11%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD------GTVVAVKSA-KVGNIK 384
P+ ++ E + + + R LG G FG VY+G +D T VAVK+ + +++
Sbjct: 3 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN--- 441
+ LNE ++ ++VRLLG + + L++ E +A+G L +L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 442 ----LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL 497
T +++A + A+ +AYL++ + HR++ + N ++ DF K+ DFG++R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 498 AKPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+ +G G ++ PE ++ T SD++S+GVVL E+
Sbjct: 179 ---DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 133
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 134 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 191 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 247
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 248 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 287
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 166
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 167 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 224 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 280
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 281 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 320
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 135
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 136 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 193 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 249
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 250 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 153
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 154 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 211 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 267
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 268 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 26/230 (11%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD------GTVVAVKSA-KVGNIK 384
P+ ++ E + + + R LG G FG VY+G +D T VAVK+ + +++
Sbjct: 4 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 63
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN--- 441
+ LNE ++ ++VRLLG + + L++ E +A+G L +L
Sbjct: 64 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 123
Query: 442 ----LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL 497
T +++A + A+ +AYL++ + HR++ + N ++ DF K+ DFG++R
Sbjct: 124 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTR- 179
Query: 498 AKPGLSHVSTCAQGTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+ +G G ++ PE ++ T SD++S+GVVL E+
Sbjct: 180 ---DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 138
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 139 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 196 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 252
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 253 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 292
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 141
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 142 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 199 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 255
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 256 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 295
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 153
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 154 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 211 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 267
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 268 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 307
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 140
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 141 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 198 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 254
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 255 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 294
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 142
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 143 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 200 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 256
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 257 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 296
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 113/223 (50%), Gaps = 30/223 (13%)
Query: 334 RIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-KV----GNIKSTQ 387
RI EL+K ++LGSG FG VYKG + DG V + A KV + K+ +
Sbjct: 12 RILKETELRKV-------KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK 64
Query: 388 QVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLH---GKYSSFNLTW 444
++L+E +++ V + RLLG C+ + L + + + G L DH+ G+ S +L
Sbjct: 65 EILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDL-- 121
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH 504
L +Q A+ ++YL + HRD+ + N+L+ + K+ DFGL+RL +
Sbjct: 122 ---LNWCMQIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLD--IDE 173
Query: 505 VSTCAQG---TLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
A G + ++ E + T +SDV+SYGV + EL+T
Sbjct: 174 TEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 327 NIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGN 382
+ AGK + I LKE+ + + R LG G FGEVY+G++ D + + V +
Sbjct: 14 SFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 71
Query: 383 IKSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY-- 437
+ S Q L+ E I+S++NH+N+VR +G +++ ++ E +A G L L
Sbjct: 72 VCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 438 --SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADF 492
+L L +A A YL + HRD+ + N LL +K+ DF
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 493 GLSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G++R + + CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 189 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI 383
AGK + I LKE+ + + R LG G FGEVY+G++ D + + V + +
Sbjct: 14 FAGKTSSISDLKEVPRKN--ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV 71
Query: 384 KSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY--- 437
S Q L+ E I+S+ NH+N+VR +G +++ ++ E +A G L L
Sbjct: 72 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP 131
Query: 438 -SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADFG 493
+L L +A A YL + HRD+ + N LL +K+ DFG
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 494 LSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++R + + CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 42/233 (18%)
Query: 343 KATNGFSKERILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQ----VLNEVGILS 397
+ + F + +LG G FG+V K D A+K I+ T++ +L+EV +L+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKK-----IRHTEEKLSTILSEVMLLA 57
Query: 398 QVNHKNLVRLLGCCVEAE---QPL----------LIYEYIANGTLHDHLHGKYSSFNLTW 444
+NH+ +VR +E +P+ + EY N TL+D +H + + N
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE--NLNQQR 115
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK----- 499
R+ Q EAL+Y+HS I HRD+K NI +D+ N K+ DFGL++
Sbjct: 116 DEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 500 --------PGLSHVSTCAQGTLGYLDPEYYRNY-QLTDKSDVYSYGVVLLELL 543
PG S T A GT Y+ E +K D+YS G++ E++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 36/230 (15%)
Query: 346 NGFSKERILGSGGFGEVYKGE------LQDGTVVAVKSAKVGNIKSTQQVLN-EVGILSQ 398
N R +G G FG V++ + T+VAVK K Q E ++++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHL-----HGKYSSFNLTWSTRLR---- 449
++ N+V+LLG C + L++EY+A G L++ L H S + STR R
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 450 ------------IALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR- 496
IA Q A +AYL + HRD+ + N L+ ++ K+ADFGLSR
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFV---HRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 497 LAKPGLSHVSTCAQGTLGYLDPE--YYRNYQLTDKSDVYSYGVVLLELLT 544
+ + ++ PE +Y Y T +SDV++YGVVL E+ +
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRY--TTESDVWAYGVVLWEIFS 271
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI 383
AGK + I LKE+ + + R LG G FGEVY+G++ D + + V + +
Sbjct: 14 FAGKTSSISDLKEVPRKN--ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV 71
Query: 384 KSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY--- 437
S Q L+ E I+S+ NH+N+VR +G +++ ++ E +A G L L
Sbjct: 72 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 131
Query: 438 -SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADFG 493
+L L +A A YL + HRD+ + N LL +K+ DFG
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 494 LSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++R + + CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 20/232 (8%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI 383
AGK + I LKE+ + + R LG G FGEVY+G++ D + + V + +
Sbjct: 29 FAGKTSSISDLKEVPRKN--ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV 86
Query: 384 KSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY--- 437
S Q L+ E I+S++NH+N+VR +G +++ ++ E +A G L L
Sbjct: 87 CSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 146
Query: 438 -SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADFG 493
+L L +A A YL + HRD+ + N LL +K+ DFG
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 494 LSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++R + + CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 20/233 (8%)
Query: 327 NIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGN 382
+ AGK + I LKE+ + + R LG G FGEVY+G++ D + + V +
Sbjct: 14 SFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 71
Query: 383 IKSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY-- 437
+ S Q L+ E I+S+ NH+N+VR +G +++ ++ E +A G L L
Sbjct: 72 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 438 --SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADF 492
+L L +A A YL + HRD+ + N LL +K+ DF
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 493 GLSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G++R + + CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 189 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI 383
AGK + I LKE+ + + R LG G FGEVY+G++ D + + V + +
Sbjct: 6 FAGKTSSISDLKEVPRKN--ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV 63
Query: 384 KSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY--- 437
S Q L+ E I+S+ NH+N+VR +G +++ ++ E +A G L L
Sbjct: 64 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 123
Query: 438 -SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADFG 493
+L L +A A YL + HRD+ + N LL +K+ DFG
Sbjct: 124 SQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG 180
Query: 494 LSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++R + + CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 181 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 352 RILGSGGFGEVYKGELQD----GTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVR 406
R +G G FG+V++G VA+K+ K S ++ L E + Q +H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+G V E P+ +I E G L L + F+L ++ + A Q + ALAYL S
Sbjct: 76 LIG--VITENPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR 131
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+ + N+L+ + K+ DFGLSR + ++ + + ++ PE +
Sbjct: 132 FV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRR 188
Query: 526 LTDKSDVYSYGVVLLELL 543
T SDV+ +GV + E+L
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 25/251 (9%)
Query: 314 KLAKEREDMLKSS-----NIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL- 367
KL+K R + + + AGK + I LKE+ + + R LG G FGEVY+G++
Sbjct: 2 KLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVS 59
Query: 368 ---QDGTVVAVKSAKVGNIKSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIY 421
D + + V + + S Q L+ E I+S+ NH+N+VR +G +++ ++
Sbjct: 60 GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL 119
Query: 422 EYIANGTLHDHLHGKY----SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKST 477
E +A G L L +L L +A A YL + HRD+ +
Sbjct: 120 ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAAR 176
Query: 478 NILL---DDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVY 533
N LL +K+ DFG++R + + CA + ++ PE + T K+D +
Sbjct: 177 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 236
Query: 534 SYGVVLLELLT 544
S+GV+L E+ +
Sbjct: 237 SFGVLLWEIFS 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI 383
AGK + I LKE+ + + R LG G FGEVY+G++ D + + V + +
Sbjct: 31 FAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV 88
Query: 384 KSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY--- 437
S Q L+ E I+S+ NH+N+VR +G +++ ++ E +A G L L
Sbjct: 89 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 148
Query: 438 -SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADFG 493
+L L +A A YL + HRD+ + N LL +K+ DFG
Sbjct: 149 SQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG 205
Query: 494 LSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++R + + CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 206 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 34/289 (11%)
Query: 354 LGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 409 GCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G C A + LI EY+ G+L D+L + L+ Q + + YL + Y
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 136
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--VSTCAQGTLGYLDPEYYRNY 524
HR++ + NIL++++ K+ DFGL+++ + V + + + PE
Sbjct: 137 I---HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 525 QLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD------ 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 194 KFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 250
Query: 579 --PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 251 RLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 290
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 26/244 (10%)
Query: 353 ILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL---- 408
I G FG V+K +L + VAVK + + K + Q E+ + H+NL++ +
Sbjct: 22 IKARGRFGCVWKAQLMN-DFVAVKIFPLQD-KQSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 409 -GCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH----- 462
G +E E LI + G+L D+L G +TW+ +A + L+YLH
Sbjct: 80 RGSNLEVEL-WLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 463 --SAAYTP-IYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ-GTLGYLDP 518
+ P I HRD KS N+LL D + +ADFGL+ +PG T Q GT Y+ P
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 519 EYYR---NYQLTD--KSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAI 573
E N+Q + D+Y+ G+VL EL++ KA D D + + Q S +
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEEL 254
Query: 574 MEVV 577
EVV
Sbjct: 255 QEVV 258
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 25/255 (9%)
Query: 310 AKQAKLAKEREDMLKSS-----NIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYK 364
+ + KL+K R + + + AGK + I LKE+ + + R LG G FGEVY+
Sbjct: 18 SPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYE 75
Query: 365 GEL----QDGTVVAVKSAKVGNIKSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQP 417
G++ D + + V + + S Q L+ E I+S+ NH+N+VR +G +++
Sbjct: 76 GQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 135
Query: 418 LLIYEYIANGTLHDHLHGKY----SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRD 473
++ E +A G L L +L L +A A YL + HRD
Sbjct: 136 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRD 192
Query: 474 VKSTNILL---DDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK 529
+ + N LL +K+ DFG++R + + CA + ++ PE + T K
Sbjct: 193 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 252
Query: 530 SDVYSYGVVLLELLT 544
+D +S+GV+L E+ +
Sbjct: 253 TDTWSFGVLLWEIFS 267
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 124/246 (50%), Gaps = 32/246 (13%)
Query: 314 KLAKERE--DMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDG 370
+L +ERE + L S A A + LKE + F K ++LGSG FG VYKG + +G
Sbjct: 20 RLLQERELVEPLTPSGEAPNQALLRILKETE-----FKKIKVLGSGAFGTVYKGLWIPEG 74
Query: 371 TVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIA 425
V + A + + K+ +++L+E +++ V++ ++ RLLG C+ + LI + +
Sbjct: 75 EKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMP 133
Query: 426 NGTLHD----HLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL 481
G L D H S + L W +Q A+ + YL + HRD+ + N+L+
Sbjct: 134 FGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLV 184
Query: 482 DDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDPEYYRNYQLTDKSDVYSYGVV 538
+ K+ DFGL++L G A+G + ++ E + T +SDV+SYGV
Sbjct: 185 KTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVT 242
Query: 539 LLELLT 544
+ EL+T
Sbjct: 243 VWELMT 248
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI 383
AGK + I LKE+ + + R LG G FGEVY+G++ D + + V + +
Sbjct: 29 FAGKTSSISDLKEVPRKN--ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV 86
Query: 384 KSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY--- 437
S Q L+ E I+S+ NH+N+VR +G +++ ++ E +A G L L
Sbjct: 87 YSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 146
Query: 438 -SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADFG 493
+L L +A A YL + HRD+ + N LL +K+ DFG
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 494 LSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++R + + CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGNI 383
AGK + I LKE+ + + R LG G FGEVY+G++ D + + V + +
Sbjct: 29 FAGKTSSISDLKEVPRKN--ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV 86
Query: 384 KSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY--- 437
S Q L+ E I+S+ NH+N+VR +G +++ ++ E +A G L L
Sbjct: 87 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP 146
Query: 438 -SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADFG 493
+L L +A A YL + HRD+ + N LL +K+ DFG
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 494 LSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++R + + CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 352 RILGSGGFGEVYK---GELQD--GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
R LG G FG V LQD G VVAVK + + + E+ IL + H N+V+
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 407 LLGCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
G C A + LI E++ G+L ++L + L+ Q + + YL +
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI--KLLQYTSQICKGMEYLGTK 136
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYR 522
Y HRD+ + NIL++++ K+ DFGL+++ V + + + PE
Sbjct: 137 RYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVD---- 578
+ + SDV+S+GVVL EL T I+ S+ P + + + + + +++
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 250
Query: 579 ----PRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
PR G + ++M+ C ++RPS D+ + +I
Sbjct: 251 NGRLPRPDGCPDEIYMIMT---------ECWNNNVNQRPSFRDLALRVDQI 292
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 352 RILGSGGFGEVYKGELQD----GTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVR 406
R +G G FG+V++G VA+K+ K S ++ L E + Q +H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+G V E P+ +I E G L L + S +L ++ + A Q + ALAYL S
Sbjct: 76 LIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESKR 131
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+ + N+L+ + K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 132 FV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 526 LTDKSDVYSYGVVLLELL 543
T SDV+ +GV + E+L
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 23/233 (9%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKST---- 386
P ++ + ++ + N + LG+G FG+V + G AV V +KST
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 387 --QQVLNEVGILSQV-NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------- 436
+ +++E+ I+S + H+N+V LLG C L+I EY G L + L K
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 437 --YSSFNLTWSTR--LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADF 492
++ N T STR L + Q A+ +A+L S HRDV + N+LL + +K+ DF
Sbjct: 152 PAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDF 208
Query: 493 GLSRLAKPGLSH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
GL+R ++ V A+ + ++ PE + T +SDV+SYG++L E+ +
Sbjct: 209 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 23/233 (9%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKST---- 386
P ++ + ++ + N + LG+G FG+V + G AV V +KST
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 387 --QQVLNEVGILSQV-NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------- 436
+ +++E+ I+S + H+N+V LLG C L+I EY G L + L K
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 437 --YSSFNLTWSTR--LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADF 492
++ N T STR L + Q A+ +A+L S HRDV + N+LL + +K+ DF
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDF 208
Query: 493 GLSRLAKPGLSH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
GL+R ++ V A+ + ++ PE + T +SDV+SYG++L E+ +
Sbjct: 209 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 352 RILGSGGFGEVYKGELQD----GTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVR 406
R +G G FG+V++G VA+K+ K S ++ L E + Q +H ++V+
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+G V E P+ +I E G L L + S +L ++ + A Q + ALAYL S
Sbjct: 73 LIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESKR 128
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+ + N+L+ + K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 129 FV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 526 LTDKSDVYSYGVVLLELL 543
T SDV+ +GV + E+L
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 49/305 (16%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVYKG-------ELQDGTVVAVKSAKVGNIKS 385
ARIF EL+K ++LGSG FG V+KG ++ + V K G +S
Sbjct: 25 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR-QS 76
Query: 386 TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN---- 441
Q V + + + ++H ++VRLLG C L+ +Y+ G+L DH+ +
Sbjct: 77 FQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL 135
Query: 442 LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPG 501
L W +Q A+ + YL + HR++ + N+LL +VADFG++ L P
Sbjct: 136 LNW------GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 186
Query: 502 LSH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNL 560
+ + A+ + ++ E + T +SDV+SYGV + EL+T F +P
Sbjct: 187 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT------FGAEP----- 235
Query: 561 AIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVH 620
Y R + EV D +G + + ++ ++ + V C ++ RP+ ++ +
Sbjct: 236 --YAGLR-----LAEVPDLLEKGERLAQPQICTIDVYM-VMVKCWMIDENIRPTFKELAN 287
Query: 621 ELQRI 625
E R+
Sbjct: 288 EFTRM 292
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 354 LGSGGFGEVY--------KGELQDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V K + T VAVK K K +++E+ ++ + HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYS-----SFN--------LTWSTRLRI 450
++ LLG C + +I EY + G L ++L + SFN L+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A Q A + YL S HRD+ + N+L+ +D K+ADFGL+R + H+ +
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXKK 208
Query: 511 GTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
T G ++ PE + T +SDV+S+GV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 352 RILGSGGFGEVYKGELQD----GTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVR 406
R +G G FG+V++G VA+K+ K S ++ L E + Q +H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+G V E P+ +I E G L L + S +L ++ + A Q + ALAYL S
Sbjct: 76 LIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESKR 131
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+ + N+L+ + K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 132 FV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 526 LTDKSDVYSYGVVLLELL 543
T SDV+ +GV + E+L
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 352 RILGSGGFGEVYKGELQD----GTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVR 406
R +G G FG+V++G VA+K+ K S ++ L E + Q +H ++V+
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+G V E P+ +I E G L L + S +L ++ + A Q + ALAYL S
Sbjct: 81 LIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESKR 136
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+ + N+L+ + K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 137 FV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 526 LTDKSDVYSYGVVLLELL 543
T SDV+ +GV + E+L
Sbjct: 194 FTSASDVWMFGVCMWEIL 211
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 352 RILGSGGFGEVYKGELQD----GTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVR 406
R +G G FG+V++G VA+K+ K S ++ L E + Q +H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+G V E P+ +I E G L L + F+L ++ + A Q + ALAYL S
Sbjct: 76 LIG--VITENPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR 131
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+ + N+L+ K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 132 FV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 526 LTDKSDVYSYGVVLLELL 543
T SDV+ +GV + E+L
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 352 RILGSGGFGEVYKGELQD----GTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVR 406
R +G G FG+V++G VA+K+ K S ++ L E + Q +H ++V+
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+G V E P+ +I E G L L + S +L ++ + A Q + ALAYL S
Sbjct: 78 LIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESKR 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+ + N+L+ + K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 134 FV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 526 LTDKSDVYSYGVVLLELL 543
T SDV+ +GV + E+L
Sbjct: 191 FTSASDVWMFGVCMWEIL 208
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 49/305 (16%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVYKG-------ELQDGTVVAVKSAKVGNIKS 385
ARIF EL+K ++LGSG FG V+KG ++ + V K G +S
Sbjct: 7 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR-QS 58
Query: 386 TQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN---- 441
Q V + + + ++H ++VRLLG C L+ +Y+ G+L DH+ +
Sbjct: 59 FQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL 117
Query: 442 LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPG 501
L W +Q A+ + YL + HR++ + N+LL +VADFG++ L P
Sbjct: 118 LNW------GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168
Query: 502 LSH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNL 560
+ + A+ + ++ E + T +SDV+SYGV + EL+T F +P
Sbjct: 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT------FGAEP----- 217
Query: 561 AIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVH 620
Y R + EV D +G + + ++ ++ + V C ++ RP+ ++ +
Sbjct: 218 --YAGLR-----LAEVPDLLEKGERLAQPQICTIDVYM-VMVKCWMIDENIRPTFKELAN 269
Query: 621 ELQRI 625
E R+
Sbjct: 270 EFTRM 274
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q AE + YL
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAEGMNYL 130
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 131 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 185
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 186 ESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 352 RILGSGGFGEVYKGELQD----GTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVR 406
R +G G FG+V++G VA+K+ K S ++ L E + Q +H ++V+
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+G V E P+ +I E G L L + S +L ++ + A Q + ALAYL S
Sbjct: 79 LIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESKR 134
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+ + N+L+ + K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 135 FV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 526 LTDKSDVYSYGVVLLELL 543
T SDV+ +GV + E+L
Sbjct: 192 FTSASDVWMFGVCMWEIL 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 352 RILGSGGFGEVYKGELQD----GTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVR 406
R +G G FG+V++G VA+K+ K S ++ L E + Q +H ++V+
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+G V E P+ +I E G L L + S +L ++ + A Q + ALAYL S
Sbjct: 104 LIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESKR 159
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+ + N+L+ + K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 160 FV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 216
Query: 526 LTDKSDVYSYGVVLLELL 543
T SDV+ +GV + E+L
Sbjct: 217 FTSASDVWMFGVCMWEIL 234
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 352 RILGSGGFGEVYKGELQD----GTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVR 406
R +G G FG+V++G VA+K+ K S ++ L E + Q +H ++V+
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+G V E P+ +I E G L L + F+L ++ + A Q + ALAYL S
Sbjct: 456 LIG--VITENPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR 511
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+ + N+L+ + K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 512 FV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 526 LTDKSDVYSYGVVLLELL 543
T SDV+ +GV + E+L
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 135 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 189
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 20/230 (8%)
Query: 325 SSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKV 380
++ +A P R F + F R LG G FG VY E Q+ ++A+K +++
Sbjct: 1 NTALAEMPKRKF-------TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL 53
Query: 381 GNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSF 440
Q+ E+ I S + H N++R+ + ++ L+ E+ G L+ L K+ F
Sbjct: 54 EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRF 112
Query: 441 NLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKP 500
+ S L A+AL Y H + HRD+K N+L+ K+ADFG S + P
Sbjct: 113 DEQRSATFMEEL--ADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-VHAP 166
Query: 501 GLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L C GTL YL PE +K D++ GV+ E L D
Sbjct: 167 SLRRRXMC--GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 20/229 (8%)
Query: 326 SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVG 381
+ +A P R F + F R LG G FG VY E Q+ ++A+K +++
Sbjct: 1 TALAEMPKRKF-------TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE 53
Query: 382 NIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN 441
Q+ E+ I S + H N++R+ + ++ L+ E+ G L+ L K+ F+
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFD 112
Query: 442 LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPG 501
S L A+AL Y H + HRD+K N+L+ K+ADFG S + P
Sbjct: 113 EQRSATFMEEL--ADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-VHAPS 166
Query: 502 LSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L C GTL YL PE +K D++ GV+ E L D
Sbjct: 167 LRRRXMC--GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 20/233 (8%)
Query: 327 NIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGEL----QDGTVVAVKSAKVGN 382
+ AGK + I LKE+ + + R LG G FGEVY+G++ D + + V +
Sbjct: 14 SFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 71
Query: 383 IKSTQQVLN---EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY-- 437
+ S Q L+ E I+S+ NH+N+VR +G +++ ++ E +A G L L
Sbjct: 72 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 438 --SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFNSKVADF 492
+L L +A A YL + HRD+ + N LL +K+ DF
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 493 GLSR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G+++ + + CA + ++ PE + T K+D +S+GV+L E+ +
Sbjct: 189 GMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 188
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 135 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 189
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 138 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 192
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 324 KSSNIAGKPARIFHLKELKKATNG------FSKERILGSGGFGEVYKGE-LQDGTVVAVK 376
+S + G P F ++ + G F E+ +G G F EVY+ L DG VA+K
Sbjct: 4 QSQGMQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALK 63
Query: 377 SAKVGNI---KSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHL 433
++ ++ K+ + E+ +L Q+NH N+++ +E + ++ E G L +
Sbjct: 64 KVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMI 123
Query: 434 -HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADF 492
H K + T + +Q AL ++HS + HRD+K N+ + K+ D
Sbjct: 124 KHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDL 180
Query: 493 GLSRLAKPGLSHVSTCAQGTLG---YLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
GL R S +T A +G Y+ PE KSD++S G +L E+ Q
Sbjct: 181 GLGRF----FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 233
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 137 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 191
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 136 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 190
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 20/229 (8%)
Query: 326 SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVG 381
+ +A P R F + F R LG G FG VY E Q+ ++A+K +++
Sbjct: 1 TALAEMPKRKF-------TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE 53
Query: 382 NIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN 441
Q+ E+ I S + H N++R+ + ++ L+ E+ G L+ L K+ F+
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFD 112
Query: 442 LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPG 501
S L A+AL Y H + HRD+K N+L+ K+ADFG S + P
Sbjct: 113 EQRSATFMEEL--ADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-VHAPS 166
Query: 502 LSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
L C GTL YL PE +K D++ GV+ E L D
Sbjct: 167 LRRRXMC--GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 188
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 143
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 144 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 198
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 199 ESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 127
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 128 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 182
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 348 FSKERILGSGGFGEVYKGE-LQDGTVVAVKSA------KVGNIKSTQQVLNEVGILSQVN 400
F +LG G F VY+ E + G VA+K K G + Q+V NEV I Q+
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMV---QRVQNEVKIHCQLK 69
Query: 401 HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
H +++ L ++ L+ E NG ++ +L + F+ + Q + Y
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF--MHQIITGMLY 127
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPE 519
LHS I HRD+ +N+LL + N K+ADFGL ++L P H + C GT Y+ PE
Sbjct: 128 LHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPNYISPE 182
Query: 520 YYRNYQLTDKSDVYSYGVVLLELLTSQKAID 550
+SDV+S G + LL + D
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 139
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 140 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 194
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 195 ESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 137 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 191
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 141 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 195
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 188
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 188
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 137 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 191
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 137 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 191
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 136 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 190
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 120/249 (48%), Gaps = 27/249 (10%)
Query: 320 EDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKG------ELQDGTVV 373
E++ ++ + P ++ + + + N S + LG+G FG+V + + V
Sbjct: 13 EEINGNNXVXIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTV 72
Query: 374 AVKSAK-VGNIKSTQQVLNEVGILSQV-NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHD 431
AVK K ++ + +++E+ +LS + NH N+V LLG C L+I EY G L +
Sbjct: 73 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 132
Query: 432 HLHGKYSSFNLTWST---------------RLRIALQTAEALAYLHSAAYTPIYHRDVKS 476
L K SF + ++ L + Q A+ +A+L S HRD+ +
Sbjct: 133 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAA 189
Query: 477 TNILLDDDFNSKVADFGLSRLAKPGLSH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSY 535
NILL +K+ DFGL+R K ++ V A+ + ++ PE N T +SDV+SY
Sbjct: 190 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 249
Query: 536 GVVLLELLT 544
G+ L EL +
Sbjct: 250 GIFLWELFS 258
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGNIK-STQQVLNEVGILSQVNHKNLV 405
F + LG GGFG V++ + + D A+K ++ N + + ++V+ EV L+++ H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 406 RLLGCCVEAE-----QPL--LIYEYIA-----NGTLHDHLHGKYSSFNLTWSTRLRIALQ 453
R +E QP +Y YI L D ++G+ + S L I LQ
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 454 TAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL----------SRLAKPGLS 503
AEA+ +LHS + HRD+K +NI D KV DFGL + P +
Sbjct: 127 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 504 HVSTCAQ-GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
+ Q GT Y+ PE + K D++S G++L ELL
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 352 RILGSGGFGEVYKGELQD----GTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVR 406
R +G G FG+V++G VA+K+ K S ++ L E + Q +H ++V+
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+G V E P+ +I E G L L + F+L ++ + A Q + ALAYL S
Sbjct: 456 LIG--VITENPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR 511
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+ + N+L+ K+ DFGLSR + + ++ + + ++ PE +
Sbjct: 512 FV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 526 LTDKSDVYSYGVVLLELL 543
T SDV+ +GV + E+L
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 158
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 159 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 213
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 214 ESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 346 NGFSKERILGSGGFGEVYKG------ELQDGTVVAVKSAK-VGNIKSTQQVLNEVGILSQ 398
N S + LG+G FG+V + + VAVK K ++ + +++E+ +LS
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 399 V-NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST----------- 446
+ NH N+V LLG C L+I EY G L + L K SF + ++
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 447 ----RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL 502
L + Q A+ +A+L S HRD+ + NILL +K+ DFGL+R K
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 503 SH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++ V A+ + ++ PE N T +SDV+SYG+ L EL +
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 346 NGFSKERILGSGGFGEVYKG------ELQDGTVVAVKSAK-VGNIKSTQQVLNEVGILSQ 398
N S + LG+G FG+V + + VAVK K ++ + +++E+ +LS
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 399 V-NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST----------- 446
+ NH N+V LLG C L+I EY G L + L K SF + ++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 447 ----RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL 502
L + Q A+ +A+L S HRD+ + NILL +K+ DFGL+R K
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 503 SH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++ V A+ + ++ PE N T +SDV+SYG+ L EL +
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 337 HLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN---E 392
H+ ++ + ILG GG EV+ +L+D VAVK + + L E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 393 VGILSQVNHKNLVRLLGCCVEAEQP-----LLIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
+ +NH +V + EAE P ++ EY+ TL D +H + +T
Sbjct: 63 AQNAAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRA 118
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVS 506
+ + +AL + H I HRDVK NIL+ KV DFG++R +A G S
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 507 TCAQ-GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
T A GT YL PE R + +SDVYS G VL E+LT +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 352 RILGSGGFGEV----YKGELQD-GTVVAVKSAKV---GNIKSTQQVLNEVGILSQVNHKN 403
R LG G FG+V Y E + G VAVKS K GN + E+ IL + H+N
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN--HIADLKKEIEILRNLYHEN 84
Query: 404 LVRLLGCCVE--AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
+V+ G C E LI E++ +G+L ++L + NL +L+ A+Q + + YL
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYL 142
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--VSTCAQGTLGYLDPE 519
S Y HRD+ + N+L++ + K+ DFGL++ + V + + PE
Sbjct: 143 GSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 199
Query: 520 YYRNYQLTDKSDVYSYGVVLLELLT 544
+ SDV+S+GV L ELLT
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 346 NGFSKERILGSGGFGEVYKG------ELQDGTVVAVKSAK-VGNIKSTQQVLNEVGILSQ 398
N S + LG+G FG+V + + VAVK K ++ + +++E+ +LS
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 399 V-NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST----------- 446
+ NH N+V LLG C L+I EY G L + L K SF + ++
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 447 ----RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL 502
L + Q A+ +A+L S HRD+ + NILL +K+ DFGL+R K
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 503 SH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++ V A+ + ++ PE N T +SDV+SYG+ L EL +
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 352 RILGSGGFGEV----YKGELQD-GTVVAVKSAKV---GNIKSTQQVLNEVGILSQVNHKN 403
R LG G FG+V Y E + G VAVKS K GN + E+ IL + H+N
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN--HIADLKKEIEILRNLYHEN 72
Query: 404 LVRLLGCCVE--AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
+V+ G C E LI E++ +G+L ++L + NL +L+ A+Q + + YL
Sbjct: 73 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYL 130
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--VSTCAQGTLGYLDPE 519
S Y HRD+ + N+L++ + K+ DFGL++ + V + + PE
Sbjct: 131 GSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 187
Query: 520 YYRNYQLTDKSDVYSYGVVLLELLT 544
+ SDV+S+GV L ELLT
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 108/234 (46%), Gaps = 21/234 (8%)
Query: 337 HLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN---E 392
H+ ++ + ILG GG EV+ +L+D VAVK + + L E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 393 VGILSQVNHKNLVRLLGCCVEAEQPL-----LIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
+ +NH +V + EAE P ++ EY+ TL D +H + +T
Sbjct: 63 AQNAAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRA 118
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVS 506
+ + +AL + H I HRDVK NI++ KV DFG++R +A G S
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 507 TCAQ-GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRD-PDDV 558
T A GT YL PE R + +SDVYS G VL E+LT + F+ D PD V
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPDSV 227
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 351 ERILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRL 407
++ +G G F +V + G VAVK + T Q++ EV I+ +NH N+V+L
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 408 LGCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
+E E+ L L+ EY + G + D+L HG+ R Q A+ Y H
Sbjct: 80 FEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQK 133
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNY 524
I HRD+K+ N+LLD D N K+ADFG S G + C G+ Y PE ++
Sbjct: 134 Y---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC--GSPPYAAPELFQGK 188
Query: 525 QLTD-KSDVYSYGVVLLELLTSQKAID 550
+ + DV+S GV+L L++ D
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 352 RILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLL 408
+ +G G F +V + G VAVK + S+ Q++ EV I+ +NH N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 409 GCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E E+ L L+ EY + G + D+L HG+ R Q A+ Y H
Sbjct: 80 EV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K+ N+LLD D N K+ADFG S G + C G+ Y PE ++ +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKK 188
Query: 526 LTD-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L L++ D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 354 LGSGGFGEVY--------KGELQDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V K + T VAVK K K +++E+ ++ + HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYS-----SFN--------LTWSTRLRI 450
++ LLG C + +I EY + G L ++L + S+N L+ +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A Q A + YL S HRD+ + N+L+ +D K+ADFGL+R + H+ +
Sbjct: 149 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 201
Query: 511 GTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
T G ++ PE + T +SDV+S+GV+L E+ T
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 354 LGSGGFGEVY--------KGELQDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V K + T VAVK K K +++E+ ++ + HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYS-----SFN--------LTWSTRLRI 450
++ LLG C + +I EY + G L ++L + S+N L+ +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A Q A + YL S HRD+ + N+L+ +D K+ADFGL+R + H+ +
Sbjct: 145 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 197
Query: 511 GTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
T G ++ PE + T +SDV+S+GV+L E+ T
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 354 LGSGGFGEVY--------KGELQDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V K + T VAVK K K +++E+ ++ + HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYS-----SFN--------LTWSTRLRI 450
++ LLG C + +I EY + G L ++L + S+N L+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A Q A + YL S HRD+ + N+L+ +D K+ADFGL+R + H+ +
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 511 GTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
T G ++ PE + T +SDV+S+GV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 346 NGFSKERILGSGGFGEVYKG------ELQDGTVVAVKSAK-VGNIKSTQQVLNEVGILSQ 398
N S + LG+G FG+V + + VAVK K ++ + +++E+ +LS
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 399 V-NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST----------- 446
+ NH N+V LLG C L+I EY G L + L K SF + ++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 447 ----RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL 502
L + Q A+ +A+L S HRD+ + NILL +K+ DFGL+R K
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 503 SH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++ V A+ + ++ PE N T +SDV+SYG+ L EL +
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 352 RILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLL 408
+ +G G F +V + G VA+K + T Q++ EV I+ +NH N+V+L
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 409 GCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E E+ L LI EY + G + D+L HG+ R Q A+ Y H
Sbjct: 81 EV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQYCHQKR 134
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K+ N+LLD D N K+ADFG S G + C G Y PE ++ +
Sbjct: 135 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC--GAPPYAAPELFQGKK 189
Query: 526 LTD-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L L++ D
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 352 RILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLL 408
+ +G G F +V + G VA+K + T Q++ EV I+ +NH N+V+L
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 409 GCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E E+ L LI EY + G + D+L HG+ R Q A+ Y H
Sbjct: 78 EV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQYCHQKR 131
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K+ N+LLD D N K+ADFG S G + C G+ Y PE ++ +
Sbjct: 132 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC--GSPPYAAPELFQGKK 186
Query: 526 LTD-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L L++ D
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 352 RILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLL 408
+ +G G F +V + G VAVK + S+ Q++ EV I+ +NH N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 409 GCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E E+ L L+ EY + G + D+L HG+ R Q A+ Y H
Sbjct: 80 EV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K+ N+LLD D N K+ADFG S G + C G+ Y PE ++ +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKK 188
Query: 526 LTD-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L L++ D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 354 LGSGGFGEVY--------KGELQDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V K + T VAVK K K +++E+ ++ + HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLH-----GKYSSFN--------LTWSTRLRI 450
++ LLG C + +I EY + G L ++L G S+N L+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A Q A + YL S HRD+ + N+L+ +D K+ADFGL+R + H+ +
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 511 GTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
T G ++ PE + T +SDV+S+GV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 354 LGSGGFGEVY--------KGELQDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V K + T VAVK K K +++E+ ++ + HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYS-----SFN--------LTWSTRLRI 450
++ LLG C + +I EY + G L ++L + S+N L+ +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A Q A + YL S HRD+ + N+L+ +D K+ADFGL+R + H+ +
Sbjct: 148 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 200
Query: 511 GTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
T G ++ PE + T +SDV+S+GV+L E+ T
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 337 HLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN---E 392
H+ ++ + ILG GG EV+ +L+D VAVK + + L E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 393 VGILSQVNHKNLVRLLGCCVEAEQP-----LLIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
+ +NH +V + EAE P ++ EY+ TL D +H + +T
Sbjct: 63 AQNAAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRA 118
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVS 506
+ + +AL + H I HRDVK NI++ KV DFG++R +A G S
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 507 TCAQ-GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
T A GT YL PE R + +SDVYS G VL E+LT +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 42/228 (18%)
Query: 348 FSKERILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQ----VLNEVGILSQVNHK 402
F + +LG G FG+V K D A+K I+ T++ +L+EV +L+ +NH+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK-----IRHTEEKLSTILSEVXLLASLNHQ 62
Query: 403 NLVRLLGC------------CVEAEQPLLI-YEYIANGTLHDHLHGKYSSFNLTWSTRLR 449
+VR V+ + L I EY N TL+D +H + + N R
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE--NLNQQRDEYWR 120
Query: 450 IALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK---------- 499
+ Q EAL+Y+HS I HR++K NI +D+ N K+ DFGL++
Sbjct: 121 LFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 500 ---PGLSHVSTCAQGTLGYLDPEYYRNY-QLTDKSDVYSYGVVLLELL 543
PG S T A GT Y+ E +K D YS G++ E +
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 352 RILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLL 408
+ +G G F +V + G VAVK + S+ Q++ EV I+ +NH N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 409 GCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E E+ L L+ EY + G + D+L HG+ R Q A+ Y H
Sbjct: 80 EV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K+ N+LLD D N K+ADFG S G + C G Y PE ++ +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC--GAPPYAAPELFQGKK 188
Query: 526 LTD-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L L++ D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 27/221 (12%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 24 FPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKI 83
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF---------NLTW 444
L + H N+V LLG C + PL+ I E+ G L +L K + F LT
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH 504
+ + Q A+ + +L S HRD+ + NILL + K+ DFGL+R +
Sbjct: 144 EHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY 200
Query: 505 VSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
V A+ L ++ PE + T +SDV+S+GV+L E+ +
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFG ++L G A+G + ++
Sbjct: 138 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIKWMAL 192
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 35/218 (16%)
Query: 353 ILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGI--LSQVNHKNLVRLL-- 408
++G G +G VYKG L + V + KV + + Q +NE I + + H N+ R +
Sbjct: 20 LIGRGRYGAVYKGSLDERPV----AVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 409 GCCVEAE---QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
V A+ + LL+ EY NG+L +L S W + R+A LAYLH+
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLHTEL 131
Query: 466 -----YTP-IYHRDVKSTNILLDDDFNSKVADFGLS------RLAKPGLSHVSTCAQ-GT 512
Y P I HRD+ S N+L+ +D ++DFGLS RL +PG + ++ GT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 513 LGYLDPEYYRN-YQLTD------KSDVYSYGVVLLELL 543
+ Y+ PE L D + D+Y+ G++ E+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 353 ILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQVL-NEVGILSQVNHKNLVRLLGC 410
+LG+G F EV E + +VA+K ++ + + NE+ +L ++ H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 411 CVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
LI + ++ G L D + G Y+ + + R+ Q +A+ YLH
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIFQVLDAVKYLHDLG--- 136
Query: 469 IYHRDVKSTNIL---LDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K N+L LD+D ++DFGLS++ PG V + A GT GY+ PE
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQKP 194
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D +S GV+ LL
Sbjct: 195 YSKAVDCWSIGVIAYILL 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKNLVRLLGC 410
LG G FG+VYK + ++ +V+A +AKV + KS +++ + E+ IL+ +H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA--AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
++ E+ A G + D + + LT S + QT +AL YLH I
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELER-PLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY-----RNYQ 525
HRD+K+ NIL D + K+ADFG+S + + GT ++ PE ++
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSKDRP 216
Query: 526 LTDKSDVYSYGVVLLEL 542
K+DV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKNLVRLLGC 410
LG G FG+VYK + ++ +V+A +AKV + KS +++ + E+ IL+ +H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA--AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
++ E+ A G + D + + LT S + QT +AL YLH I
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELER-PLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY-----RNYQ 525
HRD+K+ NIL D + K+ADFG+S + + GT ++ PE ++
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKDRP 216
Query: 526 LTDKSDVYSYGVVLLEL 542
K+DV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 352 RILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLL 408
+ +G G F +V + G VAV+ + S+ Q++ EV I+ +NH N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 409 GCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E E+ L L+ EY + G + D+L HG+ R Q A+ Y H
Sbjct: 80 EV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K+ N+LLD D N K+ADFG S G + C G+ Y PE ++ +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKK 188
Query: 526 LTD-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L L++ D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 353 ILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQVL-NEVGILSQVNHKNLVRLLGC 410
+LG+G F EV E + +VA+K ++ + + NE+ +L ++ H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 411 CVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
LI + ++ G L D + G Y+ + + R+ Q +A+ YLH
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIFQVLDAVKYLHDLG--- 136
Query: 469 IYHRDVKSTNIL---LDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K N+L LD+D ++DFGLS++ PG V + A GT GY+ PE
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQKP 194
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D +S GV+ LL
Sbjct: 195 YSKAVDCWSIGVIAYILL 212
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 354 LGSGGFGEVY--------KGELQDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V K + T VAVK K K +++E+ ++ + HKN
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYS-----SFN--------LTWSTRLRI 450
++ LLG C + +I EY + G L ++L + S+N L+ +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A Q A + YL S HRD+ + N+L+ +D K+ADFGL+R + H+ +
Sbjct: 197 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 249
Query: 511 GTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
T G ++ PE + T +SDV+S+GV+L E+ T
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFG ++L G A+G + ++
Sbjct: 136 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIKWMAL 190
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFG ++L G A+G + ++
Sbjct: 136 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIKWMAL 190
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++L SG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + L I + + G L D++ + N+ L +Q A+ + YL
Sbjct: 84 PHVCRLLGICLTSTVQL-IMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 141 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 195
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 353 ILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQVL-NEVGILSQVNHKNLVRLLGC 410
+LG+G F EV E + +VA+K ++ + + NE+ +L ++ H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 411 CVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
LI + ++ G L D + G Y+ + + R+ Q +A+ YLH
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIFQVLDAVKYLHDLG--- 136
Query: 469 IYHRDVKSTNIL---LDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K N+L LD+D ++DFGLS++ PG V + A GT GY+ PE
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQKP 194
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D +S GV+ LL
Sbjct: 195 YSKAVDCWSIGVIAYILL 212
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 353 ILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQVL-NEVGILSQVNHKNLVRLLGC 410
+LG+G F EV E + +VA+K ++ + + NE+ +L ++ H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 411 CVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
LI + ++ G L D + G Y+ + + R+ Q +A+ YLH
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIFQVLDAVKYLHDLG--- 136
Query: 469 IYHRDVKSTNIL---LDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K N+L LD+D ++DFGLS++ PG V + A GT GY+ PE
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQKP 194
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D +S GV+ LL
Sbjct: 195 YSKAVDCWSIGVIAYILL 212
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFG ++L G A+G + ++
Sbjct: 141 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIKWMAL 195
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFG ++L G A+G + ++
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIKWMAL 188
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 354 LGSGGFGEVY--------KGELQDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V K + T VAVK K K +++E+ ++ + HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSS-----FN--------LTWSTRLRI 450
++ LLG C + +I EY + G L ++L + +N L+ +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A Q A + YL S HRD+ + N+L+ +D K+ADFGL+R + H+ +
Sbjct: 141 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 193
Query: 511 GTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
T G ++ PE + T +SDV+S+GV+L E+ T
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 352 RILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLL 408
+ +G G F +V + G VAV+ + S+ Q++ EV I+ +NH N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 409 GCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E E+ L L+ EY + G + D+L HG+ R Q A+ Y H
Sbjct: 80 EV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K+ N+LLD D N K+ADFG S G C G+ Y PE ++ +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC--GSPPYAAPELFQGKK 188
Query: 526 LTD-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L L++ D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 16/197 (8%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKNLVRLLGC 410
LG G FG+VYK + ++ +V+A +AKV + KS +++ + E+ IL+ +H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA--AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
++ E+ A G + D + + LT S + QT +AL YLH I
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELER-PLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY-----RNYQ 525
HRD+K+ NIL D + K+ADFG+S + GT ++ PE ++
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCETSKDRP 216
Query: 526 LTDKSDVYSYGVVLLEL 542
K+DV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++LGSG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + LI + + G L D++ + N+ L +Q A+ + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFG ++L G A+G + ++
Sbjct: 136 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIKWMAL 190
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++L SG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + L I + + G L D++ + N+ L +Q A+ + YL
Sbjct: 84 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 141 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 195
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSA-----KVGNIKSTQQVLNEVGILSQVNH 401
F K ++L SG FG VYKG + +G V + A + + K+ +++L+E +++ V++
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++ RLLG C+ + L I + + G L D++ + N+ L +Q A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDP 518
+ HRD+ + N+L+ + K+ DFGL++L G A+G + ++
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMAL 188
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLT 544
E + T +SDV+SYGV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 346 NGFSKERILGSGGFGEVYKG-ELQDGTVVAVK---SAKVGNIKSTQQVLNEVGILSQVNH 401
+ F R LG G FG VY E + +VA+K +++ Q+ E+ I + ++H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
N++RL + + LI EY G L+ L K +F+ + I + A+AL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQ-KSCTFDEQRTAT--IMEELADALMYC 139
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY 521
H + HRD+K N+LL K+ADFG S + P L + C GTL YL PE
Sbjct: 140 HGKK---VIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTMC--GTLDYLPPEMI 193
Query: 522 RNYQLTDKSDVYSYGVVLLELLTSQKAID 550
+K D++ GV+ ELL +
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 354 LGSGGFGEVY--------KGELQDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V K + T VAVK K K +++E+ ++ + HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSS-----FN--------LTWSTRLRI 450
++ LLG C + +I EY + G L ++L + +N L+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A Q A + YL S HRD+ + N+L+ +D K+ADFGL+R + H+ +
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 511 GTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
T G ++ PE + T +SDV+S+GV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 27/221 (12%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 24 FPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKI 83
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF---------NLTW 444
L + H N+V LLG C + PL+ I E+ G L +L K + F LT
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH 504
+ + Q A+ + +L S HRD+ + NILL + K+ DFGL+R +
Sbjct: 144 EHLICYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 200
Query: 505 VSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
V A+ L ++ PE + T +SDV+S+GV+L E+ +
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLH-----GKYSSFN--------LTWSTRLRI 450
++ LLG C + +I EY + G L ++L G S++ +T+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R ++++ +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKK 215
Query: 511 GTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
T G ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 136/311 (43%), Gaps = 47/311 (15%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 26 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKI 85
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF-----------NL 442
L + H N+V LLG C + PL+ I E+ G L +L K + F L
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFL 145
Query: 443 TWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL 502
T + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 146 TLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 503 SHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLA 561
V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P V +
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP-GVKID 257
Query: 562 IYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHE 621
+R G M D + + + C + S+RP+ +++V
Sbjct: 258 EEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
Query: 622 LQRIIEIVNQE 632
L +++ Q+
Sbjct: 305 LGNLLQANAQQ 315
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 352 RILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLL 408
+ +G G F +V + G VAVK + S+ Q++ EV I+ +NH N+V+L
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 409 GCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E E+ L L+ EY + G + D+L HG R Q A+ Y H
Sbjct: 73 EV-IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----QIVSAVQYCHQKF 126
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K+ N+LLD D N K+ADFG S G + C G+ Y PE ++ +
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKK 181
Query: 526 LTD-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L L++ D
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 19/229 (8%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKST---- 386
P ++ + ++ + N + LG+G FG+V + G AV V +KST
Sbjct: 24 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 83
Query: 387 --QQVLNEVGILSQV-NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLH-------GK 436
+ +++E+ I+S + H+N+V LLG C L+I EY G L + L K
Sbjct: 84 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 143
Query: 437 YSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR 496
L L + Q A+ +A+L S HRDV + N+LL + +K+ DFGL+R
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR 200
Query: 497 LAKPGLSH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++ V A+ + ++ PE + T +SDV+SYG++L E+ +
Sbjct: 201 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 34/223 (15%)
Query: 352 RILGSGGFGEVYKGEL------QDGTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNL 404
+ LG G FG+V K T VAVK K S + +L+E +L QVNH ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY---------------------SSFNLT 443
++L G C + LLI EY G+L L LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 444 WSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLS 503
+ A Q ++ + YL A + HRD+ + NIL+ + K++DFGLSR S
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 504 HVSTCAQGTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+V +QG + ++ E ++ T +SDV+S+GV+L E++T
Sbjct: 206 YVKR-SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 25/235 (10%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKST---- 386
P ++ + ++ + N + LG+G FG+V + G AV V +KST
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 387 --QQVLNEVGILSQV-NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLH-----GKYS 438
+ +++E+ I+S + H+N+V LLG C L+I EY G L + L G
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEY 151
Query: 439 SFN--------LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVA 490
S+N L+ L + Q A+ +A+L S HRDV + N+LL + +K+
Sbjct: 152 SYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIG 208
Query: 491 DFGLSRLAKPGLSH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
DFGL+R ++ V A+ + ++ PE + T +SDV+SYG++L E+ +
Sbjct: 209 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWSTRLRI 450
++ LLG C + +I EY + G L ++L + YS +T+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R ++++ +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKK 215
Query: 511 GTLG-----YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
T G ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 19/229 (8%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKST---- 386
P ++ + ++ + N + LG+G FG+V + G AV V +KST
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 387 --QQVLNEVGILSQV-NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLH-------GK 436
+ +++E+ I+S + H+N+V LLG C L+I EY G L + L K
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 151
Query: 437 YSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR 496
L L + Q A+ +A+L S HRDV + N+LL + +K+ DFGL+R
Sbjct: 152 EDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR 208
Query: 497 LAKPGLSH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
++ V A+ + ++ PE + T +SDV+SYG++L E+ +
Sbjct: 209 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 8/200 (4%)
Query: 354 LGSGGFGE-VYKGELQDGTVVAVKSAKVGNI--KSTQQVLNEVGILSQVNHKNLVRLLGC 410
+G G FG+ + +DG +K + + K ++ EV +L+ + H N+V+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
E ++ +Y G L ++ + L +Q AL ++H I
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVL-FQEDQILDWFVQICLALKHVHDRK---IL 147
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS 530
HRD+KS NI L D ++ DFG++R+ + C GT YL PE N +KS
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEICENKPYNNKS 206
Query: 531 DVYSYGVVLLELLTSQKAID 550
D+++ G VL EL T + A +
Sbjct: 207 DIWALGCVLYELCTLKHAFE 226
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 354 LGSGGFGEVYKGELQ--DGTVVAV-----KSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
LG G FG V +GE G V+V K + ++ + EV + ++H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L G + + + E G+L D L F L T R A+Q AE + YL S +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 132
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--VSTCAQGTLGYLDPEYYRNY 524
HRD+ + N+LL K+ DFGL R H + + + PE +
Sbjct: 133 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 525 QLTDKSDVYSYGVVLLELLT 544
+ SD + +GV L E+ T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWSTRLRI 450
++ LLG C + +I EY + G L ++L + YS +T+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKNTTN 218
Query: 511 GTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G L ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 14/199 (7%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN-EVGILSQVNHKNLV 405
F+K +G G FGEV+KG + + VVA+K + + + + E+ +LSQ + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH-GKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
+ G ++ + +I EY+ G+ D L G + F + +T L+ L+ L YLHS
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI--ATMLKEILK---GLDYLHSE 139
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
HRD+K+ N+LL + + K+ADFG++ +L + + GT ++ PE +
Sbjct: 140 KKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV--GTPFWMAPEVIQQ 194
Query: 524 YQLTDKSDVYSYGVVLLEL 542
K+D++S G+ +EL
Sbjct: 195 SAYDSKADIWSLGITAIEL 213
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 49/313 (15%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 83
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF------------- 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 441 NLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKP 500
LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYK 200
Query: 501 GLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
+V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P V
Sbjct: 201 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP-GVK 255
Query: 560 LAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVV 619
+ +R G M D + + + C + S+RP+ +++V
Sbjct: 256 IDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTFSELV 302
Query: 620 HELQRIIEIVNQE 632
L +++ Q+
Sbjct: 303 EHLGNLLQANAQQ 315
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWSTRLRI 450
++ LLG C + +I EY + G L ++L + YS +T+ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTTN 218
Query: 511 GTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G L ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 354 LGSGGFGEVYKGELQ--DGTVVAV-----KSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
LG G FG V +GE G V+V K + ++ + EV + ++H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 407 LLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L G + P+ ++ E G+L D L F L T R A+Q AE + YL S
Sbjct: 80 LYGVVLTP--PMKMVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKR 135
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--VSTCAQGTLGYLDPEYYRN 523
+ HRD+ + N+LL K+ DFGL R H + + + PE +
Sbjct: 136 FI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 524 YQLTDKSDVYSYGVVLLELLT 544
+ SD + +GV L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 354 LGSGGFGEVYKGELQ--DGTVVAV-----KSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
LG G FG V +GE G V+V K + ++ + EV + ++H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L G + + + E G+L D L F L T R A+Q AE + YL S +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 142
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--VSTCAQGTLGYLDPEYYRNY 524
HRD+ + N+LL K+ DFGL R H + + + PE +
Sbjct: 143 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 525 QLTDKSDVYSYGVVLLELLT 544
+ SD + +GV L E+ T
Sbjct: 200 TFSHASDTWMFGVTLWEMFT 219
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 136/312 (43%), Gaps = 48/312 (15%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 25 FPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 84
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF------------N 441
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 85 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF 144
Query: 442 LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPG 501
LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 502 LSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNL 560
V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P V +
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP-GVKI 256
Query: 561 AIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVH 620
+R G M D + + + C + S+RP+ +++V
Sbjct: 257 DEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
Query: 621 ELQRIIEIVNQE 632
L +++ Q+
Sbjct: 304 HLGNLLQANAQQ 315
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 49/313 (15%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 74
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF------------- 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 441 NLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKP 500
LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
Query: 501 GLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
+V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P V
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP-GVK 246
Query: 560 LAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVV 619
+ +R G M D + + + C + S+RP+ +++V
Sbjct: 247 IDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTFSELV 293
Query: 620 HELQRIIEIVNQE 632
L +++ Q+
Sbjct: 294 EHLGNLLQANAQQ 306
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 354 LGSGGFGEVYKGELQ--DGTVVAV-----KSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
LG G FG V +GE G V+V K + ++ + EV + ++H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L G + + + E G+L D L F L T R A+Q AE + YL S +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 132
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--VSTCAQGTLGYLDPEYYRNY 524
HRD+ + N+LL K+ DFGL R H + + + PE +
Sbjct: 133 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 525 QLTDKSDVYSYGVVLLELLT 544
+ SD + +GV L E+ T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 354 LGSGGFGEVYKGELQ--DGTVVAV-----KSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
LG G FG V +GE G V+V K + ++ + EV + ++H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L G + + + E G+L D L F L T R A+Q AE + YL S +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 132
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--VSTCAQGTLGYLDPEYYRNY 524
HRD+ + N+LL K+ DFGL R H + + + PE +
Sbjct: 133 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 525 QLTDKSDVYSYGVVLLELLT 544
+ SD + +GV L E+ T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 354 LGSGGFGEVYKGELQ--DGTVVAV-----KSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
LG G FG V +GE G V+V K + ++ + EV + ++H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L G + + + E G+L D L F L T R A+Q AE + YL S +
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 136
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--VSTCAQGTLGYLDPEYYRNY 524
HRD+ + N+LL K+ DFGL R H + + + PE +
Sbjct: 137 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 525 QLTDKSDVYSYGVVLLELLT 544
+ SD + +GV L E+ T
Sbjct: 194 TFSHASDTWMFGVTLWEMFT 213
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 49/313 (15%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 26 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 85
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF------------- 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKD 145
Query: 441 NLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKP 500
LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 146 FLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYK 202
Query: 501 GLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
+V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P V
Sbjct: 203 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP-GVK 257
Query: 560 LAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVV 619
+ +R G M D + + + C + S+RP+ +++V
Sbjct: 258 IDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTFSELV 304
Query: 620 HELQRIIEIVNQE 632
L +++ Q+
Sbjct: 305 EHLGNLLQANAQQ 317
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWSTRLRI 450
++ LLG C + +I EY + G L ++L + YS +T+ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTTN 218
Query: 511 GTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G L ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 350 KERILGSGGFGEVYKGELQ-----DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+++ LGSG FG V KG Q V + + + ++L E ++ Q+++ +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
VR++G C EAE +L+ E G L+ +L + ++ + + Q + + YL +
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT--LGYLDPEYYR 522
+ HRD+ + N+LL +K++DFGLS+ + ++ G + + PE
Sbjct: 147 NFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
Y+ + KSDV+S+GV++ E +
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 350 KERILGSGGFGEVYKGELQ-----DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+++ LGSG FG V KG Q V + + + ++L E ++ Q+++ +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
VR++G C EAE +L+ E G L+ +L + ++ + + Q + + YL +
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT--LGYLDPEYYR 522
+ HRD+ + N+LL +K++DFGLS+ + ++ G + + PE
Sbjct: 147 NFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
Y+ + KSDV+S+GV++ E +
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 354 LGSGGFGEVYKGELQ--DGTVVAV-----KSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
LG G FG V +GE G V+V K + ++ + EV + ++H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L G + + + E G+L D L F L T R A+Q AE + YL S +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 142
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--VSTCAQGTLGYLDPEYYRNY 524
HRD+ + N+LL K+ DFGL R H + + + PE +
Sbjct: 143 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 525 QLTDKSDVYSYGVVLLELLT 544
+ SD + +GV L E+ T
Sbjct: 200 TFSHASDTWMFGVTLWEMFT 219
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 116/259 (44%), Gaps = 29/259 (11%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQV---LNEVGILSQV 399
+ F R+LG G FG+V +++ G + AVK K I V + E ILS
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 400 -NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAEA 457
NH L +L C ++ + E++ G L H+ K F+ R R A + A
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-KSRRFD---EARARFYAAEIISA 136
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGY 515
L +LH I +RD+K N+LLD + + K+ADFG + K G+ + T A GT Y
Sbjct: 137 LMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFG---MCKEGICNGVTTATFCGTPDY 190
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIME 575
+ PE + D ++ GV+L E+L + + + DD+ AI E
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE-AENEDDLFEAILND---------E 240
Query: 576 VVDPRLQGHEASVNILMSL 594
VV P HE + IL S
Sbjct: 241 VVYPTWL-HEDATGILKSF 258
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 352 RILGSGGFGEVYKGEL------QDGTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNL 404
+ LG G FG+V K T VAVK K S + +L+E +L QVNH ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY---------------------SSFNLT 443
++L G C + LLI EY G+L L LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 444 WSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLS 503
+ A Q ++ + YL A + HRD+ + NIL+ + K++DFGLSR S
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 504 HVSTCAQGTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
V +QG + ++ E ++ T +SDV+S+GV+L E++T
Sbjct: 206 XVKR-SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 49/313 (15%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 83
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF------------- 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 441 NLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKP 500
LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 501 GLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P V
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP-GVK 255
Query: 560 LAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVV 619
+ +R G M D + + + C + S+RP+ +++V
Sbjct: 256 IDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTFSELV 302
Query: 620 HELQRIIEIVNQE 632
L +++ Q+
Sbjct: 303 EHLGNLLQANAQQ 315
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 354 LGSGGFGEVYKGELQ-DGTVVAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLG 409
LG G FG+V GE Q G VAVK K+ ++ ++ E+ L H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 410 CCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
++ EY++ G L D++ HG+ R+ Q A+ Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-----RLFQQILSAVDYCHRHM-- 131
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
+ HRD+K N+LLD N+K+ADFGLS + G ++C G+ Y PE
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC--GSPNYAAPEVISGRLYA 188
Query: 528 D-KSDVYSYGVVLLELLTSQKAIDFSRDP 555
+ D++S GV+L LL D P
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 350 KERILGSGGFGEVYKGELQ-----DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+++ LGSG FG V KG Q V + + + ++L E ++ Q+++ +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
VR++G C EAE +L+ E G L+ +L + ++ + + Q + + YL +
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES 144
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT--LGYLDPEYYR 522
+ HRD+ + N+LL +K++DFGLS+ + ++ G + + PE
Sbjct: 145 NFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 201
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
Y+ + KSDV+S+GV++ E +
Sbjct: 202 YYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 353 ILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+LG G +G VY G +L + +A+K + + +Q + E+ + + HKN+V+ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
E + E + G+L L K+ T Q E L YLH I H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVH 145
Query: 472 RDVKSTNILLDDDFNS-KVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYY----RNYQ 525
RD+K N+L++ K++DFG S RLA G++ + GTL Y+ PE R Y
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEIIDKGPRGY- 202
Query: 526 LTDKSDVYSYGVVLLELLTSQ 546
+D++S G ++E+ T +
Sbjct: 203 -GKAADIWSLGCTIIEMATGK 222
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 127 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 352 RILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLL 408
+ +G G F +V + G VAVK + S+ Q++ EV I +NH N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 409 GCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E E+ L L+ EY + G + D+L HG+ R Q A+ Y H
Sbjct: 80 EV-IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----QIVSAVQYCHQKF 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K+ N+LLD D N K+ADFG S G + C G Y PE ++ +
Sbjct: 134 ---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC--GAPPYAAPELFQGKK 188
Query: 526 LTD-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L L++ D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 350 KERILGSGGFGEVYKGELQ-----DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+++ LGSG FG V KG Q V + + + ++L E ++ Q+++ +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
VR++G C EAE +L+ E G L+ +L + ++ + + Q + + YL +
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES 136
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT--LGYLDPEYYR 522
+ HRD+ + N+LL +K++DFGLS+ + ++ G + + PE
Sbjct: 137 NFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
Y+ + KSDV+S+GV++ E +
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 352 RILGSGGFGEVYKGEL------QDGTVVAVKSAKVGNIKST-QQVLNEVGILSQVNHKNL 404
+ LG G FG+V K T VAVK K S + +L+E +L QVNH ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY---------------------SSFNLT 443
++L G C + LLI EY G+L L LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 444 WSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLS 503
+ A Q ++ + YL A + HRD+ + NIL+ + K++DFGLSR S
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 504 HVSTCAQGTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
V +QG + ++ E ++ T +SDV+S+GV+L E++T
Sbjct: 206 XVKR-SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 12/213 (5%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLNEV 393
I + + KK F K +G G G VY ++ G VA++ + + ++NE+
Sbjct: 12 IVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 394 GILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQ 453
++ + + N+V L + ++ ++ EY+A G+L D + + + + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRE 124
Query: 454 TAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTL 513
+AL +LHS + HRD+KS NILL D + K+ DFG P S ST GT
Sbjct: 125 CLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTP 180
Query: 514 GYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
++ PE K D++S G++ +E++ +
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 14/206 (6%)
Query: 342 KKATNGFSKERILGSGGFGEVYK-GELQDGTVVAVKSAK---VGNIKSTQQVLNEVGILS 397
K + F R LG+G FG V+ +G A+K K V +K + +E +LS
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
V H ++R+ G +A+Q +I +YI G L L N A + A
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN---PVAKFYAAEVCLA 118
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
L YLHS I +RD+K NILLD + + K+ DFG ++ + V+ GT Y+
Sbjct: 119 LEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY----VPDVTYXLCGTPDYIA 171
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELL 543
PE D +S+G+++ E+L
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEML 197
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 16/200 (8%)
Query: 352 RILGS-GGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKNLVRL 407
I+G G FG+VYK + ++ +V+A +AKV + KS +++ + E+ IL+ +H N+V+L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLA--AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 72
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
L ++ E+ A G + D + + LT S + QT +AL YLH
Sbjct: 73 LDAFYYENNLWILIEFCAGGAV-DAVMLELER-PLTESQIQVVCKQTLDALNYLHD---N 127
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY-----R 522
I HRD+K+ NIL D + K+ADFG+S GT ++ PE +
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 523 NYQLTDKSDVYSYGVVLLEL 542
+ K+DV+S G+ L+E+
Sbjct: 188 DRPYDYKADVWSLGITLIEM 207
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 49/313 (15%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 120
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF------------- 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 121 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 180
Query: 441 NLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKP 500
LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 181 FLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYK 237
Query: 501 GLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
+V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P V
Sbjct: 238 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP-GVK 292
Query: 560 LAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVV 619
+ +R G M D + + + C + S+RP+ +++V
Sbjct: 293 IDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTFSELV 339
Query: 620 HELQRIIEIVNQE 632
L +++ Q+
Sbjct: 340 EHLGNLLQANAQQ 352
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 49/313 (15%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 74
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF------------- 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 441 NLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKP 500
LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
Query: 501 GLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
+V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P V
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP-GVK 246
Query: 560 LAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVV 619
+ +R G M D + + + C + S+RP+ +++V
Sbjct: 247 IDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTFSELV 293
Query: 620 HELQRIIEIVNQE 632
L +++ Q+
Sbjct: 294 EHLGNLLQANAQQ 306
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQV-NHKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWSTRLRI 450
++ LLG C + +I EY + G L ++L + YS +T+ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R + +
Sbjct: 209 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTTN 264
Query: 511 GTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G L ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNI-------KSTQQVLNEVGILSQVNHKNLVR 406
LG GG VY L + T++ +K A ++ ++ EV SQ++H+N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
++ E + L+ EYI TL +++ HG L+ T + Q + + + H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP-----LSVDTAINFTNQILDGIKHAHDM 130
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDPEYYRN 523
I HRD+K NIL+D + K+ DFG+++ L++ L+ + GT+ Y PE +
Sbjct: 131 R---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL-GTVQYFSPEQAKG 186
Query: 524 YQLTDKSDVYSYGVVLLELLTSQ 546
+ +D+YS G+VL E+L +
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGE 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 350 KERILGSGGFGEVYKGELQ-----DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+++ LGSG FG V KG Q V + + + ++L E ++ Q+++ +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
VR++G C EAE +L+ E G L+ +L + ++ + + Q + + YL +
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES 130
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT--LGYLDPEYYR 522
+ HRD+ + N+LL +K++DFGLS+ + ++ G + + PE
Sbjct: 131 NFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 187
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
Y+ + KSDV+S+GV++ E +
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 350 KERILGSGGFGEVYKGELQ-----DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+++ LGSG FG V KG Q V + + + ++L E ++ Q+++ +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
VR++G C EAE +L+ E G L+ +L + ++ + + Q + + YL +
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES 126
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT--LGYLDPEYYR 522
+ HRD+ + N+LL +K++DFGLS+ + ++ G + + PE
Sbjct: 127 NFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 183
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
Y+ + KSDV+S+GV++ E +
Sbjct: 184 YYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 350 KERILGSGGFGEVYKGELQ-----DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+++ LGSG FG V KG Q V + + + ++L E ++ Q+++ +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
VR++G C EAE +L+ E G L+ +L + ++ + + Q + + YL +
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES 124
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT--LGYLDPEYYR 522
+ HRD+ + N+LL +K++DFGLS+ + ++ G + + PE
Sbjct: 125 NFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 181
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
Y+ + KSDV+S+GV++ E +
Sbjct: 182 YYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWSTRLRI 450
++ LLG C + +I EY + G L ++L + YS +T+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ ++ADFGL+R + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMRIADFGLARDIN-NIDYYKKTTN 218
Query: 511 GTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G L ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 350 KERILGSGGFGEVYKGELQ-----DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+++ LGSG FG V KG Q V + + + ++L E ++ Q+++ +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
VR++G C EAE +L+ E G L+ +L + ++ + + Q + + YL +
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES 488
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT--LGYLDPEYYR 522
+ HRD+ + N+LL +K++DFGLS+ + ++ G + + PE
Sbjct: 489 NFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 545
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
Y+ + KSDV+S+GV++ E +
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 49/313 (15%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 74
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF------------- 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 441 NLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKP 500
LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
Query: 501 GLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P V
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP-GVK 246
Query: 560 LAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVV 619
+ +R G M D + + + C + S+RP+ +++V
Sbjct: 247 IDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTFSELV 293
Query: 620 HELQRIIEIVNQE 632
L +++ Q+
Sbjct: 294 EHLGNLLQANAQQ 306
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 354 LGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 409 GCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
G E L EY + G L D + + R Q + YLH T
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGIT- 126
Query: 469 IYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQL- 526
HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 127 --HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 527 TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 350 KERILGSGGFGEVYKGELQ-----DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+++ LGSG FG V KG Q V + + + ++L E ++ Q+++ +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
VR++G C EAE +L+ E G L+ +L + ++ + + Q + + YL +
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES 489
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT--LGYLDPEYYR 522
+ HRD+ + N+LL +K++DFGLS+ + ++ G + + PE
Sbjct: 490 NFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 546
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
Y+ + KSDV+S+GV++ E +
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 353 ILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+LG G +G VY G +L + +A+K + + +Q + E+ + + HKN+V+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
E + E + G+L L K+ T Q E L YLH I H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVH 131
Query: 472 RDVKSTNILLDDDFNS-KVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYY----RNYQ 525
RD+K N+L++ K++DFG S RLA G++ + GTL Y+ PE R Y
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEIIDKGPRGY- 188
Query: 526 LTDKSDVYSYGVVLLELLTSQ 546
+D++S G ++E+ T +
Sbjct: 189 -GKAADIWSLGCTIIEMATGK 208
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 49/313 (15%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 83
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF------------- 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 441 NLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKP 500
LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYK 200
Query: 501 GLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P V
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP-GVK 255
Query: 560 LAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVV 619
+ +R G M D + + + C + S+RP+ +++V
Sbjct: 256 IDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTFSELV 302
Query: 620 HELQRIIEIVNQE 632
L +++ Q+
Sbjct: 303 EHLGNLLQANAQQ 315
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Query: 350 KERILGSGGFGEVYKGELQ-----DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+++ LGSG FG V KG Q V + + + ++L E ++ Q+++ +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
VR++G C EAE +L+ E G L+ +L + ++ + + Q + + YL +
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES 130
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHVSTCAQGTLGYLDPEYYR 522
+ HRD+ + N+LL +K++DFGLS+ A T + + + PE
Sbjct: 131 NFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECIN 187
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
Y+ + KSDV+S+GV++ E +
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 49/313 (15%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 74
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF------------- 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 441 NLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKP 500
LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
Query: 501 GLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P V
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP-GVK 246
Query: 560 LAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVV 619
+ +R G M D + + + C + S+RP+ +++V
Sbjct: 247 IDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTFSELV 293
Query: 620 HELQRIIEIVNQE 632
L +++ Q+
Sbjct: 294 EHLGNLLQANAQQ 306
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 346 NGFSKERILGSGGFGEVYKGELQ-DGTVV--AVKSAKVGNIKSTQQ-VLNEVGILSQV-N 400
N + ++G G FG+V K ++ DG + A+K K K + E+ +L ++ +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 401 HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK--------YSSFNLTWSTR----- 447
H N++ LLG C L EY +G L D L ++ N T ST
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVST 507
L A A + YL + HRD+ + NIL+ +++ +K+ADFGLSR +
Sbjct: 135 LHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRGQE-------V 184
Query: 508 CAQGTLGYLDPEYYR----NYQL-TDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
+ T+G L + NY + T SDV+SYGV+L E+++ +
Sbjct: 185 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-------------LGGTP 231
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
Y + E+ + QG+ + +++ +L C REK ERPS ++ L
Sbjct: 232 YCGMTCA-----ELYEKLPQGYRLEKPLNCDDEVY-DLMRQCWREKPYERPSFAQILVSL 285
Query: 623 QRIIE 627
R++E
Sbjct: 286 NRMLE 290
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 134/305 (43%), Gaps = 52/305 (17%)
Query: 346 NGFSKERILGSGGFGEVYKGELQ-DGTVV--AVKSAKVGNIKSTQQ-VLNEVGILSQVNH 401
N + ++G G FG+V K ++ DG + A+K K K + E+ +L ++ H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 402 K-NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK--------YSSFNLTWSTR----- 447
N++ LLG C L EY +G L D L ++ N T ST
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVST 507
L A A + YL + HRD+ + NIL+ +++ +K+ADFGLSR +
Sbjct: 145 LHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRGQE-------V 194
Query: 508 CAQGTLGYLDPEYYR----NYQL-TDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
+ T+G L + NY + T SDV+SYGV+L E+++ +
Sbjct: 195 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-------------LGGTP 241
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
Y + E+ + QG+ + +++ +L C REK ERPS ++ L
Sbjct: 242 YCGMTCA-----ELYEKLPQGYRLEKPLNCDDEVY-DLMRQCWREKPYERPSFAQILVSL 295
Query: 623 QRIIE 627
R++E
Sbjct: 296 NRMLE 300
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 354 LGSGGFGEVYKGELQ-DGTVVAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLG 409
LG G FG+V GE Q G VAVK K+ ++ ++ E+ L H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 410 CCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
++ EY++ G L D++ HG+ R+ Q A+ Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-----RLFQQILSAVDYCHRHM-- 131
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
+ HRD+K N+LLD N+K+ADFGLS + G +C G+ Y PE
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC--GSPNYAAPEVISGRLYA 188
Query: 528 D-KSDVYSYGVVLLELLTSQKAIDFSRDP 555
+ D++S GV+L LL D P
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 20/231 (8%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKST-QQVLNEVGIL 396
K+ + + +G+GGF +V + G +VA+K + S ++ E+ L
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 397 SQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAE 456
+ H+++ +L A + ++ EY G L D++ S L+ + Q
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYI---ISQDRLSEEETRVVFRQIVS 119
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLS---HVSTCAQGTL 513
A+AY+HS Y HRD+K N+L D+ K+ DFGL AKP + H+ TC G+L
Sbjct: 120 AVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLC--AKPKGNKDYHLQTCC-GSL 173
Query: 514 GYLDPEYYRNYQ-LTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIY 563
Y PE + L ++DV+S G++L L+ D DD +A+Y
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD-----DDNVMALY 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 101/221 (45%), Gaps = 18/221 (8%)
Query: 337 HLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN---E 392
H+ ++ + ILG GG EV+ +L+ VAVK + + L E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 393 VGILSQVNHKNLVRLLGCCVEAEQP-----LLIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
+ +NH +V + EAE P ++ EY+ TL D +H + +T
Sbjct: 63 AQNAAALNHPAIVAVYATG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRA 118
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVS 506
+ + +AL + H I HRDVK NI++ KV DFG++R +A G S
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 507 TCAQ-GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
T A GT YL PE R + +SDVYS G VL E+LT +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWSTRLRI 450
++ LLG C + +I EY + G L ++L + YS +T+ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R + +
Sbjct: 150 TYQLARGMEYLASQK---CIHRDLTARNVLVTENNVMKIADFGLARDIN-NIDYYKKTTN 205
Query: 511 GTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G L ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWSTRLRI 450
++ LLG C + +I EY + G L ++L + YS +T+ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R + +
Sbjct: 155 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTTN 210
Query: 511 GTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G L ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWSTRLRI 450
++ LLG C + +I EY + G L ++L + YS +T+ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R + +
Sbjct: 152 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTTN 207
Query: 511 GTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G L ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 126 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAK-------VGNIKSTQQVLNEVGILSQ 398
LG G FG+V E ++ VAVK K + ++ S +++ +G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG---- 98
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWS 445
HKN++ LLG C + +I EY + G L ++L + YS +T+
Sbjct: 99 -KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 446 TRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV 505
+ Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R + +
Sbjct: 158 DLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYY 213
Query: 506 STCAQGTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G L ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 126 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 9/190 (4%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG G +G VYK + G +VA+K V + Q+++ E+ I+ Q + ++V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+ ++ EY G++ D + + + LT I T + L YLH + HR
Sbjct: 95 KNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHR 149
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+K+ NILL+ + ++K+ADFG++ ++ + GT ++ PE + +D+
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-GTPFWMAPEVIQEIGYNCVADI 208
Query: 533 YSYGVVLLEL 542
+S G+ +E+
Sbjct: 209 WSLGITAIEM 218
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 354 LGSGGFGEVYKGELQ-DGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLLGC 410
+G+G +G K + DG ++ K G++ Q +++EV +L ++ H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 411 CVEAEQPLL--IYEYIANGTLHDHL-HGKYSSFNLTWSTRLRIALQTAEALAYLH--SAA 465
++ L + EY G L + G L LR+ Q AL H S
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLG---YLDPEYYR 522
+ HRD+K N+ LD N K+ DFGL+R+ L+H ++ A+ +G Y+ PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI----LNHDTSFAKAFVGTPYYMSPEQMN 189
Query: 523 NYQLTDKSDVYSYGVVLLEL 542
+KSD++S G +L EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGNIKSTQQ-VLNEVGILSQVNHKNLV 405
F + LG+G F EV E + G + AVK +K + + NE+ +L ++ H+N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L L+ + ++ G L D + K ST +R Q +A+ YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR---QVLDAVYYLHRMG 140
Query: 466 YTPIYHRDVKSTNILL---DDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I HRD+K N+L D++ ++DFGLS++ G V + A GT GY+ PE
Sbjct: 141 ---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLA 195
Query: 523 NYQLTDKSDVYSYGVVLLELL 543
+ D +S GV+ LL
Sbjct: 196 QKPYSKAVDCWSIGVIAYILL 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 354 LGSGGFGEVYKGELQ-DGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLLGC 410
+G+G +G K + DG ++ K G++ Q +++EV +L ++ H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 411 CVEAEQPLL--IYEYIANGTLHDHL-HGKYSSFNLTWSTRLRIALQTAEALAYLH--SAA 465
++ L + EY G L + G L LR+ Q AL H S
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+K N+ LD N K+ DFGL+R+ S T GT Y+ PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMS 192
Query: 526 LTDKSDVYSYGVVLLEL 542
+KSD++S G +L EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 352 RILGSGGFGEVYK----GELQDGTV--VAVKSAKVGNIKSTQQVL-NEVGILSQV-NHKN 403
++LGSG FG+V G + G VAVK K S ++ L +E+ +++Q+ +H+N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN--------------------LT 443
+V LLG C + LI+EY G L ++L K F+ LT
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 444 WSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLS 503
+ L A Q A+ + +L + HRD+ + N+L+ K+ DFGL+R +
Sbjct: 171 FEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 504 H-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+ V A+ + ++ PE T KSDV+SYG++L E+ +
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 354 LGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVRLL 408
LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 409 GCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
G E L EY + G L D + + R Q + YLH T
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGIT- 126
Query: 469 IYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQL- 526
HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 127 --HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 527 TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 101/221 (45%), Gaps = 18/221 (8%)
Query: 337 HLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN---E 392
H+ ++ + ILG GG EV+ +L+ VAVK + + L E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 393 VGILSQVNHKNLVRLLGCCVEAEQP-----LLIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
+ +NH +V + EAE P ++ EY+ TL D +H + +T
Sbjct: 63 AQNAAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRA 118
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVS 506
+ + +AL + H I HRDVK NI++ KV DFG++R +A G S
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 507 TCAQ-GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
T A GT YL PE R + +SDVYS G VL E+LT +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 126 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 34/276 (12%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN-EVGILSQVNHKNLV 405
F+K +G G FGEVYKG + VVA+K + + + + E+ +LSQ + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTW-STRLRIALQTAEALAYLHSA 464
R G +++ + +I EY+ G+ D L K T+ +T LR L+ L YLHS
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILK---GLDYLHSE 135
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
HRD+K+ N+LL + + K+ADFG++ +L + GT ++ PE +
Sbjct: 136 RKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV--GTPFWMAPEVIKQ 190
Query: 524 YQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQG 583
K+D++S G+ +EL + + D + + + + + P L+G
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPP---NSDLHPMRVLFLIPKNSP---------PTLEG 238
Query: 584 HEASVNILMSLKLFSELAVACLREKKSERPSMTDVV 619
+ K F E ACL + RP+ +++
Sbjct: 239 QHS--------KPFKEFVEACLNKDPRFRPTAKELL 266
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 102/224 (45%), Gaps = 18/224 (8%)
Query: 334 RIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN- 391
R H+ ++ + ILG GG EV+ +L+ VAVK + + L
Sbjct: 17 RGSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRF 76
Query: 392 --EVGILSQVNHKNLVRLLGCCVEAEQP-----LLIYEYIANGTLHDHLHGKYSSFNLTW 444
E + +NH +V + EAE P ++ EY+ TL D +H + +T
Sbjct: 77 RREAQNAAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTP 132
Query: 445 STRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLS 503
+ + +AL + H I HRDVK NI++ KV DFG++R +A G S
Sbjct: 133 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 189
Query: 504 HVSTCAQ-GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
T A GT YL PE R + +SDVYS G VL E+LT +
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I + +NH+N+V+
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 127 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 127 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 12/225 (5%)
Query: 323 LKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVG 381
+ I K I + + KK F K +G G G VY ++ G VA++ +
Sbjct: 1 MSDEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQ 57
Query: 382 NIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFN 441
+ ++NE+ ++ + + N+V L + ++ ++ EY+A G+L D + +
Sbjct: 58 QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----TETC 113
Query: 442 LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPG 501
+ + + +AL +LHS + HRD+KS NILL D + K+ DFG P
Sbjct: 114 MDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 170
Query: 502 LSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
S S GT ++ PE K D++S G++ +E++ +
Sbjct: 171 QSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 11 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 68 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 124
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 125 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 337 HLKE--LKKATNGFSKERILGSGGFGEVYKGELQDGT----VVAVKSAKVGNIKSTQQVL 390
H+KE K + F ++LG G FG+V+ + G+ + A+K K +K +V
Sbjct: 13 HVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR 72
Query: 391 N--EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRL 448
E IL +VNH +V+L + LI +++ G L L K F +
Sbjct: 73 TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFT-EEDVKF 130
Query: 449 RIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTC 508
+A + A AL +LHS I +RD+K NILLD++ + K+ DFGLS K + H
Sbjct: 131 YLA-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKA 183
Query: 509 AQ--GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTS 545
GT+ Y+ PE T +D +S+GV++ E+LT
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 337 HLKE--LKKATNGFSKERILGSGGFGEVYKGELQDGT----VVAVKSAKVGNIKSTQQVL 390
H+KE K + F ++LG G FG+V+ + G+ + A+K K +K +V
Sbjct: 13 HVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR 72
Query: 391 N--EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRL 448
E IL +VNH +V+L + LI +++ G L L K F +
Sbjct: 73 TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFT-EEDVKF 130
Query: 449 RIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTC 508
+A + A AL +LHS I +RD+K NILLD++ + K+ DFGLS K + H
Sbjct: 131 YLA-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKA 183
Query: 509 AQ--GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTS 545
GT+ Y+ PE T +D +S+GV++ E+LT
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 127 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 127 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 127 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 337 HLKE--LKKATNGFSKERILGSGGFGEVYKGELQDGT----VVAVKSAKVGNIKSTQQVL 390
H+KE K + F ++LG G FG+V+ + G+ + A+K K +K +V
Sbjct: 14 HVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR 73
Query: 391 N--EVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRL 448
E IL +VNH +V+L + LI +++ G L L K F +
Sbjct: 74 TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFT-EEDVKF 131
Query: 449 RIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTC 508
+A + A AL +LHS I +RD+K NILLD++ + K+ DFGLS K + H
Sbjct: 132 YLA-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKA 184
Query: 509 AQ--GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTS 545
GT+ Y+ PE T +D +S+GV++ E+LT
Sbjct: 185 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 126 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
F + ++GSGGFG+V+K + + DG +K K N K+ + EV L++++H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 407 LLGCCVEAEQP----------------LLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI 450
GC + + E+ GTL + K L L +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-KRRGEKLDKVLALEL 127
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCA 509
Q + + Y+HS + +RD+K +NI L D K+ DFGL + L G S
Sbjct: 128 FEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--- 181
Query: 510 QGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
+GTL Y+ PE + + D+Y+ G++L ELL
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 127 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 126 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 126 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 12/213 (5%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLNEV 393
I + + KK F K +G G G VY ++ G VA++ + + ++NE+
Sbjct: 13 IVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 394 GILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQ 453
++ + + N+V L + ++ ++ EY+A G+L D + + + + +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRE 125
Query: 454 TAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTL 513
+AL +LHS + HR++KS NILL D + K+ DFG P S ST GT
Sbjct: 126 CLQALEFLHS---NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTP 181
Query: 514 GYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
++ PE K D++S G++ +E++ +
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 29/216 (13%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWSTRLRI 450
++ LLG C + +I Y + G L ++L + YS +T+ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTTN 218
Query: 511 GTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G L ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLNEV 393
I + + KK F K +G G G VY ++ G VA++ + + ++NE+
Sbjct: 12 IVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 394 GILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQ 453
++ + + N+V L + ++ ++ EY+A G+L D + + + + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRE 124
Query: 454 TAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTL 513
+AL +LHS + HRD+KS NILL D + K+ DFG P S S GT
Sbjct: 125 CLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTP 180
Query: 514 GYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
++ PE K D++S G++ +E++ +
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 126 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 126 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 126 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 112/239 (46%), Gaps = 25/239 (10%)
Query: 357 GGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC-----C 411
G FG V+K +L + VAVK + + +S Q EV L + H+N+++ +G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY-EVYSLPGMKHENILQFIGAEKRGTS 92
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSA------A 465
V+ + LI + G+L D L S W+ IA A LAYLH
Sbjct: 93 VDVDL-WLITAFHEKGSLSDFLKANVVS----WNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 466 YTP-IYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ-GTLGYLDPEYYR- 522
+ P I HRD+KS N+LL ++ + +ADFGL+ + G S T Q GT Y+ PE
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG 207
Query: 523 --NYQLTD--KSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVV 577
N+Q + D+Y+ G+VL EL + A D D + + Q S + EVV
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVV 266
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G +GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 127 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQV---LNEVGI 395
++K F ++LG G FG+V+ E + A+K+ K + V + E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 396 LSQVNHKNLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQT 454
LS + + C + ++ L + EY+ G L H+ + F+L+ +T A +
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATF--YAAEI 128
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLG 514
L +LHS I +RD+K NILLD D + K+ADFG+ + G + + GT
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC-GTPD 184
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y+ PE + D +S+GV+L E+L Q
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 13/171 (7%)
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHD---HL--HGKYSS 439
S ++L E+ +SQ +H N+V V ++ L+ + ++ G++ D H+ G++ S
Sbjct: 56 SMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKS 115
Query: 440 FNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK 499
L ST I + E L YLH HRDVK+ NILL +D + ++ADFG+S
Sbjct: 116 GVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLA 172
Query: 500 PG----LSHVSTCAQGTLGYLDPEYYRNYQLTD-KSDVYSYGVVLLELLTS 545
G + V GT ++ PE + D K+D++S+G+ +EL T
Sbjct: 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLNEV 393
I + + KK F K +G G G VY ++ G VA++ + + ++NE+
Sbjct: 12 IVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 394 GILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQ 453
++ + + N+V L + ++ ++ EY+A G+L D + + + + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRE 124
Query: 454 TAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTL 513
+AL +LHS + HRD+KS NILL D + K+ DFG P S S GT
Sbjct: 125 CLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTP 180
Query: 514 GYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
++ PE K D++S G++ +E++ +
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 13/171 (7%)
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHD---HL--HGKYSS 439
S ++L E+ +SQ +H N+V V ++ L+ + ++ G++ D H+ G++ S
Sbjct: 51 SMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKS 110
Query: 440 FNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK 499
L ST I + E L YLH HRDVK+ NILL +D + ++ADFG+S
Sbjct: 111 GVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLA 167
Query: 500 PG----LSHVSTCAQGTLGYLDPEYYRNYQLTD-KSDVYSYGVVLLELLTS 545
G + V GT ++ PE + D K+D++S+G+ +EL T
Sbjct: 168 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 32/242 (13%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKST---- 386
P ++ + ++ + N + LG+G FG+V + G AV V +KST
Sbjct: 17 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 76
Query: 387 --QQVLNEVGILSQVN-HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSF--- 440
+ +++E+ I+S + H+N+V LLG C L+I EY G L + L K +
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 441 -----------------NLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDD 483
L L + Q A+ +A+L S HRDV + N+LL +
Sbjct: 137 SLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTN 193
Query: 484 DFNSKVADFGLSRLAKPGLSH-VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+K+ DFGL+R ++ V A+ + ++ PE + T +SDV+SYG++L E+
Sbjct: 194 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253
Query: 543 LT 544
+
Sbjct: 254 FS 255
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 353 ILGSGGFGEVYKGE----LQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
+LG G FGEV K + Q+ V + A N K T +L EV +L +++H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLF 87
Query: 409 GCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
++ ++ E G L D + ++S + RI Q + Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITYMHKHN- 141
Query: 467 TPIYHRDVKSTNILLDD---DFNSKVADFGLSRLAKPGLSHVSTCAQ---------GTLG 514
I HRD+K NILL+ D + K+ DFGL STC Q GT
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGL-----------STCFQQNTKMKDRIGTAY 188
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
Y+ PE R +K DV+S GV+L LL+
Sbjct: 189 YIAPEVLRG-TYDEKCDVWSAGVILYILLS 217
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 353 ILGSGGFGEVYKGE----LQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
+LG G FGEV K + Q+ V + A N K T +L EV +L +++H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLF 87
Query: 409 GCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
++ ++ E G L D + ++S + RI Q + Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITYMHKHN- 141
Query: 467 TPIYHRDVKSTNILLDD---DFNSKVADFGLSRLAKPGLSHVSTCAQ---------GTLG 514
I HRD+K NILL+ D + K+ DFGL STC Q GT
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGL-----------STCFQQNTKMKDRIGTAY 188
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
Y+ PE R +K DV+S GV+L LL+
Sbjct: 189 YIAPEVLRG-TYDEKCDVWSAGVILYILLS 217
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 52/305 (17%)
Query: 346 NGFSKERILGSGGFGEVYKGELQ-DGTVV--AVKSAKVGNIKSTQQ-VLNEVGILSQVNH 401
N + ++G G FG+V K ++ DG + A+K K K + E+ +L ++ H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 402 K-NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK--------YSSFNLTWSTR----- 447
N++ LLG C L EY +G L D L ++ N T ST
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVST 507
L A A + YL + HR++ + NIL+ +++ +K+ADFGLSR +
Sbjct: 142 LHFAADVARGMDYLSQKQFI---HRNLAARNILVGENYVAKIADFGLSRGQE-------V 191
Query: 508 CAQGTLGYLDPEYYR----NYQL-TDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
+ T+G L + NY + T SDV+SYGV+L E+++ +
Sbjct: 192 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-------------LGGTP 238
Query: 563 YVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHEL 622
Y + E+ + QG+ + +++ +L C REK ERPS ++ L
Sbjct: 239 YCGMTCA-----ELYEKLPQGYRLEKPLNCDDEVY-DLMRQCWREKPYERPSFAQILVSL 292
Query: 623 QRIIE 627
R++E
Sbjct: 293 NRMLE 297
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 29/216 (13%)
Query: 354 LGSGGFGEVYKGEL--------QDGTVVAVKSAKV-GNIKSTQQVLNEVGILSQVN-HKN 403
LG G FG+V E ++ VAVK K K +++E+ ++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK------YS-------SFNLTWSTRLRI 450
++ LLG C + +I Y + G L ++L + YS +T+ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
Q A + YL S HRD+ + N+L+ ++ K+ADFGL+R + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTTN 218
Query: 511 GTL--GYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
G L ++ PE + T +SDV+S+GV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQV---LNEVGI 395
++K F ++LG G FG+V+ E + A+K+ K + V + E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 396 LSQVNHKNLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQT 454
LS + + C + ++ L + EY+ G L H+ + F+L+ +T A +
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATF--YAAEI 127
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLG 514
L +LHS I +RD+K NILLD D + K+ADFG+ + G + + GT
Sbjct: 128 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC-GTPD 183
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y+ PE + D +S+GV+L E+L Q
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 352 RILGSGGFGEVY--KGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLG 409
+LGSG F EV+ K L G + A+K K + NE+ +L ++ H+N+V L
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 410 CCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
L+ + ++ G L D + G Y+ + + + Q A+ YLH
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS-----LVIQQVLSAVKYLHENG-- 126
Query: 468 PIYHRDVKSTNIL-LDDDFNSK--VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNY 524
I HRD+K N+L L + NSK + DFGLS++ + G + + A GT GY+ PE
Sbjct: 127 -IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLAQK 182
Query: 525 QLTDKSDVYSYGVVLLELL 543
+ D +S GV+ LL
Sbjct: 183 PYSKAVDCWSIGVITYILL 201
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 21/219 (9%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEV---YKGELQD--GTVVAVKSAKVGNIKSTQQV 389
IF + LK + LG G FG V L D G +VAVK + +
Sbjct: 3 IFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 55
Query: 390 LNEVGILSQVNHKNLVRLLGCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
E+ IL ++ +V+ G +P L+ EY+ +G L D L + L S
Sbjct: 56 QREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA--RLDASRL 113
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL--AKPGLSHV 505
L + Q + + YL S HRD+ + NIL++ + + K+ADFGL++L V
Sbjct: 114 LLYSSQICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVV 170
Query: 506 STCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
Q + + PE + + +SDV+S+GVVL EL T
Sbjct: 171 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 354 LGSGGFGEVYKGELQ-DGTVVAVKSAKVGNIKST--QQVLNEVGILSQVNHKNLVRLLGC 410
+G+G +G K + DG ++ K G++ Q +++EV +L ++ H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 411 CVEAEQPLL--IYEYIANGTLHDHL-HGKYSSFNLTWSTRLRIALQTAEALAYLH--SAA 465
++ L + EY G L + G L LR+ Q AL H S
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYLDPEYYR 522
+ HRD+K N+ LD N K+ DFGL+R+ L+H A+ GT Y+ PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI----LNHDEDFAKEFVGTPYYMSPEQMN 189
Query: 523 NYQLTDKSDVYSYGVVLLEL 542
+KSD++S G +L EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 42/227 (18%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
F + ++GSGGFG+V+K + + DG ++ K N K+ + EV L++++H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 407 LLGC-------------CVEAEQP----------------LLIYEYIANGTLHDHLHGKY 437
GC +E+ + E+ GTL + +
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 438 SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL-SR 496
L L + Q + + Y+HS + HRD+K +NI L D K+ DFGL +
Sbjct: 130 GE-KLDKVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 497 LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
L G T ++GTL Y+ PE + + D+Y+ G++L ELL
Sbjct: 186 LKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 353 ILGSGGFGEVYKGE----LQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
+LG G FGEV K + Q+ V + A N K T +L EV +L +++H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLF 87
Query: 409 GCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
++ ++ E G L D + ++S + RI Q + Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITYMHKHN- 141
Query: 467 TPIYHRDVKSTNILLDD---DFNSKVADFGLSRLAKPGLSHVSTCAQ---------GTLG 514
I HRD+K NILL+ D + K+ DFGL STC Q GT
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGL-----------STCFQQNTKMKDRIGTAY 188
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
Y+ PE R +K DV+S GV+L LL+
Sbjct: 189 YIAPEVLRG-TYDEKCDVWSAGVILYILLS 217
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 32/231 (13%)
Query: 338 LKELKKATNGFSKERILGSGGFGEVYKGEL------QDGTVVAVKSAK---VGNIKSTQQ 388
LKE+ + F +E LG FG+VYKG L + VA+K+ K G ++ ++
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR--EE 75
Query: 389 VLNEVGILSQVNHKNLVRLLGCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWS 445
+E + +++ H N+V LLG V +QPL +I+ Y ++G LH+ L +S T
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGV-VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 446 TR-----------LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL 494
R + + Q A + YL S + H+D+ + N+L+ D N K++D GL
Sbjct: 135 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGL 191
Query: 495 SR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
R + + + + ++ PE + + SD++SYGVVL E+ +
Sbjct: 192 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + +G+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTIGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
KVADFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 KVADFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 32/231 (13%)
Query: 338 LKELKKATNGFSKERILGSGGFGEVYKGEL------QDGTVVAVKSAK---VGNIKSTQQ 388
LKE+ + F +E LG FG+VYKG L + VA+K+ K G ++ ++
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR--EE 58
Query: 389 VLNEVGILSQVNHKNLVRLLGCCVEAEQPL-LIYEYIANGTLHDHL--HGKYSSFNLTWS 445
+E + +++ H N+V LLG V +QPL +I+ Y ++G LH+ L +S T
Sbjct: 59 FRHEAMLRARLQHPNVVCLLGV-VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 446 TR-----------LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL 494
R + + Q A + YL S + H+D+ + N+L+ D N K++D GL
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGL 174
Query: 495 SR-LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
R + + + + ++ PE + + SD++SYGVVL E+ +
Sbjct: 175 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 16/210 (7%)
Query: 352 RILGSGGFGEVYKGELQDGTV----VAVKSAKVGN-IKSTQQVLNEVGILSQVNHKNLVR 406
+ LG G GEV +L V VAVK + + + + E+ I +NH+N+V+
Sbjct: 12 QTLGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G E L EY + G L D + + R Q + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK-PGLSHVSTCAQGTLGYLDPEYYRNYQ 525
T HRD+K N+LLD+ N K++DFGL+ + + + GTL Y+ PE + +
Sbjct: 126 T---HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 526 L-TDKSDVYSYGVVLLELLTSQKAIDFSRD 554
+ DV+S G+VL +L + D D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVK----SAKVGNIKSTQQVLNEVGILSQVNHK 402
FS R +G G FG VY ++++ VVA+K S K N K Q ++ EV L ++ H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEK-WQDIIKEVRFLQKLRHP 114
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQT---AEALA 459
N ++ GC + L+ EY G+ D L + IA T + LA
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQ-----EVEIAAVTHGALQGLA 168
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
YLHS + HRDVK+ NILL + K+ DFG + + P V GT ++ PE
Sbjct: 169 YLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPE 220
Query: 520 Y---YRNYQLTDKSDVYSYGVVLLEL 542
Q K DV+S G+ +EL
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 352 RILGSGGFGEVY---KGELQD-GTVVAVKSAKVGNIKSTQQVLN--EVGILSQVNHKNLV 405
++LG G FG+V+ K D G + A+K K +K +V E IL+ VNH +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+L + LI +++ G L L K F + +A + A L +LHS
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFT-EEDVKFYLA-ELALGLDHLHSLG 150
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRN 523
I +RD+K NILLD++ + K+ DFGLS+ A + H GT+ Y+ PE
Sbjct: 151 ---IIYRDLKPENILLDEEGHIKLTDFGLSKEA---IDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 524 YQLTDKSDVYSYGVVLLELLTS 545
+ +D +SYGV++ E+LT
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTG 226
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQ----QVLNEVGILSQVNHKN 403
F +R LGSG FG+V+ E + + V K N +Q Q+ E+ +L ++H N
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERV--IKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHL-HGKYSSFNLTWSTRLRIALQTAEALAYLH 462
++++ + ++ E G L + + + L+ + Q ALAY H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNS---KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
S + H+D+K NIL D K+ DFGL+ L K ST A GT Y+ PE
Sbjct: 142 SQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS--DEHSTNAAGTALYMAPE 196
Query: 520 YYRNYQLTDKSDVYSYGVVLLELLT 544
++ +T K D++S GVV+ LLT
Sbjct: 197 VFKR-DVTFKCDIWSAGVVMYFLLT 220
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVK----SAKVGNIKSTQQVLNEVGILSQVNHK 402
FS R +G G FG VY ++++ VVA+K S K N K Q ++ EV L ++ H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEK-WQDIIKEVRFLQKLRHP 75
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQT---AEALA 459
N ++ GC + L+ EY G+ D L + IA T + LA
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQ-----EVEIAAVTHGALQGLA 129
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
YLHS + HRDVK+ NILL + K+ DFG + + P V GT ++ PE
Sbjct: 130 YLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPE 181
Query: 520 Y---YRNYQLTDKSDVYSYGVVLLEL 542
Q K DV+S G+ +EL
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 15/221 (6%)
Query: 334 RIFHLKELKK---ATNGFSKERILGSGGFGEVYKGELQ-DGTVVA---VKSAKVGNIKST 386
R K L++ N F + R+LG GGFGEV +++ G + A ++ ++ K
Sbjct: 169 RFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGE 228
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHL-HGKYSSFNLTWS 445
LNE IL +VN + +V L + L+ + G L H+ H + F
Sbjct: 229 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGF----- 283
Query: 446 TRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV 505
R AE L I +RD+K NILLDD + +++D GL+ G +
Sbjct: 284 PEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343
Query: 506 STCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
GT+GY+ PE +N + T D ++ G +L E++ Q
Sbjct: 344 GRV--GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + +G+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTIGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
KVADFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 KVADFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L C + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 155
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 156 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAG 235
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + +G+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTIGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
KVADFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 KVADFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 345 TNGFSKERILGSGGFGEVY----KGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVN 400
++ + +R+LG G FGEV K Q+ V + +V + +L EV +L Q++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 401 HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEAL 458
H N+++L + L+ E G L D + ++S + RI Q +
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGI 145
Query: 459 AYLHSAAYTPIYHRDVKSTNILLD---DDFNSKVADFGLSRLAKPGLSHVSTCAQ----- 510
Y+H I HRD+K N+LL+ D N ++ DFGLS +H +
Sbjct: 146 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKI 195
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTS 545
GT Y+ PE +K DV+S GV+L LL+
Sbjct: 196 GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 229
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 15/221 (6%)
Query: 334 RIFHLKELKK---ATNGFSKERILGSGGFGEVYKGELQ-DGTVVA---VKSAKVGNIKST 386
R K L++ N F + R+LG GGFGEV +++ G + A ++ ++ K
Sbjct: 169 RFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGE 228
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHL-HGKYSSFNLTWS 445
LNE IL +VN + +V L + L+ + G L H+ H + F
Sbjct: 229 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGF----- 283
Query: 446 TRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV 505
R AE L I +RD+K NILLDD + +++D GL+ G +
Sbjct: 284 PEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343
Query: 506 STCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
GT+GY+ PE +N + T D ++ G +L E++ Q
Sbjct: 344 GRV--GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 346 NGFSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQ---VLNEVGILSQVNH 401
N FS RI+G GGFGEVY D G + A+K IK Q LNE +LS V+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 402 KNLVRLLGCCVEAEQP---LLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAE 456
+ ++ P I + + G LH HL HG +S ++ + A +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIIL 303
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYL 516
L ++H+ + +RD+K NILLD+ + +++D GL+ H S GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 517 DPEYYRNYQLTDKS-DVYSYGVVLLELL 543
PE + D S D +S G +L +LL
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 346 NGFSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQ---VLNEVGILSQVNH 401
N FS RI+G GGFGEVY D G + A+K IK Q LNE +LS V+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 402 KNLVRLLGCCVEAEQP---LLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAE 456
+ ++ P I + + G LH HL HG +S ++ + A +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIIL 303
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYL 516
L ++H+ + +RD+K NILLD+ + +++D GL+ H S GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 517 DPEYYRNYQLTDKS-DVYSYGVVLLELL 543
PE + D S D +S G +L +LL
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 346 NGFSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQ---VLNEVGILSQVNH 401
N FS RI+G GGFGEVY D G + A+K IK Q LNE +LS V+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 402 KNLVRLLGCCVEAEQP---LLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAE 456
+ ++ P I + + G LH HL HG +S ++ + A +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIIL 303
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYL 516
L ++H+ + +RD+K NILLD+ + +++D GL+ H S GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 517 DPEYYRNYQLTDKS-DVYSYGVVLLELL 543
PE + D S D +S G +L +LL
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 346 NGFSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQ---VLNEVGILSQVNH 401
N FS RI+G GGFGEVY D G + A+K IK Q LNE +LS V+
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 402 KNLVRLLGCCVEAEQP---LLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAE 456
+ ++ P I + + G LH HL HG +S ++ + A +
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIIL 302
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYL 516
L ++H+ + +RD+K NILLD+ + +++D GL+ H S GT GY+
Sbjct: 303 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 356
Query: 517 DPEYYRNYQLTDKS-DVYSYGVVLLELL 543
PE + D S D +S G +L +LL
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 354 LGSGGFGEVYKGELQ-DGTVVAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLG 409
LG G FG+V G+ + G VAVK K+ ++ ++ E+ L H ++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 410 CCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
++ EY++ G L D++ +G+ L R+ Q + Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGR-----LDEKESRRLFQQILSGVDYCHRHM-- 136
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY--RNYQ 525
+ HRD+K N+LLD N+K+ADFGLS + G +C G+ Y PE R Y
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC--GSPNYAAPEVISGRLYA 193
Query: 526 LTDKSDVYSYGVVLLELLTSQKAID 550
+ D++S GV+L LL D
Sbjct: 194 -GPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 342 KKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILS 397
KK F +ILG G F V EL A+K + +I +V E ++S
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+++H V+L + E+ Y NG L ++ K SF+ T TR A + A
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSA 121
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYL 516
L YLH I HRD+K NILL++D + ++ DFG +++ P + GT Y+
Sbjct: 122 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 517 DPEYYRNYQLTDKSDVYSYGVVLLELLTS 545
PE SD+++ G ++ +L+
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 342 KKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILS 397
KK F +ILG G F V EL A+K + +I +V E ++S
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+++H V+L + E+ Y NG L ++ K SF+ T TR A + A
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSA 122
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYL 516
L YLH I HRD+K NILL++D + ++ DFG +++ P + GT Y+
Sbjct: 123 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 517 DPEYYRNYQLTDKSDVYSYGVVLLELL 543
PE SD+++ G ++ +L+
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLV 206
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 345 TNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNL 404
++ F E LG G VY+ + Q GT + + V E+G+L +++H N+
Sbjct: 52 SDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLH 462
++L + L+ E + G L D + G YS + + + Q EA+AYLH
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK-----QILEAVAYLH 165
Query: 463 SAAYTPIYHRDVKSTNILLDD---DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
I HRD+K N+L D K+ADFGLS++ + + + C GT GY PE
Sbjct: 166 ENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC--GTPGYCAPE 220
Query: 520 YYRNYQLTDKSDVYSYGVVLLELL 543
R + D++S G++ LL
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILL 244
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 5 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 54
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 55 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 114
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 115 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 166
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 167 QVTDFGFAKRVKG--RTWTLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 217
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 20 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 69
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 70 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 130 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 181
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 QVTDFGFAKRVKG--RTWTLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 345 TNGFSKERILGSGGFGEVY----KGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVN 400
++ + +R+LG G FGEV K Q+ V + +V + +L EV +L Q++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 401 HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEAL 458
H N+++L + L+ E G L D + ++S + RI Q +
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGI 139
Query: 459 AYLHSAAYTPIYHRDVKSTNILLDD---DFNSKVADFGLSRLAKPGLSHVSTCAQ----- 510
Y+H I HRD+K N+LL+ D N ++ DFGLS +H +
Sbjct: 140 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKI 189
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
GT Y+ PE +K DV+S GV+L LL+
Sbjct: 190 GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLS 222
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEV---YKGELQD--GTVVAVKSAKVGNIKSTQQV 389
IF + LK + LG G FG V L D G +VAVK + +
Sbjct: 6 IFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 58
Query: 390 LNEVGILSQVNHKNLVRLLGCCV-EAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
E+ IL ++ +V+ G Q L L+ EY+ +G L D L + L S
Sbjct: 59 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRL 116
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--V 505
L + Q + + YL S HRD+ + NIL++ + + K+ADFGL++L + V
Sbjct: 117 LLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 173
Query: 506 STCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
Q + + PE + + +SDV+S+GVVL EL T
Sbjct: 174 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 342 KKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILS 397
KK F +ILG G F V EL A+K + +I +V E ++S
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+++H V+L + E+ Y NG L ++ K SF+ T TR A + A
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSA 120
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYL 516
L YLH I HRD+K NILL++D + ++ DFG +++ P + GT Y+
Sbjct: 121 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 517 DPEYYRNYQLTDKSDVYSYGVVLLELLTS 545
PE SD+++ G ++ +L+
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEV---YKGELQD--GTVVAVKSAKVGNIKSTQQV 389
IF + LK + LG G FG V L D G +VAVK + +
Sbjct: 7 IFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 59
Query: 390 LNEVGILSQVNHKNLVRLLGCCV-EAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
E+ IL ++ +V+ G Q L L+ EY+ +G L D L + L S
Sbjct: 60 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRL 117
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--V 505
L + Q + + YL S HRD+ + NIL++ + + K+ADFGL++L + V
Sbjct: 118 LLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
Query: 506 STCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
Q + + PE + + +SDV+S+GVVL EL T
Sbjct: 175 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 354 LGSGGFGEVYKG---ELQD-----GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLV 405
LG G F +++KG E+ D T V +K + ++ ++S+++HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
G CV ++ +L+ E++ G+L +L + N+ W +L +A Q A A+ +L
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLEENT 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV---STCAQGTLGYLDPEYYR 522
+ H +V + NILL + + K + +L+ PG+S Q + ++ PE
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 523 NYQ-LTDKSDVYSYGVVLLEL----------LTSQKAIDFSRD 554
N + L +D +S+G L E+ L SQ+ + F D
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED 233
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 342 KKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILS 397
KK F +ILG G F V EL A+K + +I +V E ++S
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+++H V+L + E+ Y NG L ++ K SF+ T TR A + A
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSA 119
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYL 516
L YLH I HRD+K NILL++D + ++ DFG +++ P + GT Y+
Sbjct: 120 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 517 DPEYYRNYQLTDKSDVYSYGVVLLELL 543
PE SD+++ G ++ +L+
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLV 203
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEV---YKGELQD--GTVVAVKSAKVGNIKSTQQV 389
IF + LK + LG G FG V L D G +VAVK + +
Sbjct: 19 IFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 71
Query: 390 LNEVGILSQVNHKNLVRLLGCCV-EAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
E+ IL ++ +V+ G Q L L+ EY+ +G L D L + L S
Sbjct: 72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRL 129
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSH--V 505
L + Q + + YL S HRD+ + NIL++ + + K+ADFGL++L + V
Sbjct: 130 LLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 186
Query: 506 STCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
Q + + PE + + +SDV+S+GVVL EL T
Sbjct: 187 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY G +
Sbjct: 69 YAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+++D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
KV DFGL++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 KVTDFGLAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 345 TNGFSKERILGSGGFGEVY----KGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVN 400
++ + +R+LG G FGEV K Q+ V + +V + +L EV +L Q++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 401 HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
H N+++L + L+ E G L D + S + RI Q + Y
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---ISRKRFSEVDAARIIRQVLSGITY 164
Query: 461 LHSAAYTPIYHRDVKSTNILLDD---DFNSKVADFGLSRLAKPGLSHVSTCAQ-----GT 512
+H I HRD+K N+LL+ D N ++ DFGLS +H + GT
Sbjct: 165 MHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKIGT 214
Query: 513 LGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
Y+ PE +K DV+S GV+L LL+
Sbjct: 215 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLS 245
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN-EVGILSQVNHKNLV 405
F+K +G G FGEV+KG + + VVA+K + + + + E+ +LSQ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH-GKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
+ G ++ + +I EY+ G+ D L G + +T LR L+ L YLHS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI--ATILREILK---GLDYLHSE 123
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
HRD+K+ N+LL + K+ADFG++ +L + + GT ++ PE +
Sbjct: 124 KKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV--GTPFWMAPEVIKQ 178
Query: 524 YQLTDKSDVYSYGVVLLEL 542
K+D++S G+ +EL
Sbjct: 179 SAYDSKADIWSLGITAIEL 197
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 20 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 69
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 70 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 130 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 181
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLN---EVGILSQVNHKNLVRLLGC 410
LG G FG+VYK + ++ +A +AKV KS +++ + E+ IL+ +H +V+LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALA--AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
+ ++ E+ G + D + + LT + Q EAL +LHS I
Sbjct: 85 YYHDGKLWIMIEFCPGGAV-DAIMLELDR-GLTEPQIQVVCRQMLEALNFLHSKR---II 139
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD-- 528
HRD+K+ N+L+ + + ++ADFG+S L + GT ++ PE + D
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTP 198
Query: 529 ---KSDVYSYGVVLLEL 542
K+D++S G+ L+E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 345 TNGFSKERILGSGGFGEVY----KGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVN 400
++ + +R+LG G FGEV K Q+ V + +V + +L EV +L Q++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 401 HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
H N+++L + L+ E G L D + S + RI Q + Y
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---ISRKRFSEVDAARIIRQVLSGITY 165
Query: 461 LHSAAYTPIYHRDVKSTNILLDD---DFNSKVADFGLSRLAKPGLSHVSTCAQ-----GT 512
+H I HRD+K N+LL+ D N ++ DFGLS +H + GT
Sbjct: 166 MHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKIGT 215
Query: 513 LGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
Y+ PE +K DV+S GV+L LL+
Sbjct: 216 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLS 246
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLN---EVGILSQVNHKNLVRLLGC 410
LG G FG+VYK + ++ +A +AKV KS +++ + E+ IL+ +H +V+LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALA--AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
+ ++ E+ G + D + + LT + Q EAL +LHS I
Sbjct: 77 YYHDGKLWIMIEFCPGGAV-DAIMLELDR-GLTEPQIQVVCRQMLEALNFLHSKR---II 131
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD-- 528
HRD+K+ N+L+ + + ++ADFG+S L + GT ++ PE + D
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTP 190
Query: 529 ---KSDVYSYGVVLLEL 542
K+D++S G+ L+E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN-EVGILSQVNHKNLV 405
F+K +G G FGEV+KG + + VVA+K + + + + E+ +LSQ + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH-GKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
+ G ++ + +I EY+ G+ D L G + +T LR L+ L YLHS
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI--ATILREILK---GLDYLHSE 143
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
HRD+K+ N+LL + K+ADFG++ +L + + GT ++ PE +
Sbjct: 144 KKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV--GTPFWMAPEVIKQ 198
Query: 524 YQLTDKSDVYSYGVVLLEL 542
K+D++S G+ +EL
Sbjct: 199 SAYDSKADIWSLGITAIEL 217
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN-EVGILSQVNHKNLV 405
F+K +G G FGEV+KG + + VVA+K + + + + E+ +LSQ + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH-GKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
+ G ++ + +I EY+ G+ D L G + +T LR L+ L YLHS
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI--ATILREILK---GLDYLHSE 138
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
HRD+K+ N+LL + K+ADFG++ +L + GT ++ PE +
Sbjct: 139 KKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV--GTPFWMAPEVIKQ 193
Query: 524 YQLTDKSDVYSYGVVLLEL 542
K+D++S G+ +EL
Sbjct: 194 SAYDSKADIWSLGITAIEL 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 108/238 (45%), Gaps = 37/238 (15%)
Query: 345 TNGFSKERILGSGGFGEVY--KGELQDGTVVAVKSAKVGNIKSTQQ---VLNEVGILSQV 399
++ + + + LGSG +GEV K +L G A+K K ++ +T +L+EV +L Q+
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDH--LHGKYSSFNLTWSTRLRIALQTAEA 457
+H N+++L + L+ E G L D L K+S + I Q
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA-----VIMKQVLSG 133
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDD---DFNSKVADFGLSRLAKPGLSHVSTCAQGTLG 514
YLH I HRD+K N+LL+ D K+ DFGLS + G GT
Sbjct: 134 TTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAY 188
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELL---------TSQKAI------DFSRDPDD 557
Y+ PE R + +K DV+S GV+L LL T Q+ + FS DP D
Sbjct: 189 YIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPD 245
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLN-----EV 393
++K + K LG G F VYK ++ +VA+K K+G+ + +N E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 394 GILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQ 453
+L +++H N++ LL L+++++ + K +S LT S L
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDL---EVIIKDNSLVLTPSHIKAYMLM 120
Query: 454 TAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGT 512
T + L YLH I HRD+K N+LLD++ K+ADFGL++ P ++ T
Sbjct: 121 TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--T 175
Query: 513 LGYLDPEYYRNYQLTDKS-DVYSYGVVLLELL 543
Y PE ++ D+++ G +L ELL
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 315 LAKEREDMLK-----SSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD 369
LAK +ED LK S N A + F + + LG+G FG V + ++
Sbjct: 40 LAKAKEDFLKKWETPSQNTA--------------QLDQFDRIKTLGTGSFGRVMLVKHKE 85
Query: 370 -GTVVAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIA 425
G A+K KV +K + LNE IL VN LV+L + ++ EY+A
Sbjct: 86 SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 145
Query: 426 NGTLHDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDD 483
G + HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 146 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 197
Query: 484 DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + + C GT YL PE + D ++ GV++ E+
Sbjct: 198 QGYIQVTDFGFAKRVKG--ATWTLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 6 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 56
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 57 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 116
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++S + + A Q YLHS + +RD+K N+L+D+ +
Sbjct: 117 SHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQ 168
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 169 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 218
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 104/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+++D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
KV DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 KVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 354 LGSGGFGEV-----YKGELQDGTVVAVKSAKVGNIKSTQ---QVLNEVGILSQVNHKNLV 405
LG G FG+V YK + + VA+K +K + +V E+ L + H +++
Sbjct: 17 LGEGSFGKVKLATHYKTQQK----VALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+L +++ EY A G L D++ K +T R Q A+ Y H
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K N+LLDD+ N K+ADFGLS + G ++C G+ Y PE
Sbjct: 129 ---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVINGKL 183
Query: 526 LTD-KSDVYSYGVVLLELLTSQKAIDFSRDPD---DVNLAIYV 564
+ DV+S G+VL +L + D P+ VN +YV
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYV 226
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN-EVGILSQVNHKNLV 405
F+K +G G FGEV+KG + + VVA+K + + + + E+ +LSQ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLH-GKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
+ G ++ + +I EY+ G+ D L G + +T LR L+ L YLHS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI--ATILREILK---GLDYLHSE 123
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
HRD+K+ N+LL + K+ADFG++ +L + GT ++ PE +
Sbjct: 124 KKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV--GTPFWMAPEVIKQ 178
Query: 524 YQLTDKSDVYSYGVVLLEL 542
K+D++S G+ +EL
Sbjct: 179 SAYDSKADIWSLGITAIEL 197
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 148
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCA-QGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P A GT Y+ PE
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAG 228
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV--NHKNLVRLLGCC 411
+G G +GEV++G L G VAVK + + + Q E I + V H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVK---IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 412 VEAE----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY- 466
+ + Q LI Y +G+L+D L + +L LR+A+ A LA+LH +
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIFG 127
Query: 467 ----TPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYLDPE 519
I HRD KS N+L+ + +AD GL+ + G ++ GT Y+ PE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 520 YYRNYQLTD------KSDVYSYGVVLLEL 542
TD +D++++G+VL E+
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY G +
Sbjct: 69 YAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+++D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFGL++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 QVTDFGLAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 150
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
+ SD+++ G ++ +L+
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAG 230
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 105/239 (43%), Gaps = 37/239 (15%)
Query: 315 LAKEREDMLK-----SSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD 369
LAK +ED LK S N A + F + + LG+G FG V + ++
Sbjct: 19 LAKAKEDFLKKWETPSQNTA--------------QLDQFDRIKTLGTGSFGRVMLVKHKE 64
Query: 370 -GTVVAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIA 425
G A+K KV +K + LNE IL VN LV+L + ++ EY+A
Sbjct: 65 SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 426 NGTLHDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDD 483
G + HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 484 DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K ++ GT YL PE + D ++ GV++ E+
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLA----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 37/239 (15%)
Query: 315 LAKEREDMLK-----SSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD 369
LAK +ED LK S N A + F + + LG+G FG V + ++
Sbjct: 19 LAKAKEDFLKKWETPSQNTA--------------QLDQFDRIKTLGTGSFGRVMLVKHKE 64
Query: 370 -GTVVAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIA 425
G A+K KV +K + LNE IL VN LV+L + ++ EY+A
Sbjct: 65 SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 426 NGTLHDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDD 483
G + HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 484 DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + GT YL PE + D ++ GV++ E+
Sbjct: 177 QGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTV 372
LAK +ED LK N A A HL + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHKETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 69 FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 354 LGSGGFGEVYKG---ELQD-----GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLV 405
LG G F +++KG E+ D T V +K + ++ ++S+++HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
G C ++ +L+ E++ G+L +L + N+ W +L +A Q A A+ +L
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLEENT 133
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV---STCAQGTLGYLDPEYYR 522
+ H +V + NILL + + K + +L+ PG+S Q + ++ PE
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 523 NYQ-LTDKSDVYSYGVVLLEL----------LTSQKAIDFSRD 554
N + L +D +S+G L E+ L SQ+ + F D
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED 233
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV--NHKNLVRLLGCC 411
+G G FGEV++G+ + G VAVK + + + + E I V H+N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 412 VEAE----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH----- 462
+ Q L+ +Y +G+L D+L + + +T +++AL TA LA+LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYLDPE 519
+ I HRD+KS NIL+ + +AD GL+ + GT Y+ PE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 520 Y------YRNYQLTDKSDVYSYGVVLLEL 542
++++ ++D+Y+ G+V E+
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 43/255 (16%)
Query: 337 HLKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQV 389
H+KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 22 HMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 81
Query: 390 LNEVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGK 436
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 82 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL--- 138
Query: 437 YSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLS 495
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG
Sbjct: 139 --ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG 185
Query: 496 RLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRD 554
L K V T GT Y PE+ R ++ +S V+S G++L +++ I F D
Sbjct: 186 ALLK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 240
Query: 555 PDDVNLAIYVSQRAS 569
+ + ++ QR S
Sbjct: 241 EEIIRGQVFFRQRVS 255
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTV 372
LAK +ED LK N A A HL + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHKETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 69 FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTV 372
LAK +ED LK N A A HL + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHKETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 69 FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV--NHKNLVRLLGCC 411
+G G FGEV++G+ + G VAVK + + + + E I V H+N++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 412 VEAE----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH----- 462
+ Q L+ +Y +G+L D+L + + +T +++AL TA LA+LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYLDPE 519
+ I HRD+KS NIL+ + +AD GL+ + GT Y+ PE
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 520 Y------YRNYQLTDKSDVYSYGVVLLEL 542
++++ ++D+Y+ G+V E+
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 20 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 69
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 70 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++ + + A Q YLHS + +RD+K N+L+D
Sbjct: 130 FSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 181
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV--NHKNLVRLLGCC 411
+G G FGEV++G+ + G VAVK + + + + E I V H+N++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 412 VEAE----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH----- 462
+ Q L+ +Y +G+L D+L + + +T +++AL TA LA+LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYLDPE 519
+ I HRD+KS NIL+ + +AD GL+ + GT Y+ PE
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 520 Y------YRNYQLTDKSDVYSYGVVLLEL 542
++++ ++D+Y+ G+V E+
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++S + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV--NHKNLVRLLGCC 411
+G G FGEV++G+ + G VAVK + + + + E I V H+N++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 412 VEAE----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH----- 462
+ Q L+ +Y +G+L D+L + + +T +++AL TA LA+LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYLDPE 519
+ I HRD+KS NIL+ + +AD GL+ + GT Y+ PE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 520 Y------YRNYQLTDKSDVYSYGVVLLEL 542
++++ ++D+Y+ G+V E+
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++ + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++ + + A Q YLHS + +RD+K N+L+D
Sbjct: 129 FSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 20 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 70
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 130
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++S + + A Q YLHS + +RD+K N+L+D +
Sbjct: 131 SHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 182
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 183 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 345 TNGFSKERILGSGGFGEVY--KGELQDGTVVAVKSAKVGNIKSTQQ---VLNEVGILSQV 399
++ + + + LGSG +GEV K +L G A+K K ++ +T +L+EV +L Q+
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDH--LHGKYSSFNLTWSTRLRIALQTAEA 457
+H N+++L + L+ E G L D L K+S + I Q
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA-----VIMKQVLSG 116
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDD---DFNSKVADFGLSRLAKPGLSHVSTCAQGTLG 514
YLH I HRD+K N+LL+ D K+ DFGLS + G GT
Sbjct: 117 TTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAY 171
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
Y+ PE R + +K DV+S GV+L LL
Sbjct: 172 YIAPEVLRK-KYDEKCDVWSCGVILYILL 199
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 151
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 152 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAG 231
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++S + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++S + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKSSNIAGKPAR-IFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTV 372
LAK +ED LK PA+ HL + F + R LG+G FG V + ++ G
Sbjct: 20 LAKAKEDFLKKWE---SPAQNTAHLDQ-------FERIRTLGTGSFGRVMLVKHKETGNH 69
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE I VN LV+L + ++ EY G +
Sbjct: 70 YAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM 129
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 130 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 181
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
KVADFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 KVADFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++S + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++S + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV--NHKNLVRLLGCC 411
+G G FGEV++G+ + G VAVK + + + + E I V H+N++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 412 VEAE----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH----- 462
+ Q L+ +Y +G+L D+L + + +T +++AL TA LA+LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYLDPE 519
+ I HRD+KS NIL+ + +AD GL+ + GT Y+ PE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 520 Y------YRNYQLTDKSDVYSYGVVLLEL 542
++++ ++D+Y+ G+V E+
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 350 KERILGSGGFGEVYKGELQD-GTVVAVKSAKVG-NIKSTQQVLNEVGILSQVNHKNLVRL 407
KER LG+GGFG V + QD G VA+K + + K+ ++ E+ I+ ++NH N+V
Sbjct: 19 KER-LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 408 ------LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
L + PLL EY G L +L+ + L + + AL YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 462 HSAAYTPIYHRDVKSTNILLD---DDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDP 518
H I HRD+K NI+L K+ D G ++ G + T GTL YL P
Sbjct: 138 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--ELCTEFVGTLQYLAP 192
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLTS 545
E + T D +S+G + E +T
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+++D
Sbjct: 129 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 150
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAG 230
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 69
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 70 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 179
Query: 519 EYYRNYQLTDKS-DVYSYGVVLLELLTSQ 546
E + + D++S G + E++T +
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKSSNIAGKPAR-IFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTV 372
LAK +ED LK PA+ HL + F + + LG+G FG V + ++ G
Sbjct: 12 LAKAKEDFLKKWE---SPAQNTAHLDQ-------FERIKTLGTGSFGRVMLVKHKETGNH 61
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 62 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 121
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 122 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 173
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 174 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 150
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 350 KERILGSGGFGEVYKGELQD-GTVVAVKSAKVG-NIKSTQQVLNEVGILSQVNHKNLVRL 407
KER LG+GGFG V + QD G VA+K + + K+ ++ E+ I+ ++NH N+V
Sbjct: 20 KER-LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 408 ------LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
L + PLL EY G L +L+ + L + + AL YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 462 HSAAYTPIYHRDVKSTNILLD---DDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDP 518
H I HRD+K NI+L K+ D G ++ G + T GTL YL P
Sbjct: 139 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--ELCTEFVGTLQYLAP 193
Query: 519 EYYRNYQLTDKSDVYSYGVVLLELLTS 545
E + T D +S+G + E +T
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 132
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 133 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAG 212
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 150
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 151
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 152 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAG 231
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 353 ILGSGGFGEVYKGELQD-GTVVAVKS-AKVGNIKSTQQV-LNEVGILSQVNHKNLVRLLG 409
++G G +G V K +D G +VA+K + + K +++ + E+ +L Q+ H+NLV LL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 410 CCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPI 469
C + ++ L++E++ + L D + L + + Q + + HS I
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDL---ELFPNGLDYQVVQKYLFQIINGIGFCHSHN---I 145
Query: 470 YHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDPEYY-RNYQLT 527
HRD+K NIL+ K+ DFG +R LA PG + A T Y PE + +
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA--TRWYRAPELLVGDVKYG 203
Query: 528 DKSDVYSYGVVLLELLTSQKAIDFSRDPD 556
DV++ G ++ E+ + D D
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDID 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 148
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAG 228
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV--NHKNLVRLLGCC 411
+G G FGEV++G+ + G VAVK + + + + E I V H+N++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 412 VEAE----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH----- 462
+ Q L+ +Y +G+L D+L + + +T +++AL TA LA+LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYLDPE 519
+ I HRD+KS NIL+ + +AD GL+ + GT Y+ PE
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 520 Y------YRNYQLTDKSDVYSYGVVLLEL 542
++++ ++D+Y+ G+V E+
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 148
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAG 228
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 62
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 172
Query: 519 EYYRNYQLTDKS-DVYSYGVVLLELLTSQ 546
E + + D++S G + E++T +
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 30/214 (14%)
Query: 345 TNGFSKERILGSGGFGEVY----KGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVN 400
++ + +R+LG G FGEV K Q+ V + +V + +L EV +L Q++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 401 HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEAL 458
H N+ +L + L+ E G L D + ++S + RI Q +
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGI 139
Query: 459 AYLHSAAYTPIYHRDVKSTNILLDD---DFNSKVADFGLSRLAKPGLSHVSTCAQ----- 510
Y H I HRD+K N+LL+ D N ++ DFGLS +H +
Sbjct: 140 TYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKXKDKI 189
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
GT Y+ PE +K DV+S GV+L LL+
Sbjct: 190 GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLS 222
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 147
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 523 NYQLTDKSDVYSYGVVLLELL 543
SD+++ G ++ +L+
Sbjct: 205 EKSACKSSDLWALGCIIYQLV 225
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 103/235 (43%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 20 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 69
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN L +L + ++ EY G +
Sbjct: 70 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM 129
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+++D
Sbjct: 130 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYI 181
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
KV DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 KVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 150
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKSSNIAGKPAR-IFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTV 372
LAK +ED LK PA+ HL + F + + LG+G FG V + ++ G
Sbjct: 20 LAKAKEDFLKKWE---SPAQNTAHLDQ-------FERIKTLGTGSFGRVMLVKHKETGNH 69
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 70 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 130 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 181
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKSSNIAGKPAR-IFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTV 372
LAK +ED LK PA+ HL + F + + LG+G FG V + ++ G
Sbjct: 20 LAKAKEDFLKKWE---SPAQNTAHLDQ-------FERIKTLGTGSFGRVMLVKHKETGNH 69
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 70 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 130 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 181
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 66
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 122 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 176
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 177 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 205
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 153
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 154 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAG 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 150
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 103/235 (43%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 20 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 69
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN L +L + ++ EY G +
Sbjct: 70 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM 129
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+++D
Sbjct: 130 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYI 181
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
KV DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 KVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKSSNIAGKPAR-IFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTV 372
LAK +ED LK PA+ HL + F + + LG+G FG V + ++ G
Sbjct: 20 LAKAKEDFLKKWE---SPAQNTAHLDQ-------FERIKTLGTGSFGRVMLVKHKETGNH 69
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 70 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 130 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 181
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 59
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 115 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 169
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 170 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 202
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKSSNIAGKPAR-IFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTV 372
LAK +ED LK PA+ HL + F + + LG+G FG V + ++ G
Sbjct: 40 LAKAKEDFLKKWE---SPAQNTAHLDQ-------FERIKTLGTGSFGRVMLVKHKETGNH 89
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 90 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 149
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+L+D
Sbjct: 150 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 201
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 202 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 348 FSKERILGSGGFGE-VYKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 148
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 523 NYQLTDKSDVYSYGVVLLELL 543
SD+++ G ++ +L+
Sbjct: 206 EKSACKSSDLWALGCIIYQLV 226
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 103/235 (43%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 19 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 68
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY G +
Sbjct: 69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++ + + A Q YLHS + +RD+K N+++D
Sbjct: 129 FSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYI 180
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
KV DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 181 KVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 62
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 172
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 173 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 61
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 171
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 172 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKN 403
F +ILG G F V EL A+K + +I +V E ++S+++H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHS 463
V+L + E+ Y NG L ++ K SF+ T TR A + AL YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG 147
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV-STCAQGTLGYLDPEYYR 522
I HRD+K NILL++D + ++ DFG +++ P + GT Y+ PE
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
SD+++ G ++ +L+
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAG 227
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 61
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 172 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 60
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 170
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 171 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 58
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 169 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 69
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 70 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 179
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 180 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 61
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 171
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 172 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 58
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 169 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 60
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 170
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 171 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 61
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 171
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 172 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 58
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 169 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 61
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 172 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 387 QQVLNEVGILSQVN-HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWS 445
+ L EV IL +V+ H N+++L L+++ + G L D+L K + L+
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEK 124
Query: 446 TRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV 505
+I E + LH I HRD+K NILLDDD N K+ DFG S PG
Sbjct: 125 ETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 181
Query: 506 STCAQGTLGYLDPEYYR-----NYQLTDKS-DVYSYGVVLLELL 543
S C GT YL PE N+ K D++S GV++ LL
Sbjct: 182 SVC--GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 60
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 116 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 170
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 171 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 61
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 171
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 172 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 121/299 (40%), Gaps = 51/299 (17%)
Query: 352 RILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVN-HKNLVRLLG 409
R+L GGF VY+ + + G A+K + + ++ EV + +++ H N+V+
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 410 CCV-------EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH 462
+ L+ + G L + L S L+ T L+I QT A+ ++H
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL-----------AKPGLSHVSTCAQG 511
PI HRD+K N+LL + K+ DFG + + L
Sbjct: 154 RQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212
Query: 512 TLGYLDPE---YYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRA 568
T Y PE Y N+ + +K D+++ G +L L Q +
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE------------------ 254
Query: 569 SNGAIMEVVDPR--LQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
+GA + +V+ + + H+ + F L A L+ ER S+ +VVH+LQ I
Sbjct: 255 -DGAKLRIVNGKYSIPPHDTQYTV------FHSLIRAMLQVNPEERLSIAEVVHQLQEI 306
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 325 SSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEV----YKGELQDGTVVAVKSAKV 380
SSN KP+ LK ++G G FG+V +K E V ++ +
Sbjct: 30 SSNPHAKPSDFHFLK-------------VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAI 76
Query: 381 GNIKSTQQVLNEVGIL-SQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSS 439
K + +++E +L V H LV L A++ + +YI G L HL +
Sbjct: 77 LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--- 133
Query: 440 FNLTWSTRLRI-ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA 498
R R A + A AL YLHS I +RD+K NILLD + + DFG L
Sbjct: 134 -RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFG---LC 186
Query: 499 KPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
K + H ST + GT YL PE D + G VL E+L
Sbjct: 187 KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 62
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 172
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 173 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 61
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIKSYLFQLL 116
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 172 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 62
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 118 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 172
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 173 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 205
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 58
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 114 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 169 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 59
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 115 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 170 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 202
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 328 IAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQDG----TVVAVKSAKVG-- 381
IA P KE K + F K R LGSG +GEV + ++G + +K ++
Sbjct: 19 IAINPGMYVRKKEGKIGESYF-KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKG 77
Query: 382 -------NI-KSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHL 433
NI K +++ NE+ +L ++H N+++L + + L+ E+ G L + +
Sbjct: 78 RYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI 137
Query: 434 HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDD---FNSKVA 490
++ I Q + YLH I HRD+K NILL++ N K+
Sbjct: 138 INRHK---FDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIV 191
Query: 491 DFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
DFGLS GT Y+ PE + + +K DV+S GV++ LL
Sbjct: 192 DFGLSSFFSKDYKLRDRL--GTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILL 241
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 59
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 115 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 170 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 202
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G+++ + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFAEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 58
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTA 455
+NH N+V+LL + L++E+ LH L + LT I Q
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 169 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 63
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 174 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 202
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++S + + A Q YLHS + +RD+K N+++D +
Sbjct: 130 SHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIIISKGYNKAVDWWALGVLIYEM 231
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++S + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ ++
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYQM 231
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 16/227 (7%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVV----AVKSAKVGNIKSTQQVLNEVGILSQV-NHK 402
F R++G G + +V L+ + VK V + + V E + Q NH
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH 462
LV L C + + EY+ G L H+ + L + + + AL YLH
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLH 170
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA-KPGLSHVSTCAQGTLGYLDPEYY 521
I +RD+K N+LLD + + K+ D+G+ + +PG + + C GT Y+ PE
Sbjct: 171 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC--GTPNYIAPEIL 225
Query: 522 RNYQLTDKSDVYSYGVVLLELLTSQKAIDF--SRDPDDVNLAIYVSQ 566
R D ++ GV++ E++ + D S D D N Y+ Q
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 272
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKSSNIAGKPAR-IFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTV 372
LAK +ED LK PA+ HL + F + + LG+G FG V + ++ G
Sbjct: 20 LAKAKEDFLKKWE---SPAQNTAHLDQ-------FERIKTLGTGSFGRVMLVKHKETGNH 69
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY G +
Sbjct: 70 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 129
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++S + + A Q YLHS + +RD+K N+++D
Sbjct: 130 FSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYI 181
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
KV DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 KVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++ + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFXEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 354 LGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+G G G V E G VAVK + + + + NEV I+ +H N+V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 413 EAEQPLLIYEYIANGTLHDHL-HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
++ ++ E++ G L D + H + + + + L AL+YLH+ + H
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQG---VIH 164
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSD 531
RD+KS +ILL D K++DFG + GT ++ PE + D
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEVD 223
Query: 532 VYSYGVVLLELLTSQ 546
++S G++++E++ +
Sbjct: 224 IWSLGIMVIEMIDGE 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 14 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 64
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 65 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 124
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++ + + A Q YLHS + +RD+K N+L+D +
Sbjct: 125 SHLRRIGRFXEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 176
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 177 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 226
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 40/218 (18%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 61
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSF-NLTWSTRLRIAL------QTA 455
N+V+LL + L++E H+H +F + + T + + L Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFE---------HVHQDLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLG 514
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 167
Query: 515 YLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 168 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++ + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFXEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++ + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFXEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 37/239 (15%)
Query: 315 LAKEREDMLK-----SSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD 369
LAK +ED LK S N A + F + + LG+G FG V + ++
Sbjct: 40 LAKAKEDFLKKWETPSQNTA--------------QLDQFDRIKTLGTGSFGRVMLVKHKE 85
Query: 370 -GTVVAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIA 425
G A+K KV +K + LNE IL VN LV+L + ++ EY+A
Sbjct: 86 SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 145
Query: 426 NGTLHDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDD 483
G + HL G++ + + A Q YLHS + +RD+K N+L+D
Sbjct: 146 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 197
Query: 484 DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 198 QGYIQVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 16/227 (7%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVV----AVKSAKVGNIKSTQQVLNEVGILSQV-NHK 402
F R++G G + +V L+ + VK V + + V E + Q NH
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH 462
LV L C + + EY+ G L H+ + L + + + AL YLH
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLH 138
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA-KPGLSHVSTCAQGTLGYLDPEYY 521
I +RD+K N+LLD + + K+ D+G+ + +PG + C GT Y+ PE
Sbjct: 139 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEIL 193
Query: 522 RNYQLTDKSDVYSYGVVLLELLTSQKAIDF--SRDPDDVNLAIYVSQ 566
R D ++ GV++ E++ + D S D D N Y+ Q
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 240
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+K ++ + ST + E+ +L ++NH
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKELNHP 62
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + L+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 172
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 173 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKSSNIAGKPAR-IFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTV 372
LAK +ED LK PA+ HL + F + + LG+G FG V + ++ G
Sbjct: 12 LAKAKEDFLKKWE---SPAQNTAHLDQ-------FERIKTLGTGSFGRVMLVKHKETGNH 61
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN LV+L + ++ EY+ G +
Sbjct: 62 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 121
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++ + + A Q YLHS + +RD+K N+L+D
Sbjct: 122 FSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYI 173
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
+V DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 174 QVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 334 RIFHLKELKKATNG---FSKERILGSGGFGEVYKGELQ-DGTVVA---VKSAKVGNIKST 386
R K L+ G F R+LG GGFGEV+ +++ G + A + ++ K
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST 446
Q + E IL++V H + L E + L + I NG +Y +N+
Sbjct: 230 QGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGG-----DIRYHIYNVDEDN 283
Query: 447 ----RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL 502
R TA+ ++ L I +RD+K N+LLDDD N +++D GL+ K G
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
+ A GT G++ PE + D ++ GV L E++ ++
Sbjct: 344 TKTKGYA-GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 348 FSKERILGSGGFGEVYKGE----LQDGTVVAVKSAK----VGNIKSTQQVLNEVGILSQV 399
F R+LG GG+G+V++ G + A+K K V N K T E IL +V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALA 459
H +V L+ + LI EY++ G L L + T L + + AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYL---AEISMALG 135
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYL 516
+LH I +RD+K NI+L+ + K+ DFGL + + H T GT+ Y+
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKES----IHDGTVTHXFCGTIEYM 188
Query: 517 DPEYYRNYQLTDKSDVYSYGVVLLELLTS 545
PE D +S G ++ ++LT
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 354 LGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+G G G V ++ G +VAVK + + + + NEV I+ H+N+V + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 413 EAEQPLLIYEYIANGTLHDHL-HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
++ ++ E++ G L D + H + + + + L +AL+ LH+ + H
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-----VCLAVLQALSVLHAQG---VIH 270
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSD 531
RD+KS +ILL D K++DFG + GT ++ PE + D
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVD 329
Query: 532 VYSYGVVLLELLTSQ 546
++S G++++E++ +
Sbjct: 330 IWSLGIMVIEMVDGE 344
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 348 FSKERILGSGGFGEVYKGE----LQDGTVVAVKSAK----VGNIKSTQQVLNEVGILSQV 399
F R+LG GG+G+V++ G + A+K K V N K T E IL +V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALA 459
H +V L+ + LI EY++ G L L + T L + + AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYL---AEISMALG 135
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYL 516
+LH I +RD+K NI+L+ + K+ DFGL + + H T GT+ Y+
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKES----IHDGTVTHTFCGTIEYM 188
Query: 517 DPEYYRNYQLTDKSDVYSYGVVLLELLTS 545
PE D +S G ++ ++LT
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV--LNEVGILSQVN 400
AT+ + +G G +G VYK + G VA+KS +V N + + + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 401 ---HKNLVRLLGCCVEAE-----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIAL 452
H N+VRL+ C + + L++E++ + L +L K L T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLD-KAPPPGLPAETIKDLMR 119
Query: 453 QTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT 512
Q L +LH+ I HRD+K NIL+ K+ADFGL+R+ ++ T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--T 174
Query: 513 LGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
L Y PE D++S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVL-----NEVGILS 397
AT+ + +G G +G VYK + G VA+KS +V N L EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 398 QVN---HKNLVRLLGCCVEAE-----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLR 449
++ H N+VRL+ C + + L++E++ + L +L K L T
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLD-KAPPPGLPAETIKD 124
Query: 450 IALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCA 509
+ Q L +LH+ I HRD+K NIL+ K+ADFGL+R+ ++
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV 181
Query: 510 QGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
TL Y PE D++S G + E+
Sbjct: 182 --TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV--LNEVGILSQVN 400
AT+ + +G G +G VYK + G VA+KS +V N + + + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 401 ---HKNLVRLLGCCVEAE-----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIAL 452
H N+VRL+ C + + L++E++ + L +L K L T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLD-KAPPPGLPAETIKDLMR 119
Query: 453 QTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT 512
Q L +LH+ I HRD+K NIL+ K+ADFGL+R+ ++ T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--T 174
Query: 513 LGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
L Y PE D++S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K G + E+ I+ +++H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVR 77
Query: 407 LLGCCVEAEQPL------LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L + + L+ +Y+ H + L Q +LAY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+HS I HRD+K N+LLD D K+ DFG ++ G +VS Y+
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSR 186
Query: 520 YYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 334 RIFHLKELKKATNG---FSKERILGSGGFGEVYKGELQ-DGTVVA---VKSAKVGNIKST 386
R K L+ G F R+LG GGFGEV+ +++ G + A + ++ K
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST 446
Q + E IL++V H + L E + L + I NG +Y +N+
Sbjct: 230 QGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGG-----DIRYHIYNVDEDN 283
Query: 447 ----RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL 502
R TA+ ++ L I +RD+K N+LLDDD N +++D GL+ K G
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
+ A GT G++ PE + D ++ GV L E++ ++
Sbjct: 344 TKTKGYA-GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 387 QQVLNEVGILSQVN-HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWS 445
+ L EV IL +V+ H N+++L L+++ + G L D+L K + L+
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEK 111
Query: 446 TRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV 505
+I E + LH I HRD+K NILLDDD N K+ DFG S PG
Sbjct: 112 ETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 168
Query: 506 STCAQGTLGYLDPEYYR-----NYQLTDKS-DVYSYGVVLLELL 543
C GT YL PE N+ K D++S GV++ LL
Sbjct: 169 EVC--GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 210
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 334 RIFHLKELKKATNG---FSKERILGSGGFGEVYKGELQ-DGTVVA---VKSAKVGNIKST 386
R K L+ G F R+LG GGFGEV+ +++ G + A + ++ K
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST 446
Q + E IL++V H + L E + L + I NG +Y +N+
Sbjct: 230 QGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGG-----DIRYHIYNVDEDN 283
Query: 447 ----RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL 502
R TA+ ++ L I +RD+K N+LLDDD N +++D GL+ K G
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
+ A GT G++ PE + D ++ GV L E++ ++
Sbjct: 344 TKTKGYA-GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 354 LGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+G G G V ++ G +VAVK + + + + NEV I+ H+N+V + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 413 EAEQPLLIYEYIANGTLHDHL-HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
++ ++ E++ G L D + H + + + + L +AL+ LH+ + H
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIH 148
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSD 531
RD+KS +ILL D K++DFG + GT ++ PE + D
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVD 207
Query: 532 VYSYGVVLLELLTSQ 546
++S G++++E++ +
Sbjct: 208 IWSLGIMVIEMVDGE 222
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 8/204 (3%)
Query: 348 FSKERILGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLV 405
+++ + +G G +G V ++ V K + + Q+ L E+ IL + H+N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+ + + YI + L+ S L+ Q L Y+HSA
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN 164
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRN 523
+ HRD+K +N+L++ + K+ DFGL+R+A P H + T Y PE N
Sbjct: 165 ---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ KS D++S G +L E+L+++
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 334 RIFHLKELKKATNG---FSKERILGSGGFGEVYKGELQ-DGTVVA---VKSAKVGNIKST 386
R K L+ G F R+LG GGFGEV+ +++ G + A + ++ K
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST 446
Q + E IL++V H + L E + L + I NG +Y +N+
Sbjct: 230 QGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGG-----DIRYHIYNVDEDN 283
Query: 447 ----RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL 502
R TA+ ++ L I +RD+K N+LLDDD N +++D GL+ K G
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
+ A GT G++ PE + D ++ GV L E++ ++
Sbjct: 344 TKTKGYA-GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 16/227 (7%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVV----AVKSAKVGNIKSTQQVLNEVGILSQV-NHK 402
F R++G G + +V L+ + VK V + + V E + Q NH
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH 462
LV L C + + EY+ G L H+ + L + + + AL YLH
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLH 127
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA-KPGLSHVSTCAQGTLGYLDPEYY 521
I +RD+K N+LLD + + K+ D+G+ + +PG + C GT Y+ PE
Sbjct: 128 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEIL 182
Query: 522 RNYQLTDKSDVYSYGVVLLELLTSQKAIDF--SRDPDDVNLAIYVSQ 566
R D ++ GV++ E++ + D S D D N Y+ Q
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 229
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 102/235 (43%), Gaps = 29/235 (12%)
Query: 315 LAKEREDMLKS-SNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY-KGELQDGTV 372
LAK +ED LK N A A HL + F + + LG+G FG V ++ G
Sbjct: 20 LAKAKEDFLKKWENPAQNTA---HLDQ-------FERIKTLGTGSFGRVMLVKHMETGNH 69
Query: 373 VAVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
A+K KV +K + LNE IL VN L +L + ++ EY G +
Sbjct: 70 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM 129
Query: 430 HDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS 487
HL G++ + + A Q YLHS + +RD+K N+++D
Sbjct: 130 FSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYI 181
Query: 488 KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
KV DFG ++ K + C GT YL PE + D ++ GV++ E+
Sbjct: 182 KVTDFGFAKRVKGRTWXL--C--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K G + E+ I+ +++H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVR 77
Query: 407 LLGCCVEAEQPL------LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L + + L+ +Y+ H + L Q +LAY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+HS I HRD+K N+LLD D K+ DFG ++ G +VS Y+
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSR 186
Query: 520 YYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 16/227 (7%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVV----AVKSAKVGNIKSTQQVLNEVGILSQV-NHK 402
F R++G G + +V L+ + VK V + + V E + Q NH
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH 462
LV L C + + EY+ G L H+ + L + + + AL YLH
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLH 123
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA-KPGLSHVSTCAQGTLGYLDPEYY 521
I +RD+K N+LLD + + K+ D+G+ + +PG + C GT Y+ PE
Sbjct: 124 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEIL 178
Query: 522 RNYQLTDKSDVYSYGVVLLELLTSQKAIDF--SRDPDDVNLAIYVSQ 566
R D ++ GV++ E++ + D S D D N Y+ Q
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 225
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 38/277 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKST----QQVLNEVGILSQVNHKNLVRLLG 409
+G G F VYKG L T V V ++ + K T Q+ E L + H N+VR
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 410 C---CVEAEQ-PLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLR-IALQTAEALAYLHSA 464
V+ ++ +L+ E +GTL +L F + LR Q + L +LH+
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 465 AYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
PI HRD+K NI + S K+ D GL+ L + + GT + PE Y
Sbjct: 149 T-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI---GTPEFXAPEXYEE 204
Query: 524 YQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQG 583
+ + DVY++G LE TS+ + A + +R ++G V P
Sbjct: 205 -KYDESVDVYAFGXCXLEXATSEYPY------SECQNAAQIYRRVTSG-----VKP---- 248
Query: 584 HEASVNILMSLKLFSELAVACLREKKSERPSMTDVVH 620
AS + +++ E+ C+R+ K ER S+ D+++
Sbjct: 249 --ASFD-KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKST-QQVLNEVGILSQVNH 401
+++ F + LG+G + VYKG G VA+K K+ + + T + E+ ++ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY---SSFNLTWSTRLRIALQTAEAL 458
+N+VRL + L++E++ N L ++ + + L + Q + L
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 459 AYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDP 518
A+ H I HRD+K N+L++ K+ DFGL+R ++ S+ TL Y P
Sbjct: 122 AFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAP 177
Query: 519 EYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDDVNL 560
+ + S D++S G +L E++T + + D + + L
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL 220
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 43/255 (16%)
Query: 338 LKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVL 390
+KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 391 NEVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKY 437
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---- 116
Query: 438 SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSR 496
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG
Sbjct: 117 -ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGA 164
Query: 497 LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDP 555
L K V T GT Y PE+ R ++ +S V+S G++L +++ I F D
Sbjct: 165 LLK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDE 219
Query: 556 DDVNLAIYVSQRASN 570
+ + ++ QR S+
Sbjct: 220 EIIRGQVFFRQRVSS 234
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 43/255 (16%)
Query: 338 LKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVL 390
+KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 391 NEVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKY 437
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---- 116
Query: 438 SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSR 496
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG
Sbjct: 117 -ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGA 164
Query: 497 LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDP 555
L K V T GT Y PE+ R ++ +S V+S G++L +++ I F D
Sbjct: 165 LLK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDE 219
Query: 556 DDVNLAIYVSQRASN 570
+ + ++ QR S+
Sbjct: 220 EIIRGQVFFRQRVSS 234
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 354 LGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+G G G V ++ G +VAVK + + + + NEV I+ H+N+V + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 413 EAEQPLLIYEYIANGTLHDHL-HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
++ ++ E++ G L D + H + + + + L +AL+ LH+ + H
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIH 150
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSD 531
RD+KS +ILL D K++DFG + GT ++ PE + D
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVD 209
Query: 532 VYSYGVVLLELLTSQ 546
++S G++++E++ +
Sbjct: 210 IWSLGIMVIEMVDGE 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 354 LGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+G G G V ++ G +VAVK + + + + NEV I+ H+N+V + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 413 EAEQPLLIYEYIANGTLHDHL-HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
++ ++ E++ G L D + H + + + + L +AL+ LH+ + H
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIH 139
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSD 531
RD+KS +ILL D K++DFG + GT ++ PE + D
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVD 198
Query: 532 VYSYGVVLLELLTSQ 546
++S G++++E++ +
Sbjct: 199 IWSLGIMVIEMVDGE 213
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 43/255 (16%)
Query: 338 LKELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVL 390
+KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 391 NEVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKY 437
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---- 116
Query: 438 SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSR 496
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG
Sbjct: 117 -ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGA 164
Query: 497 LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDP 555
L K V T GT Y PE+ R ++ +S V+S G++L +++ I F D
Sbjct: 165 LLK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDE 219
Query: 556 DDVNLAIYVSQRASN 570
+ + ++ QR S+
Sbjct: 220 EIIRGQVFFRQRVSS 234
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 61
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEAL 458
+NH N+V+LL + L++E+++ L D + + + Q + L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALT-GIPLPLIKSYLFQLLQGL 119
Query: 459 AYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLD 517
A+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 518 PE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
PE YY + D++S G + E++T +
Sbjct: 175 PEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 387 QQVLNEVGILSQVN-HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWS 445
+ L EV IL +V+ H N+++L L+++ + G L D+L K + L+
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEK 124
Query: 446 TRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHV 505
+I E + LH I HRD+K NILLDDD N K+ DFG S PG
Sbjct: 125 ETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 181
Query: 506 STCAQGTLGYLDPEYYR-----NYQLTDKS-DVYSYGVVLLELL 543
C GT YL PE N+ K D++S GV++ LL
Sbjct: 182 EVC--GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++S + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT YL P + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEYLAPAIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 23/190 (12%)
Query: 370 GTVVAVKSAKVGNIKSTQQVLNEV--------GILSQV-NHKNLVRLLGCCVEAEQPLLI 420
G AVK +V + + + L EV IL QV H +++ L+ + L+
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 421 YEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNIL 480
++ + G L D+L K + L+ I EA+++LH+ I HRD+K NIL
Sbjct: 179 FDLMRKGELFDYLTEKVA---LSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENIL 232
Query: 481 LDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR------NYQLTDKSDVYS 534
LDD+ +++DFG S +PG C GT GYL PE + + + D+++
Sbjct: 233 LDDNMQIRLSDFGFSCHLEPGEKLRELC--GTPGYLAPEILKCSMDETHPGYGKEVDLWA 290
Query: 535 YGVVLLELLT 544
GV+L LL
Sbjct: 291 CGVILFTLLA 300
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV--NHKNLVRLLGCC 411
+G G +GEV+ G+ + G VAVK V E I V H+N++ +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVK---VFFTTEEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 412 VEAE----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
++ Q LI +Y NG+L+D+L S L + L++A + L +LH+ ++
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 468 -----PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVS---TCAQGTLGYLDPE 519
I HRD+KS NIL+ + +AD GL+ + V GT Y+ PE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 520 YY-----RN-YQLTDKSDVYSYGVVLLEL 542
RN +Q +D+YS+G++L E+
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 354 LGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+G G G V E G VAVK + + + + NEV I+ H N+V + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
E+ ++ E++ G L D + S L + +ALAYLH+ + HR
Sbjct: 113 VGEELWVLMEFLQGGALTDIV----SQVRLNEEQIATVCEAVLQALAYLHAQG---VIHR 165
Query: 473 DVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDV 532
D+KS +ILL D K++DFG + GT ++ PE + D+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDI 224
Query: 533 YSYGVVLLELLTSQKAIDFSRDP 555
+S G++++E++ + FS P
Sbjct: 225 WSLGIMVIEMVDGEPPY-FSDSP 246
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 60
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEAL 458
+NH N+V+LL + L++E+++ L D + + + Q + L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALT-GIPLPLIKSYLFQLLQGL 118
Query: 459 AYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLD 517
A+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y
Sbjct: 119 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 173
Query: 518 PE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
PE YY + D++S G + E++T +
Sbjct: 174 PEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 203
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 19/195 (9%)
Query: 370 GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
G +VAVK + + + + NEV I+ H+N+V + + ++ ++ E++ G L
Sbjct: 99 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158
Query: 430 HDHL-HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
D + H + + + + L +AL+ LH+ + HRD+KS +ILL D K
Sbjct: 159 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 210
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ-- 546
++DFG + GT ++ PE + D++S G++++E++ +
Sbjct: 211 LSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
Query: 547 -------KAIDFSRD 554
KA+ RD
Sbjct: 270 YFNEPPLKAMKMIRD 284
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 354 LGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+G G G V ++ G +VAVK + + + + NEV I+ H+N+V + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 413 EAEQPLLIYEYIANGTLHDHL-HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
++ ++ E++ G L D + H + + + + L +AL+ LH+ + H
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIH 143
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSD 531
RD+KS +ILL D K++DFG + GT ++ PE + D
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVD 202
Query: 532 VYSYGVVLLELLTSQ 546
++S G++++E++ +
Sbjct: 203 IWSLGIMVIEMVDGE 217
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 43/254 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 143
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 144 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 192
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 193 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 247
Query: 557 DVNLAIYVSQRASN 570
+ ++ QR S+
Sbjct: 248 IIGGQVFFRQRVSS 261
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+ ++ + ST + E+ +L ++NH
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPST--AIREISLLKELNHP 62
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 172
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 173 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 32/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHK 402
F K +G G +G VYK + G VVA+ ++ + ST + E+ +L ++NH
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPST--AIREISLLKELNHP 61
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA---LQTAEALA 459
N+V+LL + L++E+ LH L + LT I Q + LA
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDP 518
+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL Y P
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 171
Query: 519 E------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
E YY + D++S G + E++T +
Sbjct: 172 EILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 43/254 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 143
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 144 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 192
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 193 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 247
Query: 557 DVNLAIYVSQRASN 570
+ ++ QR S+
Sbjct: 248 IIGGQVFFRQRVSS 261
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 43/254 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 143
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 144 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 192
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 193 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 247
Query: 557 DVNLAIYVSQRASN 570
+ ++ QR S+
Sbjct: 248 IIRGQVFFRQRVSS 261
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 43/254 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 144
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 145 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 193
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 194 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 248
Query: 557 DVNLAIYVSQRASN 570
+ ++ QR S+
Sbjct: 249 IIGGQVFFRQRVSS 262
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 43/254 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 131
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 132 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 180
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 181 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 235
Query: 557 DVNLAIYVSQRASN 570
+ ++ QR S+
Sbjct: 236 IIRGQVFFRQRVSS 249
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 43/254 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 150
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 151 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 199
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 200 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 254
Query: 557 DVNLAIYVSQRASN 570
+ ++ QR S+
Sbjct: 255 IIRGQVFFRQRVSS 268
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 43/253 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 163
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 164 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 212
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 213 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 267
Query: 557 DVNLAIYVSQRAS 569
+ ++ QR S
Sbjct: 268 IIRGQVFFRQRVS 280
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 43/253 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 144
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 145 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 193
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 194 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 248
Query: 557 DVNLAIYVSQRAS 569
+ ++ QR S
Sbjct: 249 IIGGQVFFRQRVS 261
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 43/254 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 130
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 131 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 179
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 180 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 234
Query: 557 DVNLAIYVSQRASN 570
+ ++ QR S+
Sbjct: 235 IIRGQVFFRQRVSS 248
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 43/254 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 144
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 145 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 193
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 194 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 248
Query: 557 DVNLAIYVSQRASN 570
+ ++ QR S+
Sbjct: 249 IIGGQVFFRQRVSS 262
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 21/243 (8%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLR 449
EV +L +V+ ++RLL + +LI E + + D L
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERME--PVQDLFDFITERGALQEELARS 118
Query: 450 IALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTC 508
Q EA+ + H+ + HRD+K NIL+D + K+ DFG L K V T
Sbjct: 119 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTD 172
Query: 509 AQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQR 567
GT Y PE+ R ++ +S V+S G++L +++ I F D + + ++ QR
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQVFFRQR 230
Query: 568 ASN 570
S+
Sbjct: 231 VSS 233
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 43/253 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 143
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 144 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 192
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 193 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 247
Query: 557 DVNLAIYVSQRAS 569
+ ++ QR S
Sbjct: 248 IIGGQVFFRQRVS 260
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 43/253 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 144
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 145 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 193
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 194 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 248
Query: 557 DVNLAIYVSQRAS 569
+ ++ QR S
Sbjct: 249 IIGGQVFFRQRVS 261
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 332 PARIFHLKELKKATNGFSKERILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQVL 390
PA IF L EL +G+G +G+VYKG ++ G + A+K V +++
Sbjct: 22 PAGIFELVEL------------VGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIK 68
Query: 391 NEVGILSQV-NHKNLVRLLGCCVEAEQP------LLIYEYIANGTLHDHLHG-KYSSFNL 442
E+ +L + +H+N+ G ++ P L+ E+ G++ D + K ++
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 443 TWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL 502
W I + L++LH + HRD+K N+LL ++ K+ DFG+S +
Sbjct: 129 EWIAY--ICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183
Query: 503 SHVSTCAQGTLGYLDPEYYRNYQLTD-----KSDVYSYGVVLLEL 542
+T GT ++ PE + D KSD++S G+ +E+
Sbjct: 184 GRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 43/253 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 130
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 131 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 179
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 180 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 234
Query: 557 DVNLAIYVSQRAS 569
+ ++ QR S
Sbjct: 235 IIRGQVFFRQRVS 247
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 43/253 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 158
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 159 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 207
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 208 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 262
Query: 557 DVNLAIYVSQRAS 569
+ ++ QR S
Sbjct: 263 IIRGQVFFRQRVS 275
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 43/253 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 131
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 132 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 180
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 181 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 235
Query: 557 DVNLAIYVSQRAS 569
+ ++ QR S
Sbjct: 236 IIRGQVFFRQRVS 248
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 43/253 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 131
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 132 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 180
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 181 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 235
Query: 557 DVNLAIYVSQRAS 569
+ ++ QR S
Sbjct: 236 IIRGQVFFRQRVS 248
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 407 LLGCCVEAEQPL------LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L + + L+ +Y+ H + L Q +LAY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+HS I HRD+K N+LLD D K+ DFG ++ G +VS Y+
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSR 186
Query: 520 YYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 344 ATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQV--LNEVGILSQVN 400
AT+ + +G G +G VYK + G VA+KS +V N + + + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 401 ---HKNLVRLLGCCVEAE-----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIAL 452
H N+VRL+ C + + L++E++ + L +L K L T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLD-KAPPPGLPAETIKDLMR 119
Query: 453 QTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGT 512
Q L +LH+ I HRD+K NIL+ K+ADFGL+R+ ++ T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--T 174
Query: 513 LGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
L Y PE D++S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 43/254 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 158
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 159 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 207
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 208 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 262
Query: 557 DVNLAIYVSQRASN 570
+ ++ QR S+
Sbjct: 263 IIRGQVFFRQRVSS 276
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 90
Query: 407 L---LGCCVEAEQPL---LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L E + + L+ +Y+ H + L Q +LAY
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+HS I HRD+K N+LLD D K+ DFG ++ G +VS Y+
Sbjct: 151 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSR 199
Query: 520 YYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 43/254 (16%)
Query: 339 KELKKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLN 391
KE + + + +LGSGGFG VY G + D VA+K + G + + +V
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 392 EVGILSQVN--HKNLVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYS 438
EV +L +V+ ++RLL + +LI +++I G L + L
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----- 115
Query: 439 SFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRL 497
+ + W Q EA+ + H+ + HRD+K NIL+D + K+ DFG L
Sbjct: 116 ARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 164
Query: 498 AKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPD 556
K V T GT Y PE+ R ++ +S V+S G++L +++ I F D +
Sbjct: 165 LK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 219
Query: 557 DVNLAIYVSQRASN 570
+ ++ QR S+
Sbjct: 220 IIRGQVFFRQRVSS 233
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 354 LGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL---- 408
LG GG G V+ D VA+K + + +S + L E+ I+ +++H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 409 ----------GCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEAL 458
G E ++ EY+ + G L RL Q L
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPL----LEEHARL-FMYQLLRGL 133
Query: 459 AYLHSAAYTPIYHRDVKSTNILLD-DDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
Y+HSA + HRD+K N+ ++ +D K+ DFGL+R+ P SH ++G L
Sbjct: 134 KYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG----LV 186
Query: 518 PEYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
++YR+ +L T D+++ G + E+LT +
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 105
Query: 407 L---LGCCVEAEQPL---LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L E + + L+ +Y+ H + L Q +LAY
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+HS I HRD+K N+LLD D K+ DFG ++ G +VS Y+
Sbjct: 166 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSR 214
Query: 520 YYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 407 L---LGCCVEAEQPL---LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L E + + L+ +Y+ H + L Q +LAY
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+HS I HRD+K N+LLD D K+ DFG ++ G +VS Y+
Sbjct: 172 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSR 220
Query: 520 YYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 27/234 (11%)
Query: 315 LAKEREDMLKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQD-GTVV 373
LAK +ED LK + + F + + LG+G FG V + ++ G
Sbjct: 19 LAKAKEDFLKKWETPSQNT---------AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 374 AVK---SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLH 430
A+K KV +K + LNE IL VN LV+L + ++ EY+A G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 431 DHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSK 488
HL G++S + + A Q YLHS + +RD+K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARF-----YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 489 VADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEL 542
V DFG ++ K + C GT L PE + D ++ GV++ E+
Sbjct: 182 VTDFGFAKRVKGRTWXL--C--GTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 113
Query: 407 L---LGCCVEAEQPL---LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L E + + L+ +Y+ H + L Q +LAY
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+HS I HRD+K N+LLD D K+ DFG ++ G +VS Y+
Sbjct: 174 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSR 222
Query: 520 YYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 82
Query: 407 L---LGCCVEAEQPL---LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L E + + L+ +Y+ H + L Q +LAY
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+HS I HRD+K N+LLD D K+ DFG ++ G +VS Y+
Sbjct: 143 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSR 191
Query: 520 YYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 115
Query: 407 L---LGCCVEAEQPL---LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L E + + L+ +Y+ H + L Q +LAY
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+HS I HRD+K N+LLD D K+ DFG ++ G +VS Y+
Sbjct: 176 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSR 224
Query: 520 YYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 145
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 206 SIDIWSVGCILAEMLSNR 223
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 43/240 (17%)
Query: 353 ILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLNEVGILSQVN--HKN 403
+LGSGGFG VY G + D VA+K + G + + +V EV +L +V+
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 404 LVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYSSFNLTWSTRLRIAL 452
++RLL + +LI +++I G L + L + + W
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-----ARSFFW-------- 120
Query: 453 QTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQG 511
Q EA+ + H+ + HRD+K NIL+D + K+ DFG L K V T G
Sbjct: 121 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDG 174
Query: 512 TLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASN 570
T Y PE+ R ++ +S V+S G++L +++ I F D + + ++ QR S+
Sbjct: 175 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQVFFRQRVSS 232
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 14/149 (9%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVKSA--KVGNIKSTQQVLNEVGILSQVN-HKNLVRLLG 409
LG G +G V+K + + G VVAVK N Q+ E+ IL++++ H+N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 410 C--CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
L+++Y+ LH + L + + Q + + YLHS
Sbjct: 77 VLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG-- 129
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSR 496
+ HRD+K +NILL+ + + KVADFGLSR
Sbjct: 130 -LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 43/240 (17%)
Query: 353 ILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLNEVGILSQVN--HKN 403
+LGSGGFG VY G + D VA+K + G + + +V EV +L +V+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 404 LVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYSSFNLTWSTRLRIAL 452
++RLL + +LI +++I G L + L + + W
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-----ARSFFW-------- 117
Query: 453 QTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQG 511
Q EA+ + H+ + HRD+K NIL+D + K+ DFG L K V T G
Sbjct: 118 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDG 171
Query: 512 TLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASN 570
T Y PE+ R ++ +S V+S G++L +++ I F D + + ++ QR S+
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQVFFRQRVSS 229
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 156
Query: 407 L---LGCCVEAEQPL---LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L E + + L+ +Y+ H + L Q +LAY
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+HS I HRD+K N+LLD D K+ DFG ++ G +VS Y+
Sbjct: 217 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSR 265
Query: 520 YYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 152
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 212
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 213 SIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 153
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 213
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 214 SIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 144
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 204
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 205 SIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 43/240 (17%)
Query: 353 ILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLNEVGILSQVN--HKN 403
+LGSGGFG VY G + D VA+K + G + + +V EV +L +V+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 404 LVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYSSFNLTWSTRLRIAL 452
++RLL + +LI +++I G L + L + + W
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-----ARSFFW-------- 117
Query: 453 QTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQG 511
Q EA+ + H+ + HRD+K NIL+D + K+ DFG L K V T G
Sbjct: 118 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDG 171
Query: 512 TLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASN 570
T Y PE+ R ++ +S V+S G++L +++ I F D + + ++ QR S+
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIGGQVFFRQRVSS 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 145
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 206 SIDIWSVGCILAEMLSNR 223
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 43/239 (17%)
Query: 353 ILGSGGFGEVYKG-ELQDGTVVAVKSAK------VGNIKSTQQVLNEVGILSQVN--HKN 403
+LGSGGFG VY G + D VA+K + G + + +V EV +L +V+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 404 LVRLLGCCVEAEQPLLI----------YEYIAN-GTLHDHLHGKYSSFNLTWSTRLRIAL 452
++RLL + +LI +++I G L + L + + W
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-----ARSFFW-------- 117
Query: 453 QTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQG 511
Q EA+ + H+ + HRD+K NIL+D + K+ DFG L K V T G
Sbjct: 118 QVLEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDG 171
Query: 512 TLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRAS 569
T Y PE+ R ++ +S V+S G++L +++ I F D + + ++ QR S
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQVFFRQRVS 228
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 61
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA----LQT 454
+NH N+V+LL + L++E++ D K+ + L + Q
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHV------DQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTL 513
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 170
Query: 514 GYLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 171 WYRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 342 KKATNGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILS 397
K N F ++LG G FG+V E G A+K + I + +V + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAE 456
H L L ++ + EY G L HL S + R R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVS 116
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLG 514
AL YLHS + +RD+K N++LD D + K+ DFG L K G+S +T GT
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG---LCKEGISDGATMKTFCGTPE 170
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
YL PE + D + GVV+ E++
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V V VA+K ++ Q+ L E+ IL + H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 211
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 152
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 212
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 213 SIDIWSVGCILAEMLSNR 230
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 342 KKATNGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILS 397
K N F ++LG G FG+V E G A+K + I + +V + E +L
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAE 456
H L L ++ + EY G L HL S + R R +
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVS 119
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLG 514
AL YLHS + +RD+K N++LD D + K+ DFG L K G+S +T GT
Sbjct: 120 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG---LCKEGISDGATMKTFCGTPE 173
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
YL PE + D + GVV+ E++
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMM 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 342 KKATNGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILS 397
K N F ++LG G FG+V E G A+K + I + +V + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAE 456
H L L ++ + EY G L HL S + R R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVS 116
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLG 514
AL YLHS + +RD+K N++LD D + K+ DFG L K G+S +T GT
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG---LCKEGISDGATMKXFCGTPE 170
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
YL PE + D + GVV+ E++
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 18/218 (8%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVG----NIKSTQQVLNEVGILSQVNHKN 403
+ K +G G +G VYK + G +VA+K ++ I ST + E+ +L +++H N
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPST--AIREISLLKELHHPN 80
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIAL-QTAEALAYLH 462
+V L+ L++E++ L L + ++++I L Q +A+ H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHCH 136
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDPEYY 521
I HRD+K N+L++ D K+ADFGL+R P S+ TL Y P+
Sbjct: 137 QHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVL 191
Query: 522 RNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDDV 558
+ S D++S G + E++T + D D +
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 18/218 (8%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVG----NIKSTQQVLNEVGILSQVNHKN 403
+ K +G G +G VYK + G +VA+K ++ I ST + E+ +L +++H N
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPST--AIREISLLKELHHPN 80
Query: 404 LVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIAL-QTAEALAYLH 462
+V L+ L++E++ L L + ++++I L Q +A+ H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHCH 136
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDPEYY 521
I HRD+K N+L++ D K+ADFGL+R P S+ TL Y P+
Sbjct: 137 QHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVL 191
Query: 522 RNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDDV 558
+ S D++S G + E++T + D D +
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 348 FSKERILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQV--LNEVGILSQVNHKNL 404
+ K +G G FGEV+K + G VA+K + N K + L E+ IL + H+N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 405 VRLLGCCVEAEQPL--------LIYEYIANGTLHDHLHGKYSSF--NLTWSTRLRIALQT 454
V L+ C P L++++ HD L G S+ T S R+
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCE----HD-LAGLLSNVLVKFTLSEIKRVMQML 134
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR---LAKPGLSHVSTCAQG 511
L Y+H I HRD+K+ N+L+ D K+ADFGL+R LAK +
Sbjct: 135 LNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 512 TLGYLDPEYY---RNYQLTDKSDVYSYGVVLLELLT 544
TL Y PE R+Y D++ G ++ E+ T
Sbjct: 192 TLWYRPPELLLGERDY--GPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 348 FSKERILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQV--LNEVGILSQVNHKNL 404
+ K +G G FGEV+K + G VA+K + N K + L E+ IL + H+N+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 405 VRLLGCCVEAEQPL--------LIYEYIANGTLHDHLHGKYSSF--NLTWSTRLRIALQT 454
V L+ C P L++++ HD L G S+ T S R+
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCE----HD-LAGLLSNVLVKFTLSEIKRVMQML 133
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR---LAKPGLSHVSTCAQG 511
L Y+H I HRD+K+ N+L+ D K+ADFGL+R LAK +
Sbjct: 134 LNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 512 TLGYLDPEYY---RNYQLTDKSDVYSYGVVLLELLT 544
TL Y PE R+Y D++ G ++ E+ T
Sbjct: 191 TLWYRPPELLLGERDY--GPPIDLWGAGCIMAEMWT 224
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 19/218 (8%)
Query: 354 LGSGGFGEVYKG-ELQDG-TVVAVKSAKV--GNIKSTQQVLNEVGILSQVN---HKNLVR 406
+G G +G+V+K +L++G VA+K +V G + EV +L + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 407 LLGCCV----EAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
L C + E L L++E++ + L +L K + T + Q L +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY 521
HS + HRD+K NIL+ K+ADFGL+R+ ++ S TL Y PE
Sbjct: 137 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVL 191
Query: 522 RNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
D++S G + E+ + S D D +
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K G + E+ I+ +++H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVR 77
Query: 407 LLGCCVEAEQPL------LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L + + L+ +Y+ H + L Q +LAY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDP 518
+HS I HRD+K N+LLD D K+ DFG ++ G +VS C++
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-------- 186
Query: 519 EYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 187 -YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 342 KKATNGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILS 397
K N F ++LG G FG+V E G A+K + I + +V + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAE 456
H L L ++ + EY G L HL S + R R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVS 116
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLG 514
AL YLHS + +RD+K N++LD D + K+ DFG L K G+S +T GT
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG---LCKEGISDGATMKTFCGTPE 170
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
YL PE + D + GVV+ E++
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 354 LGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQV--LNEVGILSQVNHKNLVRLLGC 410
+G G FGEV+K + G VA+K + N K + L E+ IL + H+N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 411 CVEAEQPL--------LIYEYIANGTLHDHLHGKYSSF--NLTWSTRLRIALQTAEALAY 460
C P L++++ HD L G S+ T S R+ L Y
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCE----HD-LAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR---LAKPGLSHVSTCAQGTLGYLD 517
+H I HRD+K+ N+L+ D K+ADFGL+R LAK + TL Y
Sbjct: 141 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 518 PEYY---RNYQLTDKSDVYSYGVVLLELLT 544
PE R+Y D++ G ++ E+ T
Sbjct: 198 PELLLGERDY--GPPIDLWGAGCIMAEMWT 225
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 342 KKATNGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILS 397
K N F ++LG G FG+V E G A+K + I + +V + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAE 456
H L L ++ + EY G L HL S + R R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVS 116
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLG 514
AL YLHS + +RD+K N++LD D + K+ DFG L K G+S +T GT
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG---LCKEGISDGATMKXFCGTPE 170
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
YL PE + D + GVV+ E++
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 19/218 (8%)
Query: 354 LGSGGFGEVYKG-ELQDG-TVVAVKSAKV--GNIKSTQQVLNEVGILSQVN---HKNLVR 406
+G G +G+V+K +L++G VA+K +V G + EV +L + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 407 LLGCCV----EAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
L C + E L L++E++ + L +L K + T + Q L +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY 521
HS + HRD+K NIL+ K+ADFGL+R+ ++ S TL Y PE
Sbjct: 137 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVL 191
Query: 522 RNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
D++S G + E+ + S D D +
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 342 KKATNGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILS 397
K N F ++LG G FG+V E G A+K + I + +V + E +L
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAE 456
H L L ++ + EY G L HL S + R R +
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVS 121
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLG 514
AL YLHS + +RD+K N++LD D + K+ DFG L K G+S +T GT
Sbjct: 122 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG---LCKEGISDGATMKXFCGTPE 175
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
YL PE + D + GVV+ E++
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 348 FSKERILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQV--LNEVGILSQVNHKNL 404
+ K +G G FGEV+K + G VA+K + N K + L E+ IL + H+N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 405 VRLLGCCVEAEQPL--------LIYEYIANGTLHDHLHGKYSSF--NLTWSTRLRIALQT 454
V L+ C P L++++ HD L G S+ T S R+
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCE----HD-LAGLLSNVLVKFTLSEIKRVMQML 134
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR---LAKPGLSHVSTCAQG 511
L Y+H I HRD+K+ N+L+ D K+ADFGL+R LAK +
Sbjct: 135 LNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 512 TLGYLDPEYY---RNYQLTDKSDVYSYGVVLLELLT 544
TL Y PE R+Y D++ G ++ E+ T
Sbjct: 192 TLWYRPPELLLGERDY--GPPIDLWGAGCIMAEMWT 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 19/218 (8%)
Query: 354 LGSGGFGEVYKG-ELQDG-TVVAVKSAKV--GNIKSTQQVLNEVGILSQVN---HKNLVR 406
+G G +G+V+K +L++G VA+K +V G + EV +L + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 407 LLGCCV----EAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
L C + E L L++E++ + L +L K + T + Q L +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY 521
HS + HRD+K NIL+ K+ADFGL+R+ ++ S TL Y PE
Sbjct: 137 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVL 191
Query: 522 RNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVN 559
D++S G + E+ + S D D +
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 342 KKATNGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILS 397
K N F ++LG G FG+V E G A+K + I + +V + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAE 456
H L L ++ + EY G L HL S + R R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVS 116
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLG 514
AL YLHS + +RD+K N++LD D + K+ DFG L K G+S +T GT
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG---LCKEGISDGATMKXFCGTPE 170
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
YL PE + D + GVV+ E++
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 61
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA----LQT 454
+NH N+V+LL + L++E+++ K+ + L + Q
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDL------KKFMDASALTGIPLPLIKSYLFQL 115
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTL 513
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 170
Query: 514 GYLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 171 WYRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V V VA+K ++ Q+ L E+ IL + H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 344 ATNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQ 398
+ F K +G G +G VYK + G VVA+K ++ + ST + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKE 59
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIA----LQT 454
+NH N+V+LL + L++E+++ K+ + L + Q
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLSMDL------KKFMDASALTGIPLPLIKSYLFQL 113
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTL 513
+ LA+ HS + HRD+K N+L++ + K+ADFGL+R P ++ TL
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 168
Query: 514 GYLDPE------YYRNYQLTDKSDVYSYGVVLLELLTSQ 546
Y PE YY + D++S G + E++T +
Sbjct: 169 WYRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 202
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKS-AKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V V VA+K + + Q+ L E+ IL + H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 407 LLGCCVEAEQPL------LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L + + L+ +Y+ H + L Q +LAY
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDP 518
+HS I HRD+K N+LLD D K+ DFG ++ G +VS C++
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-------- 186
Query: 519 EYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 187 -YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 323 LKSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVY---KGELQD-GTVVAVKSA 378
L+++N+ G ++ F ++LG+G +G+V+ K D G + A+K
Sbjct: 39 LRTANLTGHAEKV--------GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVL 90
Query: 379 KVGNI----KSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPL-LIYEYIANGTLHDHL 433
K I K+T+ E +L + + L + E L LI +YI G L HL
Sbjct: 91 KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL 150
Query: 434 HGKYSSFNLTWSTRLRIALQTAE---ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVA 490
+ F T + + E AL +LH I +RD+K NILLD + + +
Sbjct: 151 -SQRERF-----TEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLT 201
Query: 491 DFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT-DKS-DVYSYGVVLLELLTS 545
DFGLS+ + + GT+ Y+ P+ R DK+ D +S GV++ ELLT
Sbjct: 202 DFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 407 LLGCCVEAEQPL------LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L + + L+ +Y+ H + L Q +LAY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDP 518
+HS I HRD+K N+LLD D K+ DFG ++ G +VS C++
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-------- 186
Query: 519 EYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 187 -YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V V VA+K ++ Q+ L E+ IL + H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 407 LLGCCVEAEQPL------LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L + + L+ +Y+ H + L Q +LAY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDP 518
+HS I HRD+K N+LLD D K+ DFG ++ G +VS C++
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-------- 186
Query: 519 EYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 187 -YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKS-AKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V V VA+K + + Q+ L E+ IL + H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 210 SIDIWSVGCILAEMLSNR 227
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 81
Query: 407 LLGCCVEAEQPL------LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L + + L+ +Y+ H + L Q +LAY
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDP 518
+HS I HRD+K N+LLD D K+ DFG ++ G +VS C++
Sbjct: 142 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-------- 190
Query: 519 EYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 191 -YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 96
Query: 407 L---LGCCVEAEQPL---LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L E + + L+ +Y+ H + L Q +LAY
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDP 518
+HS I HRD+K N+LLD D K+ DFG ++ G +VS C++
Sbjct: 157 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-------- 205
Query: 519 EYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 206 -YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 78
Query: 407 LLGCCVEAEQPL------LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L + + L+ +Y+ H + L Q +LAY
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDP 518
+HS I HRD+K N+LLD D K+ DFG ++ G +VS C++
Sbjct: 139 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-------- 187
Query: 519 EYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 188 -YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 85
Query: 407 L---LGCCVEAEQPL---LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L E + + L+ +Y+ H + L Q +LAY
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDP 518
+HS I HRD+K N+LLD D K+ DFG ++ G +VS C++
Sbjct: 146 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-------- 194
Query: 519 EYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 195 -YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKG--ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V L V K + + Q+ L E+ IL + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ +L+ Q L Y+HSA + H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKS-AKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V V VA+K + + Q+ L E+ IL + H+N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 155
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 215
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 216 SIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKS-AKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V V VA+K + + Q+ L E+ IL + H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 407 L---LGCCVEAEQPL---LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L E + + L+ +Y+ H + L Q +LAY
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDP 518
+HS I HRD+K N+LLD D K+ DFG ++ G +VS C++
Sbjct: 172 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-------- 220
Query: 519 EYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 221 -YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 16/224 (7%)
Query: 332 PARIFHLKELKKATNGFSKE----RILGSGGFGEV---YKGELQDGTVVAVKSAKVGNIK 384
P F+ +EL K + R +GSG +G V Y L+ V S ++
Sbjct: 10 PRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLI 69
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYE-YIANGTLHDHLHGKYSSFNLT 443
++ E+ +L + H+N++ LL A E Y+ + L+ S L+
Sbjct: 70 HARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALS 129
Query: 444 WSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLS 503
+ Q L Y+HSA I HRD+K +N+ +++D ++ DFGL+R A +
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEM- 185
Query: 504 HVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQ 546
T T Y PE N+ +++ D++S G ++ ELL +
Sbjct: 186 ---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 352 RILGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQ-QVLNEVGILSQVNHKNLVRL 407
+ LG G FG+V Y + + + KV Q ++ E+ L + H ++++L
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
++ +++ EY N L D++ ++ R Q A+ Y H
Sbjct: 70 YDVIKSKDEIIMVIEYAGN-ELFDYI---VQRDKMSEQEARRFFQQIISAVEYCHRHK-- 123
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
I HRD+K N+LLD+ N K+ADFGLS + G ++C G+ Y PE
Sbjct: 124 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYA 180
Query: 528 D-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L +L + D
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 89/204 (43%), Gaps = 14/204 (6%)
Query: 346 NGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNH 401
N F ++LG G FG+V E G A+K K I + +V L E +L H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAEALAY 460
L L ++ + EY G L HL S + R R + AL Y
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDY 263
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA-KPGLSHVSTCAQGTLGYLDPE 519
LHS + +RD+K N++LD D + K+ DFGL + K G + + C GT YL PE
Sbjct: 264 LHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC--GTPEYLAPE 319
Query: 520 YYRNYQLTDKSDVYSYGVVLLELL 543
+ D + GVV+ E++
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMM 343
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 89/204 (43%), Gaps = 14/204 (6%)
Query: 346 NGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNH 401
N F ++LG G FG+V E G A+K K I + +V L E +L H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAEALAY 460
L L ++ + EY G L HL S + R R + AL Y
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDY 266
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA-KPGLSHVSTCAQGTLGYLDPE 519
LHS + +RD+K N++LD D + K+ DFGL + K G + + C GT YL PE
Sbjct: 267 LHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC--GTPEYLAPE 322
Query: 520 YYRNYQLTDKSDVYSYGVVLLELL 543
+ D + GVV+ E++
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMM 346
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 407 L---LGCCVEAEQPL---LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L E + + L+ +Y+ H + L Q +LAY
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDP 518
+HS I HRD+K N+LLD D K+ DFG ++ G +VS C++
Sbjct: 150 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-------- 198
Query: 519 EYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 199 -YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGEVYKGELQD-GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVR 406
++ +++G+G FG VY+ +L D G +VA+K KV K + E+ I+ +++H N+VR
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 407 LLGCCVEAEQPL------LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
L + + L+ +Y+ H + L Q +LAY
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDP 518
+HS I HRD+K N+LLD D K+ DFG ++ G +VS C++
Sbjct: 150 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-------- 198
Query: 519 EYYRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YYR +L T DV+S G VL ELL Q
Sbjct: 199 -YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKS-AKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V V VA+K + + Q+ L E+ IL + H+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 167
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 228 SIDIWSVGCILAEMLSNR 245
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVL--NEVGILSQVNHKNLVRLLGCC 411
LG G FG V++ + + AK +K T QVL E+ IL+ H+N++ L
Sbjct: 13 LGRGEFGIVHR--CVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
E+ ++I+E+I+ + + ++ S+F L + Q EAL +LHS I H
Sbjct: 71 ESMEELVMIFEFISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHSH---NIGH 125
Query: 472 RDVKSTNILLDDDFNS--KVADFGLSRLAKPG--LSHVSTCAQGTLGYLDPEYYRNYQLT 527
D++ NI+ +S K+ +FG +R KPG + T + Y PE +++ ++
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE----YYAPEVHQHDVVS 181
Query: 528 DKSDVYSYGVVLLELLT 544
+D++S G ++ LL+
Sbjct: 182 TATDMWSLGTLVYVLLS 198
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 28/209 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV--NHKNLVRLLGCC 411
+G G +GEV++G Q G VAVK + + + + E + + V H+N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 412 VEAE----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
+ + Q LI Y G+L+D+L L + LRI L A LA+LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 468 -----PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYLDPE 519
I HRD+KS NIL+ + +AD GL+ + + + GT Y+ PE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 520 YYRNYQLTD------KSDVYSYGVVLLEL 542
D + D++++G+VL E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 352 RILGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQ-QVLNEVGILSQVNHKNLVRL 407
+ LG G FG+V Y + + + KV Q ++ E+ L + H ++++L
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
++ +++ EY N L D++ ++ R Q A+ Y H
Sbjct: 80 YDVIKSKDEIIMVIEYAGN-ELFDYI---VQRDKMSEQEARRFFQQIISAVEYCHRHK-- 133
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
I HRD+K N+LLD+ N K+ADFGLS + G ++C G+ Y PE
Sbjct: 134 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYA 190
Query: 528 D-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L +L + D
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 28/209 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV--NHKNLVRLLGCC 411
+G G +GEV++G Q G VAVK + + + + E + + V H+N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 412 VEAE----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
+ + Q LI Y G+L+D+L L + LRI L A LA+LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 468 -----PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYLDPE 519
I HRD+KS NIL+ + +AD GL+ + + + GT Y+ PE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 520 YYRNYQLTD------KSDVYSYGVVLLEL 542
D + D++++G+VL E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 352 RILGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQ-QVLNEVGILSQVNHKNLVRL 407
+ LG G FG+V Y + + + KV Q ++ E+ L + H ++++L
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
++ +++ EY N L D++ ++ R Q A+ Y H
Sbjct: 79 YDVIKSKDEIIMVIEYAGN-ELFDYI---VQRDKMSEQEARRFFQQIISAVEYCHRHK-- 132
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
I HRD+K N+LLD+ N K+ADFGLS + G ++C G+ Y PE
Sbjct: 133 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYA 189
Query: 528 D-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L +L + D
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 353 ILGSGGFGEVY----KGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
+LG G FG+V KG + + +K V + + E +L+ ++ + L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 409 GCCVEAEQPL-LIYEYIANGTLHDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
C + L + EY+ G L H+ GK+ + A + + L +LH
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF-----YAAEISIGLFFLHKRG 140
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRL-AKPGLSHVSTCAQGTLGYLDPEYYRNY 524
I +RD+K N++LD + + K+ADFG+ + G++ C GT Y+ PE Y
Sbjct: 141 ---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC--GTPDYIAPEII-AY 194
Query: 525 QLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
Q KS D ++YGV+L E+L Q D D D++ +I
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQPPFD-GEDEDELFQSI 232
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 354 LGSGGFGEVYKGELQD-GTVVAVK----SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
+G G +G V+K +D G +VA+K S IK L E+ +L Q+ H NLV LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKI--ALREIRMLKQLKHPNLVNLL 68
Query: 409 GCCVEAEQPLLIYEYIANGTLHD---HLHG--KYSSFNLTWSTRLRIALQTAEALAYLHS 463
+ L++EY + LH+ + G ++ ++TW QT +A+ + H
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW--------QTLQAVNFCHK 120
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY-R 522
HRDVK NIL+ K+ DFG +RL G S T Y PE
Sbjct: 121 HN---CIHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRSPELLVG 176
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
+ Q DV++ G V ELL+
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 352 RILGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQ-QVLNEVGILSQVNHKNLVRL 407
+ LG G FG+V Y + + + KV Q ++ E+ L + H ++++L
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
++ +++ EY N L D++ ++ R Q A+ Y H
Sbjct: 74 YDVIKSKDEIIMVIEYAGN-ELFDYI---VQRDKMSEQEARRFFQQIISAVEYCHRHK-- 127
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
I HRD+K N+LLD+ N K+ADFGLS + G ++C G+ Y PE
Sbjct: 128 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYA 184
Query: 528 D-KSDVYSYGVVLLELLTSQKAID 550
+ DV+S GV+L +L + D
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 353 ILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
++G G FG+VY G + + + N + EV Q H+N+V +G C+
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+I TL+ + ++ TR +IA + + + YLH+ I H+
Sbjct: 100 SPPHLAIITSLCKGRTLYSVVRDAKIVLDVN-KTR-QIAQEIVKGMGYLHAKG---ILHK 154
Query: 473 DVKSTNILLDDDFNSKV--ADFGL---SRLAKPGLSHVSTCAQ-GTLGYLDPEYYRNYQ- 525
D+KS N+ D N KV DFGL S + + G Q G L +L PE R
Sbjct: 155 DLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP 211
Query: 526 --------LTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVV 577
+ SDV++ G + EL + F P + + Q +
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYEL--HAREWPFKTQPAEA----IIWQMGT-------- 257
Query: 578 DPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVHELQRI 625
G + +++ + K S++ + C ++ ERP+ T ++ L+++
Sbjct: 258 -----GMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 28/209 (13%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQV--NHKNLVRLLGCC 411
+G G +GEV++G Q G VAVK + + + + E + + V H+N++ +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 412 VEAE----QPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
+ + Q LI Y G+L+D+L L + LRI L A LA+LH +
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 468 -----PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ---GTLGYLDPE 519
I HRD+KS NIL+ + +AD GL+ + + + GT Y+ PE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 520 YYRNYQLTD------KSDVYSYGVVLLEL 542
D + D++++G+VL E+
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKS-AKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V V VA+K + + Q+ L E+ IL H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 210 SIDIWSVGCILAEMLSNR 227
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S GV++ E++
Sbjct: 202 YKENVDIWSVGVIMGEMI 219
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKS-AKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+G G +G V V VA+K + + Q+ L E+ IL H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 412 VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYH 471
+ YI + L+ + +L+ Q L Y+HSA + H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 472 RDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQLTDK 529
RD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N + K
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 530 S-DVYSYGVVLLELLTSQ 546
S D++S G +L E+L+++
Sbjct: 210 SIDIWSVGCILAEMLSNR 227
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S GV++ E++
Sbjct: 202 YKENVDIWSVGVIMGEMI 219
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Query: 354 LGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LG GGF V E L DG A+K + ++ E + NH N++RL+ C+
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 413 EA----EQPLLIYEYIANGTLHDHLHGKYSSFN-LTWSTRLRIALQTAEALAYLHSAAYT 467
+ L+ + GTL + + N LT L + L L +H+ Y
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA 156
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLA-------KPGLSHVSTCAQG-TLGYLDPE 519
HRD+K TNILL D+ + D G A + L+ AQ T+ Y PE
Sbjct: 157 ---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 520 YY---RNYQLTDKSDVYSYGVVLLELLTSQKAIDFS-RDPDDVNLAI 562
+ + + +++DV+S G VL ++ + D + D V LA+
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 88/204 (43%), Gaps = 14/204 (6%)
Query: 346 NGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNH 401
N F ++LG G FG+V E G A+K K I + +V L E +L H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAEALAY 460
L L ++ + EY G L HL S + R R + AL Y
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDY 124
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA-KPGLSHVSTCAQGTLGYLDPE 519
LHS + +RD+K N++LD D + K+ DFGL + K G + C GT YL PE
Sbjct: 125 LHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC--GTPEYLAPE 180
Query: 520 YYRNYQLTDKSDVYSYGVVLLELL 543
+ D + GVV+ E++
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMM 204
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 88/204 (43%), Gaps = 14/204 (6%)
Query: 346 NGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNH 401
N F ++LG G FG+V E G A+K K I + +V L E +L H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAEALAY 460
L L ++ + EY G L HL S + R R + AL Y
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDY 125
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA-KPGLSHVSTCAQGTLGYLDPE 519
LHS + +RD+K N++LD D + K+ DFGL + K G + C GT YL PE
Sbjct: 126 LHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC--GTPEYLAPE 181
Query: 520 YYRNYQLTDKSDVYSYGVVLLELL 543
+ D + GVV+ E++
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMM 205
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 88/204 (43%), Gaps = 14/204 (6%)
Query: 346 NGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQV---LNEVGILSQVNH 401
N F ++LG G FG+V E G A+K K I + +V L E +L H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI-ALQTAEALAY 460
L L ++ + EY G L HL S + R R + AL Y
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDY 123
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLA-KPGLSHVSTCAQGTLGYLDPE 519
LHS + +RD+K N++LD D + K+ DFGL + K G + C GT YL PE
Sbjct: 124 LHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC--GTPEYLAPE 179
Query: 520 YYRNYQLTDKSDVYSYGVVLLELL 543
+ D + GVV+ E++
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMM 203
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 95 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 149 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 201
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 10/194 (5%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
LGSG FG V++ E G V K V NE+ I++Q++H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 413 EAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHR 472
+ + +LI E+++ G L D + + + ++ + + Q E L ++H + I H
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEHS---IVHL 173
Query: 473 DVKSTNILLDDDFNS--KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKS 530
D+K NI+ + S K+ DFGL+ P + T + PE + +
Sbjct: 174 DIKPENIMCETKKASSVKIIDFGLATKLNP--DEIVKVTTATAEFAAPEIVDREPVGFYT 231
Query: 531 DVYSYGVVLLELLT 544
D+++ GV+ LL+
Sbjct: 232 DMWAIGVLGYVLLS 245
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 348 FSKERILGSGGFGEVYKGELQDG-TVVAVKSAKVGNIKS--TQQVLNEVGILSQVNHKNL 404
+ K +G G +G V+K + ++ +VA+K ++ + L E+ +L ++ HKN+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRL--RIALQTAEALAYLH 462
VRL ++ L++E+ L + S N + Q + L + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQD-----LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDPEYY 521
S + HRD+K N+L++ + K+ADFGL+R P + + TL Y P+
Sbjct: 119 SRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVL 173
Query: 522 RNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDD 557
+L S D++S G + EL + + + D DD
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDD 210
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 16/220 (7%)
Query: 336 FHLKELKKATNGFSKE----RILGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQ 388
F+ +EL K + R +GSG +G V Y L+ V S ++ ++
Sbjct: 6 FYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARR 65
Query: 389 VLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYE-YIANGTLHDHLHGKYSSFNLTWSTR 447
E+ +L + H+N++ LL A E Y+ + L+ L+
Sbjct: 66 TYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHV 125
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVST 507
+ Q L Y+HSA I HRD+K +N+ +++D ++ DFGL+R A + T
Sbjct: 126 QFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEM----T 178
Query: 508 CAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQ 546
T Y PE N+ +++ D++S G ++ ELL +
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLR------IALQTAEALAYLHSA 464
A E + L HL G + N+ +L + Q L Y+HSA
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLN-NIVKXQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNY 524
I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N+
Sbjct: 145 D---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNW 197
Query: 525 QLTDKS-DVYSYGVVLLELLTSQ 546
+++ D++S G ++ ELLT +
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 95 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 149 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 201
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 21/236 (8%)
Query: 324 KSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVG-- 381
KS+ + P + + +K+ G R LG GGF + Y E+ D V + KV
Sbjct: 24 KSAPLKEIPDVLVDPRTMKRYMRG----RFLGKGGFAKCY--EITDMDTKEVFAGKVVPK 77
Query: 382 ----NIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY 437
+++ E+ I +++ ++V G + + ++ E +L + LH +
Sbjct: 78 SMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRR 136
Query: 438 SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL-SR 496
+ +T QT + + YLH+ + HRD+K N+ L+DD + K+ DFGL ++
Sbjct: 137 KA--VTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Query: 497 LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFS 552
+ G + C GT Y+ PE + + D++S G +L LL + + S
Sbjct: 192 IEFDGERKKTLC--GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLR------IALQTAEALAYLHSA 464
A E + L HL G + N+ S +L + Q L Y+HSA
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLN-NIVKSQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNY 524
I HRD+K +N+ +++D K+ DFGL R + T T Y PE N+
Sbjct: 145 D---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM----TGYVATRWYRAPEIMLNW 197
Query: 525 QLTDKS-DVYSYGVVLLELLTSQ 546
+++ D++S G ++ ELLT +
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 354 LGSGGFGEVYKGELQDGTV-VAVKSAKVGNIKST-QQVLNEVGILSQVNHKNLVRL---- 407
+G G +G V V VA+K ++ Q+ L E+ IL + H+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
+E + + + ++ L+ L ++ L+ Q L Y+HSA
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ--GTLGYLDPEYYRNYQ 525
+ HRD+K +N+LL+ + K+ DFGL+R+A P H + T Y PE N +
Sbjct: 165 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 526 LTDKS-DVYSYGVVLLELLTSQ 546
KS D++S G +L E+L+++
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 16/224 (7%)
Query: 332 PARIFHLKELKKATNGFSKE----RILGSGGFGEV---YKGELQDGTVVAVKSAKVGNIK 384
P F+ +EL K + R +GSG +G V Y L+ V S ++
Sbjct: 10 PRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLI 69
Query: 385 STQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYE-YIANGTLHDHLHGKYSSFNLT 443
++ E+ +L + H+N++ LL A E Y+ + L+ L+
Sbjct: 70 HARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALS 129
Query: 444 WSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLS 503
+ Q L Y+HSA I HRD+K +N+ +++D ++ DFGL+R A +
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEM- 185
Query: 504 HVSTCAQGTLGYLDPEYYRNYQLTDKS-DVYSYGVVLLELLTSQ 546
T T Y PE N+ +++ D++S G ++ ELL +
Sbjct: 186 ---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 101 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 155 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 207
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGXVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 21/236 (8%)
Query: 324 KSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVG-- 381
KS+ + P + + +K+ G R LG GGF + Y E+ D V + KV
Sbjct: 8 KSAPLKEIPDVLVDPRTMKRYMRG----RFLGKGGFAKCY--EITDMDTKEVFAGKVVPK 61
Query: 382 ----NIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY 437
+++ E+ I +++ ++V G + + ++ E +L + LH +
Sbjct: 62 SMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRR 120
Query: 438 SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL-SR 496
+ +T QT + + YLH+ + HRD+K N+ L+DD + K+ DFGL ++
Sbjct: 121 KA--VTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATK 175
Query: 497 LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFS 552
+ G C GT Y+ PE + + D++S G +L LL + + S
Sbjct: 176 IEFDGERKKDLC--GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 92 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 146 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 198
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 87 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 141 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 193
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 95 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 149 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 201
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 21/236 (8%)
Query: 324 KSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVG-- 381
KS+ + P + + +K+ G R LG GGF + Y E+ D V + KV
Sbjct: 24 KSAPLKEIPDVLVDPRTMKRYMRG----RFLGKGGFAKCY--EITDMDTKEVFAGKVVPK 77
Query: 382 ----NIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY 437
+++ E+ I +++ ++V G + + ++ E +L + LH +
Sbjct: 78 SMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRR 136
Query: 438 SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL-SR 496
+ +T QT + + YLH+ + HRD+K N+ L+DD + K+ DFGL ++
Sbjct: 137 KA--VTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Query: 497 LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFS 552
+ G C GT Y+ PE + + D++S G +L LL + + S
Sbjct: 192 IEFDGERKKDLC--GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 86 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 192
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 88 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 141
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 142 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 194
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 97 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 203
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 21/236 (8%)
Query: 324 KSSNIAGKPARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVG-- 381
KS+ + P + + +K+ G R LG GGF + Y E+ D V + KV
Sbjct: 24 KSAPLKEIPDVLVDPRTMKRYMRG----RFLGKGGFAKCY--EITDMDTKEVFAGKVVPK 77
Query: 382 ----NIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKY 437
+++ E+ I +++ ++V G + + ++ E +L + LH +
Sbjct: 78 SMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRR 136
Query: 438 SSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL-SR 496
+ +T QT + + YLH+ + HRD+K N+ L+DD + K+ DFGL ++
Sbjct: 137 KA--VTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Query: 497 LAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFS 552
+ G C GT Y+ PE + + D++S G +L LL + + S
Sbjct: 192 IEFDGERKKXLC--GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 102 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 156 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 208
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 92 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 146 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 198
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 86 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS 139
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 192
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 86 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 192
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 109 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 163 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 215
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V +++ G +AVK S +I ++ E+ +L + H+N++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
P E + L HL G + N LT + Q L Y+HS
Sbjct: 119 FT----PATSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 172
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 173 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 225
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ + + D++S G ++ ELLT +
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 97 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 151 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATRWYRAPEIMLN 203
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 96 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 150 AD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 202
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 24/202 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVG----NIKSTQQVLNEVGILSQVNHKNLVRLLG 409
+G G +G VYK + G A+K ++ I ST + E+ IL ++ H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPST--TIREISILKELKHSNIVKLYD 67
Query: 410 CCVEAEQPLLIYEYIANG--TLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
++ +L++E++ L D G S T LQ +AY H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCHDRR-- 120
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDPEYY---RN 523
+ HRD+K N+L++ + K+ADFGL+R P + TL Y P+ +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKK 177
Query: 524 YQLTDKSDVYSYGVVLLELLTS 545
Y T D++S G + E++
Sbjct: 178 YSTT--IDIWSVGCIFAEMVNG 197
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 110 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 216
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLR------IALQTAEALAYLHSA 464
A E + L HL G + N+ +L + Q L Y+HSA
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLN-NIVKXQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNY 524
I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N+
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNW 197
Query: 525 QLTDKS-DVYSYGVVLLELLTSQ 546
+++ D++S G ++ ELLT +
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 102 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 156 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 208
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 96 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 150 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 202
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 24/202 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHKNLVRLLG 409
+G G +G VYK + G A+K ++ I ST + E+ IL ++ H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPST--TIREISILKELKHSNIVKLYD 67
Query: 410 CCVEAEQPLLIYEYIANG--TLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
++ +L++E++ L D G S T LQ +AY H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCHDRR-- 120
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDPEYY---RN 523
+ HRD+K N+L++ + K+ADFGL+R P + TL Y P+ +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKK 177
Query: 524 YQLTDKSDVYSYGVVLLELLTS 545
Y T D++S G + E++
Sbjct: 178 YSTT--IDIWSVGCIFAEMVNG 197
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 92 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 146 AD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 198
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 97 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 151 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATRWYRAPEIMLN 203
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 102 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 156 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 208
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 87 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 141 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 193
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 97 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 151 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATRWYRAPEIMLN 203
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 95 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 149 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 201
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 92 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 146 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 198
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 89 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 142
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 143 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 195
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 113 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 167 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 219
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 96 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 150 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 202
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDDDF----NSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPAFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 101 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 155 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 207
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 96 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 150 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 202
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 28/238 (11%)
Query: 319 REDMLKSSNIAGKPARIF-----HLKELKKATNGFSKERILGSGGFGEVY----KGELQD 369
RE++ ++ P HL E+ + + + LGSG +GEV K +
Sbjct: 11 RENLYFQGDLQATPGMFITSKKGHLSEM------YQRVKKLGSGAYGEVLLCRDKVTHVE 64
Query: 370 GTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL 429
+ ++ V + S ++L EV +L ++H N+++L + L+ E G L
Sbjct: 65 RAIKIIRKTSV-STSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL 123
Query: 430 HDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILL---DDDFN 486
D + + FN + I Q + YLH I HRD+K N+LL + D
Sbjct: 124 FDEIIHRMK-FNEVDAAV--IIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDAL 177
Query: 487 SKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
K+ DFGLS + + GT Y+ PE R + +K DV+S GV+L LL
Sbjct: 178 IKIVDFGLSAVFENQKKMKERL--GTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLA 232
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 24/202 (11%)
Query: 354 LGSGGFGEVYKGELQDGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHKNLVRLLG 409
+G G +G VYK + G A+K ++ I ST + E+ IL ++ H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPST--TIREISILKELKHSNIVKLYD 67
Query: 410 CCVEAEQPLLIYEYIANG--TLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
++ +L++E++ L D G S T LQ +AY H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCHDRR-- 120
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDPEYY---RN 523
+ HRD+K N+L++ + K+ADFGL+R P + TL Y P+ +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRAPDVLMGSKK 177
Query: 524 YQLTDKSDVYSYGVVLLELLTS 545
Y T D++S G + E++
Sbjct: 178 YSTT--IDIWSVGCIFAEMVNG 197
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 110 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 216
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 100 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 153
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 154 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 206
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 109 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 163 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 215
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 86 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R ++ T Y PE N
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIMLN 192
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSAG 139
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 140 ---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 195 YKENVDIWSVGCIMGEMV 212
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKST--QQVLNEVGILS 397
ELK + F K LG+G G V+K + +V + IK Q++ E+ +L
Sbjct: 2 ELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+ N +V G + + E++ G+L L + + ++++ +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 116
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
L YL I HRDVK +NIL++ K+ DFG+S + ++ GT Y+
Sbjct: 117 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 171
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELLTSQKAI 549
PE + + +SD++S G+ L+E+ + I
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R ++ T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R ++ T Y PE N
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDDDF----NSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKST--QQVLNEVGILS 397
ELK + F K LG+G G V+K + +V + IK Q++ E+ +L
Sbjct: 64 ELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 121
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+ N +V G + + E++ G+L L + + ++++ +
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 178
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
L YL I HRDVK +NIL++ K+ DFG+S + ++ GT Y+
Sbjct: 179 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 233
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELLTSQKAI 549
PE + + +SD++S G+ L+E+ + I
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKST--QQVLNEVGILS 397
ELK + F K LG+G G V+K + +V + IK Q++ E+ +L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+ N +V G + + E++ G+L L + + ++++ +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 116
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
L YL I HRDVK +NIL++ K+ DFG+S + ++ GT Y+
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 171
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELLTSQKAI 549
PE + + +SD++S G+ L+E+ + I
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 110 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDPEY 520
A I HRD+K +N+ +++D K+ DFGL+R H G T Y PE
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYRAPEI 213
Query: 521 YRNYQLTDKS-DVYSYGVVLLELLTSQ 546
N+ +++ D++S G ++ ELLT +
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKST--QQVLNEVGILS 397
ELK + F K LG+G G V+K + +V + IK Q++ E+ +L
Sbjct: 2 ELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+ N +V G + + E++ G+L L + + ++++ +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 116
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
L YL I HRDVK +NIL++ K+ DFG+S + ++ GT Y+
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 171
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELLTSQKAI 549
PE + + +SD++S G+ L+E+ + I
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKST--QQVLNEVGILS 397
ELK + F K LG+G G V+K + +V + IK Q++ E+ +L
Sbjct: 2 ELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+ N +V G + + E++ G+L L + + ++++ +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 116
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
L YL I HRDVK +NIL++ K+ DFG+S + ++ GT Y+
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 171
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELLTSQKAI 549
PE + + +SD++S G+ L+E+ + I
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKST--QQVLNEVGILS 397
ELK + F K LG+G G V+K + +V + IK Q++ E+ +L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+ N +V G + + E++ G+L L + + ++++ +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 116
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
L YL I HRDVK +NIL++ K+ DFG+S + ++ GT Y+
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 171
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELLTSQKAI 549
PE + + +SD++S G+ L+E+ + I
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ D+GL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 348 FSKERILGSGGFGEVYKGELQDG-TVVAVKSAKVGNIKS--TQQVLNEVGILSQVNHKNL 404
+ K +G G +G V+K + ++ +VA+K ++ + L E+ +L ++ HKN+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 405 VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRL--RIALQTAEALAYLH 462
VRL ++ L++E+ L + S N + Q + L + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQD-----LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR-LAKPGLSHVSTCAQGTLGYLDPEYY 521
S + HRD+K N+L++ + K+A+FGL+R P + + TL Y P+
Sbjct: 119 SRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVL 173
Query: 522 RNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDD 557
+L S D++S G + EL + + + D DD
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 210
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 338 LKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKST--QQVLNEVGI 395
L ELK + F K LG+G G V+K + +V + IK Q++ E+ +
Sbjct: 3 LGELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 396 LSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTA 455
L + N +V G + + E++ G+L L + + ++++
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVI 117
Query: 456 EALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGY 515
+ L YL I HRDVK +NIL++ K+ DFG+S + ++ GT Y
Sbjct: 118 KGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDEMANEFVGTRSY 172
Query: 516 LDPEYYRNYQLTDKSDVYSYGVVLLELLTSQ 546
+ PE + + +SD++S G+ L+E+ +
Sbjct: 173 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 113 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQG---TLGYLDPEY 520
A I HRD+K +N+ +++D K+ DFGL+R H G T Y PE
Sbjct: 167 A---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATRWYRAPEI 216
Query: 521 YRNYQLTDKS-DVYSYGVVLLELLTSQ 546
N+ +++ D++S G ++ ELLT +
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 133
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 134 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 189
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 190 YEPLGLEADMWSIGVITYILLS 211
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 346 NGFSKERILGSGGFGEVYKGELQD-GTVVAVK---SAKVGNIKSTQQVLNEVGILSQVNH 401
+ F R +G G FG+V + D + A+K K + V E+ I+ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
LV L + E ++ + + G L HL + + T + AL YL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ---QNVHFKEETVKLFICELVMALDYL 131
Query: 462 HSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY 521
+ I HRD+K NILLD+ + + DF ++ + P + ++T A GT Y+ PE +
Sbjct: 132 QNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMA-GTKPYMAPEMF 186
Query: 522 RNYQLTDKS---DVYSYGVVLLELLTSQK 547
+ + S D +S GV ELL ++
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 133
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 134 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 189
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 190 YEPLGLEADMWSIGVITYILLS 211
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DFGL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+++ D++S G ++ ELLT +
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL----------SRL 497
L I +Q AEA+ +LHS + HRD+K +NI D KV DFGL +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 498 AKPGLSHVSTCAQ-GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTS 545
P ++ + Q GT Y+ PE + K D++S G++L ELL S
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS 272
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKST--QQVLNEVGILS 397
ELK + F K LG+G G V+K + +V + IK Q++ E+ +L
Sbjct: 29 ELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 86
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+ N +V G + + E++ G+L L + + ++++ +
Sbjct: 87 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 143
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
L YL I HRDVK +NIL++ K+ DFG+S + ++ GT Y+
Sbjct: 144 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 198
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELLTSQKAI 549
PE + + +SD++S G+ L+E+ + I
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 338 LKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVK-------SAKVGNIKST---- 386
+ EL + ++ +R + SG +G V G +G VA+K + NI S
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST 446
++VL E+ +L+ +H N++ L V E+P + Y+ + L +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLA------QVIHDQ 127
Query: 447 RLRIALQTAEALAY-----LHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAK 499
R+ I+ Q + Y LH + HRD+ NILL D+ + + DF L+R A
Sbjct: 128 RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 500 PGLSHVSTCAQGTLGYLDPEYYRNYQ-LTDKSDVYSYGVVLLELLTSQKAI 549
+H T Y PE ++ T D++S G V+ E+ ++KA+
Sbjct: 188 ANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 338 LKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVK-------SAKVGNIKST---- 386
+ EL + ++ +R + SG +G V G +G VA+K + NI S
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST 446
++VL E+ +L+ +H N++ L V E+P + Y+ + L +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLA------QVIHDQ 127
Query: 447 RLRIALQTAEALAY-----LHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR--LAK 499
R+ I+ Q + Y LH + HRD+ NILL D+ + + DF L+R A
Sbjct: 128 RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 500 PGLSHVSTCAQGTLGYLDPEYYRNYQ-LTDKSDVYSYGVVLLELLTSQKAI 549
+H T Y PE ++ T D++S G V+ E+ ++KA+
Sbjct: 188 ANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 353 ILGSGGFGEVYKGELQDGT--VVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKNLVRL 407
+LG G FG+V E + GT + AVK K + V + E +L+ +
Sbjct: 348 VLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 406
Query: 408 LGCCVEAEQPL-LIYEYIANGTLHDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
L C + L + EY+ G L H+ G++ + + A + A L +L S
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-----YAAEIAIGLFFLQSK 461
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL-AKPGLSHVSTCAQGTLGYLDPEYYRN 523
I +RD+K N++LD + + K+ADFG+ + G++ C GT Y+ PE
Sbjct: 462 G---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC--GTPDYIAPEII-A 515
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
YQ KS D +++GV+L E+L Q + D D++ +I
Sbjct: 516 YQPYGKSVDWWAFGVLLYEMLAGQAPFE-GEDEDELFQSI 554
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 42/231 (18%)
Query: 340 ELK-KATNGFSKERILGSGGFGEVYK-GELQDGTVVAVKSAK---VGNIKSTQQVLNEV- 393
E+K + T F + +GSG FG V+K + DG + A+K +K G++ Q L EV
Sbjct: 2 EMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNALREVY 60
Query: 394 --GILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLR-I 450
+L Q H ++VR E + L+ EY G+L D + Y + L+ +
Sbjct: 61 AHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDL 118
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILL--------------DDDFNS-----KVAD 491
LQ L Y+HS + + H D+K +NI + +DD+ S K+ D
Sbjct: 119 LLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD 175
Query: 492 FG-LSRLAKPGLSHVSTCAQGTLGYLDPEYYR-NYQLTDKSDVYSYGVVLL 540
G ++R++ P + +G +L E + NY K+D+++ + ++
Sbjct: 176 LGHVTRISSPQVE------EGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKST------QQVLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K +++ +++ EV IL QV H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E ++ G L D L K S L+ Q + + YLH+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKK- 135
Query: 467 TPIYHRDVKSTNILLDDDF----NSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D + K+ DFGL+ + G+ + GT ++ PE
Sbjct: 136 --IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 192 YEPLGLEADMWSIGVITYILLS 213
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 41/227 (18%)
Query: 343 KATNGFSKERILGSGGFGEVYK-GELQDGTVVAVKSAK---VGNIKSTQQVLNEV---GI 395
+ T F + +GSG FG V+K + DG + A+K +K G++ Q L EV +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNALREVYAHAV 62
Query: 396 LSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLR-IALQT 454
L Q H ++VR E + L+ EY G+L D + Y + L+ + LQ
Sbjct: 63 LGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 120
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILL--------------DDDFNS-----KVADFG-L 494
L Y+HS + + H D+K +NI + +DD+ S K+ D G +
Sbjct: 121 GRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 177
Query: 495 SRLAKPGLSHVSTCAQGTLGYLDPEYYR-NYQLTDKSDVYSYGVVLL 540
+R++ P +G +L E + NY K+D+++ + ++
Sbjct: 178 TRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 218
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 41/227 (18%)
Query: 343 KATNGFSKERILGSGGFGEVYK-GELQDGTVVAVKSAK---VGNIKSTQQVLNEV---GI 395
+ T F + +GSG FG V+K + DG + A+K +K G++ Q L EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNALREVYAHAV 64
Query: 396 LSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLR-IALQT 454
L Q H ++VR E + L+ EY G+L D + Y + L+ + LQ
Sbjct: 65 LGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 122
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILL--------------DDDFNS-----KVADFG-L 494
L Y+HS + + H D+K +NI + +DD+ S K+ D G +
Sbjct: 123 GRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 179
Query: 495 SRLAKPGLSHVSTCAQGTLGYLDPEYYR-NYQLTDKSDVYSYGVVLL 540
+R++ P + +G +L E + NY K+D+++ + ++
Sbjct: 180 TRISSPQVE------EGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 41/227 (18%)
Query: 343 KATNGFSKERILGSGGFGEVYK-GELQDGTVVAVKSAK---VGNIKSTQQVLNEV---GI 395
+ T F + +GSG FG V+K + DG + A+K +K G++ Q L EV +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNALREVYAHAV 66
Query: 396 LSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLR-IALQT 454
L Q H ++VR E + L+ EY G+L D + Y + L+ + LQ
Sbjct: 67 LGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 124
Query: 455 AEALAYLHSAAYTPIYHRDVKSTNILL--------------DDDFNS-----KVADFG-L 494
L Y+HS + + H D+K +NI + +DD+ S K+ D G +
Sbjct: 125 GRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 181
Query: 495 SRLAKPGLSHVSTCAQGTLGYLDPEYYR-NYQLTDKSDVYSYGVVLL 540
+R++ P +G +L E + NY K+D+++ + ++
Sbjct: 182 TRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGN--IKSTQQVLNEVGILSQVNHKNLV 405
++ E +G G +GEV K +Q GT + + K+ ++ + E+ I+ ++H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
RL + L+ E G L + + K S RI A+AY H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHKLN 126
Query: 466 YTPIYHRDVKSTNIL-LDDDFNS--KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
+ HRD+K N L L D +S K+ DFGL+ KPG + GT Y+ P+
Sbjct: 127 ---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKVGTPYYVSPQVLE 181
Query: 523 NYQLTDKSDVYSYGVVLLELL 543
+ D +S GV++ LL
Sbjct: 182 GL-YGPECDEWSAGVMMYVLL 201
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 336 FHLKELKKATNGFSKERILGSGGFGEVYK-GELQDGTVVAVK--SAKVGNIKSTQQVLNE 392
F + K ++ + + LG G F V + G A K + K + + Q++ E
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 393 VGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK--YSSFNLTWSTRLRI 450
I ++ H N+VRL E L+++ + G L + + + YS + + +
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ--- 135
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNS---KVADFGLSRLAKPGLSHVST 507
Q E++AY HS I HR++K N+LL K+ADFGL+ + S
Sbjct: 136 --QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH 188
Query: 508 CAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
GT GYL PE + + D+++ GV+L LL
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 15/219 (6%)
Query: 333 ARIFHLKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKST--QQVL 390
A++ LK+ + F + LG+G G V K + + ++ + IK Q++
Sbjct: 8 AKVGELKD-----DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQII 62
Query: 391 NEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI 450
E+ +L + N +V G + + E++ G+L L + + ++
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---EAKRIPEEILGKV 119
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
++ LAYL I HRDVK +NIL++ K+ DFG+S + ++
Sbjct: 120 SIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFV 174
Query: 511 GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAI 549
GT Y+ PE + + +SD++S G+ L+EL + I
Sbjct: 175 GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 343 KATNGFSKERILGSGGFGEVYK-GELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQV 399
K ++ + + LG G F V + G A K + K + + Q++ E I ++
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK--YSSFNLTWSTRLRIALQTAEA 457
H N+VRL E L+++ + G L + + + YS + + + Q E+
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-----QILES 116
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNS---KVADFGLSRLAKPGLSHVSTCAQGTLG 514
+AY HS I HR++K N+LL K+ADFGL+ + S GT G
Sbjct: 117 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPG 171
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
YL PE + + D+++ GV+L LL
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLV 201
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 343 KATNGFSKERILGSGGFGEVYK-GELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQV 399
K ++ + + LG G F V + G A K + K + + Q++ E I ++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK--YSSFNLTWSTRLRIALQTAEA 457
H N+VRL E L+++ + G L + + + YS + + + Q E+
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-----QILES 117
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNS---KVADFGLSRLAKPGLSHVSTCAQGTLG 514
+AY HS I HR++K N+LL K+ADFGL+ + S GT G
Sbjct: 118 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPG 172
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
YL PE + + D+++ GV+L LL
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLV 202
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 338 LKELKKATNGFSKERILGSGGFGEV----YKGELQDGTVVAVKS-AKVGNIKSTQQVL-- 390
++ L+ + +++G G FGEV +K + V A+K +K IK +
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQK---VYAMKLLSKFEMIKRSDSAFFW 123
Query: 391 NEVGILSQVNHKNLVRLLGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNL--TWSTR 447
E I++ N +V+L C + ++ L ++ EY+ G L + + S++++ W+
Sbjct: 124 EERDIMAFANSPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLM----SNYDVPEKWAK- 177
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVS 506
TAE + L + + HRDVK N+LLD + K+ADFG ++ + G+ H
Sbjct: 178 ----FYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD 233
Query: 507 TCAQGTLGYLDPEYYRNYQLTD-----KSDVYSYGVVLLELLTSQ 546
T A GT Y+ PE ++ Q D + D +S GV L E+L
Sbjct: 234 T-AVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLFEMLVGD 276
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 93 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 147
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 148 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 203 YKENVDIWSVGCIMGEMI 220
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 88/206 (42%), Gaps = 27/206 (13%)
Query: 348 FSKERILGSGGFGEVYK-GELQDGTVVAVKSA--KVGNIKSTQQVLNEVGILSQVNHKNL 404
F + LG G +GEV+K +DG + AVK + K + L EVG +V
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP- 117
Query: 405 VRLLGCCVEAEQP------LLIYEYIANGTLHDHLHGKYSSF--NLTWSTRLRIALQTAE 456
CCV EQ L + + +L H +S W LR T
Sbjct: 118 -----CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGY-LR---DTLL 168
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYL 516
ALA+LHS + H DVK NI L K+ DFGL L + G + +G Y+
Sbjct: 169 ALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYM 223
Query: 517 DPEYYRNYQLTDKSDVYSYGVVLLEL 542
PE + T +DV+S G+ +LE+
Sbjct: 224 APELLQGSYGT-AADVFSLGLTILEV 248
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQ------VLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K KS+++ + EV IL ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E +A G L D L K S LT Q + YLHS
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQ- 134
Query: 467 TPIYHRDVKSTNILLDDDF----NSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D K+ DFGL+ K + GT ++ PE
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 37/213 (17%)
Query: 352 RILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+++G+G FG V++ +L + VA+K KV K + E+ I+ V H N+V L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIK--KVLQDKRFKN--RELQIMRIVKHPNVVDLKAFF 101
Query: 412 V-----EAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIAL---QTAEALAYLH 462
+ E L L+ EY+ H Y+ T L I L Q +LAY+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRH--YAKLKQTMPM-LLIKLYMYQLLRSLAYIH 158
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVST-CAQGTLGYLDPEY 520
S I HRD+K N+LLD K+ DFG +++ G +VS C++ Y
Sbjct: 159 SIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR---------Y 206
Query: 521 YRNYQL-------TDKSDVYSYGVVLLELLTSQ 546
YR +L T D++S G V+ EL+ Q
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIK------STQQVLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K + S +++ EV IL QV H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E ++ G L D L K S L+ Q + + YLH+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKK- 135
Query: 467 TPIYHRDVKSTNILLDDDF----NSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D + K+ DFGL+ + G+ + GT ++ PE
Sbjct: 136 --IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 192 YEPLGLEADMWSIGVITYILLS 213
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 348 FSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGN--IKSTQQVLNEVGILSQVNHKNLV 405
++ E +G G +GEV K +Q GT + + K+ ++ + E+ I+ ++H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
RL + L+ E G L + + K S RI A+AY H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHKLN 143
Query: 466 YTPIYHRDVKSTNIL-LDDDFNS--KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
+ HRD+K N L L D +S K+ DFGL+ KPG + GT Y+ P+
Sbjct: 144 ---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKVGTPYYVSPQVLE 198
Query: 523 NYQLTDKSDVYSYGVVLLELL 543
+ D +S GV++ LL
Sbjct: 199 GL-YGPECDEWSAGVMMYVLL 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ FGL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEV----YKGELQDGTVVAVKSAKVGNIK---STQQVLNEVGILSQVNHKNLVR 406
LGSG F V KG ++ +K ++ + + S +++ EV IL ++ H N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E ++ G L D L K S LT + Q + + YLHS
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSKR- 128
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D + K+ DFG++ + G + GT ++ PE
Sbjct: 129 --IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--GTPEFVAPEIVN 184
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 185 YEPLGLEADMWSIGVITYILLS 206
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 340 ELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKSAKVGNIKST--QQVLNEVGILS 397
ELK + F K LG+G G V+K + +V + IK Q++ E+ +L
Sbjct: 21 ELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 78
Query: 398 QVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+ N +V G + + E++ G+L L + + ++++ +
Sbjct: 79 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 135
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
L YL I HRDVK +NIL++ K+ DFG+S + ++ GT Y+
Sbjct: 136 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 190
Query: 518 PEYYRNYQLTDKSDVYSYGVVLLELLTSQKAI 549
PE + + +SD++S G+ L+E+ + I
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIK------STQQVLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K + S +++ EV IL QV H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E ++ G L D L K S L+ Q + + YLH+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKK- 135
Query: 467 TPIYHRDVKSTNILLDDDF----NSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D + K+ DFGL+ + G+ + GT ++ PE
Sbjct: 136 --IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 192 YEPLGLEADMWSIGVITYILLS 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIK------STQQVLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K + S +++ EV IL QV H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E ++ G L D L K S L+ Q + + YLH+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKK- 135
Query: 467 TPIYHRDVKSTNILLDDDF----NSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D + K+ DFGL+ + G+ + GT ++ PE
Sbjct: 136 --IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 192 YEPLGLEADMWSIGVITYILLS 213
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEV----YKGELQDGTVVAVKSAKVGNIK---STQQVLNEVGILSQVNHKNLVR 406
LGSG F V KG ++ +K ++ + + S +++ EV IL ++ H N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E ++ G L D L K S LT + Q + + YLHS
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSKR- 135
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D + K+ DFG++ + G + GT ++ PE
Sbjct: 136 --IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--GTPEFVAPEIVN 191
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 192 YEPLGLEADMWSIGVITYILLS 213
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 343 KATNGFSKERILGSGGFGEVYK-GELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQV 399
K ++ + + LG G F V + G A K + K + + Q++ E I ++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK--YSSFNLTWSTRLRIALQTAEA 457
H N+VRL E L+++ + G L + + + YS + + + Q E+
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-----QILES 117
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNS---KVADFGLSRLAKPGLSHVSTCAQGTLG 514
+AY HS I HR++K N+LL K+ADFGL+ + S GT G
Sbjct: 118 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPG 172
Query: 515 YLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
YL PE + + D+++ GV+L LL
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLV 202
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 353 ILGSGGFGEVYKGELQDGT--VVAVKSAKVGNIKSTQQV---LNEVGILSQVNHKNLVRL 407
+LG G FG+V E + GT + AVK K + V + E +L+ +
Sbjct: 27 VLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 85
Query: 408 LGCCVEAEQPL-LIYEYIANGTLHDHLH--GKYSSFNLTWSTRLRIALQTAEALAYLHSA 464
L C + L + EY+ G L H+ G++ + + A + A L +L S
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-----YAAEIAIGLFFLQSK 140
Query: 465 AYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL-AKPGLSHVSTCAQGTLGYLDPEYYRN 523
I +RD+K N++LD + + K+ADFG+ + G++ C GT Y+ PE
Sbjct: 141 G---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC--GTPDYIAPEIIA- 194
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
YQ KS D +++GV+L E+L Q + D D++ +I
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAPFE-GEDEDELFQSI 233
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIK------STQQVLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K + S +++ EV IL QV H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E ++ G L D L K S L+ Q + + YLH+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKK- 135
Query: 467 TPIYHRDVKSTNILLDDDF----NSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D + K+ DFGL+ + G+ + GT ++ PE
Sbjct: 136 --IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 192 YEPLGLEADMWSIGVITYILLS 213
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 97 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 151
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 152 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 206
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 207 YKENVDLWSVGCIMGEMV 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 86 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 140
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 141 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 196 YKENVDLWSVGCIMGEMV 213
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 15/211 (7%)
Query: 345 TNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAK-VGNIKSTQQVLNEVGILSQVNHK 402
++ F + +LG G +G V + G +VA+K + + L E+ IL H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH 462
N++ + YI + LH S+ L+ QT A+ LH
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL---SHVSTCAQGTLGYLDPE 519
+ + HRD+K +N+L++ + + KV DFGL+R+ S + G Y+
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATR 186
Query: 520 YYRNYQLTDKS-------DVYSYGVVLLELL 543
+YR ++ S DV+S G +L EL
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ D GL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 91 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 145
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 146 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 200
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 201 YKENVDIWSVGCIMGEMV 218
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ DF L+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 147
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 148 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 203 YKENVDIWSVGCIMGEMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVKSAKVGNIK------STQQVLNEVGILSQVNHKNLVR 406
LGSG F V K E G A K K + S +++ EV IL QV H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E ++ G L D L K S L+ Q + + YLH+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKK- 135
Query: 467 TPIYHRDVKSTNILLDDDF----NSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D + K+ DFGL+ + G+ + GT ++ PE
Sbjct: 136 --IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 523 NYQLTDKSDVYSYGVVLLELLT 544
L ++D++S GV+ LL+
Sbjct: 192 YEPLGLEADMWSIGVITYILLS 213
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 140
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 141 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 196 YKENVDIWSVGCIMGEMV 213
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ D GL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 147
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 148 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 203 YKENVDIWSVGCIMGEMV 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 139
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 140 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 195 YKENVDIWSVGCIMGEMV 212
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 354 LGSGGFGEV----YKGELQDGTVVAVKSAKVGNIK---STQQVLNEVGILSQVNHKNLVR 406
LGSG F V KG ++ +K ++ + + S +++ EV IL ++ H N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
L +LI E ++ G L D L K S LT + Q + + YLHS
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSKR- 149
Query: 467 TPIYHRDVKSTNILLDD----DFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
I H D+K NI+L D + K+ DFG++ + G + GT ++ PE
Sbjct: 150 --IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--GTPEFVAPEIVN 205
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
L ++D++S GV+ LL+
Sbjct: 206 YEPLGLEADMWSIGVITYILLSG 228
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 345 TNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAK-VGNIKSTQQVLNEVGILSQVNHK 402
++ F + +LG G +G V + G +VA+K + + L E+ IL H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH 462
N++ + YI + LH S+ L+ QT A+ LH
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGL---SHVSTCAQGTLGYLDPE 519
+ + HRD+K +N+L++ + + KV DFGL+R+ S + G + ++
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR 186
Query: 520 YYRNYQLTDKS-------DVYSYGVVLLELL 543
+YR ++ S DV+S G +L EL
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 184
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 185 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 240 YKENVDIWSVGCIMGEMV 257
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 140
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 141 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 196 YKENVDIWSVGCIMGEMV 213
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L + S N ++ E+ ++ VNHKN++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + + + + L + + +++ + Q + +LHSA
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 184
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T T Y PE
Sbjct: 185 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 240 YKENVDIWSVGCIMGEMV 257
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 353 ILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKS-----TQQVLNEVGILSQVNHKNLVR 406
++G G F V + + G AVK V S T+ + E I + H ++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 407 LLGCCVEAEQPLLIYEYIANGTL-HDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LL +++E++ L + + + F + + Q EAL Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD-- 148
Query: 466 YTPIYHRDVKSTNILLDDDFNS---KVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYY 521
I HRDVK N+LL NS K+ DFG++ +L + GL V+ GT ++ PE
Sbjct: 149 -NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL--VAGGRVGTPHFMAPEVV 205
Query: 522 RNYQLTDKSDVYSYGVVLLELLTS 545
+ DV+ GV+L LL+
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSG 229
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 387 QQVLNEVGILSQVNHKNLVRLLGCCVEAEQP--LLIYEYIANGTLHDHLHGKYSSFNLTW 444
+QV E+ IL +++H N+V+L+ + + +++E + G + + +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-----VPTLKPLS 135
Query: 445 STRLRIALQT-AEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLS 503
+ R Q + + YLH Y I HRD+K +N+L+ +D + K+ADFG+S K G
Sbjct: 136 EDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK-GSD 191
Query: 504 HVSTCAQGTLGYLDPEYYRNYQ--LTDKS-DVYSYGVVL 539
+ + GT ++ PE + + K+ DV++ GV L
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VAVK S +I ++ E+ +L + H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFN-------LTWSTRLRIALQTAEALAYLHS 463
A E + L HL G + N LT + Q L Y+HS
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 464 AAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRN 523
A I HRD+K +N+ +++D K+ D GL+R + T T Y PE N
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM----TGYVATRWYRAPEIMLN 196
Query: 524 YQLTDKS-DVYSYGVVLLELLTSQ 546
+ +++ D++S G ++ ELLT +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
LG G F V + ++ G A K + K + + Q++ E I + H N+VRL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGK--YSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
E LI++ + G L + + + YS + + + Q EA+ + H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ-----QILEAVLHCHQMG--- 141
Query: 469 IYHRDVKSTNILLDDDFNS---KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+K N+LL K+ADFGL+ + G GT GYL PE R
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 526 LTDKSDVYSYGVVLLELLTS 545
D+++ GV+L LL
Sbjct: 201 YGKPVDLWACGVILYILLVG 220
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 94 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 148
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T Y PE
Sbjct: 149 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRYYRAPEVILGMG 203
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 204 YKENVDIWSVGCIMGEMI 221
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 324 KSSNIAGKPAR----IFHLKELKKATNGFSKERILGSGGFGEV----YKGELQDGTVVAV 375
K+ NI +R I +++L+ + +++G G FGEV +K + V A+
Sbjct: 48 KNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK---VYAM 104
Query: 376 KS-AKVGNIKSTQQVL--NEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDH 432
K +K IK + E I++ N +V+L + ++ EY+ G L +
Sbjct: 105 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL 164
Query: 433 LHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADF 492
+ S++++ + AL +HS + HRDVK N+LLD + K+ADF
Sbjct: 165 M----SNYDVPEKWARFYTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADF 217
Query: 493 GL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD-----KSDVYSYGVVLLELLTSQ 546
G ++ K G+ T A GT Y+ PE ++ Q D + D +S GV L E+L
Sbjct: 218 GTCMKMNKEGMVRCDT-AVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEV----YKGELQDGTVVAVKS-AKVGNIKSTQQV 389
I +++L+ + +++G G FGEV +K + V A+K +K IK +
Sbjct: 58 INKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK---VYAMKLLSKFEMIKRSDSA 114
Query: 390 L--NEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTR 447
E I++ N +V+L + ++ EY+ G L + + S++++
Sbjct: 115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKWA 170
Query: 448 LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVS 506
+ AL +HS + HRDVK N+LLD + K+ADFG ++ K G+
Sbjct: 171 RFYTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 227
Query: 507 TCAQGTLGYLDPEYYRNYQLTD-----KSDVYSYGVVLLELLTSQ 546
T A GT Y+ PE ++ Q D + D +S GV L E+L
Sbjct: 228 T-AVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLVGD 270
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 324 KSSNIAGKPAR----IFHLKELKKATNGFSKERILGSGGFGEV----YKGELQDGTVVAV 375
K+ NI +R I +++L+ + +++G G FGEV +K + V A+
Sbjct: 48 KNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK---VYAM 104
Query: 376 KS-AKVGNIKSTQQVL--NEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDH 432
K +K IK + E I++ N +V+L + ++ EY+ G L +
Sbjct: 105 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL 164
Query: 433 LHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADF 492
+ S++++ + AL +HS + HRDVK N+LLD + K+ADF
Sbjct: 165 M----SNYDVPEKWARFYTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADF 217
Query: 493 GL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD-----KSDVYSYGVVLLELLTSQ 546
G ++ K G+ T A GT Y+ PE ++ Q D + D +S GV L E+L
Sbjct: 218 GTCMKMNKEGMVRCDT-AVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 17/216 (7%)
Query: 354 LGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+G+G FG + Q +VAVK + G K + V E+ + H N+VR +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGE-KIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 413 EAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
++ EY + G L + + G++S + + Q ++Y H+ +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-----QLISGVSYAHAMQ---VA 137
Query: 471 HRDVKSTNILLDDDFNS--KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD 528
HRD+K N LLD K+ADFG S+ + L A GT Y+ PE +
Sbjct: 138 HRDLKLENTLLDGSPAPRLKIADFGYSKASV--LHSQPKSAVGTPAYIAPEVLLKKEYDG 195
Query: 529 K-SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIY 563
K +DV+S GV L +L + +P + I+
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 39/214 (18%)
Query: 354 LGSGGFGEVY----KGELQDGTVVAVKSAKVGN---IKSTQ--QVLNEVGILSQVNHKNL 404
LGSG FG V+ K + ++ V +K KV I+ + +V E+ ILS+V H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 405 VRLLGCCVEAEQPLLIYEYIANG-------TLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
+++L L+ E +G H L +S+ I Q A
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY---------IFRQLVSA 142
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLD 517
+ YL I HRD+K NI++ +DF K+ DFG + + G + C GT+ Y
Sbjct: 143 VGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC--GTIEYCA 197
Query: 518 PEY-----YRNYQLTDKSDVYSYGVVLLELLTSQ 546
PE YR +L +++S GV L L+ +
Sbjct: 198 PEVLMGNPYRGPEL----EMWSLGVTLYTLVFEE 227
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 354 LGSGGFGEV---YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG G V Y L+ + S N ++ E+ ++ VNHKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 411 -----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
+E Q + I + + L + + +++ + Q + +LHSA
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K +NI++ D K+ DFGL+R A G S + T Y PE
Sbjct: 147 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 526 LTDKSDVYSYGVVLLELL 543
+ D++S G ++ E++
Sbjct: 202 YKENVDLWSVGCIMGEMV 219
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 40/225 (17%)
Query: 353 ILGSGGFGEVYKG-ELQDGTVVAVKS--AKVGNIKSTQQVLNEVGILSQVNHKNLVRLLG 409
++G+G +G V + + + VVA+K ++ +++L E+ IL+++NH ++V++L
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 410 CC----VEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
VE L + IA+ L T L L + Y+HSA
Sbjct: 120 IVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLV---GVKYVHSAG 176
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAK--------------------PGLSHV 505
I HRD+K N L++ D + KV DFGL+R H
Sbjct: 177 ---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT 233
Query: 506 STCAQGTLGYLDPEYYRNYQL-------TDKSDVYSYGVVLLELL 543
+ G++ +YR +L T+ DV+S G + ELL
Sbjct: 234 KNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 21/202 (10%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VA+K S + ++ E+ +L + H+N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 411 CVEAEQPLLIYEY-----IANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
A Y++ L + K+S + + + Q + L Y+HSA
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHSAG 146
Query: 466 YTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+K N+ +++D K+ DFGL+R A ++ T Y PE ++
Sbjct: 147 ---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYRAPEVILSWM 199
Query: 526 LTDKS-DVYSYGVVLLELLTSQ 546
+++ D++S G ++ E+LT +
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 354 LGSGGFGEVYKGELQD-GTVVAVKSAK-VGNIKSTQQVLNEVGI-LSQVNHKNLVRLLGC 410
+GSG G+V+K + G V+AVK + GN + +++L ++ + L + +V+ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
+ + E + GT + L + + ++ + +AL YL +
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQG-PIPERILGKMTVAIVKALYYLKEKH--GVI 147
Query: 471 HRDVKSTNILLDDDFNSKVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD- 528
HRDVK +NILLD+ K+ DFG+S RL S G Y+ PE T
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---GCAAYMAPERIDPPDPTKP 204
Query: 529 ----KSDVYSYGVVLLELLTSQ 546
++DV+S G+ L+EL T Q
Sbjct: 205 DYDIRADVWSLGISLVELATGQ 226
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 350 KERILGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLL 408
K++ LG G F K + AVK +TQ+ + + + H N+V+L
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCE--GHPNIVKLH 72
Query: 409 GCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
+ L+ E + G L + + K F+ T ++ I + A++++H
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKK-KHFSETEASY--IMRKLVSAVSHMHDVG--- 126
Query: 469 IYHRDVKSTNILL---DDDFNSKVADFGLSRLAKPGLSHVST-CAQGTLGYLDPEYYRNY 524
+ HRD+K N+L +D+ K+ DFG +RL P + T C TL Y PE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQN 184
Query: 525 QLTDKSDVYSYGVVLLELLTSQ 546
+ D++S GV+L +L+ Q
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQ 206
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VA+K S + ++ E+ +L + H+N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 411 CVEAEQPLLIYE-YIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPI 469
A Y+ Y+ + L K + + Q + L Y+HSA +
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQ-KIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---V 165
Query: 470 YHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTDK 529
HRD+K N+ +++D K+ DFGL+R A ++ T Y PE ++ ++
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYRAPEVILSWMHYNQ 221
Query: 530 S-DVYSYGVVLLELLTSQ 546
+ D++S G ++ E+LT +
Sbjct: 222 TVDIWSVGCIMAEMLTGK 239
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+ + + +GSG G V + G VAVK S N ++ E+ +L VNHKN+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 405 VRLLGC-----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALA 459
+ LL +E Q + + + + L +H + +++ + Q +
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSY-----LLYQMLCGIK 138
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+LHSA I HRD+K +NI++ D K+ DFGL+R A + T T Y PE
Sbjct: 139 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNF--MMTPYVVTRYYRAPE 193
Query: 520 YYRNYQLTDKSDVYSYGVVLLELL 543
+ D++S G ++ EL+
Sbjct: 194 VILGMGYKENVDIWSVGCIMGELV 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 354 LGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHKNLVRLL 408
+G+G +G V + G VA+K K+ N + + ++ L E+ IL H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIK--KIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 409 GCCVEAEQPLLIYE-----YIANGTLHDHLHGK-YSSFNLTWSTRLRIALQTAEALAYLH 462
+P + Y Y+ + LH +SS LT Q L Y+H
Sbjct: 121 DIL----RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 176
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR---LAKPGLSHVSTCAQGTLGYLDPE 519
SA + HRD+K +N+L++++ K+ DFG++R + + T T Y PE
Sbjct: 177 SAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 520 YYRN-YQLTDKSDVYSYGVVLLELLTSQK 547
+ ++ T D++S G + E+L ++
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 345 TNGFSKERILGSGGFGEVYKGELQ-DGTVVAVKSAK-VGNIKSTQQVLNEVGILSQVNHK 402
++ F + +LG G +G V + G +VA+K + + L E+ IL H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 403 NLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLH 462
N++ + YI + LH S+ L+ QT A+ LH
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRL--------AKP-GLSHVSTCAQGTL 513
+ + HRD+K +N+L++ + + KV DFGL+R+ ++P G T T
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATR 186
Query: 514 GYLDPE-YYRNYQLTDKSDVYSYGVVLLELL 543
Y PE + + + DV+S G +L EL
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 345 TNGFSKERILGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNH 401
T+ + +G G F V + +L G A K + K + + Q++ E I + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK--YSSFNLTWSTRLRIALQTAEALA 459
N+VRL E L+++ + G L + + + YS + + + Q EA+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-----QILEAVL 117
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNS---KVADFGLSRLAKPGLSHVSTCAQGTLGYL 516
+ H + HRD+K N+LL K+ADFGL+ + G GT GYL
Sbjct: 118 HCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 517 DPEYYRNYQLTDKSDVYSYGVVLLELLTS 545
PE R D+++ GV+L LL
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 354 LGSGGFG------EVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRL 407
LG G F +V G+ ++ K + + Q++ E I + H N+VRL
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKL---SARDHQKLEREARICRLLKHPNIVRL 75
Query: 408 LGCCVEAEQPLLIYEYIANGTLHDHLHGK--YSSFNLTWSTRLRIALQTAEALAYLHSAA 465
E LI++ + G L + + + YS + + + Q EA+ + H
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ-----QILEAVLHCHQMG 130
Query: 466 YTPIYHRDVKSTNILLDDDFNS---KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYR 522
+ HR++K N+LL K+ADFGL+ + G GT GYL PE R
Sbjct: 131 ---VVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 523 NYQLTDKSDVYSYGVVLLELLTS 545
D+++ GV+L LL
Sbjct: 187 KDPYGKPVDLWACGVILYILLVG 209
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 354 LGSGGFGEVYKGELQ-DGTVVAVKSAKVGN----IKSTQQVLNEVGILSQVNHKNLVRLL 408
+G+G +G V + G VA+K K+ N + + ++ L E+ IL H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIK--KIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 409 GCCVEAEQPLLIYE-----YIANGTLHDHLHGK-YSSFNLTWSTRLRIALQTAEALAYLH 462
+P + Y Y+ + LH +SS LT Q L Y+H
Sbjct: 120 DIL----RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 463 SAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR---LAKPGLSHVSTCAQGTLGYLDPE 519
SA + HRD+K +N+L++++ K+ DFG++R + + T T Y PE
Sbjct: 176 SAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 520 YYRN-YQLTDKSDVYSYGVVLLELLTSQK 547
+ ++ T D++S G + E+L ++
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 352 RILGSGGFGEVYKGELQDGT-------VVAVKSAKVGNIKSTQQVLN---EVGILSQVNH 401
+ LGSG GEV K + T +++ + +G+ + LN E+ IL ++NH
Sbjct: 16 KTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++++ +AE ++ E + G L D + G L +T Q A+ YL
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYL 130
Query: 462 HSAAYTPIYHRDVKSTNILL---DDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDP 518
H I HRD+K N+LL ++D K+ DFG S++ G + + GT YL P
Sbjct: 131 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAP 185
Query: 519 EYYRNYQLTDKS---DVYSYGVVLL 540
E + + D +S GV+L
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 36/230 (15%)
Query: 337 HLKELKKATNGFSKERILGSGGFGEVYKGELQDGTVVAVKS------------AKVGN-- 382
++KE K N + R L G F ++ E +D A+K K N
Sbjct: 22 YVKEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDK 80
Query: 383 --IKST-QQVLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSS 439
IKS NE+ I++ + ++ + G ++ +IYEY+ N ++ L
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI---LKFDEYF 137
Query: 440 FNLTWSTRLRIALQTAE--------ALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVAD 491
F L + I +Q + + +Y+H+ I HRDVK +NIL+D + K++D
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSD 195
Query: 492 FGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD--KSDVYSYGVVL 539
FG S + ++GT ++ PE++ N + K D++S G+ L
Sbjct: 196 FGESEYM---VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 353 ILGSGGFGEVYKGELQD-GTVVAVKS-AKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
ILG G V++G + G + A+K + ++ + E +L ++NHKN+V+L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 411 CVE--AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
E +LI E+ G+L+ L +++ L S L + + +L
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 469 IYHRDVKSTNIL--LDDDFNS--KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNY 524
I HR++K NI+ + +D S K+ DFG +R + VS GT YL P+ Y
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY--GTEEYLHPDMYERA 190
Query: 525 QLTDKS--------DVYSYGVVLLELLTS 545
L D++S GV T
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 352 RILGSGGFGEVYKGELQDGT-------VVAVKSAKVGNIKSTQQVLN---EVGILSQVNH 401
+ LGSG GEV K + T +++ + +G+ + LN E+ IL ++NH
Sbjct: 16 KTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++++ +AE ++ E + G L D + G L +T Q A+ YL
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYL 130
Query: 462 HSAAYTPIYHRDVKSTNILL---DDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDP 518
H I HRD+K N+LL ++D K+ DFG S++ G + + GT YL P
Sbjct: 131 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAP 185
Query: 519 EYYRNYQLTDKS---DVYSYGVVLL 540
E + + D +S GV+L
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 352 RILGSGGFGEVYKGELQDGT-------VVAVKSAKVGNIKSTQQVLN---EVGILSQVNH 401
+ LGSG GEV K + T +++ + +G+ + LN E+ IL ++NH
Sbjct: 15 KTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++++ +AE ++ E + G L D + G + L +T Q A+ YL
Sbjct: 74 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYL 129
Query: 462 HSAAYTPIYHRDVKSTNILL---DDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDP 518
H I HRD+K N+LL ++D K+ DFG S++ G + + GT YL P
Sbjct: 130 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAP 184
Query: 519 EYYRNYQLTDKS---DVYSYGVVLL 540
E + + D +S GV+L
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 352 RILGSGGFGEVYKGELQDGT-------VVAVKSAKVGNIKSTQQVLN---EVGILSQVNH 401
+ LGSG GEV K + T +++ + +G+ + LN E+ IL ++NH
Sbjct: 22 KTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++++ +AE ++ E + G L D + G L +T Q A+ YL
Sbjct: 81 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYL 136
Query: 462 HSAAYTPIYHRDVKSTNILL---DDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDP 518
H I HRD+K N+LL ++D K+ DFG S++ G + + GT YL P
Sbjct: 137 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAP 191
Query: 519 EYYRNYQLTDKS---DVYSYGVVLL 540
E + + D +S GV+L
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 352 RILGSGGFGEVYKGELQDGT-------VVAVKSAKVGNIKSTQQVLN---EVGILSQVNH 401
+ LGSG GEV K + T +++ + +G+ + LN E+ IL ++NH
Sbjct: 16 KTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++++ +AE ++ E + G L D + G + L +T Q A+ YL
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYL 130
Query: 462 HSAAYTPIYHRDVKSTNILL---DDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDP 518
H I HRD+K N+LL ++D K+ DFG S++ G + + GT YL P
Sbjct: 131 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAP 185
Query: 519 EYYRNYQLTDKS---DVYSYGVVLL 540
E + + D +S GV+L
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 352 RILGSGGFGEVYKGELQDGT-------VVAVKSAKVGNIKSTQQVLN---EVGILSQVNH 401
+ LGSG GEV K + T +++ + +G+ + LN E+ IL ++NH
Sbjct: 141 KTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++++ +AE ++ E + G L D + G L +T Q A+ YL
Sbjct: 200 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYL 255
Query: 462 HSAAYTPIYHRDVKSTNILL---DDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDP 518
H I HRD+K N+LL ++D K+ DFG S++ G + + GT YL P
Sbjct: 256 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAP 310
Query: 519 EYYRNYQLTDKS---DVYSYGVVLL 540
E + + D +S GV+L
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 343 KATNGFSKERILGSGGFGEVY----KGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQ 398
+ T+ + LG G F V K Q+ + + K+ + + Q++ E I
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL-SARDHQKLEREARICRL 86
Query: 399 VNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK--YSSFNLTWSTRLRIALQTAE 456
+ H N+VRL E L+++ + G L + + + YS + + Q E
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH-----QILE 141
Query: 457 ALAYLHSAAYTPIYHRDVKSTNILLDDDFNS---KVADFGLSRLAKPGLSHVSTCAQGTL 513
++ ++H I HRD+K N+LL K+ADFGL+ + G GT
Sbjct: 142 SVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTP 197
Query: 514 GYLDPEYYRNYQLTDKSDVYSYGVVLLELLTS 545
GYL PE R D+++ GV+L LL
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 348 FSKERILGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNL 404
+ + + +GSG G V + G VAVK S N ++ E+ +L VNHKN+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 405 VRLLGC-----CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALA 459
+ LL +E Q + + + + L +H + +++ + Q +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSY-----LLYQMLCGIK 140
Query: 460 YLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
+LHSA I HRD+K +NI++ D K+ DFGL+R A + + T T Y PE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVVTRYYRAPE 195
Query: 520 YYRNYQLTDKSDVYSYGVVLLELL 543
D++S G ++ EL+
Sbjct: 196 VILGMGYAANVDIWSVGCIMGELV 219
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 352 RILGSGGFGEVYKGELQDGT-------VVAVKSAKVGNIKSTQQVLN---EVGILSQVNH 401
+ LGSG GEV K + T +++ + +G+ + LN E+ IL ++NH
Sbjct: 155 KTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 402 KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYL 461
++++ +AE ++ E + G L D + G L +T Q A+ YL
Sbjct: 214 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYL 269
Query: 462 HSAAYTPIYHRDVKSTNILL---DDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDP 518
H I HRD+K N+LL ++D K+ DFG S++ G + + GT YL P
Sbjct: 270 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAP 324
Query: 519 EYYRNYQLTDKS---DVYSYGVVLL 540
E + + D +S GV+L
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 353 ILGSGGFGEVYKGELQDGTVVAVKSAKVG------NIKSTQQVLNEVGILSQVNHKNLVR 406
LG GGF + + E+ D V + K+ +++ E+ I + H+++V
Sbjct: 24 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G + + ++ E +L + LH + + LT Q YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--LTEPEARYYLRQIVLGCQYLHRNR- 137
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+K N+ L++D K+ DFGL +++ G + C GT Y+ PE
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKKG 193
Query: 526 LTDKSDVYSYGVVLLELLTSQKAIDFS 552
+ + DV+S G ++ LL + + S
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 354 LGSGGFGEVYKGE--LQDGTVVAVKSAKVGNIKSTQ-QVLNEVGILSQVNHKNLVRLLGC 410
LG G + VYKG+ L D +VA+K ++ + + + EV +L + H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
+ L++EY+ + L +L + N+ + +L + Q LAY H +
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMH-NVKLFL-FQLLRGLAYCHRQK---VL 122
Query: 471 HRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE-YYRNYQLTDK 529
HRD+K N+L+++ K+ADFGL+R AK + TL Y P+ + + +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQ 181
Query: 530 SDVYSYGVVLLELLTSQ 546
D++ G + E+ T +
Sbjct: 182 IDMWGVGCIFYEMATGR 198
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 353 ILGSGGFGEVYKGELQDGTVVAVKSAKVG------NIKSTQQVLNEVGILSQVNHKNLVR 406
LG GGF + + E+ D V + K+ +++ E+ I + H+++V
Sbjct: 28 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 85
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G + + ++ E +L + LH + + LT Q YLH
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--LTEPEARYYLRQIVLGCQYLHRNR- 141
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+K N+ L++D K+ DFGL +++ G + C GT Y+ PE
Sbjct: 142 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKKG 197
Query: 526 LTDKSDVYSYGVVLLELLTSQKAIDFS 552
+ + DV+S G ++ LL + + S
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 353 ILGSGGFGEVYKGELQDGTVVAVKSAKVG------NIKSTQQVLNEVGILSQVNHKNLVR 406
LG GGF + + E+ D V + K+ +++ E+ I + H+++V
Sbjct: 24 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G + + ++ E +L + LH + + LT Q YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--LTEPEARYYLRQIVLGCQYLHRNR- 137
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+K N+ L++D K+ DFGL +++ G + C GT Y+ PE
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKKG 193
Query: 526 LTDKSDVYSYGVVLLELLTSQKAIDFS 552
+ + DV+S G ++ LL + + S
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
LG G F V + ++ G A K + K + + Q++ E I + H N+VRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGK--YSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
E L+++ + G L + + + YS + + + Q E++ + H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-----QILESVNHCH---LNG 123
Query: 469 IYHRDVKSTNILLDDDFNS---KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K N+LL K+ADFGL+ + G GT GYL PE R
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 526 LTDKSDVYSYGVVLLELLT 544
D+++ GV+L LL
Sbjct: 183 YGKPVDMWACGVILYILLV 201
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 354 LGSGGFGEVYK-GELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
LG G F V + ++ G A K + K + + Q++ E I + H N+VRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGK--YSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
E L+++ + G L + + + YS + + + Q E++ + H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-----QILESVNHCH---LNG 123
Query: 469 IYHRDVKSTNILLDDDFNS---KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
I HRD+K N+LL K+ADFGL+ + G GT GYL PE R
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 526 LTDKSDVYSYGVVLLELLTS 545
D+++ GV+L LL
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 19/216 (8%)
Query: 354 LGSGGFG--EVYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCC 411
+GSG FG + + +L +VAVK + G + V E+ + H N+VR
Sbjct: 28 IGSGNFGVARLMRDKLT-KELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 412 VEAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPI 469
+ +I EY + G L++ + G++S + + Q ++Y HS I
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ-----QLLSGVSYCHSMQ---I 137
Query: 470 YHRDVKSTNILLDDDFNS--KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLT 527
HRD+K N LLD K+ DFG S+ + ST GT Y+ PE +
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLRQEYD 195
Query: 528 DK-SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAI 562
K +DV+S GV L +L + +P D I
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI 231
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 121/293 (41%), Gaps = 31/293 (10%)
Query: 279 GLSLKISIGVISVLSLAIAVAAIKIICSRKLAKQ--AKLAKEREDMLKSSNIAG------ 330
G K S+ V +L +V++ + LAK A+ ++ RE K+ + G
Sbjct: 21 GAHEKFSVEEYLVHALQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEK 80
Query: 331 -KPARIFHLKELKKATNGFSKERILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQ 388
KP + +E+ AT+ LG G FGEV++ E Q G AVK ++ + ++
Sbjct: 81 LKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRL-EVFRAEE 135
Query: 389 VLNEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRL 448
++ G+ S +V L G E + E + G+L + L L
Sbjct: 136 LMACAGLTS----PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVK---EQGCLPEDRAL 188
Query: 449 RIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDF-NSKVADFGLSRLAKP-GLSH-- 504
Q E L YLHS I H DVK+ N+LL D ++ + DFG + +P GL
Sbjct: 189 YYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSL 245
Query: 505 -VSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTS-QKAIDFSRDP 555
GT ++ PE K DV+S ++L +L F R P
Sbjct: 246 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 298
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 353 ILGSGGFGEVYKGELQD-GTVVAVKS-AKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
ILG G V++G + G + A+K + ++ + E +L ++NHKN+V+L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 411 CVE--AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTP 468
E +LI E+ G+L+ L +++ L S L + + +L
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 469 IYHRDVKSTNIL--LDDDFNS--KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNY 524
I HR++K NI+ + +D S K+ DFG +R + V GT YL P+ Y
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY--GTEEYLHPDMYERA 190
Query: 525 QLTDKS--------DVYSYGVVLLELLTS 545
L D++S GV T
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 17/207 (8%)
Query: 353 ILGSGGFGEVYKGELQDGTVVAVKSAKVG------NIKSTQQVLNEVGILSQVNHKNLVR 406
LG GGF + + E+ D V + K+ +++ E+ I + H+++V
Sbjct: 46 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 103
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G + + ++ E +L + LH + + LT Q YLH
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--LTEPEARYYLRQIVLGCQYLHRNR- 159
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+K N+ L++D K+ DFGL +++ G C GT Y+ PE
Sbjct: 160 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSKKG 215
Query: 526 LTDKSDVYSYGVVLLELLTSQKAIDFS 552
+ + DV+S G ++ LL + + S
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 17/207 (8%)
Query: 353 ILGSGGFGEVYKGELQDGTVVAVKSAKVG------NIKSTQQVLNEVGILSQVNHKNLVR 406
LG GGF + + E+ D V + K+ +++ E+ I + H+++V
Sbjct: 48 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G + + ++ E +L + LH + + LT Q YLH
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--LTEPEARYYLRQIVLGCQYLHRNR- 161
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+K N+ L++D K+ DFGL +++ G C GT Y+ PE
Sbjct: 162 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSKKG 217
Query: 526 LTDKSDVYSYGVVLLELLTSQKAIDFS 552
+ + DV+S G ++ LL + + S
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVKS--AKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+GSG +G V + + G VA+K + ++ E+ +L + H+N++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLR-IALQTAEALAYLHSAAYTPI 469
E ++ GK R++ + Q + L Y+H+A I
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---I 149
Query: 470 YHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNY-QLTD 528
HRD+K N+ +++D K+ DFGL+R A + T Y PE N+ + T
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAPEVILNWMRYTQ 205
Query: 529 KSDVYSYGVVLLELLTSQ 546
D++S G ++ E++T +
Sbjct: 206 TVDIWSVGCIMAEMITGK 223
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 354 LGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+GSG FG + Q +VAVK + G K + V E+ + H N+VR +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGE-KIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 413 EAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
++ EY + G L + + G++S + + Q ++Y H+ +
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-----QLISGVSYCHAMQ---VC 136
Query: 471 HRDVKSTNILLDDDFNS--KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD 528
HRD+K N LLD K+ DFG S+ + ST GT Y+ PE +
Sbjct: 137 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDG 194
Query: 529 K-SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIY 563
K +DV+S GV L +L + +P + I+
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 230
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 17/207 (8%)
Query: 353 ILGSGGFGEVYKGELQDGTVVAVKSAKVG------NIKSTQQVLNEVGILSQVNHKNLVR 406
LG GGF + + E+ D V + K+ +++ E+ I + H+++V
Sbjct: 22 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 79
Query: 407 LLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAY 466
G + + ++ E +L + LH + + LT Q YLH
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKA--LTEPEARYYLRQIVLGCQYLHRNR- 135
Query: 467 TPIYHRDVKSTNILLDDDFNSKVADFGL-SRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQ 525
+ HRD+K N+ L++D K+ DFGL +++ G C GT Y+ PE
Sbjct: 136 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSKKG 191
Query: 526 LTDKSDVYSYGVVLLELLTSQKAIDFS 552
+ + DV+S G ++ LL + + S
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 120/289 (41%), Gaps = 31/289 (10%)
Query: 283 KISIGVISVLSLAIAVAAIKIICSRKLAKQ--AKLAKEREDMLKSSNIAG-------KPA 333
K S+ V +L +V++ + LAK A+ ++ RE K+ + G KP
Sbjct: 6 KFSVEEYLVHALQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPV 65
Query: 334 RIFHLKELKKATNGFSKERILGSGGFGEVYKGE-LQDGTVVAVKSAKVGNIKSTQQVLNE 392
+ +E+ AT+ LG G FGEV++ E Q G AVK ++ + ++++
Sbjct: 66 DYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRL-EVFRAEELMAC 120
Query: 393 VGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIAL 452
G+ S +V L G E + E + G+L + L L
Sbjct: 121 AGLTS----PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVK---EQGCLPEDRALYYLG 173
Query: 453 QTAEALAYLHSAAYTPIYHRDVKSTNILLDDDF-NSKVADFGLSRLAKP-GLSH---VST 507
Q E L YLHS I H DVK+ N+LL D ++ + DFG + +P GL
Sbjct: 174 QALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
Query: 508 CAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTS-QKAIDFSRDP 555
GT ++ PE K DV+S ++L +L F R P
Sbjct: 231 YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 279
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 350 KERILGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVN-HKNLV 405
+E +LG G V L AVK + G+I+S +V EV +L Q H+N++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRS--RVFREVEMLYQCQGHRNVL 74
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+ E ++ L++E + G++ H+H + L S + A AL +LH+
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG 131
Query: 466 YTPIYHRDVKSTNILLDDDFN---SKVADFGL----------SRLAKPGLSHVSTCAQGT 512
I HRD+K NIL + K+ DFGL S ++ P L ++ C G+
Sbjct: 132 ---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL--LTPC--GS 184
Query: 513 LGYLDPE----YYRNYQLTDKS-DVYSYGVVLLELLTS 545
Y+ PE + + DK D++S GV+L LL+
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 25/216 (11%)
Query: 353 ILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLN------EVGILSQVN----H 401
+LG GGFG V+ G L D VA+K + + + EV +L +V H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 402 KNLVRLLGCCVEAEQPLLIYEY-IANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
++RLL E +L+ E + L D++ K L Q A+ +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVVAAIQH 154
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFN-SKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
HS + HRD+K NIL+D +K+ DFG L T GT Y PE
Sbjct: 155 CHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLH---DEPYTDFDGTRVYSPPE 208
Query: 520 YYRNYQLTD-KSDVYSYGVVLLELLTSQKAIDFSRD 554
+ +Q + V+S G++L +++ I F RD
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGD--IPFERD 242
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 354 LGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+GSG FG + Q +VAVK + G K V E+ + H N+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGE-KIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 413 EAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
++ EY + G L + + G++S + + Q ++Y H+ +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-----QLISGVSYCHAMQ---VC 137
Query: 471 HRDVKSTNILLDDDFNS--KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD 528
HRD+K N LLD K+ DFG S+ + ST GT Y+ PE +
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDG 195
Query: 529 K-SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIY 563
K +DV+S GV L +L + +P + I+
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 342 KKATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVN 400
+K + F ER+ G G FG V G E G VA+K + + + + L + L+ ++
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDPRFRNRELQIMQDLAVLH 77
Query: 401 HKNLVRL------LGCCVEAEQPL-LIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIAL- 452
H N+V+L LG + L ++ EY+ + TLH Y +++ L
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 453 QTAEALAYLHSAAYTPIYHRDVKSTNILLDD-DFNSKVADFGLSRLAKPGLSHVSTCAQG 511
Q ++ LH + + HRD+K N+L+++ D K+ DFG ++ P ++
Sbjct: 137 QLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP--------SEP 187
Query: 512 TLGYLDPEYYR-------NYQLTDKSDVYSYGVVLLELLTSQ 546
+ Y+ YYR N T D++S G + E++ +
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 97/226 (42%), Gaps = 37/226 (16%)
Query: 351 ERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVN-HKNLVRLL 408
E+ILG G G V ++G Q G VAVK I L E+ +L++ + H N++R
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRML---IDFCDIALMEIKLLTESDDHPNVIRYY 75
Query: 409 GCCVEAEQPLLIYEYIANGTLHDHLHGK-YSSFNLTWSTR---LRIALQTAEALAYLHSA 464
C ++ L I + N L D + K S NL + + Q A +A+LHS
Sbjct: 76 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 465 AYTPIYHRDVKSTNILLD-------------DDFNSKVADFGLSRLAKPGLSHVST---C 508
I HRD+K NIL+ ++ ++DFGL + G S T
Sbjct: 135 K---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 509 AQGTLGYLDPEYYR---NYQ----LTDKSDVYSYGVVLLELLTSQK 547
GT G+ PE N Q LT D++S G V +L+ K
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 330 GKPARIFHLKELKKA-TNGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQ 387
G+ +RI ++ +++ N E+ILG G G V ++G Q G VAVK I
Sbjct: 16 GRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRML---IDFCD 71
Query: 388 QVLNEVGILSQVN-HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK-YSSFNLTWS 445
L E+ +L++ + H N++R C ++ L I + N L D + K S NL
Sbjct: 72 IALMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ 130
Query: 446 TR---LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLD-------------DDFNSKV 489
+ + Q A +A+LHS I HRD+K NIL+ ++ +
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 187
Query: 490 ADFGLSRLAKPGLSHVS---TCAQGTLGYLDPEYYR---NYQLTDKSDVYSYGVVLLELL 543
+DFGL + G GT G+ PE +LT D++S G V +L
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
Query: 544 TSQK 547
+ K
Sbjct: 248 SKGK 251
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 330 GKPARIFHLKELKKA-TNGFSKERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQ 387
G+ +RI ++ +++ N E+ILG G G V ++G Q G VAVK I
Sbjct: 16 GRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRML---IDFCD 71
Query: 388 QVLNEVGILSQVN-HKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGK-YSSFNLTWS 445
L E+ +L++ + H N++R C ++ L I + N L D + K S NL
Sbjct: 72 IALMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ 130
Query: 446 TR---LRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLD-------------DDFNSKV 489
+ + Q A +A+LHS I HRD+K NIL+ ++ +
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 187
Query: 490 ADFGLSRLAKPGLSHVS---TCAQGTLGYLDPEYYR---NYQLTDKSDVYSYGVVLLELL 543
+DFGL + G GT G+ PE +LT D++S G V +L
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
Query: 544 TSQK 547
+ K
Sbjct: 248 SKGK 251
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 352 RILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNH-KNLVRLLG 409
R LG G + EV++ + + V VK K +K + + E+ IL + N++ L
Sbjct: 43 RKLGRGKYSEVFEAINITNNEKVVVKILK--PVKKNK-IKREIKILENLRGGPNIITLAD 99
Query: 410 CCVE--AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYT 467
+ + P L++E++ N T L+ + +++ + + +AL Y HS
Sbjct: 100 IVKDPVSRTPALVFEHV-NNTDFKQLYQTLTDYDIRF-----YMYEILKALDYCHSMG-- 151
Query: 468 PIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSH-VSTCAQGTLGYLDPEYYRNYQ 525
I HRDVK N+++D + ++ D+GL+ PG + V ++ G PE +YQ
Sbjct: 152 -IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQ 207
Query: 526 LTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDD 557
+ D S D++S G +L ++ ++ D D
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 240
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKS--TQQVLNEVGILSQVNHKNLVRLLGC 410
LG G +GEVYK + VA+K ++ + + + EV +L ++ H+N++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRL--RIALQTAEALAYLHSAAYTP 468
+ LI+EY N KY N S R+ Q + + HS
Sbjct: 102 IHHNHRLHLIFEYAENDL------KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR--- 152
Query: 469 IYHRDVKSTNILLDDDFNS-----KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY-- 521
HRD+K N+LL S K+ DFGL+R + T TL Y PE
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF-THEIITLWYRPPEILLG 211
Query: 522 -RNYQLTDKSDVYSYGVVLLELL 543
R+Y + D++S + E+L
Sbjct: 212 SRHYSTS--VDIWSIACIWAEML 232
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 338 LKELKKATNGFSKERILGSGGFGEVYKGELQDGT-VVAVKSAKVGNI---KSTQQVLNEV 393
+K+++ F +++G G FGEV +L++ V A+K + T E
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREER 125
Query: 394 GILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTL-------HDHLHGKYSSFNLTWST 446
+L + K + L + L+ +Y G L D L + + F L
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLA--- 182
Query: 447 RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLS-RLAKPGLSHV 505
+ IA+ + L Y+H RD+K NIL+D + + ++ADFG +L + G
Sbjct: 183 EMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ- 232
Query: 506 STCAQGTLGYLDPEYYRNYQ-----LTDKSDVYSYGVVLLELLTSQ 546
S+ A GT Y+ PE + + + D +S GV + E+L +
Sbjct: 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 9/189 (4%)
Query: 335 IFHLKELKKATNGFSKERILGSGGFGEVYKGEL-QDGTVVAVKSAKVGNIKSTQQV---L 390
+ LKE++ + F +++G G F EV ++ Q G V A+K ++ +V
Sbjct: 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 391 NEVGILSQVNHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRI 450
E +L + + + +L + L+ EY G L L K+ R +
Sbjct: 110 EERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLL-TLLSKFGERIPAEMARFYL 168
Query: 451 ALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQ 510
A + A+ +H Y HRD+K NILLD + ++ADFG + + S A
Sbjct: 169 A-EIVMAIDSVHRLGYV---HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224
Query: 511 GTLGYLDPE 519
GT YL PE
Sbjct: 225 GTPDYLSPE 233
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 354 LGSGGFGEVYKG-ELQDGTVVAVKSAK-VGNIKSTQQVLNEVGILSQVNH-KNLVRLLGC 410
+G G +G V K G ++AVK + + K +Q+L ++ ++ + + +V+ G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGK-YSSFNLTWSTRL--RIALQTAEALAYLHSAAYT 467
+ E ++ T D + YS + + +I L T +AL +L
Sbjct: 90 LFREGDCWICMELMS--TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--L 145
Query: 468 PIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY------ 521
I HRD+K +NILLD N K+ DFG+S + S T G Y+ PE
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 522 RNYQLTDKSDVYSYGVVLLELLTSQ 546
+ Y + +SDV+S G+ L EL T +
Sbjct: 204 QGYDV--RSDVWSLGITLYELATGR 226
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 353 ILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKS-----TQQVLNEVGILSQVNHKNLVR 406
++G G F V + + G AVK V S T+ + E I + H ++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 407 LLGCCVEAEQPLLIYEYIANGTL-HDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LL +++E++ L + + + F + + Q EAL Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD-- 148
Query: 466 YTPIYHRDVKSTNILLDDDFNS---KVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYY 521
I HRDVK +LL NS K+ FG++ +L + GL V+ GT ++ PE
Sbjct: 149 -NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVV 205
Query: 522 RNYQLTDKSDVYSYGVVLLELLTS 545
+ DV+ GV+L LL+
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSG 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 353 ILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKS-----TQQVLNEVGILSQVNHKNLVR 406
++G G F V + + G AVK V S T+ + E I + H ++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 407 LLGCCVEAEQPLLIYEYIANGTL-HDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
LL +++E++ L + + + F + + Q EAL Y H
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD-- 150
Query: 466 YTPIYHRDVKSTNILLDDDFNS---KVADFGLS-RLAKPGLSHVSTCAQGTLGYLDPEYY 521
I HRDVK +LL NS K+ FG++ +L + GL V+ GT ++ PE
Sbjct: 151 -NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVV 207
Query: 522 RNYQLTDKSDVYSYGVVLLELLTS 545
+ DV+ GV+L LL+
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSG 231
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 354 LGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+GSG FG + Q +VAVK + G K + V E+ + H N+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGE-KIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 413 EAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
++ EY + G L + + G++S + + Q ++Y H+ +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-----QLISGVSYCHAMQ---VC 137
Query: 471 HRDVKSTNILLDDDFNS--KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD 528
HRD+K N LLD K+ FG S+ + ST GT Y+ PE +
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDG 195
Query: 529 K-SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIY 563
K +DV+S GV L +L + +P + I+
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 35/277 (12%)
Query: 354 LGSGGFGEVYKGE-LQDGTVVAVKSAKVG-NIKSTQQVLNEVGI-LSQVNHKNLVRLLGC 410
LG G +G V K + G ++AVK + N + +++L ++ I + V+ V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRL--RIALQTAEALAYLHSAAYTP 468
+ E + T D + + T + +IA+ +AL +LHS
Sbjct: 119 LFREGDVWICMELM--DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 174
Query: 469 IYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD 528
+ HRDVK +N+L++ K+ DFG+S ++ T G Y+ PE N +L
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA--KTIDAGCKPYMAPERI-NPELNQ 231
Query: 529 -----KSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQG 583
KSD++S G+ ++EL + D P Q+ ++E P+L
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTP---------FQQLKQ--VVEEPSPQLPA 280
Query: 584 HEASVNILMSLKLFSELAVACLREKKSERPSMTDVVH 620
+ S F + CL++ ERP+ +++
Sbjct: 281 DKFSAE-------FVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 34/218 (15%)
Query: 350 KERILGSGGFGEVYKG-ELQDGTVVAVK--SAKVGNIKSTQQVLNEVGILSQVN-HKNLV 405
+E +LG G V L AVK + G+I+S +V EV +L Q H+N++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRS--RVFREVEMLYQCQGHRNVL 74
Query: 406 RLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAA 465
L+ E ++ L++E + G++ H+H + L S + A AL +LH+
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG 131
Query: 466 YTPIYHRDVKSTNILLDDDFN---SKVADFGL----------SRLAKPGLSHVSTCAQGT 512
I HRD+K NIL + K+ DF L S ++ P L ++ C G+
Sbjct: 132 ---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL--LTPC--GS 184
Query: 513 LGYLDPE----YYRNYQLTDKS-DVYSYGVVLLELLTS 545
Y+ PE + + DK D++S GV+L LL+
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 442 LTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSRLAKPG 501
+T + + Q A + +L S HRD+ + NILL ++ K+ DFGL+R
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 502 LSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+V + L ++ PE + + KSDV+SYGV+L E+ +
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 348 FSKERI-----LGSGGFGEVYK----GELQDGT--VVAVKSAKVGNIKSTQQVL-NEVGI 395
F++ER+ LG G FG+V + G + T VAVK K G S + L E+ I
Sbjct: 24 FARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKI 83
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSFNL 442
L+ + H N+V LLG C + PL+ I EY G L ++L K F L
Sbjct: 84 LTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFL 132
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 354 LGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCV 412
+GSG FG + Q +VAVK + G K + V E+ + H N+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGE-KIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 413 EAEQPLLIYEYIANGTLHDHL--HGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
++ EY + G L + + G++S + + Q ++Y H+ +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-----QLISGVSYCHAMQ---VC 137
Query: 471 HRDVKSTNILLDDDFNS--KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYYRNYQLTD 528
HRD+K N LLD K+ FG S+ + L GT Y+ PE +
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSKSSV--LHSQPKDTVGTPAYIAPEVLLKKEYDG 195
Query: 529 K-SDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIY 563
K +DV+S GV L +L + +P + I+
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 343 KATNGFSKERILGSGGFGEVYKG-ELQDGTVVAVKSAKVGNIKSTQ-QVLNEVGILSQVN 400
+ N F R +GSG FGE+Y G +Q VA+ K+ N+K+ Q+L E I +
Sbjct: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAI---KLENVKTKHPQLLYESKIYRILQ 60
Query: 401 HKNL---VRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEA 457
VR G VE + +L+ + + +L D + + S L+ T L +A Q
Sbjct: 61 GGTGIPNVRWFG--VEGDYNVLVMDLLGP-SLEDLFN--FCSRKLSLKTVLMLADQMINR 115
Query: 458 LAYLHSAAYTPIYHRDVKSTNILLDDDFNSK---VADFGLSRLAKPGLSHVSTCAQ---- 510
+ ++HS ++ HRD+K N L+ + + DFGL++ + +H +
Sbjct: 116 VEFVHSKSFL---HRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKN 172
Query: 511 --GTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELL 543
GT Y + + + + D+ S G VL+ L
Sbjct: 173 LTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFL 207
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 437 YSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR 496
Y F LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 193 YKDF-LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR 248
Query: 497 LAKPGLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDP 555
+V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P
Sbjct: 249 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP 304
Query: 556 DDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSM 615
V + +R G M D + + + C + S+RP+
Sbjct: 305 -GVKIDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTF 350
Query: 616 TDVVHELQRIIEIVNQE 632
+++V L +++ Q+
Sbjct: 351 SELVEHLGNLLQANAQQ 367
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 26 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 85
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 132
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 437 YSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR 496
Y F LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 191 YKDF-LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR 246
Query: 497 LAKPGLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDP 555
+V A+ L ++ PE + T +SDV+S+GV+L E+ + + S P
Sbjct: 247 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYP 302
Query: 556 DDVNLAIYVSQRASNGAIMEVVDPRLQGHEASVNILMSLKLFSELAVACLREKKSERPSM 615
V + +R G M D + + + C + S+RP+
Sbjct: 303 -GVKIDEEFCRRLKEGTRMRAPD-------------YTTPEMYQTMLDCWHGEPSQRPTF 348
Query: 616 TDVVHELQRIIEIVNQE 632
+++V L +++ Q+
Sbjct: 349 SELVEHLGNLLQANAQQ 365
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 83
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 388 QVLNEVGILSQVNH-KNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWST 446
++L+E+ +L ++ L + +LI EY A G + + + ++ +
Sbjct: 74 EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEM-VSEND 132
Query: 447 RLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDF---NSKVADFGLSRLAKPGLS 503
+R+ Q E + YLH I H D+K NILL + + K+ DFG+SR K G +
Sbjct: 133 VIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHA 187
Query: 504 HVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
GT YL PE +T +D+++ G++ LLT
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 437 YSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR 496
Y F LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 186 YKDF-LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR 241
Query: 497 LAKPGLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+V A+ L ++ PE + T +SDV+S+GV+L E+ +
Sbjct: 242 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 78
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 79 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 125
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 437 YSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR 496
Y F LT + + Q A+ + +L S HRD+ + NILL + K+ DFGL+R
Sbjct: 184 YKDF-LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR 239
Query: 497 LAKPGLSHVSTC-AQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLT 544
+V A+ L ++ PE + T +SDV+S+GV+L E+ +
Sbjct: 240 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 348 FSKERI-----LGSGGFGEVYKGELQ--DGT----VVAVKSAKVGNIKSTQQVL-NEVGI 395
F ++R+ LG G FG+V + + D T VAVK K G S + L +E+ I
Sbjct: 17 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 76
Query: 396 LSQVNHK-NLVRLLGCCVEAEQPLL-IYEYIANGTLHDHLHGKYSSF 440
L + H N+V LLG C + PL+ I E+ G L +L K + F
Sbjct: 77 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 123
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 351 ERILGSGGFGEV-YKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVN-HKNLVRLL 408
E+ILG G G V ++G Q G VAVK I L E+ +L++ + H N++R
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRML---IDFCDIALMEIKLLTESDDHPNVIRYY 75
Query: 409 GCCVEAEQPLLIYEYIANGTLHDHLHGK-YSSFNLTWSTR---LRIALQTAEALAYLHSA 464
C ++ L I + N L D + K S NL + + Q A +A+LHS
Sbjct: 76 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 465 AYTPIYHRDVKSTNILLD-------------DDFNSKVADFGLSRLAKPGLSHVS---TC 508
I HRD+K NIL+ ++ ++DFGL + G
Sbjct: 135 K---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 191
Query: 509 AQGTLGYLDPEYYR---NYQ----LTDKSDVYSYGVVLLELLTSQK 547
GT G+ PE N Q LT D++S G V +L+ K
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 22/157 (14%)
Query: 403 NLVRLLGCCVE--AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
N+++L+ + ++ P L++EYI N T L+ + F++ + + +AL Y
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYI-NNTDFKQLYQILTDFDIRF-----YMYELLKALDY 147
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
HS I HRDVK N+++D ++ D+GL+ P + A + + PE
Sbjct: 148 CHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVA--SRYFKGPE 202
Query: 520 YYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDP 555
+YQ+ D S D++S G +L ++ F R+P
Sbjct: 203 LLVDYQMYDYSLDMWSLGCMLASMI-------FRREP 232
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 22/157 (14%)
Query: 403 NLVRLLGCCVE--AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
N+++L+ + ++ P L++EYI N T L+ + F++ + + +AL Y
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYI-NNTDFKQLYQILTDFDIRF-----YMYELLKALDY 152
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
HS I HRDVK N+++D ++ D+GL+ P + A + + PE
Sbjct: 153 CHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVA--SRYFKGPE 207
Query: 520 YYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDP 555
+YQ+ D S D++S G +L ++ F R+P
Sbjct: 208 LLVDYQMYDYSLDMWSLGCMLASMI-------FRREP 237
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 348 FSKERILGSGGFGE-VYKGELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVN-HKNLV 405
F + +LG G G VY+G + D VAVK + EV +L + + H N++
Sbjct: 26 FCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFADR---EVQLLRESDEHPNVI 81
Query: 406 RLLGCCVEAEQPLLIYEYIA----NGTLHDHLHGK-YSSFNLTWSTRLRIALQTAEALAY 460
R C E ++ ++YIA TL +++ K ++ L T L+ QT LA+
Sbjct: 82 RYF--CTEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ---QTTSGLAH 133
Query: 461 LHSAAYTPIYHRDVKSTNILLD-----DDFNSKVADFGLSRLAKPGLSHVS--TCAQGTL 513
LHS I HRD+K NIL+ + ++DFGL + G S + GT
Sbjct: 134 LHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 514 GYLDPEYYRN---YQLTDKSDVYSYGVVLLELLTS 545
G++ PE T D++S G V +++
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE 225
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 26/260 (10%)
Query: 295 AIAVAAIKIICSRKLAKQAKLAKERED---MLKSSNIAGKPARIFHLKELKKATNGFSKE 351
A ++A++ S AK +L E ED +L + + KP E ++ + + +
Sbjct: 24 AHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKL--KPVDY----EYREEVHWMTHQ 77
Query: 352 RILGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
LG G FGEV++ + Q G AVK ++ + + E+ + ++ +V L G
Sbjct: 78 PRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGA 132
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
E + E + G+L + L L Q E L YLH+ I
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRR---IL 186
Query: 471 HRDVKSTNILLDDDFN-SKVADFGLSRLAKP-GLSH---VSTCAQGTLGYLDPEYYRNYQ 525
H DVK+ N+LL D + + + DFG + +P GL GT ++ PE
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 526 LTDKSDVYSYGVVLLELLTS 545
K D++S ++L +L
Sbjct: 247 CDAKVDIWSSCCMMLHMLNG 266
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 37/278 (13%)
Query: 354 LGSGGFGEVYKGE-LQDGTVVAVKSAKVG-NIKSTQQVLNEVGI-LSQVNHKNLVRLLGC 410
LG G +G V K + G ++AVK + N + +++L ++ I + V+ V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRL--RIALQTAEALAYLHSAAYTP 468
+ E + T D + + T + +IA+ +AL +LHS
Sbjct: 75 LFREGDVWICMELM--DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LS 130
Query: 469 IYHRDVKSTNILLDDDFNSKVADFGLSRLAKPGLSHVSTCAQGTLGYLDPEYY------R 522
+ HRDVK +N+L++ K+ DFG+S ++ G Y+ PE +
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA--KDIDAGCKPYMAPERINPELNQK 188
Query: 523 NYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDPDDVNLAIYVSQRASNGAIMEVVDPRLQ 582
Y + KSD++S G+ ++EL + D P Q+ ++E P+L
Sbjct: 189 GYSV--KSDIWSLGITMIELAILRFPYDSWGTP---------FQQLKQ--VVEEPSPQLP 235
Query: 583 GHEASVNILMSLKLFSELAVACLREKKSERPSMTDVVH 620
+ S F + CL++ ERP+ +++
Sbjct: 236 ADKFSAE-------FVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 48/243 (19%)
Query: 343 KATNGFSKERILGSGGFGEVYKGELQDGTV-VAVKSAK--VGNIKSTQQVLNEVGILSQV 399
K + + + ++G G +G VY ++ VA+K ++ +++L E+ IL+++
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 400 NHKNLVRLLGCCVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALA 459
++RL + + LL ++ L+ L S + T + + Q + +
Sbjct: 85 KSDYIIRLHDLIIPED--LLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEQHVKTIL 137
Query: 460 Y--------LHSAAYTPIYHRDVKSTNILLDDDFNSKVADFGLSR--------------- 496
Y +H + I HRD+K N LL+ D + K+ DFGL+R
Sbjct: 138 YNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLE 194
Query: 497 ----LAKPGLSHVSTCAQGTLGYLDPEYYRNYQL-------TDKSDVYSYGVVLLELLTS 545
+PG H + ++ +YR +L T+ D++S G + ELL
Sbjct: 195 EKEENEEPG-PHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNM 253
Query: 546 QKA 548
K+
Sbjct: 254 MKS 256
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
Query: 417 PLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIYHRDVKS 476
P L++E++ N T L+ + +++ + + +AL Y HS I HRDVK
Sbjct: 109 PALVFEHV-NNTDFKQLYQTLTDYDIRF-----YMYEILKALDYCHSMG---IMHRDVKP 159
Query: 477 TNILLDDDFNS-KVADFGLSRLAKPGLSH-VSTCAQGTLGYLDPEYYRNYQLTDKS-DVY 533
N+L+D + ++ D+GL+ PG + V ++ G PE +YQ+ D S D++
Sbjct: 160 HNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMW 216
Query: 534 SYGVVLLELLTSQK 547
S G +L ++ ++
Sbjct: 217 SLGCMLASMIFRKE 230
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 26/260 (10%)
Query: 295 AIAVAAIKIICSRKLAKQAKLAKERED---MLKSSNIAGKPARIFHLKELKKATNGFSKE 351
A ++A++ S AK +L E ED +L + + KP E ++ + + +
Sbjct: 10 AHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKL--KPVDY----EYREEVHWMTHQ 63
Query: 352 RILGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+G G FGEV++ + Q G AVK ++ + + E+ + ++ +V L G
Sbjct: 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGA 118
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
E + E + G+L + L L Q E L YLH+ I
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRR---IL 172
Query: 471 HRDVKSTNILLDDDFN-SKVADFGLSRLAKP-GLSH---VSTCAQGTLGYLDPEYYRNYQ 525
H DVK+ N+LL D + + + DFG + +P GL GT ++ PE
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 526 LTDKSDVYSYGVVLLELLTS 545
K D++S ++L +L
Sbjct: 233 CDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 26/260 (10%)
Query: 295 AIAVAAIKIICSRKLAKQAKLAKERED---MLKSSNIAGKPARIFHLKELKKATNGFSKE 351
A ++A++ S AK +L E ED +L + + KP E ++ + + +
Sbjct: 26 AHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKL--KPVDY----EYREEVHWMTHQ 79
Query: 352 RILGSGGFGEVYK-GELQDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGC 410
+G G FGEV++ + Q G AVK ++ + + E+ + ++ +V L G
Sbjct: 80 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGA 134
Query: 411 CVEAEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAYLHSAAYTPIY 470
E + E + G+L + L L Q E L YLH+ I
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRR---IL 188
Query: 471 HRDVKSTNILLDDDFN-SKVADFGLSRLAKP-GLSH---VSTCAQGTLGYLDPEYYRNYQ 525
H DVK+ N+LL D + + + DFG + +P GL GT ++ PE
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 526 LTDKSDVYSYGVVLLELLTS 545
K D++S ++L +L
Sbjct: 249 CDAKVDIWSSCCMMLHMLNG 268
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 20/190 (10%)
Query: 403 NLVRLLGCCVE--AEQPLLIYEYIANGTLHDHLHGKYSSFNLTWSTRLRIALQTAEALAY 460
N+V+LL + ++ P LI+EY+ N T L+ + +++ + + +AL Y
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYV-NNTDFKVLYPTLTDYDIRYYI-----YELLKALDY 161
Query: 461 LHSAAYTPIYHRDVKSTNILLDDDFNS-KVADFGLSRLAKPGLSHVSTCAQGTLGYLDPE 519
HS I HRDVK N+++D + ++ D+GL+ PG + A + + PE
Sbjct: 162 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA--SRYFKGPE 216
Query: 520 YYRNYQLTDKS-DVYSYGVVLLELLTSQKAIDFSRDPDD--VNLAIYVSQRASNGAIMEV 576
+ Q D S D++S G + ++ ++ + D D V +A + N + +
Sbjct: 217 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKY 276
Query: 577 ---VDPRLQG 583
+DP+L+
Sbjct: 277 RIELDPQLEA 286
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,976,606
Number of Sequences: 62578
Number of extensions: 758214
Number of successful extensions: 4570
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 225
Number of HSP's that attempted gapping in prelim test: 1932
Number of HSP's gapped (non-prelim): 1172
length of query: 646
length of database: 14,973,337
effective HSP length: 105
effective length of query: 541
effective length of database: 8,402,647
effective search space: 4545832027
effective search space used: 4545832027
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)