Query 006413
Match_columns 646
No_of_seqs 328 out of 1341
Neff 5.3
Searched_HMMs 46136
Date Thu Mar 28 22:56:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006413.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006413hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02829 Probable galacturonos 100.0 4E-172 8E-177 1409.1 44.5 634 1-646 3-639 (639)
2 PLN02718 Probable galacturonos 100.0 8E-150 2E-154 1235.0 45.1 583 1-645 6-602 (603)
3 PLN02910 polygalacturonate 4-a 100.0 6E-133 1E-137 1097.5 35.7 462 184-645 191-656 (657)
4 PLN02742 Probable galacturonos 100.0 3E-129 7E-134 1060.3 38.7 464 182-645 66-534 (534)
5 PLN02769 Probable galacturonos 100.0 3E-125 6E-130 1044.1 43.4 453 183-645 174-629 (629)
6 PLN02870 Probable galacturonos 100.0 8E-110 2E-114 906.3 30.2 424 213-645 87-531 (533)
7 PLN02523 galacturonosyltransfe 100.0 5E-108 1E-112 894.4 34.7 458 188-646 80-559 (559)
8 PLN02867 Probable galacturonos 100.0 3E-108 5E-113 897.7 29.2 422 224-645 94-534 (535)
9 PLN02659 Probable galacturonos 100.0 1E-107 2E-112 890.1 30.5 424 213-645 87-532 (534)
10 cd06429 GT8_like_1 GT8_like_1 100.0 7.6E-56 1.7E-60 455.1 22.1 255 339-633 1-257 (257)
11 PRK15171 lipopolysaccharide 1, 100.0 1E-41 2.2E-46 362.4 20.6 258 336-639 23-292 (334)
12 cd06431 GT8_LARGE_C LARGE cata 100.0 6.2E-40 1.3E-44 341.2 20.2 261 341-641 5-277 (280)
13 cd00505 Glyco_transf_8 Members 100.0 1.8E-38 3.8E-43 322.3 19.8 237 339-617 1-245 (246)
14 cd04194 GT8_A4GalT_like A4GalT 100.0 5.4E-38 1.2E-42 317.9 17.1 237 339-617 1-247 (248)
15 COG1442 RfaJ Lipopolysaccharid 100.0 3.2E-36 6.9E-41 318.1 20.4 257 338-639 2-267 (325)
16 PF01501 Glyco_transf_8: Glyco 100.0 6.6E-35 1.4E-39 289.3 15.5 245 340-619 1-249 (250)
17 cd06430 GT8_like_2 GT8_like_2 100.0 1.3E-31 2.8E-36 280.6 19.3 250 339-635 1-276 (304)
18 cd06432 GT8_HUGT1_C_like The C 100.0 4.4E-31 9.6E-36 270.5 15.3 231 339-612 1-240 (248)
19 cd02537 GT8_Glycogenin Glycoge 99.9 6.5E-24 1.4E-28 215.9 18.8 219 341-632 3-237 (240)
20 PLN00176 galactinol synthase 99.9 8E-23 1.7E-27 217.1 18.4 170 450-634 100-293 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.7 1.6E-17 3.5E-22 173.1 7.3 141 446-620 76-242 (278)
22 KOG1879 UDP-glucose:glycoprote 99.1 2.9E-10 6.4E-15 134.3 8.6 254 337-633 1180-1444(1470)
23 COG5597 Alpha-N-acetylglucosam 97.8 8.6E-06 1.9E-10 85.6 2.9 89 451-542 156-273 (368)
24 PLN03182 xyloglucan 6-xylosylt 94.3 0.21 4.5E-06 55.4 9.4 159 444-630 179-376 (429)
25 PF03407 Nucleotid_trans: Nucl 93.8 0.11 2.4E-06 51.6 5.7 144 447-612 48-202 (212)
26 PF11051 Mannosyl_trans3: Mann 79.8 5.7 0.00012 41.8 7.4 35 453-487 80-114 (271)
27 PLN03181 glycosyltransferase; 75.2 12 0.00026 42.1 8.5 35 444-479 180-214 (453)
28 COG4575 ElaB Uncharacterized c 72.0 15 0.00032 33.8 6.8 75 215-291 11-86 (104)
29 PF10819 DUF2564: Protein of u 65.3 18 0.00038 31.7 5.6 69 219-288 6-78 (79)
30 PF05637 Glyco_transf_34: gala 64.5 4.3 9.2E-05 42.1 2.1 23 461-483 74-96 (239)
31 KOG1928 Alpha-1,4-N-acetylgluc 57.9 5 0.00011 44.5 1.3 31 451-485 229-259 (409)
32 PRK10132 hypothetical protein; 57.4 52 0.0011 30.4 7.7 76 215-292 15-90 (108)
33 KOG1950 Glycosyl transferase, 52.4 31 0.00067 37.9 6.4 149 461-618 122-288 (369)
34 TIGR02977 phageshock_pspA phag 47.1 35 0.00076 34.9 5.4 109 184-292 25-137 (219)
35 PRK10807 paraquat-inducible pr 35.4 1.1E+02 0.0025 35.7 7.8 46 240-289 473-518 (547)
36 PF04488 Gly_transf_sug: Glyco 35.3 20 0.00043 31.9 1.3 36 445-484 61-97 (103)
37 cd02514 GT13_GLCNAC-TI GT13_GL 34.1 1.9E+02 0.0042 31.8 8.8 113 340-485 3-119 (334)
38 PF04012 PspA_IM30: PspA/IM30 33.0 80 0.0017 31.9 5.4 110 185-294 25-138 (221)
39 cd00761 Glyco_tranf_GTA_type G 30.9 3.4E+02 0.0074 23.2 9.5 38 344-383 5-42 (156)
40 PF03071 GNT-I: GNT-I family; 29.7 1.9E+02 0.0041 33.1 8.0 118 338-486 94-214 (434)
41 PRK10404 hypothetical protein; 29.3 2.3E+02 0.0051 25.8 7.2 80 211-292 4-84 (101)
42 PF06785 UPF0242: Uncharacteri 28.3 2.7E+02 0.0058 30.9 8.4 105 193-299 109-225 (401)
43 PRK10698 phage shock protein P 27.9 1.1E+02 0.0024 31.6 5.4 112 183-294 24-139 (222)
44 PRK15384 type III secretion sy 25.0 35 0.00076 36.0 1.2 85 210-295 68-157 (336)
45 PF03314 DUF273: Protein of un 24.9 47 0.001 34.4 2.0 25 455-479 33-57 (222)
46 PRK15383 type III secretion sy 24.6 37 0.00081 35.8 1.3 88 208-296 67-159 (335)
47 PRK15382 non-LEE encoded effec 24.5 38 0.00082 35.8 1.3 88 209-297 62-154 (326)
48 PF06103 DUF948: Bacterial pro 23.0 1.8E+02 0.004 25.2 5.2 62 217-284 20-81 (90)
49 PF05957 DUF883: Bacterial pro 21.9 2.9E+02 0.0064 24.2 6.3 77 216-294 2-79 (94)
50 PRK13817 ribosome-binding fact 21.8 80 0.0017 29.5 2.8 62 199-260 43-110 (119)
51 PLN02718 Probable galacturonos 21.6 5E+02 0.011 31.0 9.7 69 213-281 162-232 (603)
No 1
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=3.8e-172 Score=1409.08 Aligned_cols=634 Identities=76% Similarity=1.209 Sum_probs=605.6
Q ss_pred CchhhHHHHHHHHHhhhheeeeeccccccCCCCccchhhhhhhhhccccCCCccccccccCccccccccCCe-EEEeccc
Q 006413 1 MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPI-LVISDKI 79 (646)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (646)
|+.|++||+||||||+|||+|||+||++.| ||++++||+|||+++++++|+.+||+||||+++ +||||+ |||+|++
T Consensus 3 ~~~r~~~~~~l~~~v~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~lk~p~~~~~~~~~ 79 (639)
T PLN02829 3 MRLRNLVLGLLLLTVLSPILLYTDRLSASF-TPSSKRDFLEDVTALTLGGDASKLNVLPQESSS--SLKEPIGIVYSDNS 79 (639)
T ss_pred HHHHHHHHHHHHHHHhhceeEEeccccccc-CCcchhhhhHHHHhhccCccchhcccccccccc--cccCceeEEeeccc
Confidence 678999999999999999999999999966 999999999999999999999999999999999 999999 9999998
Q ss_pred ccc--cccccccccCccccccccceeccccCCCCCCCCCcccccccchhhhhccccchhhhhhccccccccccccccccc
Q 006413 80 AQH--SAHSQSQSQGSWEHKSARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKH 157 (646)
Q Consensus 80 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (646)
++. ...++++++|.+||| +||||++ +++++|++|++|+|||+...+....+.+ .|+.+.+.++..++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 150 (639)
T PLN02829 80 SKTIEPDSQDLLLDKRGEHK-ARVLSAT-DDDTHSQTDDIIKQVTQKAGQDDSDQQE-------KNSQSQSASQAESLEH 150 (639)
T ss_pred cccccccccccccccccchh-hhhcccc-ccccccccchhHHHhhhccccccccccc-------ccccccccccccchhh
Confidence 773 457899999999999 9999997 5569999999999999866443322221 2355566778888999
Q ss_pred cccccccccccccCCccccccccccCCCCCchhHHHHhhhhHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCC
Q 006413 158 QQESSLTYGVLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATK 237 (646)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~ 237 (646)
.|++.+++++.++++|..++++++++.++|+|++||+|||||||||||++|||++||++|+||||++|||+||+||+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~lkDql~~AkaY~~iak~~~~~~l~~el~~~i~e~~r~l~~a~~ 230 (639)
T PLN02829 151 VQQSAQTSEKVDEKEPLLTKTDKQTDQTVMPDARVRQLRDQLIKAKVYLSLPATKANPHFTRELRLRIKEVQRVLGDASK 230 (639)
T ss_pred hhhhhccccccccccccccccccccccccCchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccccccchhh
Q 006413 238 DSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEY 317 (646)
Q Consensus 238 d~~l~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey 317 (646)
|+|||+++.++|++|+++|++||+++|||+++++|||||++++||++++||+|++||+||||+|+|||||||+||||+||
T Consensus 231 d~~lp~~~~~~~~~m~~~i~~ak~~~~d~~~~~~KLr~~l~~~Ee~~~~~~~q~~~l~~laa~t~PK~lHCL~mrLt~Ey 310 (639)
T PLN02829 231 DSDLPKNANEKLKAMEQTLAKGKQMQDDCSIVVKKLRAMLHSAEEQLRVHKKQTMFLTQLTAKTLPKGLHCLPLRLTTEY 310 (639)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCccCCCCCCCcCCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEE
Q 006413 318 YTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQ 397 (646)
Q Consensus 318 ~~~~~~~~~~p~~~~l~d~~~iHIa~~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~ 397 (646)
|.+++.++++|++++++||+++|||+|||||+|++|||||++.|+++|+++|||||||++||.+|++||++||+++|+|+
T Consensus 311 ~~~~~~~~~~p~~~~l~dp~l~Hy~ifSdNVLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~ 390 (639)
T PLN02829 311 YNLNSSEQQFPNQEKLEDPQLYHYALFSDNVLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQ 390 (639)
T ss_pred HhCChhhccCCChhhccCCccceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhhCCCccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhcccccchhhhhhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeec
Q 006413 398 VQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQ 477 (646)
Q Consensus 398 v~nie~F~~l~~~y~p~L~ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~ 477 (646)
|+++|+|+|++.+|+|+++|+++..+++|||+.+..++..++++|+|+|+|+++|+|||||++||+++||||||+||||+
T Consensus 391 V~nie~f~wln~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVq 470 (639)
T PLN02829 391 VQNIEEFTWLNSSYSPVLKQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQ 470 (639)
T ss_pred EEehhhcccccccccHHHHHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeC
Confidence 99999999999999999999999999999998877677788999999999999999999999999999999999999999
Q ss_pred cCchhhhccCCCCCeeeeeccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcC
Q 006413 478 KDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH 557 (646)
Q Consensus 478 ~DLseLw~iDL~gkviAAVeDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~ 557 (646)
+||++||++||+|+++|||+||...|++|..|++|++|.+..+|+++.||||+|||||||++||++++|++++.|++.+.
T Consensus 471 gDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~ 550 (639)
T PLN02829 471 KDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNH 550 (639)
T ss_pred CChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHcc
Confidence 99999999999999999999999888899999999999988899999999999999999999999999999999999988
Q ss_pred CcccccCCCCchhhhhhccccccccCcceeecCCCCCCCcccccCCCeEEEccCCCCCcccCCccchHHHHHHHhccCcc
Q 006413 558 DRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQL 637 (646)
Q Consensus 558 ~~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~~~ 637 (646)
++.+|++|+||+++++|+|++++||++||++|+||++.+.++.+++|+||||+|++|||.+.++++|+++|.+|++++++
T Consensus 551 ~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLGy~~~v~~~~i~~aaIIHynG~~KPWle~~i~~yr~lW~kYl~~~~~ 630 (639)
T PLN02829 551 DRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLGYNPNVNQRDIERAAVIHYNGNMKPWLEIGIPKYRNYWSKYVDYDQV 630 (639)
T ss_pred CCccccccCCChHHHHhcCceEecChhheecCCCCCcccchhcccCCeEEEECCCCCccccCCcccchHHHHHHHhcCch
Confidence 88899999999999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred hhhhccCCC
Q 006413 638 YLRECNINP 646 (646)
Q Consensus 638 fl~~cni~~ 646 (646)
|||+|||||
T Consensus 631 fl~~Cni~p 639 (639)
T PLN02829 631 YLRECNINP 639 (639)
T ss_pred HHHhCCCCC
Confidence 999999998
No 2
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=8.3e-150 Score=1234.97 Aligned_cols=583 Identities=45% Similarity=0.841 Sum_probs=537.2
Q ss_pred CchhhHHHHHHHHHhhhheeeeeccccccCCCCccchhhhhhhhhccccCCCccccccccCccccccccCCe-EEEeccc
Q 006413 1 MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPI-LVISDKI 79 (646)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (646)
|+.|++||+||||||+|||+|||+||+++ +|++|+||+|||+++++++|+.+||+||||+++ +||||+ |||+|++
T Consensus 6 ~~~r~~~~~~l~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~lk~~~~~~~~~~~ 81 (603)
T PLN02718 6 RWQRILILSLLSLSVFAPLIFVSNRLKSI--TPVGRKEFIEELSTIRYRTDDLRLSAIEQEEGE--GLKGPKLVIYQDGD 81 (603)
T ss_pred HHHHHHHHHHHHHHHhhceeEeecccccc--CccchhhhHHHHhhhccccCccccccccccccc--cccCceeEEeecCC
Confidence 56899999999999999999999999997 999999999999999999999999999999999 999999 9999998
Q ss_pred ccccc-c------ccc---cccCccccccccceeccccCCCCCCCCCcccccccchhhhhccccchhhhhhccccccccc
Q 006413 80 AQHSA-H------SQS---QSQGSWEHKSARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHH 149 (646)
Q Consensus 80 ~~~~~-~------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (646)
+++.. . .++ ++++.+||| +| +++.+|.|+|..+.++.. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~------------~~~~~~~~~~~~~~~~~~------------------~ 130 (603)
T PLN02718 82 FNSVVSYNSSDKNNDSLESEVDGGNNHK-PK------------EEQAQVSQKTTVSSSEEV------------------Q 130 (603)
T ss_pred cCccccccccccccchhhhhccCccccc-cc------------hhcccchheeeccccccc------------------c
Confidence 77521 1 124 899999999 55 678899999875544221 1
Q ss_pred cccccccccccccccccccccCCccccccccccCCCCCchhHHHHhhhhHHHHHhhccccccCCchHHHHHHHHHHHHHH
Q 006413 150 SQILDTKHQQESSLTYGVLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQ 229 (646)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~ 229 (646)
++..++...+++++++ ++...++++|+++++|+|++||+|||||||||||++|||++||++|+||||+||||+|
T Consensus 131 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~d~~v~~~~dql~~ak~y~~~a~~~~~~~~~~el~~~i~e~~ 204 (603)
T PLN02718 131 ISARDIQLNHKTQFNP------PTVKHEKNTRVQPRRATDEKVKEIRDKIIQAKAYLNLAPPGSNSQLVKELRLRTKELE 204 (603)
T ss_pred cchhhhhhhhhhccCC------CcccccccCcCCcccCcHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 1113333444444433 4556699999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCChhHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccc
Q 006413 230 RALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCL 309 (646)
Q Consensus 230 ~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL 309 (646)
|+||+|+.|+|||+++.++|++|+++|++||+++|||++|++|||||++++||++++||+|++|++||||+|+|||||||
T Consensus 205 ~~l~~~~~d~~lp~~~~~~~~~m~~~~~~a~~~~~d~~~~~~klr~~~~~~e~~~~~~~~q~~~~~~laa~~~PK~lhCL 284 (603)
T PLN02718 205 RAVGDATKDKDLSKSALQRMKSMEVTLYKASRVFPNCPAIATKLRAMTYNTEEQVRAQKNQAAYLMQLAARTTPKGLHCL 284 (603)
T ss_pred HHHhcccCCCCCCHhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhcCCccCCCCCCCcCCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhC
Q 006413 310 PLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLAN 389 (646)
Q Consensus 310 ~~rlt~ey~~~~~~~~~~p~~~~l~d~~~iHIa~~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n 389 (646)
+||||+|||.+++.++++|++++++||+.+|||+++||++++||+|+|++.|+.+|++++||||||++++++|+.||..+
T Consensus 285 ~~rLt~ey~~~~~~~~~~~~~~~l~d~~~~Hia~~sDNvlaasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~ 364 (603)
T PLN02718 285 SMRLTAEYFALDPEKRQLPNQQRYNDPDLYHYVVFSDNVLACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLN 364 (603)
T ss_pred chhhHHHHhhCChhhccCCChhhccCCcceeEEEEcCCceeEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEeccchhhcccccchhhhhhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEE
Q 006413 390 PPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLF 469 (646)
Q Consensus 390 ~~~~atI~v~nie~F~~l~~~y~p~L~ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLY 469 (646)
+..+++|+|+++++|.|++.+|+++++++++ .+++|+|+++|+||+||++||+++||||
T Consensus 365 ~~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s---------------------~~~~~~S~~~y~Rl~ipellp~l~KvLY 423 (603)
T PLN02718 365 PPGKATIQILNIDDMNVLPADYNSLLMKQNS---------------------HDPRYISALNHARFYLPDIFPGLNKIVL 423 (603)
T ss_pred CCCCcEEEEEecchhccccccchhhhhhccc---------------------cccccccHHHHHHHHHHHHhcccCEEEE
Confidence 8889999999999999999999887765542 3468999999999999999999999999
Q ss_pred EecCeeeccCchhhhccCCCCCeeeeeccccc---cccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHH
Q 006413 470 LDDDVVVQKDLSGLWSIDLKGKVNGAVETCGE---TFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNIT 546 (646)
Q Consensus 470 LDsDvIV~~DLseLw~iDL~gkviAAVeDc~~---~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit 546 (646)
||+|+||++||++||++||+|+++|||+||.. .++++..|++|++|++..+|+++.||||+|||||||++||+++++
T Consensus 424 LD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~~CyfNsGVlLIDLk~WReenIT 503 (603)
T PLN02718 424 FDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPKACTWAFGMNLFDLEEWRRQKLT 503 (603)
T ss_pred EECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCCccccccceEEEeHHHHHhcChH
Confidence 99999999999999999999999999999976 345667789999999888999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcccccCCCCchhhhhhccccccccCcceeecCCCCCCCcccccCCCeEEEccCCCCCcccCCccchHH
Q 006413 547 DVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRN 626 (646)
Q Consensus 547 ~k~~~~~k~n~~~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~ 626 (646)
++++.|++.+.++.+|+||+||+++++|+|++++||++||++++||++.+....+++|+||||+|++|||++.+++.|++
T Consensus 504 e~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~gLG~~~~i~~~~i~~aaIIHYnG~~KPWle~~i~~yr~ 583 (603)
T PLN02718 504 SVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRWHVLGLGHESGVGASDIEQAAVIHYDGVMKPWLDIGIGKYKR 583 (603)
T ss_pred HHHHHHHHhccCccccCcccccHHHHHhcCceeecChHHhccCccccccccccccCCCEEEEECCCCCccccCChhhHHH
Confidence 99999999887778999999999999999999999999999999998877767788999999999999999999999999
Q ss_pred HHHHHhccCcchhhhccCC
Q 006413 627 YWTKHVDYDQLYLRECNIN 645 (646)
Q Consensus 627 lW~kY~~~~~~fl~~cni~ 645 (646)
+|.+|++++++|||+||||
T Consensus 584 ~W~k~v~~~~~~l~~Cn~~ 602 (603)
T PLN02718 584 YWNIHVPYHHPYLQQCNIH 602 (603)
T ss_pred HHHhhcCCCChHHHhcCCC
Confidence 9999999999999999997
No 3
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=5.5e-133 Score=1097.45 Aligned_cols=462 Identities=60% Similarity=1.090 Sum_probs=448.6
Q ss_pred CCCCchhHHHHhhhhHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhccCC
Q 006413 184 QTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQ 263 (646)
Q Consensus 184 ~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~~~~ 263 (646)
-++|+|++||+|||||||||||++|||++||++|+|||+++|||+||+||+|++|+|||+++.++|++|+++|++||+++
T Consensus 191 ~~~~~d~~vk~lkDQl~~AkaY~~iak~~~~~~l~~eL~~~i~e~~r~ls~a~~d~dlp~~~~~k~~~M~~~l~~ak~~~ 270 (657)
T PLN02910 191 ESPNSDSILKLMRDQIIMAKAYANIAKSNNVTNLYVSLMKQFRENKRAIGEATSDAELHSSALDQAKAMGHVLSIAKDQL 270 (657)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhcccccccCchHHHHHHHHHHHHHHHHhcc
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccccccchhhhcCCccCCCCCCCcCCCCCCceEEEE
Q 006413 264 DDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYAL 343 (646)
Q Consensus 264 ~d~~~~~~kl~~~l~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~~~p~~~~l~d~~~iHIa~ 343 (646)
|||++|++||||||+++||++++||+|++||+||||+|+|||||||+||||+|||.+++.++++|++++++||+++|||+
T Consensus 271 ~d~~~~~~KLraml~~~Ee~~~~~k~qs~~l~qlaa~t~PK~lHCL~mRLt~Ey~~~~~~~~~~p~~~~l~dp~l~Hy~i 350 (657)
T PLN02910 271 YDCHTMARKLRAMLQSTERKVDALKKKSAFLIQLAAKTVPKPLHCLPLQLAADYFLLGFQNKDYVNKKKLEDPSLYHYAI 350 (657)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchhhHHHHHhCchhhccCCChhhccCCcceeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhhhhccccc
Q 006413 344 FSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSM 423 (646)
Q Consensus 344 ~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~ql~s~~~ 423 (646)
|||||+|++|||||++.|+++|+++|||||||++||.+|++||+.||+++++|+|+|+|+|+|++.+|+|+|+|+++..+
T Consensus 351 fSDNVLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM~~WF~~n~~~~A~V~V~nie~f~wln~~~~pvl~qles~~~ 430 (657)
T PLN02910 351 FSDNVLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKMWFIINPPAKATIQVENIDDFKWLNSSYCSVLRQLESARI 430 (657)
T ss_pred EecceeeEEeehhhhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEeehhhcccccccccHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecccccCC----CCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeeccc
Q 006413 424 IDYYFRAHRANS----DSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETC 499 (646)
Q Consensus 424 ~~~~F~~~~~~~----~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVeDc 499 (646)
+.|||..+...+ ..++++|+|+|+|+++|+|||||++||+++||||||+||||++||++||++||+|+++|||+||
T Consensus 431 ~~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc 510 (657)
T PLN02910 431 KEYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETC 510 (657)
T ss_pred hhhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEeccc
Confidence 999998654322 2478999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhhhhccccc
Q 006413 500 GETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTY 579 (646)
Q Consensus 500 ~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll~F~g~i~ 579 (646)
...|+++..|++|++|.+...|+++.||||+|||||||++||++++|+.++.|++.+.+..+|++|+||+++++|+|+++
T Consensus 511 ~~~f~r~~~ylnfs~P~i~~yFNs~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~ 590 (657)
T PLN02910 511 KESFHRFDKYLNFSNPKISENFDPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTY 590 (657)
T ss_pred chhhhhhhhhhccCChhhhhccCCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCcee
Confidence 98888999999999999988999999999999999999999999999999999999988899999999999999999999
Q ss_pred cccCcceeecCCCCCCCcccccCCCeEEEccCCCCCcccCCccchHHHHHHHhccCcchhhhccCC
Q 006413 580 PLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 645 (646)
Q Consensus 580 ~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~~~fl~~cni~ 645 (646)
+||++||++|+||++.+....+++|+||||+|++|||.+.++++|+++|.+|++++++||++|||+
T Consensus 591 pLD~rWNv~GLGyd~~v~~~~i~~AAVLHynG~~KPWl~l~i~~Yr~~W~kYl~~d~~fl~~Cni~ 656 (657)
T PLN02910 591 PLDRSWHVLGLGYDPALNQTEIENAAVVHYNGNYKPWLDLAIAKYKPYWSRYVQYDNPYLQLCNIS 656 (657)
T ss_pred ecCchheecCCCCCcccccccccCcEEEEeCCCCCcccccCcccchHHHHHHccCCChHHHhCCCC
Confidence 999999999999998887788999999999999999999999999999999999999999999997
No 4
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=3.1e-129 Score=1060.27 Aligned_cols=464 Identities=51% Similarity=0.906 Sum_probs=446.5
Q ss_pred cCCCCCchhHHHHhhhhHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCCCCCC--ChhHHHHHHHHHHHHHhh
Q 006413 182 TEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDL--PRIANDRLKAMEQSLAKG 259 (646)
Q Consensus 182 ~~~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~d~~l--~~~~~~~~~~m~~~~~~~ 259 (646)
++..+++|++||+|||||||||||++|||++||++|+|||+++|||+||+||+|+.|+++ |+++.++|++|+++|++|
T Consensus 66 ~~~~~~~~~~~~~l~dql~~Ak~y~~ia~~~~~~~l~~el~~~i~e~~~~l~~a~~d~~~~~~~~~~~~~~~m~~~i~~a 145 (534)
T PLN02742 66 TEEMLSATSFSRQLADQITLAKAYVVIAKEHNNLQLAWELSAQIRNCQLLLSKAATRGEPITVEEAEPIIRDLAALIYQA 145 (534)
T ss_pred hhhhcChHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHH
Confidence 333588999999999999999999999999999999999999999999999999999887 379999999999999999
Q ss_pred ccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccccccchhhhcCCccCC---CCCCCcCCCCC
Q 006413 260 KQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQR---HFPNQEKLEDP 336 (646)
Q Consensus 260 ~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~---~~p~~~~l~d~ 336 (646)
|+++|||+++++|||||++++|||+++|++|++|++||||+|+|||||||+||||+|||.+++.++ +.|+.++++||
T Consensus 146 k~~~~d~~~~~~klr~~l~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~ 225 (534)
T PLN02742 146 QDLHYDSATTIMTLKAHIQALEERANAATVQSTKFGQLAAEALPKSLYCLGVRLTTEWFKNPKLQRKAEEKRNSPRLVDN 225 (534)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchHhHHHHHhCchhhhccccccccccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999998854 34567899999
Q ss_pred CceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhh
Q 006413 337 RLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLK 416 (646)
Q Consensus 337 ~~iHIa~~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~ 416 (646)
+++|||+||||++|++||||||+.|+++|+++|||||||+.++.+|++||..|++++++|+|+++++|+|++.+|+|+|+
T Consensus 226 ~l~Hy~ifSdNvlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pvl~ 305 (534)
T PLN02742 226 NLYHFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPVLK 305 (534)
T ss_pred CcceEEEEeccchhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEeccccccccccchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeee
Q 006413 417 QLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAV 496 (646)
Q Consensus 417 ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAV 496 (646)
|++++.++.|||.++..+...+.++++|+|+|+++|+|||||++||+++||||||+|+||++||++||++||+|+++|||
T Consensus 306 ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAV 385 (534)
T PLN02742 306 QLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAV 385 (534)
T ss_pred HhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEe
Confidence 99999999999988775555677889999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhhhhcc
Q 006413 497 ETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWK 576 (646)
Q Consensus 497 eDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll~F~g 576 (646)
+||+..+++|.+|+||++|.++.+|+++.||||+|||||||++||++++|+.++.|++.+.+..+|++|+||+++++|+|
T Consensus 386 edC~~~f~ry~~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g 465 (534)
T PLN02742 386 ETCLETFHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYG 465 (534)
T ss_pred CchhhhhhhhhhhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcC
Confidence 99998899999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred ccccccCcceeecCCCCCCCcccccCCCeEEEccCCCCCcccCCccchHHHHHHHhccCcchhhhccCC
Q 006413 577 RTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 645 (646)
Q Consensus 577 ~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~~~fl~~cni~ 645 (646)
++++||.+||+.|+||++.++...+++|+||||+|++|||.+.++++|+++|++|++++++|+++||||
T Consensus 466 ~~~~LD~rWNv~gLG~~~~v~~~~i~~aaILHynG~~KPWl~~~i~~yr~~W~kYl~~s~~fl~~Cni~ 534 (534)
T PLN02742 466 LTEPLDRRWHVLGLGYDTNIDPRLIESAAVLHFNGNMKPWLKLAIERYKPLWERYVNYSHPYLQQCNFH 534 (534)
T ss_pred cceecChhheecccccccccchhhccCCeEEEECCCCCcccccCCcccchHHHHHHccCCHHHHhCCCC
Confidence 999999999999999998887788999999999999999999999999999999999999999999996
No 5
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=2.9e-125 Score=1044.08 Aligned_cols=453 Identities=43% Similarity=0.756 Sum_probs=424.8
Q ss_pred CCCCCchhHHHHhhhhHHHHHhhc-cccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhcc
Q 006413 183 EQTTPPDFRVRQLKDQLIKAKVYL-SLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQ 261 (646)
Q Consensus 183 ~~~~~~d~~~~~~~dq~~~a~~y~-~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~~ 261 (646)
-.++|+|++||+|||||||||||+ +|||++||++|+||||+||||+||+||||+.|+|||+++.++|++|+++|++||+
T Consensus 174 ~~~~~~d~~~~~l~Dql~~Ak~y~~~iak~~~~~~l~~el~~~i~e~~~~l~~~~~d~dlp~~~~~~~~~m~~~~~~ak~ 253 (629)
T PLN02769 174 HKEVMKDSIVKRLKDQLFVARAYYPSIAKLPGQEKLTRELKQNIQEHERVLSESITDADLPPFIQKKLEKMEQTIARAKS 253 (629)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHhhccccccCChhHHHHHHHHHHHHHHHHh
Confidence 336899999999999999999996 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccccccchhhhcCCccCCCCCCCcCCCCCCceEE
Q 006413 262 IQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHY 341 (646)
Q Consensus 262 ~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~~~p~~~~l~d~~~iHI 341 (646)
++|||.+|++||||||++||||+++|++|++||+||||+|+|||||||+||||+|||.+++.++++|++++++||+++||
T Consensus 254 ~~~dc~~~~~klr~~l~~~E~~~~~~~kq~~~l~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~l~d~~l~Hy 333 (629)
T PLN02769 254 CPVDCNNVDRKLRQILDMTEDEAHFHMKQSAFLYQLGVQTMPKSHHCLSMRLTVEYFKSSSLDMEDSNSEKFSDPSLRHY 333 (629)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccchhhHHHHHhCchhhccCCchhhccCCccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhhhhccc
Q 006413 342 ALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQ 421 (646)
Q Consensus 342 a~~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~ql~s~ 421 (646)
|+||||++|++||||||+.|+++|+++|||||||++++.+|++||+.|++++|+|+|+|+|+|+|.+. .+|+++|+++.
T Consensus 334 ~ifSdNvlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~~~~-~~~~~~~l~~~ 412 (629)
T PLN02769 334 VIFSKNVLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDL-DKFALKQLSLP 412 (629)
T ss_pred EEEeccceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeeeeccc-chHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999664 58999999988
Q ss_pred cceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeeccccc
Q 006413 422 SMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGE 501 (646)
Q Consensus 422 ~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVeDc~~ 501 (646)
+.++++|..+... ..+.++|+|+|+++|+|||||++||+++||||||+||||++||++||++||+|+++|||+||..
T Consensus 413 ~~~~~~~~~~~~~---~~~~~~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~ 489 (629)
T PLN02769 413 EEFRVSFRSVDNP---SSKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGV 489 (629)
T ss_pred hhhhhhhccCCCC---chhccCcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhh
Confidence 8888888665432 2355679999999999999999999999999999999999999999999999999999999976
Q ss_pred cccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHc-C-CcccccCCCCchhhhhhccccc
Q 006413 502 TFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMN-H-DRQLWKLGTLPPGLITFWKRTY 579 (646)
Q Consensus 502 ~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n-~-~~~l~dqg~Ln~~ll~F~g~i~ 579 (646)
.+.++..|++ ..+|+++.||||+|||||||++||+++++++++.|++.+ . +...|++|+||++|++|+|+++
T Consensus 490 rl~~~~~yl~------~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~ 563 (629)
T PLN02769 490 RLGQLKNYLG------DTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIY 563 (629)
T ss_pred hhhhhhhhhc------ccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEE
Confidence 5555555543 236888899999999999999999999999999998765 3 3567999999999999999999
Q ss_pred cccCcceeecCCCCCCCcccccCCCeEEEccCCCCCcccCCccchHHHHHHHhccCcchhhhccCC
Q 006413 580 PLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 645 (646)
Q Consensus 580 ~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~~~fl~~cni~ 645 (646)
+||.+||++++||++.+..+.+++|+||||+|+.|||++.+.++|+++||+|++++++|||+||||
T Consensus 564 ~LD~rWNv~gLG~~~~i~~~~i~~paIIHYnG~~KPW~e~~i~~yr~~W~kYl~~~~~fl~~Cni~ 629 (629)
T PLN02769 564 PLDDRWVLSGLGHDYGIDEQAIKKAAVLHYNGNMKPWLELGIPKYKKYWKRFLNRDDRFMDECNVN 629 (629)
T ss_pred ECCHHHccccccccccccccccCCcEEEEECCCCCCccCCCCChHHHHHHHHhccCChHHhhCCCC
Confidence 999999999999988877777889999999999999999999999999999999999999999997
No 6
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=8e-110 Score=906.31 Aligned_cols=424 Identities=47% Similarity=0.855 Sum_probs=391.8
Q ss_pred CchHHHHHHHHHHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006413 213 NNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTL 292 (646)
Q Consensus 213 ~~~~~~~el~~~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~ 292 (646)
...++.+||.+-+.|. .-+||+.|++||+++.++|+ +|++.+|||+++++|||||++++|||++++|+|++
T Consensus 87 ~~~~~~~~~~~~l~~~--~~~~~~~d~~lp~s~~~~~~-------~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~ 157 (533)
T PLN02870 87 DSERLVRDFYKILNEV--NTEEIPDGLKLPDSFSQLVS-------DMKNNHYDAKTFAFVLRAMMEKFERELRESKFAEL 157 (533)
T ss_pred chhhhHHHHHHHHHHh--ccccccccccCChhHHHHHH-------HHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3347999999888884 57789999999998777666 77889999999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccccccccchhhhcCCccCCCCCCCc---CCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEE
Q 006413 293 FLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHV 369 (646)
Q Consensus 293 ~~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~~~p~~~---~l~d~~~iHIa~~sDnvlaasVvInSil~N~~~pe~iv 369 (646)
|++||||+|+|||||||+||||+|||.++..++++|+++ +++||+++|||++||||+|++|||||++.|+++|+++|
T Consensus 158 ~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~e~~~~l~dp~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~V 237 (533)
T PLN02870 158 MNKHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPSPELLPVLSDNSYHHFVLSTDNILAASVVVSSTVQSSLKPEKIV 237 (533)
T ss_pred HHHHHHHhhcCCCccccchhhHHHHHhCchhhhcCCcccccccccCCcceeEEEEecceeEEEeeeehhhhcccCccceE
Confidence 999999999999999999999999999998888888765 89999999999999999999999999999999999999
Q ss_pred EEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhhhhccccceEEEe-cccccC---C-------CCc
Q 006413 370 FHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYF-RAHRAN---S-------DSN 438 (646)
Q Consensus 370 FHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~ql~s~~~~~~~F-~~~~~~---~-------~~~ 438 (646)
||||||++|+.+|++||++||+++|+|+|+++|+|+||+.+|+|+|+|+++..++.++| .++... + ..+
T Consensus 238 FHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (533)
T PLN02870 238 FHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFASK 317 (533)
T ss_pred EEEecCccccHHHHHHHhhCCCccceEEEEehhhccccccccchHHHHHhhhHHHHHHhhcccccccccccccchhhhcc
Confidence 99999999999999999999999999999999999999999999999999988765544 333321 1 136
Q ss_pred cccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeecccccc-----ccccccccccC
Q 006413 439 LKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGET-----FHRFDRYLNFS 513 (646)
Q Consensus 439 lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVeDc~~~-----~~r~~~yLnfs 513 (646)
+++++|+|+|+++|+|||||++||+++||||||+||||++||++||++||+|+++|||+||... ++++..|+||+
T Consensus 318 l~~~~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs 397 (533)
T PLN02870 318 LQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFS 397 (533)
T ss_pred cccCCccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccc
Confidence 7889999999999999999999999999999999999999999999999999999999999642 35677899999
Q ss_pred CcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcC--CcccccCCCCchhhhhhccccccccCcceeecCC
Q 006413 514 NPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH--DRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLG 591 (646)
Q Consensus 514 ~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~--~~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~lg 591 (646)
+|.+..+|+++.||||||||||||++||++++++++++|++.+. +..+||||+||++|++|+|++++||.+||++++|
T Consensus 398 ~p~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLg 477 (533)
T PLN02870 398 HPLIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLG 477 (533)
T ss_pred cchhhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCCC
Confidence 99999999999999999999999999999999999999998764 3478999999999999999999999999999999
Q ss_pred CCCCCcccccCCCeEEEccCCCCCcccCCccchHHHHHHHhccCcchhhhccCC
Q 006413 592 YNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 645 (646)
Q Consensus 592 y~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~~~fl~~cni~ 645 (646)
|++....+.+++|+||||+|++|||++.+.++|+.+|.+|++++++|+++|||+
T Consensus 478 y~~~~~~~~i~~aaIIHY~G~~KPW~~~~~~~yr~~W~kYl~~s~~fl~~Cni~ 531 (533)
T PLN02870 478 YQSKTNIESVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIRNCHIL 531 (533)
T ss_pred CcccccccccCCcEEEEECCCCCCccccCccchhHHHHHHHccCchHhhhcCCC
Confidence 987766677889999999999999999999999999999999999999999997
No 7
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=5.2e-108 Score=894.44 Aligned_cols=458 Identities=50% Similarity=0.911 Sum_probs=414.8
Q ss_pred chhHHHHhhhhHHHHHhhccccc---cCC--chHHHHHHHHHHHHHHH------hhccc--CCC----CCCChhHHHHHH
Q 006413 188 PDFRVRQLKDQLIKAKVYLSLPA---MRN--NANFVRELRLRIKEVQR------ALGDA--TKD----SDLPRIANDRLK 250 (646)
Q Consensus 188 ~d~~~~~~~dq~~~a~~y~~~a~---~~~--~~~~~~el~~~~~e~~~------~~~~~--~~d----~~l~~~~~~~~~ 250 (646)
-|.+.|+-.|-..++-||.+.|. +.+ +.++-.||..+.-++.. ++++. +.| .+||+++.++||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 159 (559)
T PLN02523 80 LDQIRKQADDHRTLVNAYAAYARKLKLDNSKLLRLFADLSRNFTDLISKPSYRALLSSDGSAIDEDVLRQFEKEVKERVK 159 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhHHHHhhcCccccccccccCCcCchHHHhhcchhHHHHHH
Confidence 48899999999999999987773 111 12333456666555432 11111 111 348999999999
Q ss_pred HHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccccccchhhhcCCccCCC--CC
Q 006413 251 AMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRH--FP 328 (646)
Q Consensus 251 ~m~~~~~~~~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~~--~p 328 (646)
.|+++|++||+ .|||.++++|||+|++++|||++++|+|++|++||||+|+|||||||+||||+|||.+++.+++ .|
T Consensus 160 ~~~~~~~~a~~-~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~ 238 (559)
T PLN02523 160 VARQMIAESKE-SFDNQLKIQKLKDTIFAVNEQLTKAKKNGAFASLIAAKSIPKSLHCLAMRLMEERIAHPEKYKDEGKP 238 (559)
T ss_pred HHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHhHHHHHhChHhhhccCCC
Confidence 99999999997 7899999999999999999999999999999999999999999999999999999999877543 45
Q ss_pred CCcCCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcc
Q 006413 329 NQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLN 408 (646)
Q Consensus 329 ~~~~l~d~~~iHIa~~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~ 408 (646)
++++++||+++|||+||||++|++|+|+||+.|+++|++++||||||++++.+|++||..+++.+++|+|++|++|+|++
T Consensus 239 ~~~~l~dp~l~Hy~ifSdNvlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln 318 (559)
T PLN02523 239 PPPELEDPSLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLN 318 (559)
T ss_pred cchhccCCCcceEEEecCcchhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcc
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhhccccceEEEecccccC---CCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhc
Q 006413 409 SSYSPVLKQLNSQSMIDYYFRAHRAN---SDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWS 485 (646)
Q Consensus 409 ~~y~p~L~ql~s~~~~~~~F~~~~~~---~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~ 485 (646)
.+|+|+++|+++++++.+||.++... ...++++++|+|+|+++|+|||||++||+++||||||+||||++||++||+
T Consensus 319 ~~~~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~ 398 (559)
T PLN02523 319 SSYVPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWK 398 (559)
T ss_pred cccchHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHh
Confidence 99999999999999999999865432 124678899999999999999999999999999999999999999999999
Q ss_pred cCCCCCeeeeeccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCC
Q 006413 486 IDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLG 565 (646)
Q Consensus 486 iDL~gkviAAVeDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg 565 (646)
+||+|+++|||+||...+++|..+++|++|.+...|+++.||||+|||||||++||++++|++++.|++.+.+..+|+||
T Consensus 399 iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~Dqd 478 (559)
T PLN02523 399 IDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLG 478 (559)
T ss_pred CcCCCceEEEehhhhhHHHHHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhcccccccccc
Confidence 99999999999999776788888999999998889999999999999999999999999999999898888778899999
Q ss_pred CCchhhhhhccccccccCcceeecCCCCCCCcccccCCCeEEEccCCCCCcccCCccchHHHHHHHhccCcchhhhccCC
Q 006413 566 TLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 645 (646)
Q Consensus 566 ~Ln~~ll~F~g~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~~~fl~~cni~ 645 (646)
+||+++++|+|+|++||.+||++++||++.++.+.+++|+||||+|++|||++.++++|+++|++|++++++|||+|||+
T Consensus 479 aLpp~LivF~gri~~LD~rWNvlglGy~~~i~~~~i~~paIIHYnG~~KPWle~~i~~yr~~W~kYl~~~~~fl~~Cn~~ 558 (559)
T PLN02523 479 TLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVIHFNGNMKPWLDIAMNQFKPLWTKYVDYDMEFVQACNFG 558 (559)
T ss_pred ccchHHHHhcCceEecCchhhccCCccCCCccccccCCCEEEEECCCCCccccCCCCcchHHHHHHHccCCHHHHhCCCC
Confidence 99999999999999999999999999998888888899999999999999999999999999999999999999999999
Q ss_pred C
Q 006413 646 P 646 (646)
Q Consensus 646 ~ 646 (646)
|
T Consensus 559 ~ 559 (559)
T PLN02523 559 L 559 (559)
T ss_pred C
Confidence 7
No 8
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=2.5e-108 Score=897.74 Aligned_cols=422 Identities=41% Similarity=0.768 Sum_probs=387.4
Q ss_pred HHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 006413 224 RIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLP 303 (646)
Q Consensus 224 ~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~~~~~la~~~~P 303 (646)
-.+|++|+|+||+.|+++|+.+.++.+.|+++++++++.+|||+++++|||||++++||+++++|+|++|++||||+|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~am~~~~e~~~~~~~~~~~~~~~laa~t~P 173 (535)
T PLN02867 94 LREELTRALVEAKEQDDGGRGTKGSTESFNDLVKEMTSNRQDIKAFAFRTKAMLLKMERKVQSARQRESIYWHLASHGIP 173 (535)
T ss_pred HHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 34667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccccchhhhcCCccCCCCCCCc---CCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHH
Q 006413 304 KGLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYA 380 (646)
Q Consensus 304 k~lhcL~~rlt~ey~~~~~~~~~~p~~~---~l~d~~~iHIa~~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~ 380 (646)
||||||+||||+|||.++++++++|+++ +++||+++|||+|||||+|++|||||++.|+++|+++|||||||++|+.
T Consensus 174 K~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~VfHvvTD~~ny~ 253 (535)
T PLN02867 174 KSLHCLCLKLAEEYAVNAMARSRLPPPESVSRLTDPSFHHVVLLTDNVLAASVVISSTVQNAANPEKLVFHIVTDKKTYT 253 (535)
T ss_pred CCccccchhhHHHHHhCchhhccCCChhhhhhccCCCcceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccccH
Confidence 9999999999999999999999998765 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCceEEEEeccchhhcccccchhhhhhccccce-EEEeccc-------ccCCCCccccCCCCcchhhhh
Q 006413 381 AMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMI-DYYFRAH-------RANSDSNLKFRNPKYLSILNH 452 (646)
Q Consensus 381 ~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~ql~s~~~~-~~~F~~~-------~~~~~~~lk~r~~~yiS~~ty 452 (646)
+|++||++||+++++|+|+++|+|+|++.+|+|+++++++..++ .++|... ......++++++|+|+|+++|
T Consensus 254 aM~~WF~~n~~~~a~v~V~~~~~f~wl~~~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnY 333 (535)
T PLN02867 254 PMHAWFAINSIKSAVVEVKGLHQYDWSQEVNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNH 333 (535)
T ss_pred HHHHHHhhCCCccceEEEEeehhccccccccccHHHHHHHhhhhhhhhhccccccccccccccccchhhcChhhhhHHHH
Confidence 99999999999999999999999999999999999999876644 2222211 011234678899999999999
Q ss_pred HHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeeccc--ccc---ccccccccccCCcccccCCCCCCCc
Q 006413 453 LRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETC--GET---FHRFDRYLNFSNPLISKNFDPRACG 527 (646)
Q Consensus 453 ~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVeDc--~~~---~~r~~~yLnfs~p~i~~~f~~~~~y 527 (646)
+||+||++||+++||||||+||||++||++||++||+|+++|||.|+ ... .+++..|+||++|.+..+|+++.||
T Consensus 334 lRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~~p~~cY 413 (535)
T PLN02867 334 LRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSNLDQERCA 413 (535)
T ss_pred HHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchhhhccCCCCCcc
Confidence 99999999999999999999999999999999999999999999774 322 2456789999999988899999999
Q ss_pred cccceeecccHHHHHhhHHHHHHHHHHHcCC--cccccCCCCchhhhhhccccccccCcceeecCCCCCCC-cccccCCC
Q 006413 528 WAYGMNIFDLDEWRRQNITDVYHTWQKMNHD--RQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSV-NQRDIERA 604 (646)
Q Consensus 528 FNSGVlLIDL~kWRk~nit~k~~~~~k~n~~--~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~lgy~~~i-~~~~ie~~ 604 (646)
||||||||||++||++++++++++|++.+.. ..+|+||+||+++++|+|+|++||.+||+.++||++.. ..+.+++|
T Consensus 414 FNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~~~~~~~i~~p 493 (535)
T PLN02867 414 WLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPPEVPREILESA 493 (535)
T ss_pred eecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhcccCCCcccccchhhhcCCc
Confidence 9999999999999999999999999998754 46899999999999999999999999999999987642 33456899
Q ss_pred eEEEccCCCCCcccCCccchHHHHHHHhccCcchhhhccCC
Q 006413 605 AVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 645 (646)
Q Consensus 605 ~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~~~fl~~cni~ 645 (646)
+||||+|+.|||+++++++|+++|.+|++++++|+|+|||.
T Consensus 494 aIIHYnG~~KPW~e~~~~~yR~~W~kyl~~~~~fl~~cni~ 534 (535)
T PLN02867 494 AVLHFSGPAKPWLEIGFPEVRSLWYRHVNFSDKFIRKCRIM 534 (535)
T ss_pred EEEEECCCCCcccccCCCchhHHHHHhcCccchHHHhcccC
Confidence 99999999999999999999999999999999999999995
No 9
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=9.9e-108 Score=890.07 Aligned_cols=424 Identities=44% Similarity=0.826 Sum_probs=386.6
Q ss_pred CchHHHHHHHHHHHH-HHHhhcccCCCCCCChhHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006413 213 NNANFVRELRLRIKE-VQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQT 291 (646)
Q Consensus 213 ~~~~~~~el~~~~~e-~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~ 291 (646)
...++.+||.+-+.| .. =.|...|.++|.+ |++++.++++.+|||.+|++|||||++++||+++++|+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~klr~~l~~~E~~~~~~k~~~ 157 (534)
T PLN02659 87 DSANVPEVMYQVLEQPLS--NDELKGRSDIPQT-------LEEFMDEVKNSRSDARAFALKLREMVTLLEQRTRTAKIQE 157 (534)
T ss_pred cccccHHHHHHHHHhhhc--ccccCCccccchH-------HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334677777776666 21 1256677888876 6777777888999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCcccccccccchhhhcCCccCCCCCCCc---CCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcE
Q 006413 292 LFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNH 368 (646)
Q Consensus 292 ~~~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~~~p~~~---~l~d~~~iHIa~~sDnvlaasVvInSil~N~~~pe~i 368 (646)
.++.||||+|+|||||||+||||+|||++++.++++|+++ +++||+++|||+|||||+|++|||||++.|+++|+++
T Consensus 158 ~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~l~Hy~ifSdNvLAasVVvnStv~~a~~p~~~ 237 (534)
T PLN02659 158 YLYRHVASSSIPKQLHCLALRLANEHSTNAAARLQLPLAELVPALVDNSYFHFVLASDNILAASVVANSLVQNALRPHKF 237 (534)
T ss_pred HHHHHHHhhhCCCCccccchhhHHHHHhCchhhhccCCcccccccCCCCcceEEEEecceeEEEeeeehhhhcccCccce
Confidence 8888999999999999999999999999999999988765 7999999999999999999999999999999999999
Q ss_pred EEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhhhhccccceEEEeccccc----CC-------CC
Q 006413 369 VFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRA----NS-------DS 437 (646)
Q Consensus 369 vFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~ql~s~~~~~~~F~~~~~----~~-------~~ 437 (646)
|||||||++||.+|++||+.||+++|+|+|+++|+|+||+++|+|+++|+++..++.++|..+.. ++ ..
T Consensus 238 VFHivTD~~ny~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (534)
T PLN02659 238 VLHIITDRKTYSPMQAWFSLHPLSPAIIEVKALHHFDWFAKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPHVIAA 317 (534)
T ss_pred EEEEecCccccHHHHHHHhhCCCccceEEEEeehhcccccccccHHHHHHhhhhhhhhhhcccccccccccccCcccccc
Confidence 99999999999999999999999999999999999999999999999999998888898875431 11 13
Q ss_pred ccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeecccccc--c---ccccccccc
Q 006413 438 NLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGET--F---HRFDRYLNF 512 (646)
Q Consensus 438 ~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVeDc~~~--~---~r~~~yLnf 512 (646)
++++++|+|+|+++|+|||||++||+++||||||+||||++||++||++||+|+++|||+||... + +++..|++|
T Consensus 318 ~l~~~~p~ylS~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~ 397 (534)
T PLN02659 318 KLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNF 397 (534)
T ss_pred ccccCCccceeHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcc
Confidence 56789999999999999999999999999999999999999999999999999999999999642 2 567788999
Q ss_pred CCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcC--CcccccCCCCchhhhhhccccccccCcceeecC
Q 006413 513 SNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH--DRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGL 590 (646)
Q Consensus 513 s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~--~~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~l 590 (646)
++|.+...|+++.||||+|||||||++||++++++++++|++.+. +..+|+||+||++|++|+|++++||.+||+.++
T Consensus 398 s~p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gL 477 (534)
T PLN02659 398 SHPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGL 477 (534)
T ss_pred cchhhhhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecCC
Confidence 999988899999999999999999999999999999999998763 457799999999999999999999999999999
Q ss_pred CCCCCCcccccCCCeEEEccCCCCCcccCCccchHHHHHHHhccCcchhhhccCC
Q 006413 591 GYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 645 (646)
Q Consensus 591 gy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~~~fl~~cni~ 645 (646)
||++....+.+++|+||||+|++|||+++++++|+++|.+|++++++|+|+|||+
T Consensus 478 g~~~~~~~~~i~~paIIHYnG~~KPW~~~~~~~yr~~W~kYl~~s~~fl~~Cni~ 532 (534)
T PLN02659 478 GYQENTSLADAESAGVVHFNGRAKPWLDIAFPQLRPLWAKYIDSSDKFIKSCHIR 532 (534)
T ss_pred cccccccccccCCcEEEEECCCCCccccccCCcchhHHHHHhccCCHHHHhcCCC
Confidence 9987666667889999999999999999999999999999999999999999996
No 10
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=7.6e-56 Score=455.10 Aligned_cols=255 Identities=56% Similarity=0.998 Sum_probs=229.5
Q ss_pred eEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhhhh
Q 006413 339 FHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQL 418 (646)
Q Consensus 339 iHIa~~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~ql 418 (646)
+|||+++||+++++|+++|++.|+++|.+++|||+||+++.+.|+.||...+..+++|++++++++.+.+..+.+.++|+
T Consensus 1 ~hiv~~~Dn~l~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 80 (257)
T cd06429 1 IHVVIFSDNRLAAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQL 80 (257)
T ss_pred CCEEEEecchhHHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhh
Confidence 69999999989999999999999999999999999999999999999998888899999999998888776666777887
Q ss_pred ccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeecc
Q 006413 419 NSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVET 498 (646)
Q Consensus 419 ~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVeD 498 (646)
++.. ....++.++++++|.++|+||+||++||+++||||||+|+||++||++||++||+|+++|||+|
T Consensus 81 ~~~~------------~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d 148 (257)
T cd06429 81 ESEA------------DTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET 148 (257)
T ss_pred hccc------------cccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh
Confidence 7542 1234556778999999999999999999999999999999999999999999999999999987
Q ss_pred ccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCc--ccccCCCCchhhhhhcc
Q 006413 499 CGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDR--QLWKLGTLPPGLITFWK 576 (646)
Q Consensus 499 c~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~--~l~dqg~Ln~~ll~F~g 576 (646)
|||||||||||++||++++++++++|++.+.+. .++++|+|+++|++|+|
T Consensus 149 ----------------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~ 200 (257)
T cd06429 149 ----------------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYG 200 (257)
T ss_pred ----------------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccC
Confidence 589999999999999999999999999876543 56889999999999999
Q ss_pred ccccccCcceeecCCCCCCCcccccCCCeEEEccCCCCCcccCCccchHHHHHHHhc
Q 006413 577 RTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVD 633 (646)
Q Consensus 577 ~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~ 633 (646)
+++.||.+||++++||+.......+.+|+||||+|+.|||+..+.++|+++||+|++
T Consensus 201 ~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~w~~yl~ 257 (257)
T cd06429 201 LTSPLDPSWHVRGLGYNYGIRPQDIKAAAVLHFNGNMKPWLRTAIPSYKELWEKYLS 257 (257)
T ss_pred eeEECChHHcccCCcccccccccccCCcEEEEECCCCCCcCCCCCChHHHHHHHHhC
Confidence 999999999999888876544455678999999999999999998999999999974
No 11
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=1e-41 Score=362.36 Aligned_cols=258 Identities=17% Similarity=0.236 Sum_probs=186.1
Q ss_pred CCceEEEEEcCc--chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEecc--chhhccccc
Q 006413 336 PRLFHYALFSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIE--EFTWLNSSY 411 (646)
Q Consensus 336 ~~~iHIa~~sDn--vlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie--~F~~l~~~y 411 (646)
++.+|||+++|+ +.+++|+|+|+++|+++ ..+.|||++++++.+.++.+-......+..|.+..++ .|.
T Consensus 23 ~~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~id~~~~~------ 95 (334)
T PRK15171 23 KNSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLINCERLK------ 95 (334)
T ss_pred CCceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeCHHHHh------
Confidence 478999999996 47899999999999876 4799999999999887654432211113344444332 111
Q ss_pred chhhhhhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccC-CCeEEEEecCeeeccCchhhhccCCCC
Q 006413 412 SPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKG 490 (646)
Q Consensus 412 ~p~L~ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~-ldKVLYLDsDvIV~~DLseLw~iDL~g 490 (646)
.++...++|.++|+||+||++||+ ++||||||+|+||++||++||++||+|
T Consensus 96 ----------------------------~~~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~ 147 (334)
T PRK15171 96 ----------------------------SLPSTKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAE 147 (334)
T ss_pred ----------------------------CCcccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCC
Confidence 011235789999999999999995 999999999999999999999999996
Q ss_pred Ceeeee-ccccccc-cccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcC--CcccccCCC
Q 006413 491 KVNGAV-ETCGETF-HRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH--DRQLWKLGT 566 (646)
Q Consensus 491 kviAAV-eDc~~~~-~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~--~~~l~dqg~ 566 (646)
..+||| .|+...+ ......++. | ++ ..+|||||||||||++||++++++++++++..+. .+.. .++
T Consensus 148 ~~~aav~~d~~~~~~~~~~~~l~~--~----~~--~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~--~~D 217 (334)
T PRK15171 148 NEIAAVVAEGDAEWWSKRAQSLQT--P----GL--ASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRIT--HLD 217 (334)
T ss_pred CeEEEEEeccchhHHHHHHHhcCC--c----cc--cccceecceEEEcHHHHHHhhHHHHHHHHHhcccccccee--ecC
Confidence 666665 5543211 111111110 0 11 2469999999999999999999999999997542 2222 234
Q ss_pred CchhhhhhccccccccCcceeecC-CCCCC--CcccccCCCeEEEccCCCCCcccCCccchHHHHHHHhccCcchh
Q 006413 567 LPPGLITFWKRTYPLDRFWHVLGL-GYNPS--VNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYL 639 (646)
Q Consensus 567 Ln~~ll~F~g~i~~Ld~~WN~~~l-gy~~~--i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~~~fl 639 (646)
|+++|.+|.|+|+.||.+||++.. .+... .......+|+||||+|+.|||...+.++++++||+|... +||-
T Consensus 218 QDiLN~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~p~IIHy~G~~KPW~~~~~~~~~~~f~~~~~~-spw~ 292 (334)
T PRK15171 218 QDVLNILLAGKVKFIDAKYNTQFSLNYELKDSVINPVNDETVFIHYIGPTKPWHSWADYPVSQYFLKAKEA-SPWK 292 (334)
T ss_pred hhHHHHHHcCCeEECCHhhCCccchhHHHHhcccccccCCCEEEEECCCCCCCCCCCCCchHHHHHHHHhc-CCCC
Confidence 445567899999999999998742 11110 001123578999999999999988888999999999954 5664
No 12
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=6.2e-40 Score=341.18 Aligned_cols=261 Identities=23% Similarity=0.310 Sum_probs=185.0
Q ss_pred EEEEcCc-chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhhhhc
Q 006413 341 YALFSDN-VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLN 419 (646)
Q Consensus 341 Ia~~sDn-vlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~ql~ 419 (646)
||++.+| +.+++|+|+|+++|+. ..++|||++++++.+.++.+...-...++.|.+..++++. ..+
T Consensus 5 iv~~~~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~---~~~-------- 71 (280)
T cd06431 5 IVCAGYNASRDVVTLVKSVLFYRR--NPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEELK---SRV-------- 71 (280)
T ss_pred EEEccCCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHhh---hhh--------
Confidence 5556677 4789999999999985 3599999999999888777664333456788887764321 000
Q ss_pred cccceEEEecccccCCCCccccCCCCcch-hhhhHHhhhhccccC-CCeEEEEecCeeeccCchhhhcc--CCCC-Ceee
Q 006413 420 SQSMIDYYFRAHRANSDSNLKFRNPKYLS-ILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSI--DLKG-KVNG 494 (646)
Q Consensus 420 s~~~~~~~F~~~~~~~~~~lk~r~~~yiS-~~ty~Rf~IPeiLP~-ldKVLYLDsDvIV~~DLseLw~i--DL~g-kviA 494 (646)
. ..++ .++| .++|+||+||++||+ ++||||||+|+||++||++||++ |+.| +++|
T Consensus 72 -------~------------~~~~-~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a 131 (280)
T cd06431 72 -------S------------WIPN-KHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLG 131 (280)
T ss_pred -------c------------cCcc-cchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEE
Confidence 0 0011 2444 448899999999994 99999999999999999999998 6765 5777
Q ss_pred eeccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCC-cccccCCCCchhhhh
Q 006413 495 AVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHD-RQLWKLGTLPPGLIT 573 (646)
Q Consensus 495 AVeDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~-~~l~dqg~Ln~~ll~ 573 (646)
||+|....+. ... +. ....+.....|||||||||||++||++++++++..+.+.+.. ......++|+++|.+
T Consensus 132 ~v~~~~~~~~---~~~-~~---~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v 204 (280)
T cd06431 132 LVENQSDWYL---GNL-WK---NHRPWPALGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAV 204 (280)
T ss_pred Eeccchhhhh---hhh-hh---ccCCCcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHH
Confidence 7777532111 000 00 000111123599999999999999999999998766654311 111123555556688
Q ss_pred hccc---cccccCcceeecCCCC-CCCcccccCCCeEEEccCCCCCcccCCc-cchHHHHHHHhccCcchhhh
Q 006413 574 FWKR---TYPLDRFWHVLGLGYN-PSVNQRDIERAAVIHYNGNMKPWLEINI-PKYRNYWTKHVDYDQLYLRE 641 (646)
Q Consensus 574 F~g~---i~~Ld~~WN~~~lgy~-~~i~~~~ie~~~IIHY~G~~KPW~~~~~-~~y~~lW~kY~~~~~~fl~~ 641 (646)
|.|+ ++.||++||++..... ......+.++|+||||+|+.|||...+. ++|+++|.+|.+++.+-||+
T Consensus 205 ~~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~p~IIHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~l~~ 277 (280)
T cd06431 205 IKQNPFLVYQLPCAWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRR 277 (280)
T ss_pred HcCCcceeEECCCccccccCccchHhHhhcCcCCCEEEEeCCCCCCCCcCCCChHHHHHHHHHHhcCchhhhh
Confidence 9999 8999999999853111 1111122468999999999999998775 89999999999999887765
No 13
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=1.8e-38 Score=322.30 Aligned_cols=237 Identities=20% Similarity=0.282 Sum_probs=172.9
Q ss_pred eEEEE-EcC-c-chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhh
Q 006413 339 FHYAL-FSD-N-VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVL 415 (646)
Q Consensus 339 iHIa~-~sD-n-vlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L 415 (646)
||||+ ++| + +.+++|+++|+++|+++ .++|||++++++.+..+.+.......+.+++++.++.-.+.
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~-------- 70 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSV-------- 70 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcc--------
Confidence 68877 445 4 47899999999999986 69999999999987665544322223556666654311000
Q ss_pred hhhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeee
Q 006413 416 KQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGA 495 (646)
Q Consensus 416 ~ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAA 495 (646)
... ...++++..+|+||+||+++|+++||||||+|+||++||++||+++++|+++||
T Consensus 71 ----------------------~~~-~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aa 127 (246)
T cd00505 71 ----------------------DSE-HLKRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAA 127 (246)
T ss_pred ----------------------hhh-hhcCccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEE
Confidence 000 012567889999999999999999999999999999999999999999999999
Q ss_pred eccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhhhhc
Q 006413 496 VETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFW 575 (646)
Q Consensus 496 VeDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll~F~ 575 (646)
|+||..... ..+... ..+...+.+|||||||||||++||++++.+++.++...+..... .++|+++|.+|.
T Consensus 128 v~d~~~~~~--~~~~~~-----~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~--~~DQd~LN~~~~ 198 (246)
T cd00505 128 APDPGDRRE--GKYYRQ-----KRSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSLS--GGDQDLLNTFFK 198 (246)
T ss_pred ccCchhhhc--cchhhc-----ccCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccCc--cCCcHHHHHHHh
Confidence 999864211 111000 11233456899999999999999988888887776544333221 244455567899
Q ss_pred cc---cccccCcceeecCCCCCCCc--ccccCCCeEEEccCCCCCcc
Q 006413 576 KR---TYPLDRFWHVLGLGYNPSVN--QRDIERAAVIHYNGNMKPWL 617 (646)
Q Consensus 576 g~---i~~Ld~~WN~~~lgy~~~i~--~~~ie~~~IIHY~G~~KPW~ 617 (646)
++ +..||.+||++..++..... .+...+|+||||+|+.|||.
T Consensus 199 ~~~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~ 245 (246)
T cd00505 199 QVPFIVKSLPCIWNVRLTGCYRSLNCFKAFVKNAKVIHFNGPTKPWN 245 (246)
T ss_pred cCCCeEEECCCeeeEEecCccccccchhhhcCCCEEEEeCCCCCCCC
Confidence 98 99999999999766543211 23467899999999999996
No 14
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=5.4e-38 Score=317.89 Aligned_cols=237 Identities=20% Similarity=0.244 Sum_probs=178.8
Q ss_pred eEEEEEcCc--chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhh
Q 006413 339 FHYALFSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLK 416 (646)
Q Consensus 339 iHIa~~sDn--vlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~ 416 (646)
+|||+++|. ..+++|+++|+++|+++ +.++|||++++++.+.++.....-...+..|.+..++. +...
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~---------~~~~ 70 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDN---------DDFK 70 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCH---------HHHh
Confidence 699999996 46899999999999986 47999999999887654433221111355666665432 0000
Q ss_pred hhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeee
Q 006413 417 QLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAV 496 (646)
Q Consensus 417 ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAV 496 (646)
. .. ....+++.++|+||++|+++|+++||||||+|+||++||++||++|++|+++|||
T Consensus 71 ~---------------------~~-~~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~ 128 (248)
T cd04194 71 F---------------------FP-ATTDHISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAV 128 (248)
T ss_pred c---------------------CC-cccccccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEE
Confidence 0 00 0135678899999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhhhhcc
Q 006413 497 ETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWK 576 (646)
Q Consensus 497 eDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll~F~g 576 (646)
+||......... ...+.....+||||||||+|+++||+.++++++++|++.+.... ..++|+++|.+|.+
T Consensus 129 ~d~~~~~~~~~~--------~~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~--~~~DQd~LN~~~~~ 198 (248)
T cd04194 129 RDPFIEQEKKRK--------RRLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGRL--IYPDQDILNAVLKD 198 (248)
T ss_pred ecccHHHHHHHH--------hhcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCce--eeCChHHHHHHHhC
Confidence 999753221110 01123345789999999999999999999999999998775432 23555666789999
Q ss_pred ccccccCcceeecCCCCCCC--------cccccCCCeEEEccCCCCCcc
Q 006413 577 RTYPLDRFWHVLGLGYNPSV--------NQRDIERAAVIHYNGNMKPWL 617 (646)
Q Consensus 577 ~i~~Ld~~WN~~~lgy~~~i--------~~~~ie~~~IIHY~G~~KPW~ 617 (646)
++..||.+||++...+.... .....++++||||+|+.|||.
T Consensus 199 ~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~ 247 (248)
T cd04194 199 KILYLPPRYNFQTGFYYLLKKKSKEEQELEEARKNPVIIHYTGSDKPWN 247 (248)
T ss_pred CeEEcCcccccchhHhHHhhccchhHHHHHHHhcCCEEEEeCCCCCCCC
Confidence 99999999999875443211 113457899999999999996
No 15
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=3.2e-36 Score=318.10 Aligned_cols=257 Identities=23% Similarity=0.293 Sum_probs=191.7
Q ss_pred ceEEEEEcCc--chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhh-CCC-CCceEEEEeccchhhcccccch
Q 006413 338 LFHYALFSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLA-NPP-GRATVQVQNIEEFTWLNSSYSP 413 (646)
Q Consensus 338 ~iHIa~~sDn--vlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~-n~~-~~atI~v~nie~F~~l~~~y~p 413 (646)
.++||+++|+ .++++|+|.|++.|++. -.+.|||++++++.+.++..-.. .++ ..+.+.+++++.|. .
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~----~--- 73 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFL----D--- 73 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEechhhh----c---
Confidence 5799999996 47899999999999996 37999999999999887665532 222 34444444544331 0
Q ss_pred hhhhhccccceEEEecccccCCCCccccC-CCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCe
Q 006413 414 VLKQLNSQSMIDYYFRAHRANSDSNLKFR-NPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKV 492 (646)
Q Consensus 414 ~L~ql~s~~~~~~~F~~~~~~~~~~lk~r-~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkv 492 (646)
++ ..+.+|.++|+||+||++||+++|+||||+|+||+|||++||.+++++++
T Consensus 74 ---------------------------~~~~~~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~ 126 (325)
T COG1442 74 ---------------------------YPPFTKRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYY 126 (325)
T ss_pred ---------------------------ccccccchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcce
Confidence 01 24678899999999999999999999999999999999999999999999
Q ss_pred eeeeccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhh
Q 006413 493 NGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLI 572 (646)
Q Consensus 493 iAAVeDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll 572 (646)
+|||.|+...... .... ..........|||||||++|++.||+++++++++++++...+... .++|++++.
T Consensus 127 ~aaV~D~~~~~~~--~~~~-----~~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~~--~~DQdiLN~ 197 (325)
T COG1442 127 LAAVRDVFSHYMK--EGAL-----RLEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDLL--YPDQDILNM 197 (325)
T ss_pred EEEEeehhhhhhh--hhhh-----HhhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhccccccC--CccccHHHH
Confidence 9999998642110 0000 000112346799999999999999999999999999876554333 355777778
Q ss_pred hhccccccccCcceeecCCCC-CCC--cccccCCCeEEEccCCCCCcccCCccchH-HHHHHHhccCcchh
Q 006413 573 TFWKRTYPLDRFWHVLGLGYN-PSV--NQRDIERAAVIHYNGNMKPWLEINIPKYR-NYWTKHVDYDQLYL 639 (646)
Q Consensus 573 ~F~g~i~~Ld~~WN~~~lgy~-~~i--~~~~ie~~~IIHY~G~~KPW~~~~~~~y~-~lW~kY~~~~~~fl 639 (646)
+|+|++.+||.+||++...-. ... ....-.+|.|+||+|+.|||...+.+.++ .+|...+. .+||.
T Consensus 198 i~~~~~~~L~~~YN~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~~~~w~~i~~-~~p~~ 267 (325)
T COG1442 198 IFEDRVLELPIRYNAIPYIDSQLKDKYIYPFGDDPVILHYAGPTKPWHSDSSNYPRSHEWHEILA-ETPWK 267 (325)
T ss_pred HHHhhhhccCcccceeehhhhccchhhhccCCCCceEEEecCCCCCCcCccccccHHHHHHHHHh-cCCcc
Confidence 999999999999999963211 110 01223468999999999999999876654 66766664 35554
No 16
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=6.6e-35 Score=289.26 Aligned_cols=245 Identities=24% Similarity=0.381 Sum_probs=163.3
Q ss_pred EEEEEcCc--chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhhh
Q 006413 340 HYALFSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQ 417 (646)
Q Consensus 340 HIa~~sDn--vlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~q 417 (646)
|||+++|. +.+++|+++|+++|++++..++|||++++++.+.++..............+...+. ..++.
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~ 71 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDI---------SMLEE 71 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSG---------GHHH-
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchH---------Hhhhh
Confidence 89999996 47899999999999998779999999999988776655432221111100100000 00000
Q ss_pred hccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeec
Q 006413 418 LNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVE 497 (646)
Q Consensus 418 l~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVe 497 (646)
+ ........+++..+|+||++|++||+++||||||+|+||.+||++||+++++|+.+||++
T Consensus 72 --------~-----------~~~~~~~~~~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~ 132 (250)
T PF01501_consen 72 --------F-----------QFNSPSKRHFSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVE 132 (250)
T ss_dssp --------------------TTS-HCCTCGGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE
T ss_pred --------h-----------hhcccccccccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccc
Confidence 0 001123467889999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhhhhccc
Q 006413 498 TCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKR 577 (646)
Q Consensus 498 Dc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll~F~g~ 577 (646)
|+... . ......+..........+|||+||||+|+++||++++.+++..|++.+... ...++|+.++.+|.++
T Consensus 133 ~~~~~--~---~~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~DQ~~ln~~~~~~ 205 (250)
T PF01501_consen 133 DESFD--N---FPNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMK--LGFPDQDILNIVFYGN 205 (250)
T ss_dssp ----H--H---HHTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT---SSCHHHHHHHHHTTG
T ss_pred cchhh--h---hhhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccc--cCcCchHHHhhhccce
Confidence 93211 1 001111111112334589999999999999999999999999998766542 2346677777899999
Q ss_pred cccccCcceeecCCCCCCC--cccccCCCeEEEccCCCCCcccC
Q 006413 578 TYPLDRFWHVLGLGYNPSV--NQRDIERAAVIHYNGNMKPWLEI 619 (646)
Q Consensus 578 i~~Ld~~WN~~~lgy~~~i--~~~~ie~~~IIHY~G~~KPW~~~ 619 (646)
+..||.+||++..++.... .....++++||||+|..|||...
T Consensus 206 ~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 206 IKPLPCRYNCQPSWYNQSDDYFNPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp EEEEEGGGSEEHHHHHHTHHHHHHHGCC-SEEE--SSS-TTSTT
T ss_pred eEEECchhccccccccccchhhHhhcCCeEEEEeCCCCcCCCCC
Confidence 9999999999976541110 11334689999999999999865
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.98 E-value=1.3e-31 Score=280.55 Aligned_cols=250 Identities=17% Similarity=0.318 Sum_probs=168.5
Q ss_pred eEEEE-EcC-cchhhhHHHHHHHhhcCCCCcEEEEEEeCc-ccHHH---HHHHHhhCCCCCceEEEEeccchhhcccccc
Q 006413 339 FHYAL-FSD-NVLAAAVVVNSTVTHAKHPSNHVFHIVTDR-LNYAA---MRMWFLANPPGRATVQVQNIEEFTWLNSSYS 412 (646)
Q Consensus 339 iHIa~-~sD-nvlaasVvInSil~N~~~pe~ivFHIVtd~-ln~~~---mk~wf~~n~~~~atI~v~nie~F~~l~~~y~ 412 (646)
+|+|+ +++ ++..+-|+|+|++.|+. ..++|||++|+ ...+. ++.|-.... ..+...+..+
T Consensus 1 ~~~~vv~~g~~~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~-~~i~~~i~~I----------- 66 (304)
T cd06430 1 MHLAVVACGERLEETLTMLKSAIVFSQ--KPLRFHIFAEDQLKQSFKEKLDDWPELID-RKFNYTLHPI----------- 66 (304)
T ss_pred CEEEEEEcCCcHHHHHHHHHHHHHhCC--CCEEEEEEECCccCHHHHHHHHHHHHhcc-ceeeeEEEEE-----------
Confidence 57766 444 46679999999999995 46999999998 33322 455532110 1111111111
Q ss_pred hhhhhhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhcc--CCCC
Q 006413 413 PVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSI--DLKG 490 (646)
Q Consensus 413 p~L~ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~i--DL~g 490 (646)
.|..... ..+ +..+++.+|+||++|++||+++||||||+|+||.+||++||++ |++|
T Consensus 67 --------------~~P~~~~-----~~w--s~l~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~ 125 (304)
T cd06430 67 --------------TFPSGNA-----AEW--KKLFKPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNS 125 (304)
T ss_pred --------------ecCccch-----hhh--hhcccHHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCC
Confidence 1111000 011 2356678999999999999999999999999999999999999 9998
Q ss_pred C-eeeeecccccc-ccccccccccCCcccccCCCCCCCccccceeecccHHHHH-----------hhHHHHHHHHHHHcC
Q 006413 491 K-VNGAVETCGET-FHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRR-----------QNITDVYHTWQKMNH 557 (646)
Q Consensus 491 k-viAAVeDc~~~-~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk-----------~nit~k~~~~~k~n~ 557 (646)
+ ++|++++-... ...|. .+ .+.++ ....|||||||+|||++||+ .+++++++.+++.+.
T Consensus 126 ~~~aA~v~e~~~~~~~~~~---~~----~~~~~-~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (304)
T cd06430 126 TQLAAMAPEHEEPNIGWYN---RF----ARHPY-YGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYK 197 (304)
T ss_pred CeEEEEEecccccchhhhh---hh----cccCc-ccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcc
Confidence 6 55555553210 00111 01 01112 12347999999999999999 788999999998776
Q ss_pred CcccccCCCCchhhhhhccc---cccccCcceeecCCCCCCCccc--ccCCCeEEEccCCCCCcccCCccchHHHHHHHh
Q 006413 558 DRQLWKLGTLPPGLITFWKR---TYPLDRFWHVLGLGYNPSVNQR--DIERAAVIHYNGNMKPWLEINIPKYRNYWTKHV 632 (646)
Q Consensus 558 ~~~l~dqg~Ln~~ll~F~g~---i~~Ld~~WN~~~lgy~~~i~~~--~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~ 632 (646)
....| ++|+++|++|+++ ++.||++||++...+.++..++ +.+.++|||++++.| .....+.|+.++.-..
T Consensus 198 ~~l~~--~DQDiLN~v~~~~p~~~~~Lp~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~~~~--~~~~~~~f~~~~~~~~ 273 (304)
T cd06430 198 LKITW--GDQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGSNCKAAEEEGVFILHGNRGVY--HSDKQPAFRAVYEAIR 273 (304)
T ss_pred cCCCC--CCHHHHHHHHcCCCCeEEEcCccccCCccceeecccccccccccceEEEcCCCCC--CCccchHHHHHHHHHH
Confidence 54333 4555566789987 8999999998864433344443 345789999998777 4445566888888887
Q ss_pred ccC
Q 006413 633 DYD 635 (646)
Q Consensus 633 ~~~ 635 (646)
.|+
T Consensus 274 ~~~ 276 (304)
T cd06430 274 EYT 276 (304)
T ss_pred hcc
Confidence 776
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.97 E-value=4.4e-31 Score=270.47 Aligned_cols=231 Identities=16% Similarity=0.180 Sum_probs=156.6
Q ss_pred eEEEE-EcCc--chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhh
Q 006413 339 FHYAL-FSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVL 415 (646)
Q Consensus 339 iHIa~-~sDn--vlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L 415 (646)
|||+. ++|+ ..+++|++.|+++|+. ..++|||++++++.+..+..-......+..++++.++.-.|+..
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~~~l~~~~~~~~~~i~~i~i~~~~~~~~------ 72 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFKEFLPEMAKEYGFEYELVTYKWPRWLHK------ 72 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHHHHhCCceEEEEecChhhhhc------
Confidence 46655 4444 3689999999999985 47999999999997765443322122355666665531111100
Q ss_pred hhhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccC-CCeEEEEecCeeeccCchhhhccCCCCCeee
Q 006413 416 KQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKGKVNG 494 (646)
Q Consensus 416 ~ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~-ldKVLYLDsDvIV~~DLseLw~iDL~gkviA 494 (646)
.+...+ ..++|+|++++++||. ++||||||+|+||.+||++||++||+|+++|
T Consensus 73 -------------------------~~~~~~-~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~A 126 (248)
T cd06432 73 -------------------------QTEKQR-IIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYG 126 (248)
T ss_pred -------------------------ccccch-hHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEE
Confidence 000011 2467899999999995 9999999999999999999999999999999
Q ss_pred eeccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHH---HcCCc-ccccCCCCchh
Q 006413 495 AVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQK---MNHDR-QLWKLGTLPPG 570 (646)
Q Consensus 495 AVeDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k---~n~~~-~l~dqg~Ln~~ 570 (646)
||+||.... +......|.......++ ....|||||||||||++||++++++++.++++ .+..+ ..+|||.||
T Consensus 127 av~d~~~~~-~~~~~~~~~~~~~~~~l-~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN-- 202 (248)
T cd06432 127 YTPFCDSRK-EMDGFRFWKQGYWKSHL-RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPN-- 202 (248)
T ss_pred Eeeccccch-hcccchhhhhhhhhhhc-CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhH--
Confidence 999986421 10000001000001122 23469999999999999999999997776654 33322 345788766
Q ss_pred hhhhccc-cccccCcceeecCCCCCCCcccccCCCeEEEccCC
Q 006413 571 LITFWKR-TYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGN 612 (646)
Q Consensus 571 ll~F~g~-i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~ 612 (646)
.++.++ +++||.+||++..... .+....|.+|||..+
T Consensus 203 -~v~~~~~i~~Lp~~w~~~~~~~~----~~~~~~~~~~~~~~~ 240 (248)
T cd06432 203 -NMQHQVPIFSLPQEWLWCETWCS----DESKKKAKTIDLCNN 240 (248)
T ss_pred -HHhccCCeEECChHHHHHHHHhc----ccccCccceeecccC
Confidence 578775 9999999998742111 123457899999764
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.92 E-value=6.5e-24 Score=215.90 Aligned_cols=219 Identities=16% Similarity=0.119 Sum_probs=147.3
Q ss_pred EEE-EcC-c-chhhhHHHHHHHhhcCCCCcEEEEEE-eCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhh
Q 006413 341 YAL-FSD-N-VLAAAVVVNSTVTHAKHPSNHVFHIV-TDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLK 416 (646)
Q Consensus 341 Ia~-~sD-n-vlaasVvInSil~N~~~pe~ivFHIV-td~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~ 416 (646)
+|. ++| + +.+++|++.|+++|+++ +.+||+ +++++.+.++..... + .+++.++.++. .. .
T Consensus 3 y~t~~~~~~Y~~~a~vl~~SL~~~~~~---~~~~vl~~~~is~~~~~~L~~~----~--~~~~~v~~i~~---~~---~- 66 (240)
T cd02537 3 YVTLLTNDDYLPGALVLGYSLRKVGSS---YDLVVLVTPGVSEESREALEEV----G--WIVREVEPIDP---PD---S- 66 (240)
T ss_pred EEEEecChhHHHHHHHHHHHHHhcCCC---CCEEEEECCCCCHHHHHHHHHc----C--CEEEecCccCC---cc---h-
Confidence 444 344 4 46899999999999874 344544 567887766554322 1 22333322110 00 0
Q ss_pred hhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeee
Q 006413 417 QLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAV 496 (646)
Q Consensus 417 ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAV 496 (646)
.. .....++..+|.||+++++. .++||||||+|+||.+||++||++ +..+||+
T Consensus 67 --------------------~~---~~~~~~~~~~~~kl~~~~l~-~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~ 119 (240)
T cd02537 67 --------------------AN---LLKRPRFKDTYTKLRLWNLT-EYDKVVFLDADTLVLRNIDELFDL---PGEFAAA 119 (240)
T ss_pred --------------------hh---hccchHHHHHhHHHHhcccc-ccceEEEEeCCeeEccCHHHHhCC---CCceeee
Confidence 00 00124566789999999975 699999999999999999999987 6778888
Q ss_pred ccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhhhhcc
Q 006413 497 ETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWK 576 (646)
Q Consensus 497 eDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll~F~g 576 (646)
.|+.. ..|||||||+|+++. ++.+.+.+++..... +..++|..+|.+|.+
T Consensus 120 ~d~~~-----------------------~~~fNsGv~l~~~~~----~~~~~~~~~~~~~~~---~~~~DQdiLN~~~~~ 169 (240)
T cd02537 120 PDCGW-----------------------PDLFNSGVFVLKPSE----ETFNDLLDALQDTPS---FDGGDQGLLNSYFSD 169 (240)
T ss_pred cccCc-----------------------cccccceEEEEcCCH----HHHHHHHHHHhccCC---CCCCCHHHHHHHHcC
Confidence 77531 358999999999965 455666666655443 333555666688999
Q ss_pred c--cccccCcceeecCCCCCCCc-ccccCCCeEEEccCCCCCcccCCcc---------chHHHHHHHh
Q 006413 577 R--TYPLDRFWHVLGLGYNPSVN-QRDIERAAVIHYNGNMKPWLEINIP---------KYRNYWTKHV 632 (646)
Q Consensus 577 ~--i~~Ld~~WN~~~lgy~~~i~-~~~ie~~~IIHY~G~~KPW~~~~~~---------~y~~lW~kY~ 632 (646)
+ +..||.+||++...+..... .....+|+||||+|+.|||...+.. .....||..+
T Consensus 170 ~~~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~w~~~~ 237 (240)
T cd02537 170 RGIWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFIGGDKPWSWWRDPETKEKDDYNELHQWWWDIY 237 (240)
T ss_pred CCCEeECCcceeeehhhhccCchhhcccCCcEEEEEeCCCCCCCCCcCCCcccccchHHHHHHHHHHH
Confidence 9 99999999998643321111 1234579999999999999876543 3566777765
No 20
>PLN00176 galactinol synthase
Probab=99.90 E-value=8e-23 Score=217.13 Aligned_cols=170 Identities=16% Similarity=0.249 Sum_probs=115.9
Q ss_pred hhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeecccccccc--ccccc-----------cccCCcc
Q 006413 450 LNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFH--RFDRY-----------LNFSNPL 516 (646)
Q Consensus 450 ~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVeDc~~~~~--r~~~y-----------Lnfs~p~ 516 (646)
.+|.||.++++. +++||||||+|+||.++|++||+++ +..+|||.||.++.. .+..+ +.| |.
T Consensus 100 i~~tKl~iw~l~-~ydkvlyLDaD~lv~~nid~Lf~~~--~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~w--p~ 174 (333)
T PLN00176 100 INYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTW--PA 174 (333)
T ss_pred hhhhhhhhcccc-ccceEEEecCCEEeecChHHHhcCC--CcceEEEecccccccccccccccccccccchhhccc--hh
Confidence 367799999977 7999999999999999999999884 335899999975321 11111 111 10
Q ss_pred cccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhhhhccccccccCcceeecC-CCCCC
Q 006413 517 ISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGL-GYNPS 595 (646)
Q Consensus 517 i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~l-gy~~~ 595 (646)
. .+. +...||||||||||++.|+.+++.+ ++..+....+ ++|..+|.+|.|+|.+||.+||++.. .+...
T Consensus 175 ~-~g~-~~~~yFNSGVlvinps~~~~~~ll~----~l~~~~~~~f---~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~~ 245 (333)
T PLN00176 175 E-LGP-PPPLYFNAGMFVFEPSLSTYEDLLE----TLKITPPTPF---AEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHP 245 (333)
T ss_pred h-ccC-CCCCeEEeEEEEEEcCHHHHHHHHH----HHHhcCCCCC---CCHHHHHHHHcCcEEECCchhcCchhhhhhCh
Confidence 0 011 2357999999999999999877654 4444433333 44555668999999999999999742 11110
Q ss_pred CcccccCCCeEEEccC-CCCCcccCCcc---------chHHHHHHHhcc
Q 006413 596 VNQRDIERAAVIHYNG-NMKPWLEINIP---------KYRNYWTKHVDY 634 (646)
Q Consensus 596 i~~~~ie~~~IIHY~G-~~KPW~~~~~~---------~y~~lW~kY~~~ 634 (646)
..-..++++||||+| ..|||...+.+ .+.+.||..++-
T Consensus 246 -~~~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 293 (333)
T PLN00176 246 -ENVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYND 293 (333)
T ss_pred -hhcccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhcc
Confidence 011245799999997 57999865432 245678887754
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.70 E-value=1.6e-17 Score=173.08 Aligned_cols=141 Identities=12% Similarity=0.210 Sum_probs=105.2
Q ss_pred cchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeeccccccccccccccccCCcccccCCCCCC
Q 006413 446 YLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRA 525 (646)
Q Consensus 446 yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVeDc~~~~~r~~~yLnfs~p~i~~~f~~~~ 525 (646)
.++. +|.||.++++ ++++||||||+|+||.++|++||+++.. ..+||+. . .
T Consensus 76 ~~~~-~~tKl~~~~l-~~y~kvlyLDaD~l~~~~ideLf~~~~~-~~~Aap~-~-------------------------~ 126 (278)
T cd06914 76 YWAK-SLTKLRAFNQ-TEYDRIIYFDSDSIIRHPMDELFFLPNY-IKFAAPR-A-------------------------Y 126 (278)
T ss_pred cHHH-HHHHHHhccc-cceeeEEEecCChhhhcChHHHhcCCcc-cceeeec-C-------------------------c
Confidence 4444 5999999998 5899999999999999999999998733 3355543 1 0
Q ss_pred CccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhhhhccc-------cccccCc-ceeecCCCCCC--
Q 006413 526 CGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKR-------TYPLDRF-WHVLGLGYNPS-- 595 (646)
Q Consensus 526 ~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll~F~g~-------i~~Ld~~-WN~~~lgy~~~-- 595 (646)
.|||||||||+++.|+.+++++++.+....+. ..+|||.|| .+|.|. +..||.+ ||++...+...
T Consensus 127 ~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~--~~~DQdiLN---~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~~~ 201 (278)
T cd06914 127 WKFASHLMVIKPSKEAFKELMTEILPAYLNKK--NEYDMDLIN---EEFYNSKQLFKPSVLVLPHRQYGLLTGEFREKLH 201 (278)
T ss_pred ceecceeEEEeCCHHHHHHHHHHHHHhcccCC--CCCChHHHH---HHHhCCccccCcceEEcCccccccCChhhcccCH
Confidence 18999999999999999999999887653222 345666655 689999 9999997 99885322100
Q ss_pred ---C-c----------ccccCCCeEEEccCC--CCCcccCC
Q 006413 596 ---V-N----------QRDIERAAVIHYNGN--MKPWLEIN 620 (646)
Q Consensus 596 ---i-~----------~~~ie~~~IIHY~G~--~KPW~~~~ 620 (646)
+ + .+.+.++++|||++. .|||....
T Consensus 202 ~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 202 KSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred HHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 0 0 122357899999986 69998753
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.05 E-value=2.9e-10 Score=134.26 Aligned_cols=254 Identities=19% Similarity=0.241 Sum_probs=166.1
Q ss_pred CceEEEEEcCc--c-hhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccch
Q 006413 337 RLFHYALFSDN--V-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSP 413 (646)
Q Consensus 337 ~~iHIa~~sDn--v-laasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p 413 (646)
+.|||....-. + +-+-++|.|+++|++.| +.|.++-+.++..=.+..--+....+-..++++..+=.|
T Consensus 1180 ~vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNyLSPtFKe~iP~mA~eYnFeyElv~YkWPrW------- 1250 (1470)
T KOG1879|consen 1180 EVINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLSPTFKESIPHMAKEYNFEYELVQYKWPRW------- 1250 (1470)
T ss_pred ceEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcChHHHHHHHHHHHHhCceEEEEEecCchh-------
Confidence 37999775443 2 67999999999999987 999999876663211111111122344445444332222
Q ss_pred hhhhhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccC-CCeEEEEecCeeeccCchhhhccCCCCCe
Q 006413 414 VLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKGKV 492 (646)
Q Consensus 414 ~L~ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~-ldKVLYLDsDvIV~~DLseLw~iDL~gkv 492 (646)
|+|... +-| -+..|--+||.-+||- ++||||.|+|-||..||.||.+.||+|.+
T Consensus 1251 -LhqQ~E-------------------KQR-----iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaP 1305 (1470)
T KOG1879|consen 1251 -LHQQTE-------------------KQR-----IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAP 1305 (1470)
T ss_pred -hhhhhh-------------------hhh-----hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCc
Confidence 222110 001 2356667888889995 99999999999999999999999999999
Q ss_pred eeeeccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHH-HHHHcCC-ccccc-CCCCch
Q 006413 493 NGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHT-WQKMNHD-RQLWK-LGTLPP 569 (646)
Q Consensus 493 iAAVeDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~-~~k~n~~-~~l~d-qg~Ln~ 569 (646)
.|-++-|..+ ..++.|-+|+....+..+ .+..|.-|...|+||+++|+-.-..++.- |.....+ ..+-. .++||.
T Consensus 1306 ygYtPfCdsR-~EMDGyRFWK~GYW~~hL-~grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPN 1383 (1470)
T KOG1879|consen 1306 YGYTPFCDSR-REMDGYRFWKQGYWKKHL-RGRKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPN 1383 (1470)
T ss_pred cccCcccccc-ccccchhHHhhhHHHHHh-ccCccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccc
Confidence 9999999753 235566667655444333 34789999999999999999888888764 3333333 22322 124442
Q ss_pred hhhhhccccccccCcceeecCCCCCCCcccccCCCeEEEccCCCCCcccC----CccchHHHHHHHhc
Q 006413 570 GLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEI----NIPKYRNYWTKHVD 633 (646)
Q Consensus 570 ~ll~F~g~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~----~~~~y~~lW~kY~~ 633 (646)
++...=-|+.||..|-.....++ ....+.+++|--+.+ ||... +..+.-..|..|..
T Consensus 1384 -nm~hqVpIkSLPqeWLWCETWC~----d~skkkAktIDLCnN--P~TKEpKL~~A~Riv~EW~dyD~ 1444 (1470)
T KOG1879|consen 1384 -NMQHQVPIKSLPQEWLWCETWCD----DESKKKAKTIDLCNN--PLTKEPKLDAARRIVSEWTDYDA 1444 (1470)
T ss_pred -cceeecccccCCcchhhhhhhcC----chhhhhchhhhhhcC--ccccchhhHHHhhhcCCCcccch
Confidence 33445578999999877643332 233457888888775 88664 12234455666653
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=97.84 E-value=8.6e-06 Score=85.64 Aligned_cols=89 Identities=20% Similarity=0.248 Sum_probs=54.6
Q ss_pred hhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeeccccc---ccccc---------------------
Q 006413 451 NHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGE---TFHRF--------------------- 506 (646)
Q Consensus 451 ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVeDc~~---~~~r~--------------------- 506 (646)
++.++.+-+.. ++|||+|||+|.||.+++++||+.+ -+-.+|.+|... .|+|.
T Consensus 156 mftKLrVfeqt-EyDRvifLDsDaivlknmDklFd~P--vyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r~~ 232 (368)
T COG5597 156 MFTKLRVFEQT-EYDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMRAA 232 (368)
T ss_pred HhHHHHhhhhh-hhceEEEeccchHHhhhhHHHhcch--hhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccHhh
Confidence 34555555555 6999999999999999999999876 333455555321 12221
Q ss_pred --ccccccC--CcccccCCCC-CCCccccceeecccHHHHH
Q 006413 507 --DRYLNFS--NPLISKNFDP-RACGWAYGMNIFDLDEWRR 542 (646)
Q Consensus 507 --~~yLnfs--~p~i~~~f~~-~~~yFNSGVlLIDL~kWRk 542 (646)
..|+++. ++.+-....| -+-+||||.||++..+.--
T Consensus 233 ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm 273 (368)
T COG5597 233 LYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHM 273 (368)
T ss_pred hccccccccccCCcccccCCCcHhhhhccCceeecchHHHH
Confidence 1344331 1111111112 2568999999999987643
No 24
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=94.28 E-value=0.21 Score=55.38 Aligned_cols=159 Identities=17% Similarity=0.272 Sum_probs=86.5
Q ss_pred CCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCC--eeeeeccccccccccccccccCCcccccCC
Q 006413 444 PKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGK--VNGAVETCGETFHRFDRYLNFSNPLISKNF 521 (646)
Q Consensus 444 ~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gk--viAAVeDc~~~~~r~~~yLnfs~p~i~~~f 521 (646)
+.+++..-+.|=.+- -+|+.+-+.|||+|.||..- -+.+++..+ ..-.+ +.+... -+
T Consensus 179 p~~WaKlpaLR~aM~-~~PeaEWiWWLDsDALImNm---sfelPlery~~~NlVi-------hg~~~~----------l~ 237 (429)
T PLN03182 179 AGFWAKLPLLRKLML-AHPEVEWIWWMDSDALFTDM---TFEIPLEKYEGYNLVI-------HGWDEL----------VY 237 (429)
T ss_pred CcchhHHHHHHHHHH-HCCCceEEEEecCCceeecC---CCCCCHhHcCCcCeee-------ccchhh----------he
Confidence 467777777775553 37899999999999999862 122333211 00011 001100 11
Q ss_pred -CCCCCccccceeecccHHHHHhhHHHHHHHHHHHc-----------------CCcccccCCCCchhhhhh------ccc
Q 006413 522 -DPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMN-----------------HDRQLWKLGTLPPGLITF------WKR 577 (646)
Q Consensus 522 -~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n-----------------~~~~l~dqg~Ln~~ll~F------~g~ 577 (646)
.++-.+.|+|+++|-.-.|--.-+ . .|..+. .++..+..|+|.++...+ ++.
T Consensus 238 ~~kdW~GLNtGsFLIRNcqWSldlL-D---aWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~ 313 (429)
T PLN03182 238 DQKSWIGLNTGSFLIRNCQWSLDLL-D---AWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGD 313 (429)
T ss_pred eccccCccceeeEEEEcCHHHHHHH-H---HHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhcc
Confidence 123357899999998888865322 1 233322 345556666666543222 222
Q ss_pred cccccCcceeecCCCCCCC-------------cccccCCCeEEEccCCCCCcccCCccchHHHHHH
Q 006413 578 TYPLDRFWHVLGLGYNPSV-------------NQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTK 630 (646)
Q Consensus 578 i~~Ld~~WN~~~lgy~~~i-------------~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~k 630 (646)
-.+|...|-+.|. -..+ ...+-.-|-|.||+| .||+...+..+-..-|..
T Consensus 314 kv~le~~y~l~Gy--w~~iv~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~~~y~~~~C~~~ 376 (429)
T PLN03182 314 KVYLENSYYLHGY--WVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGYGDYPVERCLKQ 376 (429)
T ss_pred ceEEeecceeccc--cHHHHHHHHHHHHhcCCCCCCcccceeEeecc-ceecCCCCCcCHHHHHHH
Confidence 3346666665542 1111 011223478999999 799976654344444543
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=93.77 E-value=0.11 Score=51.65 Aligned_cols=144 Identities=17% Similarity=0.081 Sum_probs=74.9
Q ss_pred chhhhhHHhh-hhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeeccccccccccccccccCCcccccCCCCCC
Q 006413 447 LSILNHLRFY-LPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRA 525 (646)
Q Consensus 447 iS~~ty~Rf~-IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVeDc~~~~~r~~~yLnfs~p~i~~~f~~~~ 525 (646)
+..++..|.- +-+++..=--|+|+|+|++..+|..++++ -.+.-+.+..|+.... ......
T Consensus 48 ~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~--~~~~Di~~~~d~~~~~----------------~~~~~~ 109 (212)
T PF03407_consen 48 FQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFE--NPDADILFSSDGWDGT----------------NSDRNG 109 (212)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhc--cCCCceEEecCCCccc----------------chhhcC
Confidence 3445556643 34566543469999999999999999992 1333344444654210 001123
Q ss_pred CccccceeecccHHHHHhhHHHHHHHHHHHcCCc-ccccCCCCchhhhhhc----c-ccccccCcceeecCCCCCC-Ccc
Q 006413 526 CGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDR-QLWKLGTLPPGLITFW----K-RTYPLDRFWHVLGLGYNPS-VNQ 598 (646)
Q Consensus 526 ~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~-~l~dqg~Ln~~ll~F~----g-~i~~Ld~~WN~~~lgy~~~-i~~ 598 (646)
..+|+|++.+--.. ....-+..|.....+. ..+||..++..+..-. + ++..||..--..|.+|-.. ...
T Consensus 110 ~~~n~G~~~~r~t~----~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~~ 185 (212)
T PF03407_consen 110 NLVNTGFYYFRPTP----RTIAFLEDWLERMAESPGCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRDW 185 (212)
T ss_pred CccccceEEEecCH----HHHHHHHHHHHHHHhCCCcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecchh
Confidence 34599999986654 1222333455433222 3356776664332211 1 4555664433333222111 001
Q ss_pred cc---cCCCeEEEccCC
Q 006413 599 RD---IERAAVIHYNGN 612 (646)
Q Consensus 599 ~~---ie~~~IIHY~G~ 612 (646)
.. -..|.+||.++-
T Consensus 186 ~~~~~~~~p~~vH~n~~ 202 (212)
T PF03407_consen 186 AWVPTKNKPYIVHANCC 202 (212)
T ss_pred hhhccccccceEEEcCC
Confidence 11 246899999863
No 26
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=79.77 E-value=5.7 Score=41.79 Aligned_cols=35 Identities=29% Similarity=0.410 Sum_probs=28.4
Q ss_pred HHhhhhccccCCCeEEEEecCeeeccCchhhhccC
Q 006413 453 LRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSID 487 (646)
Q Consensus 453 ~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iD 487 (646)
..=.++-++-..+.||+||+|.|...|++.||+.+
T Consensus 80 ~~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 80 QNKWLALLFSSFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred hhhhhhhhhCCcceEEEEcCCcccccCHHHHhcCc
Confidence 33344556767999999999999999999999863
No 27
>PLN03181 glycosyltransferase; Provisional
Probab=75.23 E-value=12 Score=42.09 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=25.9
Q ss_pred CCcchhhhhHHhhhhccccCCCeEEEEecCeeeccC
Q 006413 444 PKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKD 479 (646)
Q Consensus 444 ~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~D 479 (646)
+..++..-..|=.+ .-+|+.+-+.|||+|.||...
T Consensus 180 p~~WaKipalRaAM-~a~PeAEWfWWLDsDALIMNp 214 (453)
T PLN03181 180 NSYWAKLPVVRAAM-LAHPEAEWIWWVDSDAVFTDM 214 (453)
T ss_pred chhhhHHHHHHHHH-HHCCCceEEEEecCCceeecC
Confidence 45666666666333 228999999999999999865
No 28
>COG4575 ElaB Uncharacterized conserved protein [Function unknown]
Probab=72.00 E-value=15 Score=33.83 Aligned_cols=75 Identities=19% Similarity=0.235 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhccCCccH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 006413 215 ANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDC-AAVVKKLRAMLHSTEEQLRVHKKQT 291 (646)
Q Consensus 215 ~~~~~el~~~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~~~~~d~-~~~~~kl~~~l~~~e~~~~~~~~q~ 291 (646)
.++.-||+.-+.++|.+|..+...+. .++.+.=.+.+..|.+++...-+- ..++.+-|+++..+|+-++.+-=|+
T Consensus 11 ~~l~~el~~L~d~lEevL~ssg~~a~--~e~~~lR~r~~~~Lk~~r~rl~~~~d~v~~~sk~a~~~tD~yV~e~PWq~ 86 (104)
T COG4575 11 DQLLAELQELLDTLEEVLKSSGSLAG--DEAEELRSKAESALKEARDRLGDTGDAVVQRSKAAADATDDYVRENPWQG 86 (104)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchh--hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHcCCchH
Confidence 68899999999999999998876652 245555557788888888776666 7899999999999999998877665
No 29
>PF10819 DUF2564: Protein of unknown function (DUF2564) ; InterPro: IPR020314 This entry contains proteins with no known function.
Probab=65.33 E-value=18 Score=31.73 Aligned_cols=69 Identities=22% Similarity=0.337 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHhhcccC--CCCCCChhHHHHHHHHHHHHHhhccCC--ccHHHHHHHHHHHHHHHHHHHHHHH
Q 006413 219 RELRLRIKEVQRALGDAT--KDSDLPRIANDRLKAMEQSLAKGKQIQ--DDCAAVVKKLRAMLHSTEEQLRVHK 288 (646)
Q Consensus 219 ~el~~~~~e~~~~~~~~~--~d~~l~~~~~~~~~~m~~~~~~~~~~~--~d~~~~~~kl~~~l~~~e~~~~~~~ 288 (646)
+++.-.|+-.|+++|-|+ .|.++-..|...++....-|.+|++.. .|- .+...=.+.|+..|-|++.++
T Consensus 6 kQve~aVetAqkmvG~AT~smdp~~Le~A~qAve~Ar~ql~~a~~~at~lD~-~Fl~~~~~~L~~~eHQL~Eak 78 (79)
T PF10819_consen 6 KQVEMAVETAQKMVGQATMSMDPDQLEHATQAVEDAREQLSQAKSHATGLDE-PFLQQSEQLLDDCEHQLDEAK 78 (79)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHhc
Confidence 678889999999999999 666677788888888888888888665 343 677788888999998887665
No 30
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=64.52 E-value=4.3 Score=42.11 Aligned_cols=23 Identities=26% Similarity=0.453 Sum_probs=12.6
Q ss_pred ccCCCeEEEEecCeeeccCchhh
Q 006413 461 FPRLNKVLFLDDDVVVQKDLSGL 483 (646)
Q Consensus 461 LP~ldKVLYLDsDvIV~~DLseL 483 (646)
+|+.+-|+|||+|.+|..-=-+|
T Consensus 74 ~P~~~wv~~lD~Dali~n~~~~L 96 (239)
T PF05637_consen 74 YPEAEWVWWLDSDALIMNPDFSL 96 (239)
T ss_dssp -TT-SEEEEE-TTEEE-------
T ss_pred CCCCCEEEEEcCCeEEEeccccc
Confidence 48899999999999998754444
No 31
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=57.91 E-value=5 Score=44.47 Aligned_cols=31 Identities=35% Similarity=0.598 Sum_probs=22.6
Q ss_pred hhHHhhhhccccCCCeEEEEecCeeeccCchhhhc
Q 006413 451 NHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWS 485 (646)
Q Consensus 451 ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~ 485 (646)
+..|+.+ ++ ++. =||||+||||.++++.|=+
T Consensus 229 dl~RLA~--Ly-KYG-GvYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 229 DLSRLAL--LY-KYG-GVYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred HHHHHHH--HH-HhC-CEEeeccEEEecccccccc
Confidence 5567665 22 233 2799999999999999863
No 32
>PRK10132 hypothetical protein; Provisional
Probab=57.43 E-value=52 Score=30.43 Aligned_cols=76 Identities=9% Similarity=0.078 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006413 215 ANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTL 292 (646)
Q Consensus 215 ~~~~~el~~~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~ 292 (646)
+++..||+.=+.++|.+|.++..++ -.++.+.=.+.+..|..++....|-..+..+.|.....+++-++.+--++.
T Consensus 15 e~L~~Dl~~L~~~le~ll~~~~~~~--~~~~~~lR~r~~~~L~~ar~~l~~~~~~~~~~~~a~~~~~~~V~~~Pw~sv 90 (108)
T PRK10132 15 QDIQNDVNQLADSLESVLKSWGSDA--KGEAEAARRKAQALLKETRARMHGRTRVQQAARDAVGCADTFVRERPWCSV 90 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 6899999999999999997776554 124444445777788888877667777778889999999999988877764
No 33
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=52.45 E-value=31 Score=37.92 Aligned_cols=149 Identities=13% Similarity=0.064 Sum_probs=72.1
Q ss_pred ccCCCeEEEEecCeeeccCchhhhccCCCCCeeeeeccccc-----ccccccc-ccccCCcc--c---ccCCCC--CCCc
Q 006413 461 FPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGE-----TFHRFDR-YLNFSNPL--I---SKNFDP--RACG 527 (646)
Q Consensus 461 LP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAVeDc~~-----~~~r~~~-yLnfs~p~--i---~~~f~~--~~~y 527 (646)
|....+.+|+|.|+-+-.++..++++-.. .-.+...|.. ....++. +....++. . ..-+.. ..+.
T Consensus 122 ~~~~~a~i~~~~~i~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~~~~l~~~ 199 (369)
T KOG1950|consen 122 LIEDGAAIYLVDDIQRFRNDDANFDVPNE--LNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFATNILPLI 199 (369)
T ss_pred eeccCceEEEecchhhccCccccccccch--hcccccceeeecccccceEEeccchhcCChhhhhhhchhhccCCCccce
Confidence 55689999999999999999999877443 1122222211 0001111 11111110 0 011222 2456
Q ss_pred cccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhhhhccccccccCcceeecC-CCC-CC-CcccccC--
Q 006413 528 WAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGL-GYN-PS-VNQRDIE-- 602 (646)
Q Consensus 528 FNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~l-gy~-~~-i~~~~ie-- 602 (646)
||+|++++-....- +..++.......-+.++.+..+...|.....+.+...|..-. ... +. .......
T Consensus 200 ~n~~~~v~~ps~~~-------~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~~~~~ 272 (369)
T KOG1950|consen 200 FNSGLLVFEPSLCN-------YKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSRASSV 272 (369)
T ss_pred eccCccccCCCccc-------hhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhhcccc
Confidence 99999998665432 222333322222233333333334554333267777776522 121 21 1111111
Q ss_pred CCeEEEccCCCCCccc
Q 006413 603 RAAVIHYNGNMKPWLE 618 (646)
Q Consensus 603 ~~~IIHY~G~~KPW~~ 618 (646)
.-..+||.|..|||..
T Consensus 273 ~~~~~~y~~~~~p~~~ 288 (369)
T KOG1950|consen 273 LRYALHYLGANKPELC 288 (369)
T ss_pred cchhhhccccCCCCcc
Confidence 2245699998788764
No 34
>TIGR02977 phageshock_pspA phage shock protein A. Members of this family are the phage shock protein PspA, from the phage shock operon. This is a narrower family than the set of PspA and its homologs, sometimes several in a genome, as described by PFAM model pfam04012. PspA appears to maintain the protonmotive force under stress conditions that include overexpression of certain phage secretins, heat shock, ethanol, and protein export defects.
Probab=47.14 E-value=35 Score=34.86 Aligned_cols=109 Identities=12% Similarity=0.119 Sum_probs=76.7
Q ss_pred CCCCchhHHHHhhhhHHHHHhhc--cccccCCchHHHHHHHHHHHHHHHhhcccC--CCCCCChhHHHHHHHHHHHHHhh
Q 006413 184 QTTPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQRALGDAT--KDSDLPRIANDRLKAMEQSLAKG 259 (646)
Q Consensus 184 ~~~~~d~~~~~~~dq~~~a~~y~--~~a~~~~~~~~~~el~~~~~e~~~~~~~~~--~d~~l~~~~~~~~~~m~~~~~~~ 259 (646)
+..|-+-.++.|+|+|.-||.=+ .+|..+.-++=..++..++.+.+.=.-.|- .+.+|-+.+.......+..+...
T Consensus 25 P~~~l~q~irem~~~l~~ar~~lA~~~a~~k~~e~~~~~~~~~~~~~~~~A~~Al~~G~EdLAr~Al~~k~~~~~~~~~l 104 (219)
T TIGR02977 25 PEKMIRLIIQEMEDTLVEVRTTSARTIADKKELERRVSRLEAQVADWQEKAELALSKGREDLARAALIEKQKAQELAEAL 104 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44578999999999999888743 444444444444566666666663222222 34557778877777777777777
Q ss_pred ccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006413 260 KQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTL 292 (646)
Q Consensus 260 ~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~ 292 (646)
+...-.-...+.+|+.-+..++.++...+.+..
T Consensus 105 ~~~~~~~~~~v~~l~~~l~~L~~ki~~~k~k~~ 137 (219)
T TIGR02977 105 ERELAAVEETLAKLQEDIAKLQAKLAEARARQK 137 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777888899999999999999988776655
No 35
>PRK10807 paraquat-inducible protein B; Provisional
Probab=35.40 E-value=1.1e+02 Score=35.66 Aligned_cols=46 Identities=17% Similarity=0.247 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 006413 240 DLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKK 289 (646)
Q Consensus 240 ~l~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~ 289 (646)
.||.++.+.++.++.+++.+.. -+..-..|++++..+++-++..+.
T Consensus 473 ~Lp~~L~~TL~~l~~~l~~~~~----~s~~~~~l~~tl~~l~~~~r~lr~ 518 (547)
T PRK10807 473 QLPADMQKTLRELNRSMQGFQP----GSPAYNKMVADMQRLDQVLRELQP 518 (547)
T ss_pred HHHHHHHHHHHHHHHHHhhcCC----CChHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666666666665331 122334455555555544444433
No 36
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=35.28 E-value=20 Score=31.94 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=26.6
Q ss_pred CcchhhhhHHhhhhccccCCCeEEEEecCeeeccCc-hhhh
Q 006413 445 KYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDL-SGLW 484 (646)
Q Consensus 445 ~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DL-seLw 484 (646)
.+.....++|+.+=-..-. ||+|.|+++.+++ +.+-
T Consensus 61 ~~~~~sD~~R~~~L~~~GG----iY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 61 NYAHKSDLLRYLVLYKYGG----IYLDLDVICLRPLDDPWL 97 (103)
T ss_pred chHHHHHHHHHHHHHHcCc----EEEeCccccCcchhhhhh
Confidence 3445678899987444433 8999999999999 6543
No 37
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=34.07 E-value=1.9e+02 Score=31.78 Aligned_cols=113 Identities=16% Similarity=0.177 Sum_probs=63.5
Q ss_pred EEEE-EcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCC-CceEEEEeccchhhcccccchhhhh
Q 006413 340 HYAL-FSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPG-RATVQVQNIEEFTWLNSSYSPVLKQ 417 (646)
Q Consensus 340 HIa~-~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~-~atI~v~nie~F~~l~~~y~p~L~q 417 (646)
.|++ +++...++.-+|.|++.+...-+...++|..|+-..+....-.. +. .++ .+... ++ +
T Consensus 3 PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~---~~~~i~-~i~~~-~~-----~------- 65 (334)
T cd02514 3 PVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKS---FGDGVT-HIQHP-PI-----S------- 65 (334)
T ss_pred CEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHh---hccccE-EEEcc-cc-----c-------
Confidence 3444 55556789999999999842223566788888865543222111 11 111 11110 00 0
Q ss_pred hccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccC--CCeEEEEecCeeeccCchhhhc
Q 006413 418 LNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR--LNKVLFLDDDVVVQKDLSGLWS 485 (646)
Q Consensus 418 l~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~--ldKVLYLDsDvIV~~DLseLw~ 485 (646)
+.+ ..... + ...|..++.+++.-+-.+|-. .++||+||+|+++--|.=+.++
T Consensus 66 ----------~~~--~~~~~--~--~~~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~ 119 (334)
T cd02514 66 ----------IKN--VNPPH--K--FQGYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQ 119 (334)
T ss_pred ----------ccc--cCccc--c--cchhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHH
Confidence 000 00000 1 113556677777777777754 8999999999999999655544
No 38
>PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription. The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homologue in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma54-containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator [].
Probab=33.03 E-value=80 Score=31.92 Aligned_cols=110 Identities=23% Similarity=0.215 Sum_probs=76.3
Q ss_pred CCCchhHHHHhhhhHHHHHhhc--cccccCCchHHHHHHHHHHHHHHHhhcccC--CCCCCChhHHHHHHHHHHHHHhhc
Q 006413 185 TTPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQRALGDAT--KDSDLPRIANDRLKAMEQSLAKGK 260 (646)
Q Consensus 185 ~~~~d~~~~~~~dq~~~a~~y~--~~a~~~~~~~~~~el~~~~~e~~~~~~~~~--~d~~l~~~~~~~~~~m~~~~~~~~ 260 (646)
+.+-+-.++.|.++|.-|+.=+ .+|....-.+=..++...+.+.+.-...|. .+.+|=..+..+....+..+...+
T Consensus 25 ~~~l~q~ird~e~~l~~a~~~~a~~~a~~~~le~~~~~~~~~~~~~~~~A~~Al~~g~edLAr~al~~k~~~e~~~~~l~ 104 (221)
T PF04012_consen 25 EKMLEQAIRDMEEQLRKARQALARVMANQKRLERKLDEAEEEAEKWEKQAELALAAGREDLAREALQRKADLEEQAERLE 104 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678889999999998888732 344333333333445555555553333332 355677788888888888888888
Q ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006413 261 QIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFL 294 (646)
Q Consensus 261 ~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~~~ 294 (646)
...-....-+.+|+.-+..++.++...+.+-.-|
T Consensus 105 ~~~~~~~~~~~~l~~~l~~l~~kl~e~k~k~~~l 138 (221)
T PF04012_consen 105 QQLDQAEAQVEKLKEQLEELEAKLEELKSKREEL 138 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888889999999999999988776655443
No 39
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=30.86 E-value=3.4e+02 Score=23.22 Aligned_cols=38 Identities=11% Similarity=0.035 Sum_probs=25.9
Q ss_pred EcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHH
Q 006413 344 FSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMR 383 (646)
Q Consensus 344 ~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk 383 (646)
+.+....+..++.|+...... ...+.|++++.+.+...
T Consensus 5 ~~~~~~~l~~~l~s~~~~~~~--~~~i~i~~~~~~~~~~~ 42 (156)
T cd00761 5 AYNEEPYLERCLESLLAQTYP--NFEVIVVDDGSTDGTLE 42 (156)
T ss_pred ecCcHHHHHHHHHHHHhCCcc--ceEEEEEeCCCCccHHH
Confidence 444456678889999888752 46788888876554433
No 40
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=29.70 E-value=1.9e+02 Score=33.06 Aligned_cols=118 Identities=18% Similarity=0.282 Sum_probs=60.3
Q ss_pred ceEE-EEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhh
Q 006413 338 LFHY-ALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLK 416 (646)
Q Consensus 338 ~iHI-a~~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~ 416 (646)
.+.| +++|+..-++.-+|.|++++....+.+.+.|--|+-+.+.....- .++...-.+... ++ .++
T Consensus 94 ~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi~---~y~~~v~~i~~~-~~-------~~i-- 160 (434)
T PF03071_consen 94 VIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVIK---SYGDQVTYIQHP-DF-------SPI-- 160 (434)
T ss_dssp ---EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHHH---GGGGGSEEEE-S----------S----
T ss_pred cceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHHH---HhhhhheeeecC-Cc-------CCc--
Confidence 4444 457766788999999999987544454444555665444332211 111110011110 00 000
Q ss_pred hhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccC--CCeEEEEecCeeeccCchhhhcc
Q 006413 417 QLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR--LNKVLFLDDDVVVQKDLSGLWSI 486 (646)
Q Consensus 417 ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~--ldKVLYLDsDvIV~~DLseLw~i 486 (646)
...+ ...++ ..|..++.|++.-|-.+|.. +++||.|.+|+.|--|+=+-|+-
T Consensus 161 ---------------~~~~-~~~~~--~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 161 ---------------TIPP-KEKKF--KGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp ------------------T-T-GGG--HHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred ---------------eeCc-ccccc--cchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 0000 00011 14667889999999999963 89999999999999998777654
No 41
>PRK10404 hypothetical protein; Provisional
Probab=29.32 E-value=2.3e+02 Score=25.83 Aligned_cols=80 Identities=9% Similarity=0.081 Sum_probs=55.3
Q ss_pred cCCchHHHHHHHHHHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhccCCccHHH-HHHHHHHHHHHHHHHHHHHHH
Q 006413 211 MRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAA-VVKKLRAMLHSTEEQLRVHKK 289 (646)
Q Consensus 211 ~~~~~~~~~el~~~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~~~~~d~~~-~~~kl~~~l~~~e~~~~~~~~ 289 (646)
..+.+++..||+.=+.++|.++..+..++ -..+.+.=...+..|..++...-|... +..+.|++...+++-++.+--
T Consensus 4 ~~~~~~l~~dl~~L~~dle~Ll~~~~~~a--~e~~~~lR~r~~~~L~~ar~~l~~~~~~~~~~~k~aa~~td~yV~e~Pw 81 (101)
T PRK10404 4 QFGDTRIDDDLTLLSETLEEVLRSSGDPA--DQKYVELKARAEKALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPW 81 (101)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 45678899999999999999998777553 123333333566666666644334433 445679999999999988776
Q ss_pred HHH
Q 006413 290 QTL 292 (646)
Q Consensus 290 q~~ 292 (646)
|+.
T Consensus 82 ~av 84 (101)
T PRK10404 82 QGI 84 (101)
T ss_pred HHH
Confidence 654
No 42
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function.
Probab=28.33 E-value=2.7e+02 Score=30.90 Aligned_cols=105 Identities=15% Similarity=0.184 Sum_probs=68.5
Q ss_pred HHhhhhHHHHHhhccccccCCchHHHHHHHH-----------HHHHHHHhhcccC-CCCCCChhHHHHHHHHHHHHHhhc
Q 006413 193 RQLKDQLIKAKVYLSLPAMRNNANFVRELRL-----------RIKEVQRALGDAT-KDSDLPRIANDRLKAMEQSLAKGK 260 (646)
Q Consensus 193 ~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~-----------~~~e~~~~~~~~~-~d~~l~~~~~~~~~~m~~~~~~~~ 260 (646)
.+|+.||+.++- .|+|.+|.-+=+.++-. +++++.+-.+|-. ....|.+++.+.++--..+.+..+
T Consensus 109 qkL~nqL~~~~~--vf~k~k~~~q~LE~li~~~~EEn~~lqlqL~~l~~e~~Ekeeesq~LnrELaE~layqq~L~~eyQ 186 (401)
T PF06785_consen 109 QKLKNQLFHVRE--VFMKTKGDIQHLEGLIRHLREENQCLQLQLDALQQECGEKEEESQTLNRELAEALAYQQELNDEYQ 186 (401)
T ss_pred HHHHHHHHHHHH--HHHHhcchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 478999999998 77777776544333332 2333333333333 222355566666666666667777
Q ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006413 261 QIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTA 299 (646)
Q Consensus 261 ~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~~~~~la~ 299 (646)
.-...-.+|.+|=.+-+-.+|.+|+-.+-.=.=|-||+.
T Consensus 187 atf~eq~~ml~kRQ~yI~~LEsKVqDLm~EirnLLQle~ 225 (401)
T PF06785_consen 187 ATFVEQHSMLDKRQAYIGKLESKVQDLMYEIRNLLQLES 225 (401)
T ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 777888899999899999999999776655555555554
No 43
>PRK10698 phage shock protein PspA; Provisional
Probab=27.93 E-value=1.1e+02 Score=31.59 Aligned_cols=112 Identities=12% Similarity=0.136 Sum_probs=73.9
Q ss_pred CCCCCchhHHHHhhhhHHHHHhhc--cccccCCchHHHHHHHHHHHHHHHhhcc--cCCCCCCChhHHHHHHHHHHHHHh
Q 006413 183 EQTTPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQRALGD--ATKDSDLPRIANDRLKAMEQSLAK 258 (646)
Q Consensus 183 ~~~~~~d~~~~~~~dq~~~a~~y~--~~a~~~~~~~~~~el~~~~~e~~~~~~~--~~~d~~l~~~~~~~~~~m~~~~~~ 258 (646)
+++.|-+-+++.|+|++.=+|.=+ .+|..+.-++=..++...+.+.++=-.- ...+-+|-+.++..-+.....+..
T Consensus 24 DP~k~l~q~i~em~~~l~~~r~alA~~~A~~k~~er~~~~~~~~~~~~e~kA~~Al~~G~EdLAr~AL~~K~~~~~~~~~ 103 (222)
T PRK10698 24 DPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQAEAQQVEWQEKAELALRKEKEDLARAALIEKQKLTDLIAT 103 (222)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 344578889999999998777632 4443333334444555555555531111 123455777777666677777777
Q ss_pred hccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006413 259 GKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFL 294 (646)
Q Consensus 259 ~~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~~~ 294 (646)
.+...-.....+.+|+.-+..++.++..++.+-..|
T Consensus 104 l~~~~~~~~~~~~~L~~~l~~L~~ki~eak~k~~~L 139 (222)
T PRK10698 104 LEHEVTLVDETLARMKKEIGELENKLSETRARQQAL 139 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777788889999999999999988776554443
No 44
>PRK15384 type III secretion system protein; Provisional
Probab=24.99 E-value=35 Score=36.01 Aligned_cols=85 Identities=18% Similarity=0.163 Sum_probs=48.6
Q ss_pred ccCCchHHHHHHHHHHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhc---cCCccHHHHHHHHHHHHHH--HHHHH
Q 006413 210 AMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGK---QIQDDCAAVVKKLRAMLHS--TEEQL 284 (646)
Q Consensus 210 ~~~~~~~~~~el~~~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~---~~~~d~~~~~~kl~~~l~~--~e~~~ 284 (646)
-.+.+.-|-.=+.+.+-|-||++|- -.|.|+..+-.+...++|+--.-.| +..+|-+--.+||..+-.. .|.++
T Consensus 68 NTk~~PYL~NiinaA~IE~eR~IGv-~VDGdFs~~Qk~af~kLE~~yeNIkiIYr~dvdfSMYDkKLsdIY~enI~kqe~ 146 (336)
T PRK15384 68 NTEKNPYLNNIIKAATIEKERLIGI-FVDGDFFPGQKDAFSKLEYDYENIKVIYRNDIDFSMYDKKLSEIYMENISKQES 146 (336)
T ss_pred ecCcCchHHHhHhHhhhccccEEEE-EEcCCcChhHHHHHHHHHHhhhcEEEEEeccCChhhhhhHHhHHHHHHHHHhhc
Confidence 3344445555556666777777763 3566776665555556665444333 4456777777888776542 34444
Q ss_pred HHHHHHHHHHH
Q 006413 285 RVHKKQTLFLT 295 (646)
Q Consensus 285 ~~~~~q~~~~~ 295 (646)
+.+.+...+|-
T Consensus 147 ~~~~~RD~yLL 157 (336)
T PRK15384 147 MPEEKRDYHLL 157 (336)
T ss_pred CchhhhHHHHH
Confidence 44444444443
No 45
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=24.94 E-value=47 Score=34.41 Aligned_cols=25 Identities=32% Similarity=0.567 Sum_probs=21.4
Q ss_pred hhhhccccCCCeEEEEecCeeeccC
Q 006413 455 FYLPEVFPRLNKVLFLDDDVVVQKD 479 (646)
Q Consensus 455 f~IPeiLP~ldKVLYLDsDvIV~~D 479 (646)
-.+..+||+++-||+||+||.|...
T Consensus 33 Cvva~~L~~~~~vlflDaDigVvNp 57 (222)
T PF03314_consen 33 CVVAKILPEYDWVLFLDADIGVVNP 57 (222)
T ss_pred HHHHHHhccCCEEEEEcCCceeecC
Confidence 4568889999999999999998754
No 46
>PRK15383 type III secretion system protein; Provisional
Probab=24.61 E-value=37 Score=35.83 Aligned_cols=88 Identities=18% Similarity=0.176 Sum_probs=54.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhc---cCCccHHHHHHHHHHHHHH--HHH
Q 006413 208 LPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGK---QIQDDCAAVVKKLRAMLHS--TEE 282 (646)
Q Consensus 208 ~a~~~~~~~~~~el~~~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~---~~~~d~~~~~~kl~~~l~~--~e~ 282 (646)
|--.+.+.-|-.=+.+.+-|-||++|- -.|.|+..+-.+...++|+--.-.| +..+|-+--.+||..+-.. .|.
T Consensus 67 IiNTk~~PYL~NiinaA~IE~eR~IGv-~VDGdFs~~Qk~af~kLE~~yeNIkiIYr~dvdfSMYDkKLsdIY~enI~kq 145 (335)
T PRK15383 67 IINTQKNPYLNNIINAAIIEKERIIGI-FVDGDFSKGQRKALGKLEQNYRNIKVIYNSDLNYSMYDKKLTTIYLENITKL 145 (335)
T ss_pred eeecCcCchHHHhhhHhhhccccEEEE-EEcCCcChhHHHHHHHHHHhhhcEEEEEeccCChhhhhhhHhHHHHHHHHHh
Confidence 334445555666667777788888874 3677887766666666666544444 4557888888998887543 344
Q ss_pred HHHHHHHHHHHHHH
Q 006413 283 QLRVHKKQTLFLTQ 296 (646)
Q Consensus 283 ~~~~~~~q~~~~~~ 296 (646)
+++.+.+...+|-+
T Consensus 146 e~~~~~~RD~yLL~ 159 (335)
T PRK15383 146 EAQSASERDEVLLN 159 (335)
T ss_pred hcCChhhhhHHHHH
Confidence 55444444444433
No 47
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=24.48 E-value=38 Score=35.79 Aligned_cols=88 Identities=16% Similarity=0.168 Sum_probs=55.2
Q ss_pred cccCCchHHHHHHHHHHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhc---cCCccHHHHHHHHHHHHHH--HHHH
Q 006413 209 PAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGK---QIQDDCAAVVKKLRAMLHS--TEEQ 283 (646)
Q Consensus 209 a~~~~~~~~~~el~~~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~---~~~~d~~~~~~kl~~~l~~--~e~~ 283 (646)
--.+.+.-|-.=+.+.+-|-||++|- -.|.|+..+-.+...++|+--.-.| +..+|-+--.+||..+-.. .|.+
T Consensus 62 iNTk~~PYL~NiinaA~IE~eR~IGv-~VDGdFs~~Qk~af~kLE~~~eNIkiIYr~dvdfSMYDkKLsdIY~enI~~qe 140 (326)
T PRK15382 62 LNTKEHPYLSNIINAAKIENERIIGV-LVDGDFTYEQKKEFLSLENEFQNIKIIYREDVDFSMYDKKLSDIYLENIHEQE 140 (326)
T ss_pred eecCcCchHHHhhhHhhhccccEEEE-EEcCCcChhHHHHHHHHHHhhhcEEEEEeccCChhhhhhhHhHHHHHHHHHhh
Confidence 33444555556666777788888874 3677887766666666666554444 4557888888898887543 4555
Q ss_pred HHHHHHHHHHHHHH
Q 006413 284 LRVHKKQTLFLTQL 297 (646)
Q Consensus 284 ~~~~~~q~~~~~~l 297 (646)
++.+.+...+|-++
T Consensus 141 ~~~~~~RD~yLL~l 154 (326)
T PRK15382 141 SYPASERDNYLLGL 154 (326)
T ss_pred cCChhhhhHHHHHH
Confidence 55555555444433
No 48
>PF06103 DUF948: Bacterial protein of unknown function (DUF948); InterPro: IPR009293 This family consists of bacterial sequences several of which are thought to be general stress proteins.
Probab=23.04 E-value=1.8e+02 Score=25.23 Aligned_cols=62 Identities=11% Similarity=0.269 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHH
Q 006413 217 FVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQL 284 (646)
Q Consensus 217 ~~~el~~~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~l~~~e~~~ 284 (646)
..+.+++-+++.++.+.... .++.+..++++.++.++.+..-|+.....++..+..+.++=-
T Consensus 20 ~l~~l~~~l~~~~~ti~~l~------~~~~~i~~e~~~ll~~~n~l~~dv~~k~~~v~~~~~~v~~~g 81 (90)
T PF06103_consen 20 VLKKLKKTLDEVNKTIDTLQ------EQVDPITKEINDLLHNTNELLEDVNEKLEKVDPVFEAVADLG 81 (90)
T ss_pred HHHHHHHHHHHHHHHHHHHH------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34555666666665554333 346777788888888888888888888888888877776543
No 49
>PF05957 DUF883: Bacterial protein of unknown function (DUF883); InterPro: IPR010279 This family consists of several bacterial proteins of unknown function that include the Escherichia coli genes for ElaB, YgaM and YqjD.
Probab=21.94 E-value=2.9e+02 Score=24.22 Aligned_cols=77 Identities=16% Similarity=0.185 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCChhHHHHHHHHHHHHHhhccCCccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006413 216 NFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDC-AAVVKKLRAMLHSTEEQLRVHKKQTLFL 294 (646)
Q Consensus 216 ~~~~el~~~~~e~~~~~~~~~~d~~l~~~~~~~~~~m~~~~~~~~~~~~d~-~~~~~kl~~~l~~~e~~~~~~~~q~~~~ 294 (646)
++..||.+-+.+++.++..+...+ ...+.+.-..++..+..+++.--|. ..+..+.+.....+|+.++.+--++.-+
T Consensus 2 ~l~~~l~~l~~d~~~l~~~~~~~~--~~~~~~~r~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~V~e~P~~svgi 79 (94)
T PF05957_consen 2 DLKAELEQLRADLEDLARSAADLA--GEKADEARDRAEEALDDARDRAEDAADQAREQAREAAEQTEDYVRENPWQSVGI 79 (94)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHChHHHHHH
Confidence 466777777777777776665332 1123333334444444444333232 3477888999999999999888877543
No 50
>PRK13817 ribosome-binding factor A; Provisional
Probab=21.83 E-value=80 Score=29.51 Aligned_cols=62 Identities=21% Similarity=0.246 Sum_probs=46.7
Q ss_pred HHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCCh------hHHHHHHHHHHHHHhhc
Q 006413 199 LIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPR------IANDRLKAMEQSLAKGK 260 (646)
Q Consensus 199 ~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~d~~l~~------~~~~~~~~m~~~~~~~~ 260 (646)
|..||+|+++-...+....+..|...-..+.+.|+....=.-.|. ...+....|+.+|.++.
T Consensus 43 l~~AkVyvs~~~~~~~~~~~~~L~~a~g~iR~~l~~~l~lR~~PeL~F~~D~s~e~~~~I~~Ll~~l~ 110 (119)
T PRK13817 43 LKQAKVFYSLLENQNEKEVQKALNKATGYLRHLLAQATVLRYVPKLEFVYDESIERAHRISLLIERAL 110 (119)
T ss_pred CCEEEEEEEECCCccHHHHHHHHHHhHHHHHHHHHHhCCCeECCEEEEEEcCchHHHHHHHHHHHHHH
Confidence 668999997775555566778899998899989988775445565 45667778888887764
No 51
>PLN02718 Probable galacturonosyltransferase
Probab=21.63 E-value=5e+02 Score=30.96 Aligned_cols=69 Identities=19% Similarity=0.244 Sum_probs=48.8
Q ss_pred CchHHHHHHHHHHHHHHHhhcccCC--CCCCChhHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHH
Q 006413 213 NNANFVRELRLRIKEVQRALGDATK--DSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTE 281 (646)
Q Consensus 213 ~~~~~~~el~~~~~e~~~~~~~~~~--d~~l~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~l~~~e 281 (646)
.....+|.||-+|--..--++=|.. -..|..+...+|++.+.+|..|..-..=-..+..|+++|=+...
T Consensus 162 ~~d~~v~~~~dql~~ak~y~~~a~~~~~~~~~~el~~~i~e~~~~l~~~~~d~~lp~~~~~~~~~m~~~~~ 232 (603)
T PLN02718 162 ATDEKVKEIRDKIIQAKAYLNLAPPGSNSQLVKELRLRTKELERAVGDATKDKDLSKSALQRMKSMEVTLY 232 (603)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHH
Confidence 3445678888888777765655553 34478899999999999999996544334566677777655554
Done!