Your job contains 1 sequence.
>006415
MEVKSGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL
NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGS
VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI
LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV
PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML
KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAV
RKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSKLKVDD
GHAELGMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPK
EILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENV
YSDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGK
FKSGEFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006415
(646 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2159461 - symbol:HDA18 "AT5G61070" species:370... 1447 3.4e-148 1
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1... 813 8.1e-81 1
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp... 801 1.8e-79 1
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 797 2.6e-79 1
UNIPROTKB|Q9UBN7 - symbol:HDAC6 "Histone deacetylase 6" s... 775 1.2e-77 2
UNIPROTKB|B4DZH6 - symbol:HDAC6 "Histone deacetylase 6" s... 775 1.5e-77 2
UNIPROTKB|F1MQP3 - symbol:HDAC6 "Uncharacterized protein"... 781 2.6e-77 1
UNIPROTKB|I3LEZ7 - symbol:HDAC6 "Uncharacterized protein"... 778 6.0e-77 1
UNIPROTKB|F1PN11 - symbol:HDAC6 "Uncharacterized protein"... 771 4.9e-76 1
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 756 5.7e-75 1
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 756 5.7e-75 1
TAIR|locus:2095087 - symbol:HDA15 "AT3G18520" species:370... 755 7.3e-75 1
UNIPROTKB|G4NCI1 - symbol:MGG_01076 "Histone deacetylase ... 685 8.5e-75 2
POMBASE|SPBC800.03 - symbol:clr3 "histone deacetylase (cl... 730 3.2e-72 1
FB|FBgn0041210 - symbol:HDAC4 "HDAC4" species:7227 "Droso... 728 4.3e-71 1
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso... 721 1.4e-70 1
ZFIN|ZDB-GENE-061013-95 - symbol:hdac4 "histone deacetyla... 712 4.5e-70 1
UNIPROTKB|H9KZE7 - symbol:H9KZE7 "Uncharacterized protein... 595 6.0e-70 2
ASPGD|ASPL0000014944 - symbol:hdaA species:162425 "Emeric... 704 1.8e-69 1
UNIPROTKB|Q8WUI4 - symbol:HDAC7 "Histone deacetylase 7" s... 693 2.7e-68 1
UNIPROTKB|F1N616 - symbol:HDAC7 "Uncharacterized protein"... 693 3.9e-68 1
UNIPROTKB|F1PK81 - symbol:HDAC7 "Uncharacterized protein"... 691 4.4e-68 1
RGD|1310748 - symbol:Hdac9 "histone deacetylase 9" specie... 592 4.7e-68 2
UNIPROTKB|F1LSN5 - symbol:F1LSN5 "Uncharacterized protein... 690 5.6e-68 1
RGD|619979 - symbol:Hdac4 "histone deacetylase 4" species... 694 8.6e-68 1
WB|WBGene00001837 - symbol:hda-4 species:6239 "Caenorhabd... 688 9.2e-68 1
UNIPROTKB|H9KZJ3 - symbol:HDAC10 "Uncharacterized protein... 683 3.1e-67 1
MGI|MGI:3036234 - symbol:Hdac4 "histone deacetylase 4" sp... 687 5.1e-67 1
MGI|MGI:1891835 - symbol:Hdac7 "histone deacetylase 7" sp... 681 5.1e-67 1
SGD|S000004966 - symbol:HDA1 "Putative catalytic subunit ... 681 5.1e-67 1
UNIPROTKB|F1NWX8 - symbol:HDAC4 "Histone deacetylase 4" s... 671 8.5e-67 2
UNIPROTKB|J3KPH8 - symbol:HDAC7 "Histone deacetylase 7" s... 682 1.1e-66 1
UNIPROTKB|F1NP26 - symbol:HDAC4 "Histone deacetylase 4" s... 571 1.3e-66 2
TAIR|locus:2159431 - symbol:AT5G61050 "AT5G61050" species... 672 4.5e-66 1
UNIPROTKB|F5GX36 - symbol:HDAC4 "Histone deacetylase 4" s... 663 4.1e-65 1
ZFIN|ZDB-GENE-030131-5464 - symbol:hdac10 "histone deacet... 662 5.2e-65 1
UNIPROTKB|E2RSA8 - symbol:HDAC10 "Uncharacterized protein... 660 8.5e-65 1
UNIPROTKB|P56524 - symbol:HDAC4 "Histone deacetylase 4" s... 663 2.3e-64 1
UNIPROTKB|F1MYR0 - symbol:HDAC4 "Uncharacterized protein"... 661 3.7e-64 1
UNIPROTKB|I3LM52 - symbol:HDAC4 "Uncharacterized protein"... 660 4.0e-64 1
UNIPROTKB|Q969S8 - symbol:HDAC10 "Histone deacetylase 10"... 648 1.6e-63 1
MGI|MGI:2158340 - symbol:Hdac10 "histone deacetylase 10" ... 645 3.3e-63 1
UNIPROTKB|F1PRU6 - symbol:HDAC4 "Uncharacterized protein"... 650 5.9e-63 1
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 643 1.3e-62 1
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 643 1.4e-62 1
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 643 1.4e-62 1
UNIPROTKB|Q0VD49 - symbol:HDAC10 "Uncharacterized protein... 635 3.8e-62 1
UNIPROTKB|P83038 - symbol:HDAC4 "Histone deacetylase 4" s... 642 4.3e-62 1
UNIPROTKB|F1RXT2 - symbol:LOC100518786 "Uncharacterized p... 625 4.3e-61 1
UNIPROTKB|I3LDD6 - symbol:LOC100518786 "Uncharacterized p... 625 4.3e-61 1
UNIPROTKB|Q9UKV0 - symbol:HDAC9 "Histone deacetylase 9" s... 594 5.1e-57 1
UNIPROTKB|F1LQG9 - symbol:Hdac5 "Protein Hdac5" species:1... 584 9.8e-57 1
UNIPROTKB|F6X8E7 - symbol:HDAC9 "Uncharacterized protein"... 591 1.4e-56 1
UNIPROTKB|F1S1J4 - symbol:HDAC5 "Uncharacterized protein"... 581 2.0e-56 1
UNIPROTKB|F1LM64 - symbol:Hdac5 "Protein Hdac5" species:1... 584 3.3e-56 1
UNIPROTKB|F1LSL9 - symbol:Hdac5 "Protein Hdac5" species:1... 584 3.3e-56 1
MGI|MGI:1333784 - symbol:Hdac5 "histone deacetylase 5" sp... 587 4.4e-56 1
UNIPROTKB|Q80ZH1 - symbol:HDAC5 "Histone deacetylase 5" s... 585 7.2e-56 1
UNIPROTKB|Q9UQL6 - symbol:HDAC5 "Histone deacetylase 5" s... 584 9.5e-56 1
UNIPROTKB|E1C7C0 - symbol:HDAC9 "Uncharacterized protein"... 582 1.3e-55 1
UNIPROTKB|J9P9N5 - symbol:HDAC5 "Uncharacterized protein"... 582 1.4e-55 1
UNIPROTKB|F1P6I3 - symbol:HDAC5 "Uncharacterized protein"... 582 1.5e-55 1
UNIPROTKB|Q5R902 - symbol:HDAC5 "Histone deacetylase 5" s... 582 1.6e-55 1
UNIPROTKB|F1MNA5 - symbol:HDAC5 "Uncharacterized protein"... 581 2.0e-55 1
UNIPROTKB|F1NES1 - symbol:HDAC4 "Histone deacetylase 4" s... 571 1.9e-54 1
RGD|1305874 - symbol:Hdac10 "histone deacetylase 10" spec... 553 1.9e-53 1
UNIPROTKB|C9J8B8 - symbol:HDAC10 "Histone deacetylase 10"... 475 1.8e-52 2
UNIPROTKB|H0YH91 - symbol:HDAC7 "Histone deacetylase 7" s... 385 1.4e-51 3
UNIPROTKB|E2RS82 - symbol:HDAC10 "Uncharacterized protein... 532 3.1e-51 1
WB|WBGene00001838 - symbol:hda-10 species:6239 "Caenorhab... 495 2.6e-47 1
UNIPROTKB|I3L961 - symbol:I3L961 "Uncharacterized protein... 491 6.9e-47 1
UNIPROTKB|I3LKB5 - symbol:I3LKB5 "Uncharacterized protein... 487 1.8e-46 1
UNIPROTKB|E7EUZ1 - symbol:HDAC6 "Histone deacetylase 6" s... 482 6.2e-46 1
UNIPROTKB|Q3Z9M2 - symbol:DET0330 "Histone deacetylase fa... 458 2.2e-43 1
TIGR_CMR|DET_0330 - symbol:DET_0330 "histone deacetylase ... 458 2.2e-43 1
TIGR_CMR|SPO_3195 - symbol:SPO_3195 "histone deacetylase ... 444 8.7e-42 1
TAIR|locus:2119201 - symbol:HDA14 "AT4G33470" species:370... 438 4.4e-41 1
UNIPROTKB|Q5LQF5 - symbol:SPO2535 "Histone deacetylase/Ac... 432 2.2e-40 1
TIGR_CMR|SPO_2535 - symbol:SPO_2535 "histone deacetylase/... 432 2.2e-40 1
UNIPROTKB|Q604Q2 - symbol:MCA2486 "Histone deacetylase/Ac... 426 1.1e-39 1
TAIR|locus:2201826 - symbol:HDA08 "AT1G08460" species:370... 417 1.1e-38 1
UNIPROTKB|Q4KBB7 - symbol:PFL_3361 "Histone deacetylase f... 415 1.9e-38 1
TIGR_CMR|SPO_0250 - symbol:SPO_0250 "histone deacetylase ... 410 7.1e-38 1
UNIPROTKB|E1BQQ2 - symbol:Gga.27678 "Uncharacterized prot... 404 3.4e-37 1
UNIPROTKB|Q484X2 - symbol:CPS_1655 "Histone deacetylase f... 390 1.2e-35 1
TIGR_CMR|CPS_1655 - symbol:CPS_1655 "histone deacetylase ... 390 1.2e-35 1
TIGR_CMR|SPO_A0096 - symbol:SPO_A0096 "histone deacetylas... 381 1.2e-34 1
UNIPROTKB|F1MWS5 - symbol:HDAC9 "Uncharacterized protein"... 403 1.5e-34 1
TIGR_CMR|CHY_0263 - symbol:CHY_0263 "histone deacetylase ... 373 9.2e-34 1
UNIPROTKB|F1SEI2 - symbol:HDAC9 "Uncharacterized protein"... 335 1.3e-29 1
TIGR_CMR|SPO_2002 - symbol:SPO_2002 "acetylpolyamine amin... 331 3.7e-29 1
SGD|S000005274 - symbol:RPD3 "Histone deacetylase" specie... 330 4.7e-29 1
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa... 329 6.1e-29 1
TIGR_CMR|GSU_1222 - symbol:GSU_1222 "histone deacetylase/... 329 6.1e-29 1
UNIPROTKB|E7EPS2 - symbol:HDAC6 "Histone deacetylase 6" s... 328 7.8e-29 1
UNIPROTKB|Q4K950 - symbol:aphA_2 "Acetylpolyamine aminohy... 328 7.8e-29 1
WB|WBGene00001836 - symbol:hda-3 species:6239 "Caenorhabd... 335 1.3e-28 1
UNIPROTKB|F1NFY6 - symbol:HDAC8 "Histone deacetylase" spe... 325 1.6e-28 1
POMBASE|SPBC36.05c - symbol:clr6 "histone deacetylase (cl... 315 2.0e-27 1
UNIPROTKB|Q3AFN8 - symbol:acuC "Acetoin utilization prote... 314 2.6e-27 1
WARNING: Descriptions of 116 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 1447 (514.4 bits), Expect = 3.4e-148, P = 3.4e-148
Identities = 278/427 (65%), Positives = 338/427 (79%)
Query: 6 GEGRTI---KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
G+G+ +R+VGL+YDE MCKH+TP+G E P+RI+ IW KLQ AG+ QRCVVL
Sbjct: 48 GDGKVAGKSQRKVGLVYDETMCKHDTPNGKVDVECPDRIRVIWEKLQLAGVTQRCVVLGG 107
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+A+DK+L VHT+ HVNL+K+IS+K+ DSRR++IAS+L+SIYLN GSSEAAYLAAGSV+
Sbjct: 108 SKAEDKHLKLVHTKKHVNLVKSISTKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAGSVV 167
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
+VAE+VAEGEL+ FAIVRPPGHHAE DEAMGFCL+NNVAVAASFLLNERP+L + KILI
Sbjct: 168 KVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILI 227
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWD+HHGN TQKMFWKD RVL FSVHRH+ G+FYP DDG + M+GEGPG G+NINVPW
Sbjct: 228 VDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPW 287
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
E G CGDADYLAVW+HIL+PV K+F PDII++SAGFDAA GDPLGGC VTPYGYSVMLKK
Sbjct: 288 EQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKK 347
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
LM+FA GKIVLALEGGYNL S+ S LAC+ VLLEDK + GSSE YP EST RVIQAVR+
Sbjct: 348 LMEFAHGKIVLALEGGYNLESLGKSSLACVQVLLEDKQIHGSSETYPLESTRRVIQAVRE 407
Query: 363 KLSAFWPTLADELPTKLTSLKAPPAHMISSSDS---EDEDTK--VETLEAVLQVALSKLK 417
+L +WP+L + + +LK P A +S+D+ E E+ K + + L+ +LK
Sbjct: 408 RLCTYWPSLDASMASN-ENLKNPSAER-NSADALLREVEELKSLMAARDGELEARRKELK 465
Query: 418 VDDGHAE 424
+ E
Sbjct: 466 AKNKELE 472
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 813 (291.2 bits), Expect = 8.1e-81, P = 8.1e-81
Identities = 164/363 (45%), Positives = 223/363 (61%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDERM H ++HPE P RI I L+ G+ RC++L A+ A D L
Sbjct: 479 LQNRTGLVYDERMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSEL 538
Query: 71 LSVHTENHVNLIKNISS-KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ K D R+ + SIY+ + A LA G+ + E V
Sbjct: 539 LTCHSAEYVERLRATEKMKTRDLHRE--GANFESIYICPSTFACAQLATGAACRLVEAVL 596
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG-INKILIVDWDVH 188
GE+ + AIVRPPGHHAEPD A GFC +N+VAVAA + + G +ILIVDWDVH
Sbjct: 597 SGEVLNGIAIVRPPGHHAEPDAACGFCFFNSVAVAAR---HAQVIAGRALRILIVDWDVH 653
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ +F +DP VL+ S+HR++ GTF+P D+G + +G G G+ +NVPW R G
Sbjct: 654 HGNGTQHIFEEDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNGPRMG 713
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DADYLA W ++LP+A +F P++++ISAGFDAA GDPLGGC+VTP GY+ + LM A
Sbjct: 714 DADYLATWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAG 773
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
G+I+L LEGGYNL SIS S+ AC + LL D P +S P I V + +W
Sbjct: 774 GRIILILEGGYNLTSISESMAACTHSLLGDPPPQLTSLRPPQSGALASISEVIQVHRKYW 833
Query: 369 PTL 371
+L
Sbjct: 834 RSL 836
Score = 659 (237.0 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 142/360 (39%), Positives = 209/360 (58%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GL++DE++ + D PENP R+ AI +L G+ RCV A+ A+ + L+ VH+
Sbjct: 86 GLVFDEQLNDFHCLWDDSFPENPERLHAIKEQLILEGLLGRCVSFQARFAEKEELMLVHS 145
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+++L++ R +A +S+YL+ S A LA GSV+ + + V E+ +
Sbjct: 146 LEYIDLMETTQYMNEGELRV-LAGTYDSVYLHPNSYSCACLATGSVLRLVDAVMGAEIRN 204
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
A++RPPGHHA+ G+C++N++AVAA + + I +ILIVDWDVHHG TQ
Sbjct: 205 GMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHR---IQRILIVDWDVHHGQGTQF 261
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
+F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 IFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAA 321
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPL---GGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++
Sbjct: 322 FLHILLPVAFEFQPQLVLVAAGFDALHGDPKVRQGEMSATPAGFAHLTHFLMGLAGGKLI 381
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
L+LEGGYNL +++ V ++ LL D P+ S A P S I + L FW L
Sbjct: 382 LSLEGGYNLHALAKGVSGSLHTLLGDPCPMLESPVA-PCASAQTSISCTLEALEPFWEVL 440
Score = 44 (20.5 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 9/36 (25%), Positives = 22/36 (61%)
Query: 357 IQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISS 392
+ ++ + ++A +L + P +LTSL+ P + ++S
Sbjct: 786 LTSISESMAACTHSLLGDPPPQLTSLRPPQSGALAS 821
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 801 (287.0 bits), Expect = 1.8e-79, P = 1.8e-79
Identities = 155/333 (46%), Positives = 214/333 (64%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDE+M H ++HPE P RI I L+ G+ RC++L A+ A D L
Sbjct: 476 LQNRTGLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSEL 535
Query: 71 LSVHTENHVNLIKNISS-KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ K D R+ + +SIY+ + A LA G+ + E V
Sbjct: 536 LTCHSAEYVEHLRTTEKMKTRDLHRE--GANFDSIYICPSTFACAKLATGAACRLVEAVL 593
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASF--LLNERPELGINKILIVDWDV 187
GE+ + A+VRPPGHHAEP+ A GFC +N+VAVAA ++ R +ILIVDWDV
Sbjct: 594 SGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRAL----RILIVDWDV 649
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ +F DP VL+ S+HR++ GTF+P D+G + +G G+G+ +NVPW R
Sbjct: 650 HHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRM 709
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GDADYLA W ++LP+A +F P++++ISAGFDAA GDPLGGC+VTP GY+ + LM A
Sbjct: 710 GDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLA 769
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
G+I+L LEGGYNL SIS S+ AC + LL D P
Sbjct: 770 GGRIILILEGGYNLASISESMAACTHSLLGDPP 802
Score = 677 (243.4 bits), Expect = 9.3e-66, P = 9.3e-66
Identities = 140/363 (38%), Positives = 212/363 (58%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GL++DE++ + D PE+P R+ AI +L G+ RCV A+ A+ + L+ VH+
Sbjct: 86 GLVFDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQARFAEKEELMLVHS 145
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+++L++ R +A +S+YL+ S A LA GSV+ + + + E+ +
Sbjct: 146 LEYIDLMETTQYMNEGELRV-LAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEIRN 204
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
A++RPPGHHA+ + G+C++N++AVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 GMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHR---IQRVLIVDWDVHHGQGTQF 261
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
+F +DP VL+FS+HR+E G F+P ++ IG G G GY INVPW DADY+A
Sbjct: 262 IFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAA 321
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLAL 315
+ HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+L
Sbjct: 322 FLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLAGGKLILSL 381
Query: 316 EGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADEL 375
EGGYNL +++ V A ++ LL D S P S I + L FW L +
Sbjct: 382 EGGYNLRALAKGVSASLHTLLGDPCPMLESCVVPCASAQTSIYCTLEALEPFWEVLERSV 441
Query: 376 PTK 378
T+
Sbjct: 442 ETQ 444
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 156/374 (41%), Positives = 237/374 (63%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GL+YD+RM H+ +HPE P RI I+++ + + RC + A+ A ++ L H+
Sbjct: 445 GLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEELRLLSRCHRIPARLATEEELALCHS 504
Query: 76 ENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
H+++IK SS+ R +R+ + NSI+++ S A LAAGS A+ + G++
Sbjct: 505 SKHISIIK--SSEHMKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSAQAILTGQVR 562
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLN-ERPELGINKILIVDWDVHHGNST 193
+A AIVRPPGHHAE D A GFC +N A+ A + + R L ++LIVDWDVHHGN T
Sbjct: 563 NAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESL---RVLIVDWDVHHGNGT 619
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +D VL+ S+HR+E G F+P ++D Y +G G G GYN+N+PW G+ GD +Y+
Sbjct: 620 QHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYM 679
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + H+++P+A++F P+++++SAGFDAA GDPLGG +VTP GY+ + +LM A G++++
Sbjct: 680 AAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLI 739
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV-IQAVRKKLSAFWPTLA 372
LEGGYNL SIS S+ C ++LL D P + P +++ V I V + + FW +L
Sbjct: 740 ILEGGYNLTSISESMSMCTSMLLGDSPPS-LDHLTPLKTSATVSINNVLRAHAPFWSSLR 798
Query: 373 DELPTKLT-SLKAP 385
+P L SL +P
Sbjct: 799 VNIPESLRLSLPSP 812
Score = 719 (258.2 bits), Expect = 1.5e-70, P = 1.5e-70
Identities = 147/367 (40%), Positives = 220/367 (59%)
Query: 7 EGRTIKRRVGLLYDERMCK-HNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
+G++ GL+Y + + H D HPE P R+ + L+ G+ RCV + A+
Sbjct: 55 QGKSKATGTGLVYVDAFTRFHCLWDAS-HPECPARVSTVMEMLETEGLLGRCVQVEARAV 113
Query: 66 KDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVA 125
+ LL VHT+ +V L+K+ + + +A K +S+YL+ G +A L+ GSV+++
Sbjct: 114 TEDELLLVHTKEYVELMKS-TQNMTEEELKTLAEKYDSVYLHPGFFSSACLSVGSVLQLV 172
Query: 126 ERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
++V +L + F+I RPPGHHA+ D+ GFC++NN+A+AA + +R + ++LIVDW
Sbjct: 173 DKVMTSQLRNGFSINRPPGHHAQADKMNGFCMFNNLAIAARYA-QKRHR--VQRVLIVDW 229
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHG Q +F +DP VL+FSVHR+E G+F+P + + +G G G GYNIN+PW
Sbjct: 230 DVHHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKV 289
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
DY+ + +LLPVA +F P +++++AGFDA GDP GG +V+P +S++ L
Sbjct: 290 GMESGDYITAFQQLLLPVAYEFQPQLVLVAAGFDAVIGDPKGGMQVSPECFSILTHMLKG 349
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKL 364
AQG++VLALEGGYNL S + V A M LL D P SS A P ES + I L
Sbjct: 350 VAQGRLVLALEGGYNLQSTAEGVCASMRSLLGDPCPHLPSSGA-PCESALKSISKTISDL 408
Query: 365 SAFWPTL 371
FW +L
Sbjct: 409 YPFWKSL 415
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 775 (277.9 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 164/387 (42%), Positives = 228/387 (58%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 477 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 536
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 537 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA +ILIVDWDVHH
Sbjct: 595 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHA--LRILIVDWDVHH 652
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W R GD
Sbjct: 653 GNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGD 712
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
ADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM A G
Sbjct: 713 ADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASG 772
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWP 369
+I+L LEGGYNL SIS S+ AC LL D P + P I + +W
Sbjct: 773 RIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHRRYWR 832
Query: 370 TLA-----D-ELPT--KLTSLKAP-PA 387
+L D E P+ KL + KAP PA
Sbjct: 833 SLRVMKVEDREGPSSSKLVTKKAPQPA 859
Score = 674 (242.3 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 142/363 (39%), Positives = 210/363 (57%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH+
Sbjct: 87 GLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHS 146
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+++L++ R +A +S+YL+ S A LA+GSV+ + + V E+ +
Sbjct: 147 LEYIDLMETTQYMNEGELRV-LADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRN 205
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 206 GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQF 262
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 263 TFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAA 322
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLAL 315
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+L
Sbjct: 323 FLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSL 382
Query: 316 EGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
EGGYNL +++ V A ++ LL D P+ S A P S + + L FW L
Sbjct: 383 EGGYNLRALAEGVSASLHTLLGDPCPMLESPGA-PCRSAQASVSCALEALEPFWEVLVRS 441
Query: 375 LPT 377
T
Sbjct: 442 TET 444
Score = 38 (18.4 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 369 PTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSK 415
P LA+ + T+ + ++S+ +E T +T VAL++
Sbjct: 861 PRLAERMTTREKKVLEAGMGKVTSASFGEESTPGQTNSETAVVALTQ 907
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 775 (277.9 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 164/387 (42%), Positives = 228/387 (58%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 491 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 550
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 551 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 608
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA +ILIVDWDVHH
Sbjct: 609 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHA--LRILIVDWDVHH 666
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W R GD
Sbjct: 667 GNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGD 726
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
ADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM A G
Sbjct: 727 ADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASG 786
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWP 369
+I+L LEGGYNL SIS S+ AC LL D P + P I + +W
Sbjct: 787 RIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHRRYWR 846
Query: 370 TLA-----D-ELPT--KLTSLKAP-PA 387
+L D E P+ KL + KAP PA
Sbjct: 847 SLRVMKVEDREGPSSSKLVTKKAPQPA 873
Score = 674 (242.3 bits), Expect = 2.0e-66, Sum P(2) = 2.0e-66
Identities = 142/363 (39%), Positives = 210/363 (57%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH+
Sbjct: 101 GLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHS 160
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+++L++ R +A +S+YL+ S A LA+GSV+ + + V E+ +
Sbjct: 161 LEYIDLMETTQYMNEGELRV-LADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRN 219
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 220 GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQF 276
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 277 TFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAA 336
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLAL 315
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+L
Sbjct: 337 FLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSL 396
Query: 316 EGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
EGGYNL +++ V A ++ LL D P+ S A P S + + L FW L
Sbjct: 397 EGGYNLRALAEGVSASLHTLLGDPCPMLESPGA-PCRSAQASVSCALEALEPFWEVLVRS 455
Query: 375 LPT 377
T
Sbjct: 456 TET 458
Score = 38 (18.4 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 369 PTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSK 415
P LA+ + T+ + ++S+ +E T +T VAL++
Sbjct: 875 PRLAERMTTREKKVLEAGMGKVTSASFGEESTPGQTNSETAVVALTQ 921
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 781 (280.0 bits), Expect = 2.6e-77, P = 2.6e-77
Identities = 153/329 (46%), Positives = 211/329 (64%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD++M H+ +YHPE P RI I + L G+ +RC L A+ A D L
Sbjct: 478 LQARTGLVYDQQMMDHHNLWDNYHPEMPQRIHFIMHHLDELGLAKRCHSLPARPATDAEL 537
Query: 71 LSVHTENHVNLIKNISS-KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L H+ H+ ++ K + RR+ + +SIY+ + A LAAG+ + E V
Sbjct: 538 LC-HSAEHLERLRATEKMKTRELRRE--GANYDSIYICSSTFACAQLAAGAACRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
GE+ + A+VRPPGHHAEPD A GFC +N+VAVAA + +ILIVDWD+HH
Sbjct: 595 AGEVLNGVAVVRPPGHHAEPDAACGFCFFNSVAVAARHA--QAISGHALRILIVDWDIHH 652
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ +F +DP VL+ S+HR++ GTF+P ++G T IG+ G G+ +NV W R GD
Sbjct: 653 GNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGPRMGD 712
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
ADYLA W ++LPVA +F P+++++SAGFDAA GDPLGGC+V+P GY+ + +LM A G
Sbjct: 713 ADYLAAWHRLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMGLANG 772
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLED 338
I+L LEGGYNL SIS S+ AC LL D
Sbjct: 773 HIILILEGGYNLTSISESMAACTRSLLGD 801
Score = 692 (248.7 bits), Expect = 2.0e-67, P = 2.0e-67
Identities = 145/366 (39%), Positives = 216/366 (59%)
Query: 7 EGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
E RT+ GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+
Sbjct: 79 ESRTLSG-TGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLIQEGLLDRCVSFQARFAE 137
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAE 126
+ L+ VH+ +++L++ + +A +S+YL+ S A LA+GSV+ + +
Sbjct: 138 KEELMLVHSLEYIDLMETTQYMN-EEELHVLADTYDSVYLHPNSYTCACLASGSVLRLVD 196
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
V E E+ + AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWD
Sbjct: 197 AVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHD---IQRVLIVDWD 253
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHG Q F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW
Sbjct: 254 VHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQVG 313
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
DADY+A + H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM
Sbjct: 314 MQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGL 373
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLS 365
A+GK++L+LEGGYNL S++ V A ++ LL D PV S A P S + + L
Sbjct: 374 AEGKLILSLEGGYNLHSLAEGVSATLHTLLGDPCPVLESPGA-PCPSAQASLSCTLEALE 432
Query: 366 AFWPTL 371
FW +L
Sbjct: 433 PFWESL 438
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 778 (278.9 bits), Expect = 6.0e-77, P = 6.0e-77
Identities = 150/330 (45%), Positives = 209/330 (63%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD++M H +HPE P RI I +L+ G+ RC+ L A+ A D L
Sbjct: 486 LQARTGLVYDQQMMDHYNLWDSHHPEMPQRILRIMRRLEELGLAGRCLALPARPATDAEL 545
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ +V+ I+ + K R + +SIY+ G+ A LAAG+ + E V
Sbjct: 546 LACHSAEYVSRIR-ATEKMRTRELHREGANYDSIYICPGTFACAQLAAGAACRLVEAVLA 604
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA + +ILIVDWDVHHG
Sbjct: 605 GEVLNGIAVVRPPGHHAERDSACGFCFFNSVAVAARHA--QAISGHALRILIVDWDVHHG 662
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ +F +DP VL+ S+HR++ GTF+P D+G + IG+ G G+ +NV W R GD
Sbjct: 663 NGTQHLFEEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWNGPRVGDP 722
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
+YLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P Y+ + LM A G+
Sbjct: 723 EYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPECYAHLTHLLMGLANGR 782
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKP 340
I+L LEGGYNL SIS S+ AC LL D P
Sbjct: 783 IILILEGGYNLISISESMAACTRSLLGDSP 812
Score = 669 (240.6 bits), Expect = 6.3e-65, P = 6.3e-65
Identities = 143/372 (38%), Positives = 212/372 (56%)
Query: 7 EGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
E RT GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+
Sbjct: 89 EART-PSGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLMQEGLLDRCVSFQARFAE 147
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAE 126
+ L+ VH+ +++L++ R +A +S+YL+ S A LA+GSV+ + +
Sbjct: 148 KEELMLVHSLEYIDLMETTQYMNEGELRV-LADTYDSVYLHPNSYTCACLASGSVLRLVD 206
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
V E+ + AI+RPPGHHA+ G+C++N+VA+AA + + + ++LIVDWD
Sbjct: 207 AVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVALAARYAQQKHD---VQRVLIVDWD 263
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHG TQ F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW
Sbjct: 264 VHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVG 323
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
DADY+A + H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM
Sbjct: 324 MRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGL 383
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLS 365
A GK++L+LEGGYNL S++ V A ++ LL D P+ A P S + + L
Sbjct: 384 AGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPLLEFPGA-PCPSAQASLSCALEALE 442
Query: 366 AFWPTLADELPT 377
FW L T
Sbjct: 443 PFWEVLVRSAET 454
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 771 (276.5 bits), Expect = 4.9e-76, P = 4.9e-76
Identities = 149/331 (45%), Positives = 210/331 (63%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD M H ++HPE P R+ I +L+ G+ RC+ L + A D L
Sbjct: 490 LQARTGLVYDPAMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAEL 549
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R S +SIY+ + A LA GSV + E V
Sbjct: 550 LTCHSAEYVGRLR--ATEKMKTRELHREGSNFDSIYICPSTFACAQLATGSVCRLVEAVL 607
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
E+ + A+VRPPGHHAE D A GFC +N+VAVAA + +ILIVDWDVHH
Sbjct: 608 AREVLNGTAVVRPPGHHAERDAACGFCFFNSVAVAARHA--QAISGHALRILIVDWDVHH 665
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ +F +DP VL+ S+HR++ GTF+P D+G + +G+ G G+ +NV W R GD
Sbjct: 666 GNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGPRVGD 725
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
ADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM A G
Sbjct: 726 ADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANG 785
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
++VL LEGGYNL SIS S+ AC LL D P
Sbjct: 786 RVVLILEGGYNLTSISESMAACTRSLLGDPP 816
Score = 676 (243.0 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 143/358 (39%), Positives = 214/358 (59%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH+
Sbjct: 101 GLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQDGLLDRCVSFQARFAEKEELMLVHS 160
Query: 76 ENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+++L++ +++ + RI A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 161 LEYIDLME--TTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLRNEIR 218
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AIVRPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 219 NGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKH---NIERVLIVDWDVHHGQGTQ 275
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ IG G G GY INVPW DADY+A
Sbjct: 276 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQVGMRDADYIA 335
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ +LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 336 AFLRLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMGLAGGKLILS 395
Query: 315 LEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D P+ S A P S + + L FW L
Sbjct: 396 LEGGYNLRALAEGVSASLHTLLGDPCPILESPSA-PCPSAQASLFCALEALEPFWEVL 452
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 163/384 (42%), Positives = 225/384 (58%)
Query: 14 RVGLLYDERMCKHN---TPDGDY---HPENPNRIKAIWNKLQAAGI---PQRCVV----- 59
+ GL+YD RM H T +Y HPE+P RI I+ KL AGI P +
Sbjct: 118 KTGLVYDVRMRYHAKVFTSYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGP 177
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL---NSIYLNEGSSE 112
+ +EA + +L VH+E+H+ I++ D RD++ + +SIY+N S
Sbjct: 178 FMLKIPIREATSEEILQVHSEDHLKFIQSTE----DMSRDQLLKETETGDSIYVNNDSYL 233
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + ++ AIVRPPGHHAEP+ GFCL++NVAVAA +L
Sbjct: 234 SAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNY 293
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + +I+IVDWD+HHGN TQK F+ DPRVL+ S+HR E G FYP G +GEGP
Sbjct: 294 PE-SVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGP 352
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+ IN+PW + D DY+ ++ I+ PV +F PD+II+S+GFDAA GD +G C VT
Sbjct: 353 GEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVT 412
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL SIS S LA VL+ + P + P
Sbjct: 413 PAGYGYMTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPP-ENTITLRPQAE 471
Query: 353 TWRVIQAVRKKLSAFWPTLADELP 376
V+ V K S ++ +L + +P
Sbjct: 472 AIEVVDEVIKIQSKYFKSLRNGIP 495
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 163/384 (42%), Positives = 225/384 (58%)
Query: 14 RVGLLYDERMCKHN---TPDGDY---HPENPNRIKAIWNKLQAAGI---PQRCVV----- 59
+ GL+YD RM H T +Y HPE+P RI I+ KL AGI P +
Sbjct: 118 KTGLVYDVRMRYHAKVFTSYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGP 177
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL---NSIYLNEGSSE 112
+ +EA + +L VH+E+H+ I++ D RD++ + +SIY+N S
Sbjct: 178 FMLKIPIREATSEEILQVHSEDHLKFIQSTE----DMSRDQLLKETETGDSIYVNNDSYL 233
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + ++ AIVRPPGHHAEP+ GFCL++NVAVAA +L
Sbjct: 234 SAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNY 293
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + +I+IVDWD+HHGN TQK F+ DPRVL+ S+HR E G FYP G +GEGP
Sbjct: 294 PE-SVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGP 352
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+ IN+PW + D DY+ ++ I+ PV +F PD+II+S+GFDAA GD +G C VT
Sbjct: 353 GEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVT 412
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL SIS S LA VL+ + P + P
Sbjct: 413 PAGYGYMTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPP-ENTITLRPQAE 471
Query: 353 TWRVIQAVRKKLSAFWPTLADELP 376
V+ V K S ++ +L + +P
Sbjct: 472 AIEVVDEVIKIQSKYFKSLRNGIP 495
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 185/437 (42%), Positives = 244/437 (55%)
Query: 1 MEVKSGEGRTIKRRVGLLYDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRC 57
+E K G + + +DERM H+ + HPE P+R++AI L AG+ P RC
Sbjct: 136 VEEKYGGSSSATSSTAVGFDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRC 195
Query: 58 VVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYL 116
+ +NA+E + L VHT HV+ + D+ + S S Y NE S+ AA L
Sbjct: 196 LPINAREITKQELQMVHTSEHVDAV--------DTTSQLLYSYFTSDTYANEYSARAARL 247
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
AAG ++A + G + + FA+VRPPGHHA AMGFCL+NN AVAA L+ + G
Sbjct: 248 AAGLCADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAA--LVAQAA--G 303
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
K+LIVDWDVHHGN TQ++F ++ VL+ S+HRHE G FYP G +G G GY
Sbjct: 304 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGT--GAADEVGSNGGEGY 361
Query: 237 NINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY 296
+NVPW G GD DY+ + H++LP+A F PD +IISAGFDAA GDPLG C VTP GY
Sbjct: 362 CVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGY 421
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV 356
S M + L D GK+++ LEGGYNL SIS S A + VLL + P P +T V
Sbjct: 422 SRMTQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENP----ENELPIATTPSV 477
Query: 357 --IQAVRKKLSA---FWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK----VE--TL 405
+Q V L+ FWP+LA L+ L+A S E E VE T
Sbjct: 478 AGLQTVLDVLNIQLEFWPSLAISYSKLLSELEARLIENKSEKSDEKEGCSGSDMVEMGTK 537
Query: 406 EAVLQVALS----KLKV 418
EA +Q++L K+KV
Sbjct: 538 EAFVQLSLGSYDFKIKV 554
>UNIPROTKB|G4NCI1 [details] [associations]
symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
"Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
silencing at telomere" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
chromatin" evidence=ISS] [GO:0031060 "regulation of histone
methylation" evidence=ISS] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
"histone H3 deacetylation" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
Uniprot:G4NCI1
Length = 758
Score = 685 (246.2 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
Identities = 134/318 (42%), Positives = 195/318 (61%)
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN----SIYLNEGSSEAAYLA 117
A+EA + + VH H + +K +S+K R R+ +L+ S+Y+ + EA+ ++
Sbjct: 148 AREATKEEICLVHYAKHYDWVKELSTKPTAQLR-RLTKELDKGQTSVYVGSLTFEASLIS 206
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
AG IE + + G++ + FA++RPPGHHAE D AMGFC++NNV +AA E PE+
Sbjct: 207 AGGAIETCKSIVSGQIKNGFAVIRPPGHHAEQDSAMGFCIFNNVPIAAKVCQAEYPEI-C 265
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND------DGFYTMIGEG 231
K+LI+DWDVHHGN Q +F++DP VL+ S+H ++ G FYP DG + G G
Sbjct: 266 QKVLILDWDVHHGNGIQNVFYEDPNVLYISLHVYKNGEFYPGKPENPMTADGSISSCGSG 325
Query: 232 PGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRV 291
PGLG NIN+ W++ GD +Y+A + I++P+A +F PD++IISAGFDAAAGD LGGC V
Sbjct: 326 PGLGRNINIGWDDQGMGDGEYIAAFQKIIMPIAHEFNPDLVIISAGFDAAAGDQLGGCFV 385
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL-EDKPVAGSSEAYPF 350
TP Y+ M LM A G++ + LEGGYNL +IS S LA L+ E P G +
Sbjct: 386 TPPCYAHMTHMLMSLAHGRVAVCLEGGYNLSAISKSALAVARTLMGEPPPKMGMASPKIN 445
Query: 351 ESTWRVIQAVRKKLSAFW 368
R++ V+ + +W
Sbjct: 446 REAARLLAQVQAYQAPYW 463
Score = 88 (36.0 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 16 GLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI 53
G YD+RM H D G +HPE+P+RI+AI+ + AG+
Sbjct: 82 GCCYDDRMKLHANADFGAGPHHPEDPSRIEAIFKTFKQAGL 122
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 155/373 (41%), Positives = 215/373 (57%)
Query: 4 KSGEGRTIKRRVGLLYDERMCKHNT-PDGDYHPENPNRIKAIWNKLQAAG----IPQRCV 58
+S E I ++ GL YD RM H T + D HPE+P R+ ++ ++ AG +P
Sbjct: 46 ESHEMSQILKKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSD 105
Query: 59 V---LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
V + A+EA + LL VH++ + + N + + + +S+Y N S+ A
Sbjct: 106 VFLRIPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLAN-LEKISDSLYYNNESAFCAR 164
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
LA GS IE V G++ +AFA+VRPPGHHAEP + GFCL+NNV+V A +L P+
Sbjct: 165 LACGSAIETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDK 224
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I ++LIVDWD+HHGN TQ F+ DP VL+ S+HR+E G FYP + G GEGPGLG
Sbjct: 225 -IKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLG 283
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N+PW GD DY+ + +++PVA +F PD++I+S GFDAAAGD +G +TP
Sbjct: 284 RTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAA 343
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
Y+ M + LM A GK+ ++LEGGYNL SIS S LA LL P Y
Sbjct: 344 YAHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPP-GRLHTTYACPQAVA 402
Query: 356 VIQAVRKKLSAFW 368
I V K S +W
Sbjct: 403 TINHVTKIQSQYW 415
>FB|FBgn0041210 [details] [associations]
symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
Bgee:Q8I9J6 Uniprot:Q8I9J6
Length = 1255
Score = 728 (261.3 bits), Expect = 4.3e-71, P = 4.3e-71
Identities = 154/384 (40%), Positives = 229/384 (59%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 822 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 881
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 882 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 938
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 939 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 998
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 999 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1054
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G P LGG
Sbjct: 1055 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1114
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK--PVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1115 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1174
Query: 346 EAYPFESTWRVIQAVRKKLSAFWP 369
E P ++ +Q WP
Sbjct: 1175 ERPPCQNAINTLQKTIAIQQTHWP 1198
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 721 (258.9 bits), Expect = 1.4e-70, P = 1.4e-70
Identities = 134/328 (40%), Positives = 201/328 (61%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 543 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 602
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 603 HTRAHVNTVRRLLGREPKELHDA-AGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 661
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 662 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 718
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 719 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 778
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 779 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 838
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPV 341
LEGGYN+ SIS ++ C LL D PV
Sbjct: 839 CLEGGYNVNSISYAMTMCTKTLLGD-PV 865
Score = 657 (236.3 bits), Expect = 1.4e-65, Sum P(2) = 1.4e-65
Identities = 130/339 (38%), Positives = 196/339 (57%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 112 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 171
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 172 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 231
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 232 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVHK---LQRILIIDYDVHHG 288
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 289 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 348
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 349 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 408
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP 349
+ + LEGGY L S++ + LL D P E P
Sbjct: 409 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVP 446
Score = 45 (20.9 bits), Expect = 1.4e-65, Sum P(2) = 1.4e-65
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 369 PTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSKLKV 418
P D PT+ T++ PP + S++ +++ L A ++++ KV
Sbjct: 501 PPPMDRYPTRDTAIPLPPEKLTSNA------ARLQVLRAETKLSVPSFKV 544
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 712 (255.7 bits), Expect = 4.5e-70, P = 4.5e-70
Identities = 163/417 (39%), Positives = 249/417 (59%)
Query: 16 GLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 600 GLVYDTLMQKHQCMCGNSNIHPEHAGRIQSIWSRLQETGLRGQCECIRGRKATLEELQTV 659
Query: 74 HTENHVNLI-KNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSVIE 123
H+E HV L N ++ DS + +L ++I+ SS AA LA GSV++
Sbjct: 660 HSEAHVLLYGTNPLRQKLDSSVTPMFVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVVD 719
Query: 124 VAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIV 183
+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++KILIV
Sbjct: 720 LVFKVASGELRNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LNVSKILIV 776
Query: 184 DWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE 243
DWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+ +
Sbjct: 777 DWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGS--GAPDEVGIGPGVGFNVNMAFT 834
Query: 244 NGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSV 298
G GDADYLA + +++P+A +F PD++++S+GFDA G P LGG ++T +
Sbjct: 835 GGLEPPMGDADYLAAFTSVVMPIANEFSPDVVLVSSGFDAVEGHPPPLGGYKLTAKCFGY 894
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQ 358
+ K+LM A G++VLALEGG++L +I ++ AC++ LL ++ + IQ
Sbjct: 895 LTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELDPIPEDILQQRPNANAIQ 954
Query: 359 AVRKKL---SAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVA 412
++ K L S +W +L + T SL+ + E+E+ + T A L VA
Sbjct: 955 SMEKVLEVQSKYWRSLQRSVSTLGYSLR-------EAQRCENEEAETVTAMASLSVA 1004
>UNIPROTKB|H9KZE7 [details] [associations]
symbol:H9KZE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007043 "cell-cell
junction assembly" evidence=IEA] [GO:0032703 "negative regulation
of interleukin-2 production" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0071889
"14-3-3 protein binding" evidence=IEA] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AADN02072408
EMBL:AADN02072409 EMBL:AADN02072410 Ensembl:ENSGALT00000010204
Uniprot:H9KZE7
Length = 951
Score = 595 (214.5 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 134/313 (42%), Positives = 194/313 (61%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV E+A +VA EL + FA+VRPPGHHA+P AMGFC +N+VA+AA L
Sbjct: 633 SSNAARWAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAAR-QL 691
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
++ +L +KILIVDWDVHHGN TQ++F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 692 QQKGKL--SKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGS--GAADEVG 747
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP- 285
GPG G+N+N+ W G GD +YLA + +++P+A +F PD++++SAGFDAA G P
Sbjct: 748 AGPGEGFNVNIAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPP 807
Query: 286 -LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL----LEDKP 340
LGG +V+ + M K+LM A G IVLALEGG++L +I ++ A + L L+ P
Sbjct: 808 PLGGYKVSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEAYPSHLSPWQLDPLP 867
Query: 341 VAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDT 400
S P + R ++AV + S +W + +KL+ + + E E+
Sbjct: 868 EE-SMRQKPNANAVRSLEAVIQVQSKYWVAV-QRFASKLS------CSFLEAQHHEAEEV 919
Query: 401 KVETLEAVLQVAL 413
+ T A L VA+
Sbjct: 920 ETVTALASLSVAV 932
Score = 144 (55.7 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L V
Sbjct: 520 GLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCV 579
Query: 74 HTENHVNL 81
HTE HV L
Sbjct: 580 HTERHVFL 587
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 150/366 (40%), Positives = 212/366 (57%)
Query: 16 GLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQ-----RCVV------LNA 62
GL YD +M H P D HPE+P RI I+ +L AG+ R +V ++A
Sbjct: 126 GLCYDVQMRYHCEVRPTSDVHPEDPRRIYYIYKELCRAGLVDDIESTRPLVARPLKRIHA 185
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A ++ + VHT H +++ D + +SIY N + ++ L+ G I
Sbjct: 186 RNATEEEISLVHTAAHYAFVESTKDMS-DEELIALEHTRDSIYFNNLTFASSLLSVGGAI 244
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV+VAA + +R L KI+I
Sbjct: 245 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAAR-VCQQRLGLSCRKIMI 303
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
+DWDVHHGN QK F+ DP VL+ S+H ++ G+FYP DG G G G G N+N+PW
Sbjct: 304 LDWDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPW 363
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GD DY+ + +++P+A++F PD++II++GFDAAAGD LGGC VTP Y+ M
Sbjct: 364 PSQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGFDAAAGDTLGGCFVTPACYAHMTHM 423
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
LM AQGK+ + LEGGYN SIS S LA L+ + P S P E+ I+ V
Sbjct: 424 LMTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMGNPPDRLSFTC-PSEAAISTIRRVSS 482
Query: 363 KLSAFW 368
S +W
Sbjct: 483 IQSDYW 488
>UNIPROTKB|Q8WUI4 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
Pathway_Interaction_DB:ar_tf_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
Ensembl:ENST00000354334 Ensembl:ENST00000427332
Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
Length = 952
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 156/387 (40%), Positives = 233/387 (60%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 514 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 573
Query: 67 DKNLLSVHTENHVNLIKN--ISSKQFDSRR--DRIASKL-------------NSIYLNEG 109
+ L SVH+E HV L +S + D+ + +A ++ ++I+
Sbjct: 574 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 633
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 634 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 693
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 694 QQSKA---SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 748
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP- 285
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G P
Sbjct: 749 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 808
Query: 286 -LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
LGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 809 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 868
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 869 EEGWKQKPNLNAIRSLEAVIRVHSKYW 895
>UNIPROTKB|F1N616 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
protein binding" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032703
"negative regulation of interleukin-2 production" evidence=IEA]
[GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
Length = 988
Score = 693 (249.0 bits), Expect = 3.9e-68, P = 3.9e-68
Identities = 165/435 (37%), Positives = 251/435 (57%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++L G+ +C L ++A
Sbjct: 550 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLLERGLRSQCESLRGRKAS 609
Query: 67 DKNLLSVHTENHVNLIKN--ISSKQFDSRR--DRIASKL-------------NSIYLNEG 109
+ L SVH+E HV L +S + D+ + +A ++ ++I+
Sbjct: 610 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 669
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 670 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 729
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 730 QQGKA---SKILIVDWDVHHGNGTQQTFYQDPNVLYISLHRHDDGNFFPGS--GAVDEVG 784
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP- 285
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G P
Sbjct: 785 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPP 844
Query: 286 -LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
LGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 845 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 904
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E + P + R ++AV + S +W + +L S H + +D+E+
Sbjct: 905 EEGWKQKPNLNAIRSLEAVIRVHSEYWGCMQ-----RLASRPDSWVHRVPGADAEE---- 955
Query: 402 VETLEAVLQVALSKL 416
VE + A+ +++ L
Sbjct: 956 VEAVTALASLSVGIL 970
>UNIPROTKB|F1PK81 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090050 "positive regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0032703 "negative regulation of interleukin-2 production"
evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
"protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
Length = 951
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 156/387 (40%), Positives = 232/387 (59%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 513 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 572
Query: 67 DKNLLSVHTENHVNLIKN--ISSKQFDSRR--DRIASKL-------------NSIYLNEG 109
+ L SVH+E HV L +S + D+ + +A ++ ++I+
Sbjct: 573 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 632
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 633 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 692
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILI+DWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 693 QQGKA---SKILIMDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 747
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP- 285
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G P
Sbjct: 748 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRMVVMPIAREFSPDLVLVSAGFDAAEGHPA 807
Query: 286 -LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
LGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 808 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 867
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 868 EEGWKQKPNLNAIRSLEAVIRVHSKYW 894
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 592 (213.5 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 119/244 (48%), Positives = 167/244 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA +A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L
Sbjct: 175 SSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYL- 233
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
R +L I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G
Sbjct: 234 --RDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVG 289
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G GYN+N+ W G GD +YL + +++PVA++F PD++++SAGFDA G
Sbjct: 290 VGLGEGYNVNIAWTGGLDPPMGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHTP 349
Query: 285 PLGGCRVTPY--GYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVA 342
PLGG +VT G+ + K+LM A G++ LALEGG++L +I ++ AC+N LL ++P
Sbjct: 350 PLGGYKVTAKCNGFGHLTKQLMTLANGRVALALEGGHDLTAICDASEACINALLGNEP-- 407
Query: 343 GSSE 346
GS E
Sbjct: 408 GSLE 411
Score = 117 (46.2 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + + V
Sbjct: 62 GIAYDCLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLV 121
Query: 74 HTENH 78
H+E+H
Sbjct: 122 HSEHH 126
>UNIPROTKB|F1LSN5 [details] [associations]
symbol:F1LSN5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 IPI:IPI01016416
Ensembl:ENSRNOT00000011159 ArrayExpress:F1LSN5 Uniprot:F1LSN5
Length = 932
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 168/437 (38%), Positives = 250/437 (57%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L SV
Sbjct: 502 GLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSV 561
Query: 74 HTENHVNLIKN--ISSKQFDSRR-DRIASKLNSIYL-------------NE-GSSEAAYL 116
H+E HV L +S + D+ + + ++ + L NE SS AA
Sbjct: 562 HSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAARW 621
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 622 AAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHGKA-- 679
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
+KILIVDWDVHHGN TQ+ F++DPRVL+ S+HRH+ G F+P + G +G G G G+
Sbjct: 680 -SKILIVDWDVHHGNGTQQTFYQDPRVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEGF 736
Query: 237 NINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRV 291
N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G P LGG V
Sbjct: 737 NVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHV 796
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY--- 348
+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 797 SAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSQESWKQK 856
Query: 349 PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAV 408
P + R ++AV + +W + +L S P + +D+E VE + A+
Sbjct: 857 PNLNAIRSLEAVVRVHRKYWGCMQ-----RLASCPDPWLPRVPGADAE-----VEAVTAL 906
Query: 409 LQVALSKLKVDDGHAEL 425
+++ L D EL
Sbjct: 907 ASLSVGILAEDRPSKEL 923
>RGD|619979 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA;ISO] [GO:0010882
"regulation of cardiac muscle contraction by calcium ion signaling"
evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
"histone deacetylation" evidence=ISO;IMP] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
"potassium ion binding" evidence=IEA;ISO] [GO:0031594
"neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0033613
"activating transcription factor binding" evidence=IEA;ISO]
[GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0042641
"actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043393 "regulation of protein binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
of skeletal muscle fiber development" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
[GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
[GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
"histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
Genevestigator:Q99P99 Uniprot:Q99P99
Length = 1077
Score = 694 (249.4 bits), Expect = 8.6e-68, P = 8.6e-68
Identities = 161/419 (38%), Positives = 246/419 (58%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 653 GLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 712
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSVI 122
H+E H L ++ ++ DS + +L ++I+ SS AA LA G V+
Sbjct: 713 HSEAHTLLYGTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVV 772
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++KILI
Sbjct: 773 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LNVSKILI 829
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+ +
Sbjct: 830 VDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAF 887
Query: 243 ENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYS 297
G GDA+YLA + +++P+A +F PD++++S+GFDA G P LGG ++ +
Sbjct: 888 TGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFG 947
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFESTW 354
+ K+LM A G+IVLALEGG++L +I ++ AC++ LL E +P+ P +
Sbjct: 948 YLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAV 1007
Query: 355 RVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
++ V S +W L PT SL I + E+E+ + T A L V +
Sbjct: 1008 HSMEKVMGIHSEYWRCLQRLSPTVGHSL-------IEAQKCENEEAETVTAMASLSVGV 1059
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 156/378 (41%), Positives = 216/378 (57%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL YD+ M +H G+ H EN RI++IW+KL G Q+C + AK+A + L V
Sbjct: 463 GLGYDQAMVRHECCCGNNASHVENGGRIQSIWSKLIEHGHVQKCEKVTAKKASLEQLQLV 522
Query: 74 HTENHVNL--IKNISSKQFDSRRDRIASKL----------NSIYLNEGSSE-AAYLAAGS 120
H++ + + + + D+ + L + Y N+ S++ AA LAAG+
Sbjct: 523 HSQTYTTFFAVSPTACLKIDANSLPLKRFLQLPCGGIGVDSDTYFNDASTQTAARLAAGT 582
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
+IE++ +VAEG L + FA +RPPGHHAE ++AMGFC +NNVAVA L + P KI
Sbjct: 583 LIELSSQVAEGRLKNGFACIRPPGHHAEHEQAMGFCFFNNVAVAVKVLQTKYPAQ-CAKI 641
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
I+DWDVHHGN TQ F DP VL+ S+HRH+ G F+P G T +G+ G +NV
Sbjct: 642 AIIDWDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPGT--GSVTEVGKNDAKGLTVNV 699
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSV 298
P+ D +YLA W ++ PV F PD II+SAGFDA G P LGG VTP +
Sbjct: 700 PFSGDVMRDPEYLAAWRTVIEPVMASFCPDFIIVSAGFDACHGHPNALGGYEVTPEMFGY 759
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG--SS---EAYPFEST 353
M K L+++A GK+VLALEGGY+L SIS + C+ L+ + AG SS E+ P S
Sbjct: 760 MTKSLLNYASGKVVLALEGGYDLKSISEAAQQCVQALIGESDDAGRLSSVALESLPNPSA 819
Query: 354 WRVIQAVRKKLSAFWPTL 371
+Q V ++WP L
Sbjct: 820 VETLQKVIAIHKSYWPAL 837
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 144/404 (35%), Positives = 233/404 (57%)
Query: 17 LLYDERMCKH----NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+YDE M +H N P D E P R+ A + +LQ + +RCV + A+E ++ +L
Sbjct: 7 LIYDEAMTRHKLLWNDPICDI--EVPERLSASYEQLQCYHLVERCVPVPAREGSEEEILL 64
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ H+ K+ + + + RI+ +S + + + A LA G+ +++ + V G+
Sbjct: 65 VHSSEHLEAAKSTQTMNEEELK-RISGNYDSFFFHPNTYHCARLAVGAALQLVDSVMSGK 123
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ + A GFCL+NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 124 VCNGMALVRPPGHHSQRNAANGFCLFNNVAIAAEYA---KLKYGLQRILIVDWDVHHGQG 180
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F +D VL+FS HR+E F+P+ + Y +G G G G+NIN+PW G++DY
Sbjct: 181 TQYIFEEDQSVLYFSWHRYEHQEFWPSLKESDYDAVGLGKGKGFNINLPWNKVGMGNSDY 240
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
LA + H+LLPVA +F P+++++S+G+D+ GDP G TP ++ + LM A GK+
Sbjct: 241 LAAFFHVLLPVAFEFDPELVLVSSGYDSGIGDPEGQMNATPEVFAHLTHFLMQLAHGKLC 300
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
+ LEGGY+L S+S SV + LL D + E P S IQ VR +W L
Sbjct: 301 VILEGGYHLKSLSESVCMTVKTLLRDPLPQVTGEMAPCLSAIESIQNVRAAHKPYWKWLT 360
Query: 373 DELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSKL 416
E + L +L + + ++D D + + + +E L++ + +
Sbjct: 361 YEDTSFLHNLSTR-SDLPKTADITDSN-ETDKIERFLELHMKNV 402
>MGI|MGI:3036234 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IGI] [GO:0004407
"histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
[GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP;IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
"protein complex" evidence=ISO] [GO:0043393 "regulation of protein
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045820 "negative regulation of
glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070555 "response
to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
Uniprot:Q6NZM9
Length = 1076
Score = 687 (246.9 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 159/419 (37%), Positives = 246/419 (58%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 652 GLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 711
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSVI 122
H+E H L ++ ++ DS + +L ++I+ SS AA LA G V+
Sbjct: 712 HSEAHTLLYGTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVV 771
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R L ++KILI
Sbjct: 772 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR--LNVSKILI 828
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+ +
Sbjct: 829 VDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAF 886
Query: 243 ENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYS 297
G GDA+YLA + +++P+A +F PD++++S+GFDA G P LGG ++ +
Sbjct: 887 TGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFG 946
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFESTW 354
+ K+LM A G++VLALEGG++L +I ++ AC++ LL E +P+ P +
Sbjct: 947 YLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAV 1006
Query: 355 RVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
++ V S +W L +L+S +I + E E+ + T A L V +
Sbjct: 1007 HSMEKVMDIHSKYWRCLQ-----RLSSTVGHS--LIEAQKCEKEEAETVTAMASLSVGV 1058
>MGI|MGI:1891835 [details] [associations]
symbol:Hdac7 "histone deacetylase 7" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007043 "cell-cell junction assembly" evidence=IMP] [GO:0007399
"nervous system development" evidence=TAS] [GO:0008134
"transcription factor binding" evidence=TAS] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=ISO] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=ISO] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
evidence=ISO] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=ISO]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:1891835
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0007399
GO:GO:0046872 GO:GO:0006954 GO:GO:0006351 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 GO:GO:0030183 GO:GO:0001570
GO:GO:0008134 GO:GO:0007043 GO:GO:0045668 GO:GO:0071889
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 HOGENOM:HOG000232065
HOVERGEN:HBG057100 CTD:51564 KO:K11408 OrthoDB:EOG4NKBV4
ChiTaRS:HDAC7 EMBL:AF207749 EMBL:AK030863 EMBL:AK036586
EMBL:AK044287 EMBL:AK088828 EMBL:AK088945 EMBL:BC057332
IPI:IPI00227380 IPI:IPI00315371 IPI:IPI00315372 IPI:IPI00315373
IPI:IPI00315375 IPI:IPI00315376 RefSeq:NP_001191204.1
RefSeq:NP_001191205.1 RefSeq:NP_001191206.1 RefSeq:NP_001191207.1
RefSeq:NP_062518.2 UniGene:Mm.384027 ProteinModelPortal:Q8C2B3
SMR:Q8C2B3 DIP:DIP-42594N IntAct:Q8C2B3 MINT:MINT-1551781
STRING:Q8C2B3 PhosphoSite:Q8C2B3 PaxDb:Q8C2B3 PRIDE:Q8C2B3
Ensembl:ENSMUST00000079838 Ensembl:ENSMUST00000088402
Ensembl:ENSMUST00000116408 Ensembl:ENSMUST00000116409
Ensembl:ENSMUST00000118294 GeneID:56233 KEGG:mmu:56233
UCSC:uc007xld.1 UCSC:uc007xle.1 UCSC:uc007xlf.1 UCSC:uc007xlg.1
UCSC:uc007xlh.1 UCSC:uc007xlj.1 OMA:AFRIVVM BindingDB:Q8C2B3
ChEMBL:CHEMBL4219 NextBio:312136 PMAP-CutDB:Q8C2B3 Bgee:Q8C2B3
CleanEx:MM_HDAC7 Genevestigator:Q8C2B3
GermOnline:ENSMUSG00000022475 Uniprot:Q8C2B3
Length = 938
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 156/380 (41%), Positives = 228/380 (60%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L SV
Sbjct: 508 GLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSV 567
Query: 74 HTENHVNLIKN--ISSKQFDSRR-DRIASKLNSIYL-------------NE-GSSEAAYL 116
H+E HV L +S + D+ + + ++ + L NE SS AA
Sbjct: 568 HSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAARW 627
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 628 AAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHGKA-- 685
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G+
Sbjct: 686 -SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEGF 742
Query: 237 NINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRV 291
N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G P LGG V
Sbjct: 743 NVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHV 802
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY--- 348
+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 803 SAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQK 862
Query: 349 PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 863 PNLSAIRSLEAVVRVHRKYW 882
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 141/345 (40%), Positives = 202/345 (58%)
Query: 14 RVGLLYDERMCKHN---TPDGDY---HPENPNRIKAIWNKLQAAGI---PQRCVV----- 59
+ GL YD RM H T +Y HPE+P RI I+ L G+ P V
Sbjct: 57 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGD 116
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ + A + +L VHT+ H+ I++ + K + K +S+Y N S +A
Sbjct: 117 LMLKIPVRAATSEEILEVHTKEHLEFIES-TEKMSREELLKETEKGDSVYFNNDSYASAR 175
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L G IE + V EG + ++ A+VRPPGHHAEP A GFCL++NVAVAA +L PE
Sbjct: 176 LPCGGAIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPE- 234
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +I+I+DWD+HHGN TQK F++D +VL+ S+HR E G +YP G Y GEG G G
Sbjct: 235 SVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEG 294
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N N+ W G GDA+Y+ ++ +++P+ ++F PD++IIS+GFDAA GD +G C VTP
Sbjct: 295 FNCNITWPVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSC 354
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL +I+ S L+ VL+ + P
Sbjct: 355 YGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPP 399
>UNIPROTKB|F1NWX8 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
of cardiac muscle contraction by calcium ion signaling"
evidence=IEA] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
"regulation of protein binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
Length = 1071
Score = 671 (241.3 bits), Expect = 8.5e-67, Sum P(2) = 8.5e-67
Identities = 154/430 (35%), Positives = 248/430 (57%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 645 GLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 704
Query: 74 HTENHVNLIKN--ISSKQFDSRR-----------DRIASKLNSIYLNEGSSEAAYLAAGS 120
H+E H L ++ ++ DS++ + ++I+ SS AA LA G
Sbjct: 705 HSEAHTLLYGTNPLNRQKLDSKKLLGIVHLSFVGTAVGVDSDTIWNEVHSSGAARLAVGC 764
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
VIE+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++KI
Sbjct: 765 VIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LNVSKI 821
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
LIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G+G+N+N+
Sbjct: 822 LIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNM 879
Query: 241 PWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYG 295
+ G GD +YL + +++P+A +F PD++++S+GFDA G P LGG ++
Sbjct: 880 AFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKC 939
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
+ + K+LM A G++VLALEGG++L +I ++ AC++ LL ++ + +
Sbjct: 940 FGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANAN 999
Query: 356 VIQAVRKKL---SAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVA 412
+ ++ K + S +W +L T SL + + E+E+ + T A L V
Sbjct: 1000 AVHSMEKVIEIHSKYWHSLQRYASTVGYSL-------VEAQKCENEEAETVTAMASLSVG 1052
Query: 413 L--SKLKVDD 420
+ ++ + DD
Sbjct: 1053 VKPAEKRPDD 1062
Score = 39 (18.8 bits), Expect = 8.5e-67, Sum P(2) = 8.5e-67
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 615 YTNTLIKGLVEGKQLSEEEAKAYIHEAS 642
Y +T+ LVE ++ EEA+ AS
Sbjct: 1021 YASTVGYSLVEAQKCENEEAETVTAMAS 1048
>UNIPROTKB|J3KPH8 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
Length = 1014
Score = 682 (245.1 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 151/376 (40%), Positives = 227/376 (60%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 570 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 629
Query: 67 DKNLLSVHTENHVNLIKN--ISSKQFDSRR--DRIASKL-------------NSIYLNEG 109
+ L SVH+E HV L +S + D+ + +A ++ ++I+
Sbjct: 630 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 689
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 690 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 749
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 750 QQSKA---SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 804
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP- 285
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G P
Sbjct: 805 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 864
Query: 286 -LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
LGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 865 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 924
Query: 345 SEAYPFESTWRVIQAV 360
E + + I+++
Sbjct: 925 EEGWKQKPNLNAIRSL 940
>UNIPROTKB|F1NP26 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
Uniprot:F1NP26
Length = 1062
Score = 571 (206.1 bits), Expect = 1.3e-66, Sum P(2) = 1.3e-66
Identities = 126/329 (38%), Positives = 198/329 (60%)
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
++I+ SS AA LA G VIE+ +VA GEL + FA+VRPPGHHAE MGFC +N+V
Sbjct: 737 DTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSV 796
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND 221
A+AA LL +R L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P +
Sbjct: 797 AIAAK-LLQQR--LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS- 852
Query: 222 DGFYTMIGEGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
G +G G G+G+N+N+ + G GD +YL + +++P+A +F PD++++S+GF
Sbjct: 853 -GAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGF 911
Query: 279 DAAAGDP--LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
DA G P LGG ++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 912 DAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALL 971
Query: 337 EDKPVAGSSEAYPFESTWRVIQAVRKKL---SAFWPTLADELPTKLTSLKAPPAHMISSS 393
++ + + + ++ K + S +W +L T SL + +
Sbjct: 972 GNELDPLPEKVLQQRANANAVHSMEKVIEIHSKYWHSLQRYASTVGYSL-------VEAQ 1024
Query: 394 DSEDEDTKVETLEAVLQVAL--SKLKVDD 420
E+E+ + T A L V + ++ + DD
Sbjct: 1025 KCENEEAETVTAMASLSVGVKPAEKRPDD 1053
Score = 142 (55.0 bits), Expect = 1.3e-66, Sum P(2) = 1.3e-66
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 629 GLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 688
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKLNSIY 105
H+E H L ++ ++ DS++ + ++ IY
Sbjct: 689 HSEAHTLLYGTNPLNRQKLDSKKLLVVGSISIIY 722
Score = 39 (18.8 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 615 YTNTLIKGLVEGKQLSEEEAKAYIHEAS 642
Y +T+ LVE ++ EEA+ AS
Sbjct: 1012 YASTVGYSLVEAQKCENEEAETVTAMAS 1039
>TAIR|locus:2159431 [details] [associations]
symbol:AT5G61050 "AT5G61050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB006696
IPI:IPI00523892 RefSeq:NP_200913.1 UniGene:At.55651
ProteinModelPortal:Q9FNQ9 EnsemblPlants:AT5G61050.1 GeneID:836226
KEGG:ath:AT5G61050 TAIR:At5g61050 eggNOG:NOG29674 PhylomeDB:Q9FNQ9
Genevestigator:Q9FNQ9 Uniprot:Q9FNQ9
Length = 252
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 126/219 (57%), Positives = 159/219 (72%)
Query: 428 ATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTF 487
+T WR +L+KVDV+YAS+GSNMWK RF+CYI+GGQ EGM K C GS D++PPKEI+WKTF
Sbjct: 34 STSWRIDLAKVDVWYASYGSNMWKPRFICYIQGGQAEGMIKACVGSMDKSPPKEIMWKTF 93
Query: 488 PHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENVYSDDVSS 547
PH L FG ++S WG GGVA+ NP + + ++CLYRITLEQFND+L QEN + D
Sbjct: 94 PHRLLFGRETSMFWGVGGVAYTNPLTNLNDQTHMCLYRITLEQFNDLLFQENELNVDSDY 153
Query: 548 PLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFP 607
P FD L + ++SL+ + Y NVV LGKE IPILT+TC+LS V KFKSGE P
Sbjct: 154 PFFDLAALRLAEKEGSISLQTASDSLYGNVVCLGKEGVIPILTLTCTLSVVEKFKSGEIP 213
Query: 608 LRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
+R PA Y NTLI+GLV+G + S EEA+AYI A++K L
Sbjct: 214 IRPPAKAYANTLIRGLVKGGRFSIEEAEAYIDNAASKPL 252
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 154/406 (37%), Positives = 241/406 (59%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKN--ISSKQFD 91
HPE+ RI++IW++LQ G+ +C + ++A + L +VH+E H L ++ ++ D
Sbjct: 259 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLD 318
Query: 92 SRRDRIASKLNSIYL---------------NE-GSSEAAYLAAGSVIEVAERVAEGELNS 135
S++ + L S+++ NE S+ AA LA G V+E+ +VA GEL +
Sbjct: 319 SKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKN 376
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
FA+VRPPGHHAE MGFC +N+VAVAA LL +R L ++KILIVDWDVHHGN TQ+
Sbjct: 377 GFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR--LSVSKILIVDWDVHHGNGTQQ 433
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR---CGDADY 252
F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+ + G GDA+Y
Sbjct: 434 AFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEY 491
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSVMLKKLMDFAQGK 310
LA + +++P+A +F PD++++S+GFDA G P LGG ++ + + K+LM A G+
Sbjct: 492 LAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGR 551
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK--PVAGSS-EAYPFESTWRVIQAVRKKLSAF 367
IVLALEGG++L +I ++ AC++ LL ++ P+ + P + R ++ V + S +
Sbjct: 552 IVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVMEIHSKY 611
Query: 368 WPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
W L T SL I + E+E+ + T A L V +
Sbjct: 612 WRCLQRTTSTAGRSL-------IEAQTCENEEAETVTAMASLSVGV 650
Score = 397 (144.8 bits), Expect = 2.6e-34, P = 2.6e-34
Identities = 106/324 (32%), Positives = 171/324 (52%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 239 GLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 298
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV----AER 127
H+E H L ++ ++ DS++ + L S+++ + EV A R
Sbjct: 299 HSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAAR 356
Query: 128 VAEG---ELNSAFAIVRPPGHHA--EP-----DEAMGFCLYNNVAVAASFLLNERPELGI 177
+A G EL A A P +E+ +VA + L ++ L +
Sbjct: 357 LAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQ-RLSV 415
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
+KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N
Sbjct: 416 SKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFN 473
Query: 238 INVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPY 294
+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G P TP
Sbjct: 474 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHP------TPL 527
Query: 295 GYSVMLKKLMDFAQGKIVLALEGG 318
G + + + K ++ L GG
Sbjct: 528 GGYNLSARCFGYLT-KQLMGLAGG 550
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 140/400 (35%), Positives = 220/400 (55%)
Query: 9 RTIKRRVG--LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE 64
+++K G L++DE M ++ D E P R+ + L+ G+ QRC + ++
Sbjct: 50 KSVKMASGSALIFDEEMSRYKLLWTDPACEIEVPERLTVSYEALRTHGLAQRCKAVPVRQ 109
Query: 65 AKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV 124
A ++ +L H+E ++ +K + + K N +Y ++ A LAAG+ +++
Sbjct: 110 ATEQEILLAHSEEYLEAVKQTPGMNVEELM-AFSKKYNDVYFHQNIYHCAKLAAGATLQL 168
Query: 125 AERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVD 184
+ V + E+ + A+VRPPGHH++ A GFC++NNVA+AA L + +N+ILIVD
Sbjct: 169 VDSVMKREVRNGMALVRPPGHHSQRSAANGFCVFNNVAIAA---LYAKKNYNLNRILIVD 225
Query: 185 WDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN 244
WDVHHG Q F +DP VL+FS HR+E +F+P + Y+ +G+G G G+NIN+PW
Sbjct: 226 WDVHHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYSSVGKGKGSGFNINLPWNK 285
Query: 245 GRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM 304
++DYLA + H+LLPVA +F P+++I+SAGFD+A GDP G P ++ + LM
Sbjct: 286 VGMTNSDYLAAFFHVLLPVAYEFDPELVIVSAGFDSAIGDPEGEMCALPEIFAHLTHLLM 345
Query: 305 DFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKL 364
A GK+ + LEGGYNL S+ SV ++ LL D S +S IQ VR
Sbjct: 346 PLAAGKMCVVLEGGYNLTSLGQSVCQTVHSLLGDPTPRISGLGTACDSALESIQNVRNVQ 405
Query: 365 SAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVET 404
S++W + L T+ K P + E + E+
Sbjct: 406 SSYWSSFK-HLAQSETNPKRPRLDATNGGPKESSEPASES 444
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 137/366 (37%), Positives = 216/366 (59%)
Query: 14 RVGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
R L+Y E M D + E P R+ A +LQ G+ QRC+ L +EA + L
Sbjct: 2 RTALVYHEDMTAARLLWEDPECEIERPERLTAALRRLQQGGLEQRCLQLAPREASEAELG 61
Query: 72 SVHTENHVNLIKNISSKQFDSRRDR-IASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
VH+ +V+L++ ++ D++ R ++ + +++Y + + A LA G+ +++ + V
Sbjct: 62 LVHSPEYVSLLRG--TQALDTQELRALSGQYDAVYFHPSTFHCARLAVGAALQLVDAVLM 119
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G +++ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 120 GAVHNGLALVRPPGHHSQRAAANGFCVFNNVAIAAR---HAQQKHGLQRILIVDWDVHHG 176
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
Q +F DP VL+FS HR+E G F+P + +G+G G G+ +N+PW G+A
Sbjct: 177 QGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNA 236
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA + H+LLPVA +F P+++++SAGFD+A GDP G + TP + + + L A G+
Sbjct: 237 DYLAAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQVLAGGR 296
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK--PVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
+ LEGGY+L S+S SV + LL D P++G E P S IQ+VR + W
Sbjct: 297 VCAVLEGGYHLESLSQSVCMVVRALLGDPVPPLSGPME--PHRSALESIQSVRAAQAPHW 354
Query: 369 PTLADE 374
+L +
Sbjct: 355 TSLQQQ 360
>UNIPROTKB|P56524 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0030183 "B cell
differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
"regulation of protein binding" evidence=IMP] [GO:0030955
"potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
"response to denervation involved in regulation of muscle
adaptation" evidence=ISS] [GO:0045820 "negative regulation of
glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0033613 "activating transcription
factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
GO:GO:0010882 Uniprot:P56524
Length = 1084
Score = 663 (238.4 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 154/406 (37%), Positives = 241/406 (59%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKN--ISSKQFD 91
HPE+ RI++IW++LQ G+ +C + ++A + L +VH+E H L ++ ++ D
Sbjct: 675 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLD 734
Query: 92 SRRDRIASKLNSIYL---------------NE-GSSEAAYLAAGSVIEVAERVAEGELNS 135
S++ + L S+++ NE S+ AA LA G V+E+ +VA GEL +
Sbjct: 735 SKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKN 792
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
FA+VRPPGHHAE MGFC +N+VAVAA LL +R L ++KILIVDWDVHHGN TQ+
Sbjct: 793 GFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR--LSVSKILIVDWDVHHGNGTQQ 849
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR---CGDADY 252
F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+ + G GDA+Y
Sbjct: 850 AFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEY 907
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSVMLKKLMDFAQGK 310
LA + +++P+A +F PD++++S+GFDA G P LGG ++ + + K+LM A G+
Sbjct: 908 LAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGR 967
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK--PVAGSS-EAYPFESTWRVIQAVRKKLSAF 367
IVLALEGG++L +I ++ AC++ LL ++ P+ + P + R ++ V + S +
Sbjct: 968 IVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVMEIHSKY 1027
Query: 368 WPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
W L T SL I + E+E+ + T A L V +
Sbjct: 1028 WRCLQRTTSTAGRSL-------IEAQTCENEEAETVTAMASLSVGV 1066
Score = 397 (144.8 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 106/324 (32%), Positives = 171/324 (52%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 655 GLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 714
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV----AER 127
H+E H L ++ ++ DS++ + L S+++ + EV A R
Sbjct: 715 HSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAAR 772
Query: 128 VAEG---ELNSAFAIVRPPGHHA--EP-----DEAMGFCLYNNVAVAASFLLNERPELGI 177
+A G EL A A P +E+ +VA + L ++ L +
Sbjct: 773 LAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQ-RLSV 831
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
+KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N
Sbjct: 832 SKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFN 889
Query: 238 INVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPY 294
+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G P TP
Sbjct: 890 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHP------TPL 943
Query: 295 GYSVMLKKLMDFAQGKIVLALEGG 318
G + + + K ++ L GG
Sbjct: 944 GGYNLSARCFGYLT-KQLMGLAGG 966
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 661 (237.7 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 150/406 (36%), Positives = 243/406 (59%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKN--ISSKQFD 91
HPE+ RI++IW++LQ G+ +C + ++A + L +VH+E H L ++ ++ D
Sbjct: 675 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSETHALLYGTNPLNRQKLD 734
Query: 92 SRRDRIASKLNSIYL---------------NE-GSSEAAYLAAGSVIEVAERVAEGELNS 135
S++ + L S+++ NE SS AA LA G V+E+ +VA GEL +
Sbjct: 735 SKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKN 792
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++K L+VDWDVHHGN TQ+
Sbjct: 793 GFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LSVSKTLVVDWDVHHGNGTQQ 849
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR---CGDADY 252
F+ DPRVL+ S+HR++ G F+P + G +G G G+G+N+N+ + G GDA+Y
Sbjct: 850 AFYSDPRVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGLDPPMGDAEY 907
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSVMLKKLMDFAQGK 310
LA + +++P+A +F PD++++S+GFDA G P LGG ++ + + K+LM A G+
Sbjct: 908 LAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGR 967
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK--PVAGSS-EAYPFESTWRVIQAVRKKLSAF 367
+VLALEGG++L +I ++ AC++ LL ++ P+ + P + R ++ V + S +
Sbjct: 968 VVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVIEIHSQY 1027
Query: 368 WPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
W +L +L S ++ + E+E+ + T A L VA+
Sbjct: 1028 WRSLQ-----RLASTAG--YSLVEAQKCENEEAETVTAMASLSVAV 1066
Score = 396 (144.5 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 105/324 (32%), Positives = 171/324 (52%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 655 GLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 714
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV----AER 127
H+E H L ++ ++ DS++ + L S+++ + EV A R
Sbjct: 715 HSETHALLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAAR 772
Query: 128 VAEG---ELNSAFAIVRPPGHHA--EP-----DEAMGFCLYNNVAVAASFLLNERPELGI 177
+A G EL A A P +E+ +VA + L ++ L +
Sbjct: 773 LAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQ-RLSV 831
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
+K L+VDWDVHHGN TQ+ F+ DPRVL+ S+HR++ G F+P + G +G G G+G+N
Sbjct: 832 SKTLVVDWDVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFN 889
Query: 238 INVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPY 294
+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G P TP
Sbjct: 890 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHP------TPL 943
Query: 295 GYSVMLKKLMDFAQGKIVLALEGG 318
G + K + K ++ L GG
Sbjct: 944 GGYNLSAKCFGYLT-KQLMGLAGG 966
>UNIPROTKB|I3LM52 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
Uniprot:I3LM52
Length = 1052
Score = 660 (237.4 bits), Expect = 4.0e-64, P = 4.0e-64
Identities = 149/406 (36%), Positives = 244/406 (60%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKN--ISSKQFD 91
HPE+ RI++IW++LQ G+ +C + ++A + L +VH+E H L ++ ++ D
Sbjct: 643 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHALLYGTNPLNRQKLD 702
Query: 92 SRRDRIASKLNSIYLN-----EG-----------SSEAAYLAAGSVIEVAERVAEGELNS 135
S++ + L S+++ G SS AA LA G V+E+A +VA GEL +
Sbjct: 703 SKK--LLGSLTSVFVRLPCGGVGVDSDTIWSEVHSSGAARLAVGCVVELAFKVATGELKN 760
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++K L+VDWDVHHGN TQ+
Sbjct: 761 GFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LHVSKTLVVDWDVHHGNGTQQ 817
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR---CGDADY 252
F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+ + G GDA+Y
Sbjct: 818 AFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEY 875
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSVMLKKLMDFAQGK 310
LA + +++P+A +F PD++++S+GFDA G P LGG ++ + + K+LM A G+
Sbjct: 876 LAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGR 935
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK--PVAGSS-EAYPFESTWRVIQAVRKKLSAF 367
+VLALEGG++L +I ++ AC++ LL ++ P+ + P++++ R ++ V S +
Sbjct: 936 VVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPYDNSVRSMEKVIDIHSQY 995
Query: 368 WPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
W +L +L S ++ + E+E+ + T A L V +
Sbjct: 996 WRSLQ-----RLASTVG--YSLVEAQKCENEEAETVTAMASLSVGV 1034
Score = 396 (144.5 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 103/324 (31%), Positives = 172/324 (53%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 623 GLVYDTLMLKHQCACGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 682
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV----AER 127
H+E H L ++ ++ DS++ + L S+++ + EV A R
Sbjct: 683 HSEAHALLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWSEVHSSGAAR 740
Query: 128 VAEG-ELNSAFAIVRPPGHHA----EP-----DEAMGFCLYNNVAVAASFLLNERPELGI 177
+A G + AF + + P +E+ +VA + L ++ L +
Sbjct: 741 LAVGCVVELAFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQ-RLHV 799
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
+K L+VDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N
Sbjct: 800 SKTLVVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGVGFN 857
Query: 238 INVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPY 294
+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G P TP
Sbjct: 858 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP------TPL 911
Query: 295 GYSVMLKKLMDFAQGKIVLALEGG 318
G + K + K ++ L GG
Sbjct: 912 GGYNLSAKCFGYLT-KQLMGLAGG 934
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 133/374 (35%), Positives = 219/374 (58%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G +
Sbjct: 65 SPEYVSLVRETQVLGKEELQ-ALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQ 123
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH + A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG Q
Sbjct: 124 NGLALVRPPGHHGQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQGIQ 180
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 181 YLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVA 240
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 241 AFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAV 300
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +L +
Sbjct: 301 LEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQQQ 360
Query: 375 LPTKLTSLKAPPAH 388
T + +P +H
Sbjct: 361 DVTAVPM--SPSSH 372
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 137/375 (36%), Positives = 219/375 (58%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A + L+ G+ +RC+ L+A EA ++ L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEERCLCLSACEASEEELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASK-LNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ ++ L++ ++ D SK N++Y + + A LAAG+ +++ + V G +
Sbjct: 65 SPEYIALVQK--TQTLDKEELHALSKQYNAVYFHPDTFHCARLAAGAALQLVDAVLTGAV 122
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
++ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 123 HNGLALVRPPGHHSQRAAANGFCVFNNVALAAK---HAKQKYGLQRILIVDWDVHHGQGI 179
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F DP VL+FS HR+E G+F+P + +G+G G G+ +N+PW G+ADYL
Sbjct: 180 QYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQVGMGNADYL 239
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G+I
Sbjct: 240 AAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRICA 299
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDK--PVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D P+ G P +S IQ+V+ + +W +L
Sbjct: 300 VLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLM--VPCQSALESIQSVQTAQTPYWTSL 357
Query: 372 ADELPTKLTSLKAPP 386
+ L+S P
Sbjct: 358 QQNVAPVLSSSTHSP 372
>UNIPROTKB|F1PRU6 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
Length = 1084
Score = 650 (233.9 bits), Expect = 5.9e-63, P = 5.9e-63
Identities = 136/326 (41%), Positives = 209/326 (64%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKN--ISSKQFD 91
HPE+ RI++IW++LQ G+ +C + ++A + L +VH+E H L ++ ++ D
Sbjct: 674 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLD 733
Query: 92 SRRDRIASKLNSIYL---------------NE-GSSEAAYLAAGSVIEVAERVAEGELNS 135
S++ + L S+++ NE SS AA LA G V+E+ +VA GEL +
Sbjct: 734 SKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKN 791
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++K LIVDWDVHHGN TQ+
Sbjct: 792 GFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LDVSKTLIVDWDVHHGNGTQQ 848
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR---CGDADY 252
F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+ + G GDA+Y
Sbjct: 849 AFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEY 906
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSVMLKKLMDFAQGK 310
LA + +++P+A +F PD++++S+GFDA G P LGG ++ + + K+LM A G+
Sbjct: 907 LAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGR 966
Query: 311 IVLALEGGYNLGSISNSVLACMNVLL 336
IVLALEGG++L +I ++ AC++ LL
Sbjct: 967 IVLALEGGHDLTAICDASEACVSALL 992
Score = 397 (144.8 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 106/324 (32%), Positives = 171/324 (52%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 654 GLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 713
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV----AER 127
H+E H L ++ ++ DS++ + L S+++ + EV A R
Sbjct: 714 HSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAAR 771
Query: 128 VAEG---ELNSAFAIVRPPGHHA--EP-----DEAMGFCLYNNVAVAASFLLNERPELGI 177
+A G EL A A P +E+ +VA + L ++ L +
Sbjct: 772 LAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQ-RLDV 830
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
+K LIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N
Sbjct: 831 SKTLIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGPGVGFN 888
Query: 238 INVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPY 294
+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G P TP
Sbjct: 889 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP------TPL 942
Query: 295 GYSVMLKKLMDFAQGKIVLALEGG 318
G + K + K ++ L GG
Sbjct: 943 GGYNLSAKCFGYLT-KQLMGLAGG 965
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 643 (231.4 bits), Expect = 1.3e-62, P = 1.3e-62
Identities = 125/323 (38%), Positives = 195/323 (60%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE-AKDKNLLSVHT 75
+ ++E H + D HPE P R + I L+ +G+ ++CV N + A ++ + VHT
Sbjct: 429 IYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHT 488
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE---GE 132
+ + ++ + + + + + NSIYL + + A A G+V++ + + E G+
Sbjct: 489 KKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQ 548
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
N A IVRPPGHHA ++ GFC++NNVAVAA + ++LI+DWDVHHGN
Sbjct: 549 RN-ALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKA---KRVLILDWDVHHGNG 604
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++D V++ S+HRH+ G FYP + Y+ +GEG G G ++NVP+ + GD +Y
Sbjct: 605 TQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEY 664
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ +++P+A F PD+++ISAGFDAA DPLG +VTP +++M +L A G+I+
Sbjct: 665 QMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRII 724
Query: 313 LALEGGYNLGSISNSVLACMNVL 335
LEGGYNL SISNS A VL
Sbjct: 725 TVLEGGYNLTSISNSAQAVCEVL 747
Score = 630 (226.8 bits), Expect = 3.9e-61, P = 3.9e-61
Identities = 150/382 (39%), Positives = 211/382 (55%)
Query: 7 EGRTIKRRVG--LL-YDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL-NA 62
E R R G L+ +++ +H HPE+ +RI I L I ++C VL N
Sbjct: 4 EDRQKNRSTGPTLIGFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCTVLTNF 63
Query: 63 KEAKDKNLLSVHTENHV-NLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSV 121
E D +L H ++ V +L+++ Q D K +S+++ E S + A V
Sbjct: 64 LEIDDADLEVTHDKSMVKDLMESEKKTQEDINSQ--CEKYDSVFMTENSMKVAKDGVACV 121
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
++ R+ E ++ FA+VRPPGHHA+ GFCL+NNVA AA E G +IL
Sbjct: 122 RDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAE----EAFFSGAERIL 177
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVD DVHHG+ TQ++F+ D RVL+FS+HRHE G F+P + + IG G GLGYN N+
Sbjct: 178 IVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLA 237
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLK 301
C D+DYL++ H+LLP+A F P +IISAGFDA GDPLGG +TP GYS +L
Sbjct: 238 LNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILY 297
Query: 302 KLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVR 361
L AQG++++ LEGGYN + +V C+ VLL P + P EST ++
Sbjct: 298 HLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSIELNEAPKESTVDSCVSLV 357
Query: 362 KKLSAFWPTLADELPTKLTSLK 383
L W D P++ TSL+
Sbjct: 358 SVLRHHWNCF-DYFPSR-TSLR 377
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 643 (231.4 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 125/323 (38%), Positives = 195/323 (60%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE-AKDKNLLSVHT 75
+ ++E H + D HPE P R + I L+ +G+ ++CV N + A ++ + VHT
Sbjct: 431 IYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHT 490
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE---GE 132
+ + ++ + + + + + NSIYL + + A A G+V++ + + E G+
Sbjct: 491 KKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQ 550
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
N A IVRPPGHHA ++ GFC++NNVAVAA + ++LI+DWDVHHGN
Sbjct: 551 RN-ALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKA---KRVLILDWDVHHGNG 606
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++D V++ S+HRH+ G FYP + Y+ +GEG G G ++NVP+ + GD +Y
Sbjct: 607 TQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEY 666
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ +++P+A F PD+++ISAGFDAA DPLG +VTP +++M +L A G+I+
Sbjct: 667 QMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRII 726
Query: 313 LALEGGYNLGSISNSVLACMNVL 335
LEGGYNL SISNS A VL
Sbjct: 727 TVLEGGYNLTSISNSAQAVCEVL 749
Score = 619 (223.0 bits), Expect = 6.6e-60, P = 6.6e-60
Identities = 150/384 (39%), Positives = 211/384 (54%)
Query: 7 EGRTIKRRVG--LL-YDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL-NA 62
E R R G L+ +++ +H HPE+ +RI I L I ++C VL N
Sbjct: 4 EDRQKNRSTGPTLIGFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCTVLTNF 63
Query: 63 KEAKDKNLLSVHTENHV-NLIKNISSKQFDSRRDRIASKLNSIYLNE--GSSEAAYLAAG 119
E D +L H ++ V +L+++ Q D K +S+++ E S + A
Sbjct: 64 LEIDDADLEVTHDKSMVKDLMESEKKTQEDINSQ--CEKYDSVFMTEFQNSMKVAKDGVA 121
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
V ++ R+ E ++ FA+VRPPGHHA+ GFCL+NNVA AA E G +
Sbjct: 122 CVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAE----EAFFSGAER 177
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
ILIVD DVHHG+ TQ++F+ D RVL+FS+HRHE G F+P + + IG G GLGYN N
Sbjct: 178 ILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNAN 237
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+ C D+DYL++ H+LLP+A F P +IISAGFDA GDPLGG +TP GYS +
Sbjct: 238 LALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHI 297
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQA 359
L L AQG++++ LEGGYN + +V C+ VLL P + P EST +
Sbjct: 298 LYHLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSIELNEAPKESTVDSCVS 357
Query: 360 VRKKLSAFWPTLADELPTKLTSLK 383
+ L W D P++ TSL+
Sbjct: 358 LVSVLRHHWNCF-DYFPSR-TSLR 379
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 643 (231.4 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 125/323 (38%), Positives = 195/323 (60%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE-AKDKNLLSVHT 75
+ ++E H + D HPE P R + I L+ +G+ ++CV N + A ++ + VHT
Sbjct: 431 IYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHT 490
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE---GE 132
+ + ++ + + + + + NSIYL + + A A G+V++ + + E G+
Sbjct: 491 KKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQ 550
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
N A IVRPPGHHA ++ GFC++NNVAVAA + ++LI+DWDVHHGN
Sbjct: 551 RN-ALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKA---KRVLILDWDVHHGNG 606
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++D V++ S+HRH+ G FYP + Y+ +GEG G G ++NVP+ + GD +Y
Sbjct: 607 TQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEY 666
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ +++P+A F PD+++ISAGFDAA DPLG +VTP +++M +L A G+I+
Sbjct: 667 QMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRII 726
Query: 313 LALEGGYNLGSISNSVLACMNVL 335
LEGGYNL SISNS A VL
Sbjct: 727 TVLEGGYNLTSISNSAQAVCEVL 749
Score = 619 (223.0 bits), Expect = 6.6e-60, P = 6.6e-60
Identities = 150/384 (39%), Positives = 211/384 (54%)
Query: 7 EGRTIKRRVG--LL-YDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL-NA 62
E R R G L+ +++ +H HPE+ +RI I L I ++C VL N
Sbjct: 4 EDRQKNRSTGPTLIGFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCTVLTNF 63
Query: 63 KEAKDKNLLSVHTENHV-NLIKNISSKQFDSRRDRIASKLNSIYLNE--GSSEAAYLAAG 119
E D +L H ++ V +L+++ Q D K +S+++ E S + A
Sbjct: 64 LEIDDADLEVTHDKSMVKDLMESEKKTQEDINSQ--CEKYDSVFMTEFQNSMKVAKDGVA 121
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
V ++ R+ E ++ FA+VRPPGHHA+ GFCL+NNVA AA E G +
Sbjct: 122 CVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAE----EAFFSGAER 177
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
ILIVD DVHHG+ TQ++F+ D RVL+FS+HRHE G F+P + + IG G GLGYN N
Sbjct: 178 ILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNAN 237
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+ C D+DYL++ H+LLP+A F P +IISAGFDA GDPLGG +TP GYS +
Sbjct: 238 LALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHI 297
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQA 359
L L AQG++++ LEGGYN + +V C+ VLL P + P EST +
Sbjct: 298 LYHLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSIELNEAPKESTVDSCVS 357
Query: 360 VRKKLSAFWPTLADELPTKLTSLK 383
+ L W D P++ TSL+
Sbjct: 358 LVSVLRHHWNCF-DYFPSR-TSLR 379
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 136/363 (37%), Positives = 210/363 (57%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ +LQ G+ QRC+ L A+EA + L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIECPERLTTALERLQQHGLKQRCLQLVAREASEAELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASK-LNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ +V L++ ++ +R + SK +++YL+ + A LA G+ +++ + V G +
Sbjct: 65 SPEYVALLQG--TQALGTRELQALSKEYDAVYLHPSTFHCARLAVGAALQLVDAVLTGAV 122
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 123 RNGLALVRPPGHHSQRATANGFCVFNNVAIAAK---HAQQKHGLRRILIVDWDVHHGQGI 179
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+
Sbjct: 180 QYIFEDDPSVLYFSWHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQVGMGNADYV 239
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + H+LLP+A +F P+++++SAGFD+A GDP G TP ++ + L A G++
Sbjct: 240 AAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMLATPECFAHLTHLLQVLAGGRVCA 299
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDK--PVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S+S SV + LL D P++G E P S +Q VR + W +L
Sbjct: 300 VLEGGYHLESLSQSVCMMVRALLGDPALPLSGPME--PHGSALESLQCVRAAQAPHWVSL 357
Query: 372 ADE 374
+
Sbjct: 358 QQQ 360
>UNIPROTKB|P83038 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0008134 "transcription factor binding" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
Uniprot:P83038
Length = 1080
Score = 642 (231.1 bits), Expect = 4.3e-62, P = 4.3e-62
Identities = 149/415 (35%), Positives = 241/415 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKN--ISSKQFD 91
HPE+ RI++IW++LQ G+ +C + ++A + L +VH+E H L ++ ++ D
Sbjct: 671 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLD 730
Query: 92 SRRDRIASKLNSIYL---------------NE-GSSEAAYLAAGSVIEVAERVAEGELNS 135
S++ + L S+++ NE SS AA LA G VIE+ +VA GEL +
Sbjct: 731 SKK--LLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVIELVFKVATGELKN 788
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++KILIVDWDVHHGN TQ+
Sbjct: 789 GFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LNVSKILIVDWDVHHGNGTQQ 845
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR---CGDADY 252
F+ DP VL+ S+HR++ G F+P + G +G G G+G+N+N+ + G GD +Y
Sbjct: 846 AFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEY 903
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSVMLKKLMDFAQGK 310
L + +++P+A +F PD++++S+GFDA G P LGG ++ + + K+LM A G+
Sbjct: 904 LTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGR 963
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKL---SAF 367
+VLALEGG++L +I ++ AC++ LL ++ + + + ++ K + S +
Sbjct: 964 VVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSMEKVIEIHSKY 1023
Query: 368 WPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL--SKLKVDD 420
W +L T SL + + E+E+ + T A L V + ++ + DD
Sbjct: 1024 WHSLQRYASTVGYSL-------VEAQKCENEEAETVTAMASLSVGVKPAEKRPDD 1071
Score = 385 (140.6 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 104/324 (32%), Positives = 169/324 (52%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 651 GLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 710
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV----AER 127
H+E H L ++ ++ DS++ + L S+++ + EV A R
Sbjct: 711 HSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAAR 768
Query: 128 VAEG---ELNSAFAIVRPPGHHA--EP-----DEAMGFCLYNNVAVAASFLLNERPELGI 177
+A G EL A A P +E+ +VA + L ++ L +
Sbjct: 769 LAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQ-RLNV 827
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
+KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G+G+N
Sbjct: 828 SKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFN 885
Query: 238 INVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPY 294
+N+ + G GD +YL + +++P+A +F PD++++S+GFDA G P TP
Sbjct: 886 VNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP------TPL 939
Query: 295 GYSVMLKKLMDFAQGKIVLALEGG 318
G + K + K ++ L GG
Sbjct: 940 GGYNLSAKCFGYLT-KQLMGLAGG 962
Score = 39 (18.8 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 615 YTNTLIKGLVEGKQLSEEEAKAYIHEAS 642
Y +T+ LVE ++ EEA+ AS
Sbjct: 1030 YASTVGYSLVEAQKCENEEAETVTAMAS 1057
>UNIPROTKB|F1RXT2 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
Length = 677
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 138/403 (34%), Positives = 223/403 (55%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ +L+ G+ QRC+ L A+EA + L VH
Sbjct: 5 LVYHEDMTAARLLWDDPECEIERPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V L++ + + + ++ + +++Y + + A LAAG+ +++ + V G +
Sbjct: 65 SPEYVALLRGTQALSTEELQ-ALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVR 123
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH++ A GFC++N+VA+AA + + + G+++ILIVDWD+HHG TQ
Sbjct: 124 NGLALVRPPGHHSQRAAANGFCVFNSVAIAAK---HAQQKHGLHRILIVDWDIHHGQGTQ 180
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 181 YIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMA 240
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ +LLP+A +F +++++SAGFD+A GD G + TP ++ + + L A G++
Sbjct: 241 AFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAV 300
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGY+L S+S SV + LL D S P S + IQ+VR + W +L +
Sbjct: 301 LEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQAPHWMSLRQQ 360
Query: 375 -LPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSKL 416
+ L+S P S + K +AV ALS L
Sbjct: 361 GVAPVLSSSTRSPGQGPSPPMPAGPEFKTAAAQAV--AALSSL 401
>UNIPROTKB|I3LDD6 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
Length = 677
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 138/403 (34%), Positives = 223/403 (55%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ +L+ G+ QRC+ L A+EA + L VH
Sbjct: 7 LVYHEDMTAARLLWDDPECEIERPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVH 66
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V L++ + + + ++ + +++Y + + A LAAG+ +++ + V G +
Sbjct: 67 SPEYVALLRGTQALSTEELQ-ALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVR 125
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH++ A GFC++N+VA+AA + + + G+++ILIVDWD+HHG TQ
Sbjct: 126 NGLALVRPPGHHSQRAAANGFCVFNSVAIAAK---HAQQKHGLHRILIVDWDIHHGQGTQ 182
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 183 YIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMA 242
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ +LLP+A +F +++++SAGFD+A GD G + TP ++ + + L A G++
Sbjct: 243 AFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAV 302
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGY+L S+S SV + LL D S P S + IQ+VR + W +L +
Sbjct: 303 LEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQAPHWMSLRQQ 362
Query: 375 -LPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSKL 416
+ L+S P S + K +AV ALS L
Sbjct: 363 GVAPVLSSSTRSPGQGPSPPMPAGPEFKTAAAQAV--AALSSL 403
>UNIPROTKB|Q9UKV0 [details] [associations]
symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
"B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
response" evidence=TAS] [GO:0042113 "B cell activation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0048742
"regulation of skeletal muscle fiber development" evidence=ISS]
[GO:0051153 "regulation of striated muscle cell differentiation"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
"histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
"positive regulation of cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
Ensembl:ENST00000405010 Ensembl:ENST00000406451
Ensembl:ENST00000417496 Ensembl:ENST00000432645
Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
GermOnline:ENSG00000048052 Uniprot:Q9UKV0
Length = 1011
Score = 594 (214.2 bits), Expect = 5.1e-57, P = 5.1e-57
Identities = 121/240 (50%), Positives = 165/240 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA +A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L
Sbjct: 747 SSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL- 805
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
R +L I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G
Sbjct: 806 --RDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVG 861
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G GYNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G
Sbjct: 862 TGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTP 921
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
PLGG +VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 922 PLGGYKVTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 981
Score = 365 (133.5 bits), Expect = 3.6e-30, P = 3.6e-30
Identities = 98/289 (33%), Positives = 147/289 (50%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + + V
Sbjct: 634 GIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLV 693
Query: 74 HTENHVNLIKN--ISSKQFDSR---RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
H+E+H L + ++ D R D +S+ ++ + A R+
Sbjct: 694 HSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAARM 753
Query: 129 AEG---ELNSAFA--------IVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
A G EL S A V P H + + N + L R +L I
Sbjct: 754 AVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL--RDQLNI 811
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G GYN
Sbjct: 812 SKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYN 869
Query: 238 INVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG 283
IN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G
Sbjct: 870 INIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEG 918
>UNIPROTKB|F1LQG9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
Uniprot:F1LQG9
Length = 826
Score = 584 (210.6 bits), Expect = 9.8e-57, P = 9.8e-57
Identities = 109/232 (46%), Positives = 159/232 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L
Sbjct: 501 SSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL- 559
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 560 --QQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVG 615
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 616 GGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 675
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 676 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 727
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 591 (213.1 bits), Expect = 1.4e-56, P = 1.4e-56
Identities = 126/270 (46%), Positives = 176/270 (65%)
Query: 81 LIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAI 139
L+ + S K F S + ++I+ SS AA +A G VIE+A +VA GEL + FA+
Sbjct: 719 LLGDTSQKIFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAV 778
Query: 140 VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWK 199
VRPPGHHAE AMGFC +N+VA+ A +L R +L I+KILIVD DVHHGN TQ+ F+
Sbjct: 779 VRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQLNISKILIVDLDVHHGNGTQQAFYA 835
Query: 200 DPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR---CGDADYLAVW 256
DP +L+ S+HR++ G F+P + G +G G G GYNIN+ W G GD +YL +
Sbjct: 836 DPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEAF 893
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
++ PVAK+F PD++++SAGFDA G PLGG +VT + + K+LM A G +VLA
Sbjct: 894 RTVVTPVAKEFDPDMVLVSAGFDALEGHAPPLGGYKVTAKCFGHLTKQLMTLADGHVVLA 953
Query: 315 LEGGYNLGSISNSVLACMNVLL--EDKPVA 342
LEGG++L +I ++ AC+N LL E +P+A
Sbjct: 954 LEGGHDLTAICDASEACVNALLGNELEPLA 983
Score = 366 (133.9 bits), Expect = 3.1e-30, P = 3.1e-30
Identities = 100/291 (34%), Positives = 149/291 (51%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + + V
Sbjct: 636 GIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLV 695
Query: 74 HTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SSEAAYLAAGSVIEVAE 126
H+E+H L + ++ D R + K+ S G S+ + S A
Sbjct: 696 HSEHHSLLYGTNPLDGQKLDPRTLLGDTSQKIFSSLPCGGLGVDSDTIWNELHS--SGAA 753
Query: 127 RVAEG---ELNSAFA--------IVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
R+A G EL S A V P H + + N + L R +L
Sbjct: 754 RMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL--RDQL 811
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 812 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 869
Query: 236 YNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG 283
YNIN+ W G GD +YL + ++ PVAK+F PD++++SAGFDA G
Sbjct: 870 YNINIAWTGGLDPPMGDIEYLEAFRTVVTPVAKEFDPDMVLVSAGFDALEG 920
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 108/232 (46%), Positives = 158/232 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L
Sbjct: 337 SSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL- 395
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 396 --QQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVG 451
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 452 GGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 511
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 512 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 563
Score = 407 (148.3 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 101/307 (32%), Positives = 164/307 (53%)
Query: 16 GLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +V
Sbjct: 224 GVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTV 283
Query: 74 HTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SSEAAYLAAGSVIEVAE 126
H+E H L ++ ++ DS++ I+ K+ ++ G S+ + S A
Sbjct: 284 HSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHS--SSAV 341
Query: 127 RVAEGEL-NSAFAI----------VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
R+A G L AF + + P H + + N + LL ++ L
Sbjct: 342 RMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQK--L 399
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 400 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 457
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G ++
Sbjct: 458 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEG------HLS 511
Query: 293 PYG-YSV 298
P G YSV
Sbjct: 512 PLGGYSV 518
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 584 (210.6 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 109/232 (46%), Positives = 159/232 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L
Sbjct: 583 SSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL- 641
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 642 --QQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVG 697
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 698 GGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 757
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 758 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 809
Score = 407 (148.3 bits), Expect = 5.5e-35, P = 5.5e-35
Identities = 104/316 (32%), Positives = 169/316 (53%)
Query: 10 TIKRRV---GLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE 64
T++R V G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++
Sbjct: 461 TVERGVCGSGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRK 520
Query: 65 AKDKNLLSVHTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SSEAAYLA 117
A + +VH+E H L ++ ++ DS++ I+ K+ ++ G S+ +
Sbjct: 521 ATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNE 580
Query: 118 AGSVIEVAERVAEGEL-NSAFAI----------VRPPGHHAEPDEAMGFCLYNNVAVAAS 166
S A R+A G L AF + + P H + + N +
Sbjct: 581 MHS--SSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITA 638
Query: 167 FLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYT 226
LL ++ L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G
Sbjct: 639 KLLQQK--LSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPE 694
Query: 227 MIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG 283
+G GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 695 EVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEG 754
Query: 284 DPLGGCRVTPYG-YSV 298
++P G YSV
Sbjct: 755 ------HLSPLGGYSV 764
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 584 (210.6 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 109/232 (46%), Positives = 159/232 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L
Sbjct: 583 SSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL- 641
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 642 --QQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVG 697
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 698 GGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 757
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 758 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 809
Score = 404 (147.3 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 101/307 (32%), Positives = 164/307 (53%)
Query: 16 GLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +V
Sbjct: 470 GVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTV 529
Query: 74 HTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SSEAAYLAAGSVIEVAE 126
H+E H L ++ ++ DS++ I+ K+ ++ G S+ + S A
Sbjct: 530 HSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHS--SSAV 587
Query: 127 RVAEGEL-NSAFAI----------VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
R+A G L AF + + P H + + N + LL ++ L
Sbjct: 588 RMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQK--L 645
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 646 SVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 703
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G ++
Sbjct: 704 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEG------HLS 757
Query: 293 PYG-YSV 298
P G YSV
Sbjct: 758 PLGGYSV 764
>MGI|MGI:1333784 [details] [associations]
symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=IPI]
[GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
"transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
"histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
"heart development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
differentiation" evidence=IDA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
"response to drug" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043393 "regulation of protein binding"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
fiber development" evidence=IGI] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0061333 "renal tubule
morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=ISO] [GO:0071498 "cellular response to
fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
of cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:2000179 "positive regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=IMP] InterPro:IPR017320
PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
Length = 1113
Score = 587 (211.7 bits), Expect = 4.4e-56, P = 4.4e-56
Identities = 109/232 (46%), Positives = 160/232 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L
Sbjct: 788 SSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL- 846
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 847 --QQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVG 902
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G
Sbjct: 903 GGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLS 962
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 963 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1014
Score = 405 (147.6 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 101/307 (32%), Positives = 165/307 (53%)
Query: 16 GLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +V
Sbjct: 675 GVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQTV 734
Query: 74 HTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SSEAAYLAAGSVIEVAE 126
H+E H L ++ ++ DS++ I+ K+ ++ G S+ + S A
Sbjct: 735 HSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHS--SSAV 792
Query: 127 RVAEGEL-NSAFAI----------VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
R+A G L AF + + P H + + N + LL ++ L
Sbjct: 793 RMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQK--L 850
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 851 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 908
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
YN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G ++
Sbjct: 909 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEG------HLS 962
Query: 293 PYG-YSV 298
P G YSV
Sbjct: 963 PLGGYSV 969
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 585 (211.0 bits), Expect = 7.2e-56, P = 7.2e-56
Identities = 109/232 (46%), Positives = 159/232 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L
Sbjct: 786 SSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL- 844
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 845 --QQKLNVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVG 900
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 901 GGPGMGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 960
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 961 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1012
Score = 405 (147.6 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 101/307 (32%), Positives = 164/307 (53%)
Query: 16 GLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +V
Sbjct: 673 GVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTV 732
Query: 74 HTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SSEAAYLAAGSVIEVAE 126
H+E H L ++ ++ DS++ I+ K+ ++ G S+ + S A
Sbjct: 733 HSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHS--SSAV 790
Query: 127 RVAEGEL-NSAFAI----------VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
R+A G L AF + + P H + + N + LL ++ L
Sbjct: 791 RMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQK--L 848
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 849 NVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGMG 906
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G ++
Sbjct: 907 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEG------HLS 960
Query: 293 PYG-YSV 298
P G YSV
Sbjct: 961 PLGGYSV 967
>UNIPROTKB|Q9UQL6 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0010830 "regulation of myotube differentiation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
protein binding" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
Ensembl:ENST00000225983 Ensembl:ENST00000336057
Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
GO:GO:0090051 Uniprot:Q9UQL6
Length = 1122
Score = 584 (210.6 bits), Expect = 9.5e-56, P = 9.5e-56
Identities = 109/232 (46%), Positives = 159/232 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L
Sbjct: 797 SSSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL- 855
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 856 --QQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVG 911
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 912 GGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 971
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 972 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1023
Score = 410 (149.4 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 104/322 (32%), Positives = 170/322 (52%)
Query: 3 VKSGEGRTIKR--RVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCV 58
+KS + +K G++YD M KH G+ HPE+ RI++IW++LQ G+ +C
Sbjct: 669 MKSPPDQPVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCE 728
Query: 59 VLNAKEAKDKNLLSVHTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SS 111
+ ++A + +VH+E H L ++ ++ DS++ I+ K+ ++ G S
Sbjct: 729 RIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDS 788
Query: 112 EAAYLAAGSVIEVAERVAEG-ELNSAFAI----------VRPPGHHAEPDEAMGFCLYNN 160
+ + S A R+A G L AF + + P H + + N
Sbjct: 789 DTVWNEMHS--SSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFN 846
Query: 161 VAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAN 220
+ LL ++ L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P +
Sbjct: 847 SVAITAKLLQQK--LNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS 904
Query: 221 DDGFYTMIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAG 277
G +G GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAG
Sbjct: 905 --GAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAG 962
Query: 278 FDAAAGDPLGGCRVTPYG-YSV 298
FDA G ++P G YSV
Sbjct: 963 FDAVEG------HLSPLGGYSV 978
>UNIPROTKB|E1C7C0 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0032869 "cellular response to
insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
Length = 1069
Score = 582 (209.9 bits), Expect = 1.3e-55, P = 1.3e-55
Identities = 117/262 (44%), Positives = 170/262 (64%)
Query: 81 LIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAI 139
L+ N+S K F + ++++ S+ AA +A G VIE+A RVA EL + FA+
Sbjct: 718 LLGNVSQKLFSLLPCGGLGVDSDTVWNELHSAGAARMAVGCVIELAARVASRELKNGFAV 777
Query: 140 VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWK 199
VRPPGHHAE AMGFC +N++A+ A +L R +L I KILIVD DVHHGN TQ+ F+
Sbjct: 778 VRPPGHHAEESTAMGFCFFNSIAITAKYL---RDKLNIGKILIVDLDVHHGNGTQQAFYA 834
Query: 200 DPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR---CGDADYLAVW 256
DP +L+ S+HR++ G F+P + G +G GPG G+NIN+ W G GD +YL +
Sbjct: 835 DPSILYVSLHRYDEGNFFPGS--GAPNEVGSGPGEGFNINIAWTGGLDPPMGDVEYLTAF 892
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+++P A +F P+I+++SAGFDA G PLGG +VT + + K+L+ A G++VLA
Sbjct: 893 RTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKVTAKCFGHLTKQLLKLADGRVVLA 952
Query: 315 LEGGYNLGSISNSVLACMNVLL 336
LEGG++L +I ++ AC+N LL
Sbjct: 953 LEGGHDLTAICDASEACINALL 974
Score = 395 (144.1 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 101/294 (34%), Positives = 156/294 (53%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G++YD M KH G+Y HPE+ RI++IW++LQ G+ +C + ++A + + V
Sbjct: 635 GVVYDSLMLKHQCMCGNYANHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQLV 694
Query: 74 HTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SSEAAYLAAGSVIEVAE 126
H+E+H L ++ ++ D R+ ++ KL S+ G S+ + S A
Sbjct: 695 HSEHHSLLYGTSPLNRQKLDPRKLLGNVSQKLFSLLPCGGLGVDSDTVWNELHSA--GAA 752
Query: 127 RVAEG---ELNSAFA--------IVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
R+A G EL + A V P H + + N + L R +L
Sbjct: 753 RMAVGCVIELAARVASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYL--RDKL 810
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G GPG G
Sbjct: 811 NIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGS--GAPNEVGSGPGEG 868
Query: 236 YNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG-DP 285
+NIN+ W G GD +YL + +++P A +F P+I+++SAGFDA G DP
Sbjct: 869 FNINIAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDP 922
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 582 (209.9 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 108/232 (46%), Positives = 158/232 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L
Sbjct: 765 SSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL- 823
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 824 --QQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVG 879
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 880 GGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 939
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 940 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 991
Score = 406 (148.0 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 101/307 (32%), Positives = 164/307 (53%)
Query: 16 GLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +V
Sbjct: 652 GVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTV 711
Query: 74 HTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SSEAAYLAAGSVIEVAE 126
H+E H L ++ ++ DS++ I+ K+ ++ G S+ + S A
Sbjct: 712 HSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHS--SSAV 769
Query: 127 RVAEGEL-NSAFAI----------VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
R+A G L AF + + P H + + N + LL ++ L
Sbjct: 770 RMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQK--L 827
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 828 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGIG 885
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G ++
Sbjct: 886 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEG------HLS 939
Query: 293 PYG-YSV 298
P G YSV
Sbjct: 940 PLGGYSV 946
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 582 (209.9 bits), Expect = 1.5e-55, P = 1.5e-55
Identities = 108/232 (46%), Positives = 158/232 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L
Sbjct: 792 SSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL- 850
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 851 --QQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVG 906
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 907 GGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 966
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 967 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1018
Score = 406 (148.0 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 101/307 (32%), Positives = 164/307 (53%)
Query: 16 GLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +V
Sbjct: 679 GVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTV 738
Query: 74 HTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SSEAAYLAAGSVIEVAE 126
H+E H L ++ ++ DS++ I+ K+ ++ G S+ + S A
Sbjct: 739 HSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHS--SSAV 796
Query: 127 RVAEGEL-NSAFAI----------VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
R+A G L AF + + P H + + N + LL ++ L
Sbjct: 797 RMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQK--L 854
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 855 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGIG 912
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G ++
Sbjct: 913 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEG------HLS 966
Query: 293 PYG-YSV 298
P G YSV
Sbjct: 967 PLGGYSV 973
>UNIPROTKB|Q5R902 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
Uniprot:Q5R902
Length = 1122
Score = 582 (209.9 bits), Expect = 1.6e-55, P = 1.6e-55
Identities = 109/232 (46%), Positives = 159/232 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L
Sbjct: 797 SSSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL- 855
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 856 --QQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVG 911
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 912 GGPGVGYNVNVAWIGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 971
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 972 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1023
Score = 402 (146.6 bits), Expect = 3.2e-34, P = 3.2e-34
Identities = 103/322 (31%), Positives = 169/322 (52%)
Query: 3 VKSGEGRTIKR--RVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCV 58
+KS + +K G++YD M KH G+ HPE+ RI++ W++LQ G+ +C
Sbjct: 669 MKSPPDQPVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSTWSRLQETGLLSKCE 728
Query: 59 VLNAKEAKDKNLLSVHTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SS 111
+ ++A + +VH+E H L ++ ++ DS++ I+ K+ ++ G S
Sbjct: 729 RIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKVDSKKLLGPISQKMYAVLPCGGIGVDS 788
Query: 112 EAAYLAAGSVIEVAERVAEG-ELNSAFAI----------VRPPGHHAEPDEAMGFCLYNN 160
+ + S A R+A G L AF + + P H + + N
Sbjct: 789 DTVWNEMHS--SSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFN 846
Query: 161 VAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAN 220
+ LL ++ L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P +
Sbjct: 847 SVAITAKLLQQK--LNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS 904
Query: 221 DDGFYTMIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAG 277
G +G GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAG
Sbjct: 905 --GAPEEVGGGPGVGYNVNVAWIGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAG 962
Query: 278 FDAAAGDPLGGCRVTPYG-YSV 298
FDA G ++P G YSV
Sbjct: 963 FDAVEG------HLSPLGGYSV 978
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 581 (209.6 bits), Expect = 2.0e-55, P = 2.0e-55
Identities = 108/232 (46%), Positives = 158/232 (68%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L
Sbjct: 800 SSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL- 858
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 859 --QQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVG 914
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 915 GGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 974
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 975 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1026
Score = 405 (147.6 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 101/307 (32%), Positives = 164/307 (53%)
Query: 16 GLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +V
Sbjct: 687 GVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTV 746
Query: 74 HTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG---SSEAAYLAAGSVIEVAE 126
H+E H L ++ ++ DS++ I+ K+ ++ G S+ + S A
Sbjct: 747 HSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHS--SSAV 804
Query: 127 RVAEGEL-NSAFAI----------VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
R+A G L AF + + P H + + N + LL ++ L
Sbjct: 805 RMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQK--L 862
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 863 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 920
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G ++
Sbjct: 921 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEG------HLS 974
Query: 293 PYG-YSV 298
P G YSV
Sbjct: 975 PLGGYSV 981
>UNIPROTKB|F1NES1 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
Uniprot:F1NES1
Length = 1054
Score = 571 (206.1 bits), Expect = 1.9e-54, P = 1.9e-54
Identities = 126/329 (38%), Positives = 198/329 (60%)
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
++I+ SS AA LA G VIE+ +VA GEL + FA+VRPPGHHAE MGFC +N+V
Sbjct: 729 DTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSV 788
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND 221
A+AA LL +R L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P +
Sbjct: 789 AIAAK-LLQQR--LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS- 844
Query: 222 DGFYTMIGEGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
G +G G G+G+N+N+ + G GD +YL + +++P+A +F PD++++S+GF
Sbjct: 845 -GAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGF 903
Query: 279 DAAAGDP--LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
DA G P LGG ++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 904 DAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALL 963
Query: 337 EDKPVAGSSEAYPFESTWRVIQAVRKKL---SAFWPTLADELPTKLTSLKAPPAHMISSS 393
++ + + + ++ K + S +W +L T SL + +
Sbjct: 964 GNELDPLPEKVLQQRANANAVHSMEKVIEIHSKYWHSLQRYASTVGYSL-------VEAQ 1016
Query: 394 DSEDEDTKVETLEAVLQVAL--SKLKVDD 420
E+E+ + T A L V + ++ + DD
Sbjct: 1017 KCENEEAETVTAMASLSVGVKPAEKRPDD 1045
Score = 409 (149.0 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 103/326 (31%), Positives = 172/326 (52%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 624 GLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 683
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI-EV----AE 126
H+E H L ++ ++ DS++ + + ++++ + + ++ EV A
Sbjct: 684 HSEAHTLLYGTNPLNRQKLDSKK--LLDVITTVFIGTPVGGVNVVDSDTIWNEVHSSGAA 741
Query: 127 RVAEG-ELNSAFAI----------VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
R+A G + F + V P H + Y N A+ LL +R L
Sbjct: 742 RLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQR--L 799
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G+G
Sbjct: 800 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVG 857
Query: 236 YNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
+N+N+ + G GD +YL + +++P+A +F PD++++S+GFDA G P T
Sbjct: 858 FNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP------T 911
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGG 318
P G + K + K ++ L GG
Sbjct: 912 PLGGYNLSAKCFGYLT-KQLMGLAGG 936
Score = 39 (18.8 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 615 YTNTLIKGLVEGKQLSEEEAKAYIHEAS 642
Y +T+ LVE ++ EEA+ AS
Sbjct: 1004 YASTVGYSLVEAQKCENEEAETVTAMAS 1031
>RGD|1305874 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0014003 "oligodendrocyte development"
evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
Length = 588
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 113/303 (37%), Positives = 179/303 (59%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A + L+ G+ +RC L+ EA ++ L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEERCQCLSVCEASEEELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASK-LNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ ++ L++ ++ D SK +++Y + + A LAAG+ + + + V G +
Sbjct: 65 SPEYIALVQK--TQTLDKEELHTLSKQYDAVYFHPDTFHCARLAAGAALRLVDAVLTGAV 122
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
++ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 123 HNGVALVRPPGHHSQRAAANGFCVFNNVAIAAR---HAKQKYGLQRILIVDWDVHHGQGI 179
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F DP VL+FS HR+E G F+P + +G G G G+ +N+PW G+ADYL
Sbjct: 180 QYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQVGMGNADYL 239
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G+I
Sbjct: 240 AAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRICA 299
Query: 314 ALE 316
LE
Sbjct: 300 VLE 302
>UNIPROTKB|C9J8B8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328
HGNC:HGNC:18128 ChiTaRS:HDAC10 HOGENOM:HOG000225183 IPI:IPI00446419
SMR:C9J8B8 STRING:C9J8B8 Ensembl:ENST00000448072 Uniprot:C9J8B8
Length = 619
Score = 475 (172.3 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 94/254 (37%), Positives = 155/254 (61%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G +
Sbjct: 65 SPEYVSLVRETQVLGKEELQ-ALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQ 123
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH + A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG Q
Sbjct: 124 NGLALVRPPGHHGQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQGIQ 180
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 181 YLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVA 240
Query: 255 VWDHILLPVAKDFG 268
+ H+LLP+A + G
Sbjct: 241 AFLHLLLPLAFEGG 254
Score = 86 (35.3 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LA EGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 249 LAFEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQ 308
Query: 373 DELPTKLTSLKAPPAH 388
+ T + +P +H
Sbjct: 309 QQDVTAVPM--SPSSH 322
Score = 57 (25.1 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 259 ILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGG 318
++LP+A F PD+++++ G G L G P+ +++ L A G+++ LE
Sbjct: 512 LVLPLAYGFQPDLVLVALG----PGHGLQG----PHA-ALLAAMLRGLAGGRVLALLEEN 562
Query: 319 YNLGSISNSVLACMNVLLEDKPVAG-SSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+ ++ + +N E P G SS A P E + + +R +L W L
Sbjct: 563 -STPQLAGILARVLNG--EAPPSLGPSSVASP-EDV-QALMYLRGQLEPQWKML 611
>UNIPROTKB|H0YH91 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
Length = 384
Score = 385 (140.6 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 79/191 (41%), Positives = 122/191 (63%)
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G+N+NV W G
Sbjct: 139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWAGG 196
Query: 246 R---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSVML 300
GD +YLA + +++P+A++F PD++++SAGFDAA G P LGG V+ + M
Sbjct: 197 LDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMT 256
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY---PFESTWRVI 357
++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S E + P + R +
Sbjct: 257 QQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSL 316
Query: 358 QAVRKKLSAFW 368
+AV + S +W
Sbjct: 317 EAVIRVHSKYW 327
Score = 141 (54.7 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 17 LLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L SVH
Sbjct: 2 LIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVH 61
Query: 75 TENHVNL 81
+E HV L
Sbjct: 62 SERHVLL 68
Score = 54 (24.1 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGEL 133
SS AA AAGSV ++A +VA EL
Sbjct: 114 SSNAARWAAGSVTDLAFKVASREL 137
>UNIPROTKB|E2RS82 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
Length = 550
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 105/246 (42%), Positives = 154/246 (62%)
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G +++ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 2 GAVHNGLALVRPPGHHSQRAAANGFCVFNNVAIAAR---HAQQKHGLQRILIVDWDVHHG 58
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
Q +F DP VL+FS HR+E G F+P + +G+G G G+ +N+PW G+A
Sbjct: 59 QGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNA 118
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA + H+LLPVA +F P+++++SAGFD+A GDP G + TP + + + L A G+
Sbjct: 119 DYLAAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQVLAGGR 178
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK--PVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
+ LEGGY+L S+S SV + LL D P++G E P S IQ+VR + W
Sbjct: 179 VCAVLEGGYHLESLSQSVCMVVRALLGDPVPPLSGPME--PHRSALESIQSVRAAQAPHW 236
Query: 369 PTLADE 374
+L +
Sbjct: 237 TSLQQQ 242
>WB|WBGene00001838 [details] [associations]
symbol:hda-10 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
"histone deacetylase activity" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
Length = 517
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 116/335 (34%), Positives = 186/335 (55%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI--PQRCVVLNAKEAKDKN 69
+++V +++D + +H+ P YH E P R+ AI +L + R + +EA++
Sbjct: 4 EKKVFVIFDHQEQRHDQPWPSYHIEVPRRLDAILERLNTTKLLTDPRIEHIPRREAEESE 63
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+L+VHT+ +V+ +K+ + + +++ +K IY+N + A LAAG+ I++ V
Sbjct: 64 ILAVHTKRYVDDVKSTETMTVE-QQESFCTKYEDIYVNSATWHRAKLAAGASIDLMTSVM 122
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
+ A +RPPGHHA PDE GFC++NNVA+AA + G K+LIVD+DVH
Sbjct: 123 AAK-RPGIAFIRPPGHHAMPDEGCGFCIFNNVAIAAKAAIQN----G-QKVLIVDYDVHA 176
Query: 190 GNSTQKMFWK--DPRVLFFSVHRHEFGTFYP-ANDDGFYTMIGEGPGLGYNINVPWENGR 246
GN TQ+ + + V S+HR+E G F+P G Y IN+P
Sbjct: 177 GNGTQECVEQMGEGNVQLISIHRYENGHFWPNMPQTGIYHNYKN------TINLPLNTIG 230
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
DADY A++ HI+LP F PD++++S+GFDA+ GDP G +VTP G++ M++ L+D
Sbjct: 231 LTDADYHALFTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATMIRMLIDT 290
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLL-EDKP 340
+ LEGGY L +++ + LL E+ P
Sbjct: 291 GI-PVAALLEGGYFLDALAADSEWVLRALLGEEIP 324
>UNIPROTKB|I3L961 [details] [associations]
symbol:I3L961 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000024590
Uniprot:I3L961
Length = 606
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 97/266 (36%), Positives = 163/266 (61%)
Query: 52 GIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSS 111
G+ QRC+ L A+EA + L VH + +S+++ + ++ + +++Y + +
Sbjct: 2 GLEQRCLRLVAREASEAELGLVHRSGXRGT-QALSTEELQA----LSRQFDAVYFHPSTF 56
Query: 112 EAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNE 171
A LAAG+ +++ + V G + + A+VRPPGHH++ A GFC++N+VA+AA +
Sbjct: 57 HCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAK---HA 113
Query: 172 RPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEG 231
+ + G+++ILIVDWD+HHG TQ +F DP VL+FS HR+E G F+P + +G G
Sbjct: 114 QQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRG 173
Query: 232 PGLGYNINVPWENGRCGDADYL-AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCR 290
GLG+ +N+PW G+ADY+ A +LLP+A +F +++++SAGFD+A GD G +
Sbjct: 174 RGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQ 233
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALE 316
TP ++ + + L A G++ LE
Sbjct: 234 ATPECFAHLTQLLQVLAGGRVCAVLE 259
>UNIPROTKB|I3LKB5 [details] [associations]
symbol:I3LKB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000030674
Uniprot:I3LKB5
Length = 621
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 98/276 (35%), Positives = 167/276 (60%)
Query: 42 KAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL 101
+ +W+ L+ QRC+ L A+EA + L VH + +S+++ + ++ +
Sbjct: 11 RLLWDDLE-----QRCLRLVAREASEAELGLVHRSGXRGT-QALSTEELQA----LSRQF 60
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
+++Y + + A LAAG+ +++ + V G + + A+VRPPGHH++ A GFC++N+V
Sbjct: 61 DAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSV 120
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND 221
A+AA + + + G+++ILIVDWD+HHG TQ +F DP VL+FS HR+E G F+P
Sbjct: 121 AIAAK---HAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLR 177
Query: 222 DGFYTMIGEGPGLGYNINVPWENGRCGDADYL-AVWDHILLPVAKDFGPDIIIISAGFDA 280
+ +G G GLG+ +N+PW G+ADY+ A +LLP+A +F +++++SAGFD+
Sbjct: 178 ESDADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDS 237
Query: 281 AAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALE 316
A GD G + TP ++ + + L A G++ LE
Sbjct: 238 AIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAVLE 273
>UNIPROTKB|E7EUZ1 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
Length = 296
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 100/249 (40%), Positives = 148/249 (59%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH+
Sbjct: 32 GLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHS 91
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+++L++ R +A +S+YL+ S A LA+GSV+ + + V E+ +
Sbjct: 92 LEYIDLMETTQYMNEGELRV-LADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRN 150
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 151 GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQF 207
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 208 TFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAA 267
Query: 256 WDHILLPVA 264
+ H+LLPVA
Sbjct: 268 FLHVLLPVA 276
>UNIPROTKB|Q3Z9M2 [details] [associations]
symbol:DET0330 "Histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 112/329 (34%), Positives = 175/329 (53%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VGL+Y+ H T G H ENP+R+ AI + G+ R V + K L H
Sbjct: 3 VGLVYNHIYLNHET--GT-HVENPDRLLAIMEYINTHGLKDRLVHVEPKRVGLGELEGFH 59
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
T +++ ++ + D+ ++ S E A A G V+E ++V GEL
Sbjct: 60 TRKYISRVEEVGFSG-GGWLDQ------DTVISVDSYETALYAVGGVLEGVDKVLSGELE 112
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
SAF + RPPGHHA P+ +MGFC++NNVA+ A LN+ + ++ +VD+DVHHGN Q
Sbjct: 113 SAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHR---LKRVAVVDFDVHHGNGIQ 169
Query: 195 KMFWKDPRVLFFSVHR-HEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
+ DPRV + S H+ H F + +DG + I +N+P G CGD+ Y
Sbjct: 170 HVCLNDPRVTYISTHQIHHFPFTGDSCEDGPFQNI---------LNIPLPAG-CGDSHYQ 219
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM---LKKLMD-FAQG 309
V+D ++ P + P++I++ AG+DA D +G ++ G++ + LKK D G
Sbjct: 220 KVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRALKKTADEVCGG 279
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLED 338
K+V +LEGGY+ ++ SV A + VLL++
Sbjct: 280 KMVFSLEGGYHYLGLAESVGASLAVLLDE 308
>TIGR_CMR|DET_0330 [details] [associations]
symbol:DET_0330 "histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 112/329 (34%), Positives = 175/329 (53%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VGL+Y+ H T G H ENP+R+ AI + G+ R V + K L H
Sbjct: 3 VGLVYNHIYLNHET--GT-HVENPDRLLAIMEYINTHGLKDRLVHVEPKRVGLGELEGFH 59
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
T +++ ++ + D+ ++ S E A A G V+E ++V GEL
Sbjct: 60 TRKYISRVEEVGFSG-GGWLDQ------DTVISVDSYETALYAVGGVLEGVDKVLSGELE 112
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
SAF + RPPGHHA P+ +MGFC++NNVA+ A LN+ + ++ +VD+DVHHGN Q
Sbjct: 113 SAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHR---LKRVAVVDFDVHHGNGIQ 169
Query: 195 KMFWKDPRVLFFSVHR-HEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
+ DPRV + S H+ H F + +DG + I +N+P G CGD+ Y
Sbjct: 170 HVCLNDPRVTYISTHQIHHFPFTGDSCEDGPFQNI---------LNIPLPAG-CGDSHYQ 219
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM---LKKLMD-FAQG 309
V+D ++ P + P++I++ AG+DA D +G ++ G++ + LKK D G
Sbjct: 220 KVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRALKKTADEVCGG 279
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLED 338
K+V +LEGGY+ ++ SV A + VLL++
Sbjct: 280 KMVFSLEGGYHYLGLAESVGASLAVLLDE 308
>TIGR_CMR|SPO_3195 [details] [associations]
symbol:SPO_3195 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
Uniprot:Q5LNK8
Length = 364
Score = 444 (161.4 bits), Expect = 8.7e-42, P = 8.7e-42
Identities = 111/346 (32%), Positives = 181/346 (52%)
Query: 35 PENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRR 94
PE P + + N ++ G+ ++ A +++L VH ++++ + +S DS
Sbjct: 39 PEAPETKRRLKNLIEVTGLHSDLEMVTGGSATIEDVLRVHPRSYIDEFRRLS----DSGG 94
Query: 95 DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMG 154
+ L + + G+ E A L+AG VI+ E V +G +A+A+ RPPGHH PD G
Sbjct: 95 GELG--LRTPF-GPGAFEIAMLSAGLVIDAVEGVVQGRYRNAYALSRPPGHHCLPDWPNG 151
Query: 155 FCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFG 214
FCL N+A+A + LG K+ ++DWDVHHGN T+ ++++ VL S+H+
Sbjct: 152 FCLLANIAIAIE-AAKAKGLLG--KVAVLDWDVHHGNGTEAIYYERDDVLTISIHQDRC- 207
Query: 215 TFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIII 274
YP +D G G+G GLG+N+N+P G CG Y+ + +++P K F D++II
Sbjct: 208 --YP-HDTGSIDDQGKGAGLGFNMNIPLPPG-CGHNAYVEATERLIIPKLKAFDADLVII 263
Query: 275 SAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNV 334
+ GFDA DPL + + M +++M + GK+V A EGGY+ V C +
Sbjct: 264 ACGFDAGGFDPLARMMCSAETFREMTRRVMQVSDGKLVAAHEGGYS----ELYVPFCGHA 319
Query: 335 LLEDKPVAGSSEAYPFESTWRVI-QAVRKKLSAFWPTLADELPTKL 379
+LE+ + A P RV+ Q +++ AF L D++ KL
Sbjct: 320 MLEEMSGSTIHAADPLAQ--RVMGQQPGERVQAFHSELIDDMVAKL 363
>TAIR|locus:2119201 [details] [associations]
symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
"tubulin deacetylase activity" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019760 "glucosinolate metabolic process" evidence=RCA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
Length = 423
Score = 438 (159.2 bits), Expect = 4.4e-41, P = 4.4e-41
Identities = 119/350 (34%), Positives = 183/350 (52%)
Query: 34 HPENPNRIKAIWNKLQAAGI-P-----QRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS 87
HPE R+ AI N L+ + P Q + N K A +++ +VH + +V ++
Sbjct: 80 HPECSARVPAIVNALEMNELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKAMD 139
Query: 88 KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA-----FAIVRP 142
+ DS I Y + + + +AAG+ + + + V NS FA++RP
Sbjct: 140 EASDSGLIFIEGS-GPTYATSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIRP 198
Query: 143 PGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPR 202
PGHHA P MGFC++ NVA+AA +R G+ +I I+D+DVHHGN T F +DP
Sbjct: 199 PGHHAVPKGPMGFCVFGNVAIAARHA--QRTH-GLKRIFIIDFDVHHGNGTNDAFTEDPD 255
Query: 203 VLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLP 262
+ F S H+ G+ YP G + IG+G G G +N+P G GD V++ I++P
Sbjct: 256 IFFLSTHQD--GS-YPGT--GKISDIGKGKGEGTTLNLPLPGGS-GDIAMRTVFEEIIVP 309
Query: 263 VAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGG 318
A+ F PDII++SAG+DA DPL + T Y + K + A+ G+ V LEGG
Sbjct: 310 CAQRFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFFLEGG 369
Query: 319 YNLGSISNSVLACMNVLLEDKPVAGSSE--AYPFESTWRVIQ-AVRKKLS 365
YNL S+S+SV LL + +A + AY ++ R ++ A+++ S
Sbjct: 370 YNLESLSSSVADSFRALLGEDSLASEFDNPAYLYDEPMRKVRDAIQRAKS 419
>UNIPROTKB|Q5LQF5 [details] [associations]
symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 432 (157.1 bits), Expect = 2.2e-40, P = 2.2e-40
Identities = 111/321 (34%), Positives = 171/321 (53%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
H ENP + + N +QA G+ + L K A D+ + VH ++H++ + ++ +
Sbjct: 43 HFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCER---GG 99
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
D A +L S E A LA G VI + V G +A+ + RPPGHHA PD AM
Sbjct: 100 GD--AGELTPA--GPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALPDLAM 155
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL N A+ + + + G+ +I +VDWDVHHGN T+ +F DP VL S+H+
Sbjct: 156 GFCLLANAALG---IRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQDNL 212
Query: 214 GTFYPANDDGFYTMIG-EGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDII 272
+P + G IG +G G NINVP G G Y ++ I++P F P++I
Sbjct: 213 ---FPLDSGG----IGVKGAG-NSNINVPLPPGS-GSGAYREAFEQIVIPALDAFAPELI 263
Query: 273 IISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGSISNSV 328
++ G+DA+A DPLG C ++ + M +++M A QG+IV+ EGGY+ +
Sbjct: 264 VLPCGYDASAVDPLGVCMLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGYSPVYVPYCG 323
Query: 329 LACMNVLLEDKPVAGSSEAYP 349
LA +LE+ ++G+S+ P
Sbjct: 324 LA----VLEE--LSGASDTLP 338
>TIGR_CMR|SPO_2535 [details] [associations]
symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 432 (157.1 bits), Expect = 2.2e-40, P = 2.2e-40
Identities = 111/321 (34%), Positives = 171/321 (53%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
H ENP + + N +QA G+ + L K A D+ + VH ++H++ + ++ +
Sbjct: 43 HFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCER---GG 99
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
D A +L S E A LA G VI + V G +A+ + RPPGHHA PD AM
Sbjct: 100 GD--AGELTPA--GPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALPDLAM 155
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL N A+ + + + G+ +I +VDWDVHHGN T+ +F DP VL S+H+
Sbjct: 156 GFCLLANAALG---IRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQDNL 212
Query: 214 GTFYPANDDGFYTMIG-EGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDII 272
+P + G IG +G G NINVP G G Y ++ I++P F P++I
Sbjct: 213 ---FPLDSGG----IGVKGAG-NSNINVPLPPGS-GSGAYREAFEQIVIPALDAFAPELI 263
Query: 273 IISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGSISNSV 328
++ G+DA+A DPLG C ++ + M +++M A QG+IV+ EGGY+ +
Sbjct: 264 VLPCGYDASAVDPLGVCMLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGYSPVYVPYCG 323
Query: 329 LACMNVLLEDKPVAGSSEAYP 349
LA +LE+ ++G+S+ P
Sbjct: 324 LA----VLEE--LSGASDTLP 338
>UNIPROTKB|Q604Q2 [details] [associations]
symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
PATRIC:22608838 Uniprot:Q604Q2
Length = 310
Score = 426 (155.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 118/316 (37%), Positives = 162/316 (51%)
Query: 25 KHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKN 84
+H+T G HPE R+ AI + L A + L A A L VH+ H+ +
Sbjct: 13 RHDTGPG--HPEGSVRLAAIESALAAPEF-RSLRRLEAPRADISRLELVHSRRHIERV-- 67
Query: 85 ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG 144
+S A + ++ S EAA A G+V + V +AF VRPPG
Sbjct: 68 FASLPQTGHHFVDADTV----VSPESGEAALHAVGAVCLAVDEVIGKRARNAFCAVRPPG 123
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HHAEPD AMGFCL+NN+A+AA+ L G+ +I IVD+DVHHGN TQ F ++P+VL
Sbjct: 124 HHAEPDAAMGFCLFNNIAIAAAHALANH---GLQRIAIVDFDVHHGNGTQAAFRRNPQVL 180
Query: 205 FFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVA 264
+ S H++ + YP T E G+G +N+P G A Y LP
Sbjct: 181 YVSTHQYPW---YPG------TGSAEETGVGNLVNIPLPAGT-DSAAYREAVTATALPAI 230
Query: 265 KDFGPDIIIISAGFDAAAGDPLGGCRVTP--YGY-SVMLKKLMD-FAQGKIVLALEGGYN 320
F P++++ISAGFDA DPL +T YG+ + L KL D + G+IV ALEGGY
Sbjct: 231 DRFRPELVLISAGFDAHRDDPLADLALTEDDYGWITAELMKLADRHSGGRIVSALEGGYA 290
Query: 321 LGSISNSVLACMNVLL 336
L ++ S A + LL
Sbjct: 291 LEALGRSAAAHLRTLL 306
>TAIR|locus:2201826 [details] [associations]
symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
Uniprot:Q94EJ2
Length = 377
Score = 417 (151.9 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 112/385 (29%), Positives = 194/385 (50%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDY--------------HPENPNRIKAIWNKLQAAGIPQR 56
+ RV + + E M +H+ +G + HPEN +R++ + + L+ I
Sbjct: 2 VTNRVDVFWHEGMLRHDAVEGVFDTGYDPGFLDVLEKHPENADRVRNMLSILRRGPIAPH 61
Query: 57 CVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYL 116
A LL HT ++ K + + + R IA+ +++ GS EAA L
Sbjct: 62 VNWFTGLPAIVSELLMFHTSEYIE--KLVEADK-SGERCEIAA---GTFMSPGSWEAALL 115
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
AAG+ + + + + A+A+VRPPGHH++P +A G+C NN A+A LN
Sbjct: 116 AAGTTLSAMQHILDCHGKIAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSG---S 172
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVH-RH-EFGTFYPANDDGFYTMIGEGPGL 234
+++ ++D DVH+GN T + F+ +VL S+H H +G+ +P G +GE GL
Sbjct: 173 CSRVAVIDIDVHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQK--GSIDELGEDVGL 230
Query: 235 GYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPY 294
GYN+NVP NG GD Y + +++P + FGPD++++ G D++A DP G +T
Sbjct: 231 GYNLNVPLPNGT-GDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMN 289
Query: 295 GY----SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLE-DKPVAGSSEAY- 348
GY +M + + G++++ EGGY++ + + A + +L+ +P AY
Sbjct: 290 GYRRIGQIMRGVAEEHSHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEPHLSDPIAYY 349
Query: 349 PFESTWRV--IQAVRKKLSAFWPTL 371
P E V +++++ + F P L
Sbjct: 350 PEEEANAVAAVESIKTYHTEFVPFL 374
>UNIPROTKB|Q4KBB7 [details] [associations]
symbol:PFL_3361 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
OMA:PGSYEIA ProtClustDB:CLSK868223
BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
Length = 377
Score = 415 (151.1 bits), Expect = 1.9e-38, P = 1.9e-38
Identities = 102/306 (33%), Positives = 161/306 (52%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
H E+P + + + + +G+ ++ + +A A + +LL VH+ ++ K +S D+
Sbjct: 43 HAESPETKRRLKSLMDVSGLTRQLHLRSAAAATEDDLLRVHSAAYLQRFKALS----DAG 98
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
+ + + GS E A L+AG + + V GE ++A+++ RPPGHH D+AM
Sbjct: 99 GGHLGDEAP---VGPGSYEIAQLSAGLAMAAVDAVLSGEADNAYSLSRPPGHHCTRDQAM 155
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFC N+A+A + G+ K+ ++DWDVHHGN TQ +F + VL S+H+
Sbjct: 156 GFCFLANIAIAIEAA---KARHGLGKVAVIDWDVHHGNGTQSIFEERADVLTLSLHQD-- 210
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
G F P G G G GLG NIN+P G DA YL HI++P + F P++II
Sbjct: 211 GCFPPGY--GGEQDRGRGAGLGCNINIPLLPGSGHDA-YLYAMQHIVIPALERFEPELII 267
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSISNSVL 329
++ G+DA A DPL + + M + L D A+ G++VL EGGY+ + L
Sbjct: 268 VACGYDANAVDPLARMLLHSDSFREMTQCLKDAAERLCRGRLVLVHEGGYSEAYVPFCGL 327
Query: 330 ACMNVL 335
A + L
Sbjct: 328 ATLEAL 333
>TIGR_CMR|SPO_0250 [details] [associations]
symbol:SPO_0250 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
Uniprot:Q5LX39
Length = 308
Score = 410 (149.4 bits), Expect = 7.1e-38, P = 7.1e-38
Identities = 105/319 (32%), Positives = 171/319 (53%)
Query: 26 HNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNI 85
H TP G HPE R++ + + L+ + + + A A + +LL +H +V I+
Sbjct: 14 HVTPTG--HPERVARLEHVLHALEPLDLRR----VTAPLAAEDDLLRIHPAGYVADIR-- 65
Query: 86 SSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG 144
D+R D ++++ +L+ GS +AA+ AAG+V+ + V GE +AF +RPPG
Sbjct: 66 -----DARPDEGFAQIDGDTFLSPGSVDAAFRAAGAVVRAVDMVLGGEAQNAFCAIRPPG 120
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HHAE + AMGFCL+ N A+AA L+ G+ ++ +VD+DVHHGN TQ + W + R L
Sbjct: 121 HHAERETAMGFCLFGNAALAAKHALDHH---GLRRVAVVDFDVHHGNGTQDLLWDEARAL 177
Query: 205 FFSVHRHEF--GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLP 262
+ + G+ P ++DG + I +N+P G G A+ A + P
Sbjct: 178 LITSQQMPLWPGSGRP-DEDGAHGQI---------VNIPLAPGT-GGAEMRAAYMAQAFP 226
Query: 263 VAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKL----MDFAQGKIVLALEGG 318
+ F P++IIISAGFDA DPL + ++ + +L + QG+IV LEGG
Sbjct: 227 RLRAFKPELIIISAGFDAHQDDPLANLNWSTADFAWLTAELCALAQELCQGRIVSTLEGG 286
Query: 319 YNLGSISNSVLACMNVLLE 337
Y+L +++ + A + L++
Sbjct: 287 YDLNALAAATRAHVQELIK 305
>UNIPROTKB|E1BQQ2 [details] [associations]
symbol:Gga.27678 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
Length = 218
Score = 404 (147.3 bits), Expect = 3.4e-37, P = 3.4e-37
Identities = 81/217 (37%), Positives = 130/217 (59%)
Query: 17 LLYDERMCKH----NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+YDE M H N P D E P R+ A + +LQ + +RCV + A+E ++ +L
Sbjct: 7 LIYDEAMTSHKLLWNDPICDI--EVPERLSASYEQLQCYHLVERCVPVPAREGSEEEILL 64
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ H+ K+ + + + RI+ +S + + + A LA G+ +++ + V G+
Sbjct: 65 VHSSEHLEAAKSTQTMNEEELK-RISGNYDSFFFHPNTYHCARLAVGAALQLVDSVMSGK 123
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ + A GFCL+NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 124 VCNGMALVRPPGHHSQRNAANGFCLFNNVAIAAEYA---KLKYGLQRILIVDWDVHHGQG 180
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
TQ +F +DP VL+FS HR+E F+P+ + Y +G
Sbjct: 181 TQYIFEEDPSVLYFSWHRYEHQEFWPSLKESDYDAVG 217
>UNIPROTKB|Q484X2 [details] [associations]
symbol:CPS_1655 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 390 (142.3 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 107/335 (31%), Positives = 177/335 (52%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV- 73
VG++ R +HN G++HPEN R+ AI ++L +G+ ++K DK+LL++
Sbjct: 3 VGIIGHYRCGEHNM--GEHHPENGKRLTAISDQLIRSGLDYVVRQFDSKPI-DKSLLALA 59
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT+ H++ + + + + + + +S+ +NE + + +AG+ ++ + V EG L
Sbjct: 60 HTQEHIDFVFDNAPNEGE---ENFTVGEDSV-MNEKTLTSIMYSAGAAVDAVDLVMEGTL 115
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+AF RPPGHHAE D+ MGFC +NNVAVAA++ + + G+ ++ IVD+DVHHGN T
Sbjct: 116 GAAFCATRPPGHHAEHDKGMGFCFFNNVAVAAAYA---KQKYGLKRVAIVDFDVHHGNGT 172
Query: 194 QKMFWK--------DPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
+ + D LF S +++ YP F + P + IN P
Sbjct: 173 EDIITNHFNATPEDDKGYLFCSSYQYPL---YP-----FEIQESDTPPI---INTPLAAT 221
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM- 304
G+ + H LP F P++I+ISAGFDA D + +T Y + +L
Sbjct: 222 TKGEQFREKLTAH-WLPALHKFKPELILISAGFDAHIEDEMSHVSLTEADYRWITDELKI 280
Query: 305 ---DFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
++ +G+IV LEGGY ++ SV+A +N L+
Sbjct: 281 IAEEYGKGRIVSVLEGGYAPSALGRSVVAHVNGLI 315
>TIGR_CMR|CPS_1655 [details] [associations]
symbol:CPS_1655 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 390 (142.3 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 107/335 (31%), Positives = 177/335 (52%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV- 73
VG++ R +HN G++HPEN R+ AI ++L +G+ ++K DK+LL++
Sbjct: 3 VGIIGHYRCGEHNM--GEHHPENGKRLTAISDQLIRSGLDYVVRQFDSKPI-DKSLLALA 59
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT+ H++ + + + + + + +S+ +NE + + +AG+ ++ + V EG L
Sbjct: 60 HTQEHIDFVFDNAPNEGE---ENFTVGEDSV-MNEKTLTSIMYSAGAAVDAVDLVMEGTL 115
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+AF RPPGHHAE D+ MGFC +NNVAVAA++ + + G+ ++ IVD+DVHHGN T
Sbjct: 116 GAAFCATRPPGHHAEHDKGMGFCFFNNVAVAAAYA---KQKYGLKRVAIVDFDVHHGNGT 172
Query: 194 QKMFWK--------DPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
+ + D LF S +++ YP F + P + IN P
Sbjct: 173 EDIITNHFNATPEDDKGYLFCSSYQYPL---YP-----FEIQESDTPPI---INTPLAAT 221
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM- 304
G+ + H LP F P++I+ISAGFDA D + +T Y + +L
Sbjct: 222 TKGEQFREKLTAH-WLPALHKFKPELILISAGFDAHIEDEMSHVSLTEADYRWITDELKI 280
Query: 305 ---DFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
++ +G+IV LEGGY ++ SV+A +N L+
Sbjct: 281 IAEEYGKGRIVSVLEGGYAPSALGRSVVAHVNGLI 315
>TIGR_CMR|SPO_A0096 [details] [associations]
symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
Length = 344
Score = 381 (139.2 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 96/292 (32%), Positives = 153/292 (52%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
H E+P + + + +G+ + V +A+ + ++ VH+E +++ K +S D+
Sbjct: 15 HAESPESKRRFKSLMDVSGLTAQLSVQSAEPVTETDMARVHSEAYLDRFKTLS----DAG 70
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
A + + GS E A L+AG V V +G ++A+A+ RPPGHHA D +M
Sbjct: 71 GGN-AGEFSPF--GSGSYEIAALSAGLVKRAVFDVVDGTFDNAYALSRPPGHHAMRDGSM 127
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL N+A+A R E G+ ++ ++DWDVHHGN TQ +F++ VL S+H+
Sbjct: 128 GFCLLANIAIAIEAA---RAERGLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIHQEN- 183
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
F P + G + G G G G N+NV G G Y+ D ++LP F P++II
Sbjct: 184 -CFPPGSGSG--SERGAGAGEGANLNVNLLPG-AGHQSYIDAMDILVLPALHAFRPELII 239
Query: 274 ISAGFDAAAGDPLGGCRVTPYG--YSVMLKKLM----DFAQGKIVLALEGGY 319
++ G DA DPL R+T + + + + +M D G++V A EGGY
Sbjct: 240 VACGLDANNFDPLS--RMTAHSGTFGYLTRAVMGAANDLCGGRLVCAHEGGY 289
>UNIPROTKB|F1MWS5 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
Length = 895
Score = 403 (146.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 80/154 (51%), Positives = 104/154 (67%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA +A G VIE+A RVA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L
Sbjct: 747 SSGAARMAVGCVIELASRVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL- 805
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
R +L I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G
Sbjct: 806 --RDQLNISKILIVDLDVHHGNGTQQAFYADPNILYISLHRYDEGNFFPGS--GAPNEVG 861
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHIL 260
G G GYNIN+ W G GD +YL + +L
Sbjct: 862 TGLGEGYNINIAWTGGLDPPMGDIEYLEAFRLVL 895
Score = 270 (100.1 bits), Expect = 8.0e-20, P = 8.0e-20
Identities = 76/250 (30%), Positives = 117/250 (46%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + + V
Sbjct: 634 GIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLV 693
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H+E+H L + ++ D R + + S L S E + G
Sbjct: 694 HSEHHSLLYGTNPLDGQKLDPRT-LLGDSSQKFF---SSLPCGGLGVDSDTIWNELHSSG 749
Query: 132 ELNSAFA-IVRPPGHHAEPDEAMGFCL------YNNVAVAASF-LLNE--------RPEL 175
A ++ A + GF + + + A F N R +L
Sbjct: 750 AARMAVGCVIELASRVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQL 809
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPNILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 867
Query: 236 YNINVPWENG 245
YNIN+ W G
Sbjct: 868 YNINIAWTGG 877
>TIGR_CMR|CHY_0263 [details] [associations]
symbol:CHY_0263 "histone deacetylase domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
Uniprot:Q3AFE9
Length = 433
Score = 373 (136.4 bits), Expect = 9.2e-34, P = 9.2e-34
Identities = 99/260 (38%), Positives = 140/260 (53%)
Query: 111 SEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEA--MGFCLYNNVAVAASFL 168
++A +AAGS IE+AER+ GE+ + FA+VRPPGHHA GFC NNVA+ +L
Sbjct: 73 TDAHLIAAGSCIELAERILAGEVKNGFALVRPPGHHATRTVYGNRGFCNINNVAITVDYL 132
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
R G+ KI I+D DVHHG+ TQ +F+ DP VLF S+H+ + T YP GF
Sbjct: 133 ---RWVKGVKKIAIIDTDVHHGDGTQDIFYHDPDVLFISLHQ-DGRTLYPGT--GFIDEA 186
Query: 229 GEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGG 288
G G IN+P G GD + L + + +LP+ ++F P+ II SAG D DPL
Sbjct: 187 GTPNAYGTTINLPLPPGS-GDEEILYLLEEAVLPILEEFQPEFIINSAGQDNHYSDPLAR 245
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNL-GSISNSVLACMNVLL-EDKPVAGSSE 346
VT GY ++ + + + + LEGGY++ G++ LA + L E +
Sbjct: 246 MAVTARGYG----RITELIKPDLAV-LEGGYSIEGALPYVNLAILLALYGESYEKVVEPK 300
Query: 347 AYPFESTWRVIQAVRKKLSA 366
P E R + KKL+A
Sbjct: 301 GLPLEYRARH-KDYAKKLAA 319
>UNIPROTKB|F1SEI2 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
Length = 122
Score = 335 (123.0 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 64/124 (51%), Positives = 84/124 (67%)
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
L + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L I+KILIVD DVHHGN
Sbjct: 1 LQNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQLNISKILIVDLDVHHGNG 57
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR---CGD 249
TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G GYNIN+ W G GD
Sbjct: 58 TQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGGLDPPMGD 115
Query: 250 ADYL 253
+YL
Sbjct: 116 IEYL 119
>TIGR_CMR|SPO_2002 [details] [associations]
symbol:SPO_2002 "acetylpolyamine aminohydrolase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
Length = 341
Score = 331 (121.6 bits), Expect = 3.7e-29, P = 3.7e-29
Identities = 86/221 (38%), Positives = 119/221 (53%)
Query: 108 EGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASF 167
EG+ EAAY +A S I A+ + +GE SA+ + RPPGHHA D A GFC NN A+AA
Sbjct: 121 EGTWEAAYWSAQSAITGADLIIQGE-RSAYVLSRPPGHHAFGDLAGGFCFLNNSAIAA-- 177
Query: 168 LLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTM 227
ER + I+D DVHHGN TQ +F++ VL S+H FYP G
Sbjct: 178 ---ERLRAAGLRPAILDIDVHHGNGTQGIFYERDDVLTVSIHADP-ARFYPFFW-GHAQE 232
Query: 228 IGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLG 287
G G GLGYN+N+P G GD DYL L VA FG +++++ G DA+ DP
Sbjct: 233 RGAGRGLGYNLNLPLARGT-GDDDYLDTLSVALRQVAS-FGSRVLVVALGLDASIDDPFQ 290
Query: 288 GCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSV 328
G +T G++ + L + ++ EGGY S+ +++
Sbjct: 291 GLAITQDGFARIGAALAG-TRVPVLFVQEGGYLCDSLGDTL 330
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 330 (121.2 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 101/411 (24%), Positives = 197/411 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
KRRV YD + N G HP P+RI+ + + G+ ++ + AK A + +
Sbjct: 18 KRRVAYFYDADV--GNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMC 75
Query: 72 SVHTENHVNLIKNISSKQFDS-RRDRIASKL-NSIYLNEGSSEAAYLAAGSVIEVAERVA 129
HT+ +++ + ++ + +R+ + + + + +G E ++ G +E A R+
Sbjct: 76 QFHTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLN 135
Query: 130 EGELNSAFAIVRPPG--HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
G+ + A V G HHA+ EA GFC N++ + LL P ++L +D DV
Sbjct: 136 RGKCDVA---VNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHP-----RVLYIDIDV 187
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G F+P G IG G G Y +NVP +G
Sbjct: 188 HHGDGVEEAFYTTDRVMTCSFHK--YGEFFPGT--GELRDIGVGAGKNYAVNVPLRDG-I 242
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
DA Y +V++ ++ + + + P +++ G D+ +GD LG ++ G++ + + F
Sbjct: 243 DDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFG 302
Query: 308 QGKIVLALEGGYNLGSISNS---VLACMNVLLEDKPVAGSSEAYPFEST-WRVIQAVRKK 363
+V+ GGY + +++ + +N ++ DK + +E Y + +++
Sbjct: 303 IPMMVVG-GGGYTMRNVARTWCFETGLLNNVVLDKDLP-YNEYYEYYGPDYKLSVRPSNM 360
Query: 364 LSAFWPTLADELPTK----LTSLKAPPAHMISSS--DSED-EDTKVETLEA 407
+ P D++ T L + K P+ ++ + D+ED D + ++ EA
Sbjct: 361 FNVNTPEYLDKVMTNIFANLENTKYAPSVQLNHTPRDAEDLGDVEEDSAEA 411
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 329 (120.9 bits), Expect = 6.1e-29, P = 6.1e-29
Identities = 94/320 (29%), Positives = 154/320 (48%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQ--RCVVLNAKEAKDKNLL 71
R L+Y + + GD HP R + ++A G+ + +L+ A ++ LL
Sbjct: 4 RTALIYSNDFARFSY--GDDHPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALL 61
Query: 72 SVHTENHVNLIKNISSKQFDSRRD-R--IASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
+ H ++++ ++ S D+R D R + N ++ G + A L AG IE A V
Sbjct: 62 TFHAPDYLDRLREFSESD-DARADFRYGLGDLDNPVF--RGLYDWARLGAGGTIEAARLV 118
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
AE + AF + HHA +A GF N+ VA + LL E G+ ++ +D D H
Sbjct: 119 AEEGYDIAFNLAGG-WHHAHRAKASGFSYLNDAVVAINLLL----EKGL-RVAYLDIDAH 172
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGT-FYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HG+ Q+ F+ RVL S+H E G F+P GF G G G GY++N+P
Sbjct: 173 HGDGVQEAFYDTDRVLTISIH--ESGMYFFPGT--GFEGETGTGAGTGYSVNIPLV-AHA 227
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
DA ++ +D + P+ + PD+++ G D DPL VT + Y+ +L+KL
Sbjct: 228 DDALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALG 287
Query: 308 QGKIVLALEGGYNLGSISNS 327
+ + GGYNL +++ +
Sbjct: 288 IPWVAVG-GGGYNLVNVARA 306
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 329 (120.9 bits), Expect = 6.1e-29, P = 6.1e-29
Identities = 94/320 (29%), Positives = 154/320 (48%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQ--RCVVLNAKEAKDKNLL 71
R L+Y + + GD HP R + ++A G+ + +L+ A ++ LL
Sbjct: 4 RTALIYSNDFARFSY--GDDHPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALL 61
Query: 72 SVHTENHVNLIKNISSKQFDSRRD-R--IASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
+ H ++++ ++ S D+R D R + N ++ G + A L AG IE A V
Sbjct: 62 TFHAPDYLDRLREFSESD-DARADFRYGLGDLDNPVF--RGLYDWARLGAGGTIEAARLV 118
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
AE + AF + HHA +A GF N+ VA + LL E G+ ++ +D D H
Sbjct: 119 AEEGYDIAFNLAGG-WHHAHRAKASGFSYLNDAVVAINLLL----EKGL-RVAYLDIDAH 172
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGT-FYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HG+ Q+ F+ RVL S+H E G F+P GF G G G GY++N+P
Sbjct: 173 HGDGVQEAFYDTDRVLTISIH--ESGMYFFPGT--GFEGETGTGAGTGYSVNIPLV-AHA 227
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
DA ++ +D + P+ + PD+++ G D DPL VT + Y+ +L+KL
Sbjct: 228 DDALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALG 287
Query: 308 QGKIVLALEGGYNLGSISNS 327
+ + GGYNL +++ +
Sbjct: 288 IPWVAVG-GGGYNLVNVARA 306
>UNIPROTKB|E7EPS2 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00465375
ProteinModelPortal:E7EPS2 SMR:E7EPS2 Ensembl:ENST00000426196
ArrayExpress:E7EPS2 Bgee:E7EPS2 Uniprot:E7EPS2
Length = 269
Score = 328 (120.5 bits), Expect = 7.8e-29, P = 7.8e-29
Identities = 70/187 (37%), Positives = 109/187 (58%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH+
Sbjct: 87 GLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHS 146
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+++L++ R +A +S+YL+ S A LA+GSV+ + + V E+ +
Sbjct: 147 LEYIDLMETTQYMNEGELRV-LADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRN 205
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 206 GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQF 262
Query: 196 MFWKDPR 202
F +DPR
Sbjct: 263 TFDQDPR 269
>UNIPROTKB|Q4K950 [details] [associations]
symbol:aphA_2 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WSAQSAV HOGENOM:HOG000225182
RefSeq:YP_261233.1 ProteinModelPortal:Q4K950 STRING:Q4K950
GeneID:3476184 KEGG:pfl:PFL_4136 PATRIC:19877677
ProtClustDB:CLSK920945 BioCyc:PFLU220664:GIX8-4171-MONOMER
Uniprot:Q4K950
Length = 341
Score = 328 (120.5 bits), Expect = 7.8e-29, P = 7.8e-29
Identities = 77/225 (34%), Positives = 126/225 (56%)
Query: 106 LNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA 165
+ E + AAY +A S + A+ + +GE +A+A+ RPPGHHA + A GFC NN A+AA
Sbjct: 118 VGESTWRAAYWSAQSAVAGAQALLDGE-PAAYALCRPPGHHARSEAAGGFCYLNNAAIAA 176
Query: 166 SFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFY 225
L ++ ++ ++D D+HHG Q++F++ VL+ SVH FYP GF
Sbjct: 177 QVLRDKYA-----RVAVLDTDMHHGQGIQEIFYERADVLYVSVHGDPTN-FYPGVA-GFA 229
Query: 226 TMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP 285
G G G GYN+N+P +G + D+LA + L V K F +++++S GFD DP
Sbjct: 230 EERGAGAGEGYNLNLPMAHG-ASEGDFLARLEQALEAV-KAFDAEVLVLSLGFDIYELDP 287
Query: 286 LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLA 330
VT G++++ +++ +++ EGGY+L S+ ++ A
Sbjct: 288 QSKVAVTRDGFAILGQRIRSLGLPCLIVQ-EGGYHLESLEDNARA 331
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 335 (123.0 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 90/317 (28%), Positives = 152/317 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K RV YD N G HP P+R++ + + G+ ++ V+ A +
Sbjct: 7 KSRVSYYYDGDF--GNFYYGQGHPMKPHRVRMTHSLIVNYGLYRKLNVMRPARASFSEIT 64
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
H+++++N ++N+ S + D++A S + +G E L+ G + A R+
Sbjct: 65 RYHSDDYINFLRNVKSDNMSTFTDQMARFSVGEDCPVFDGMYEFCQLSCGGSLAAAARLN 124
Query: 130 EGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
E S AI G HHA+ EA GFC N++ +A LL ++L +D DVH
Sbjct: 125 RQE--SEIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKHH-----KRVLYIDIDVH 177
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HG+ ++ F+ RV+ S H+H G ++P D +G G G Y +NVP +G
Sbjct: 178 HGDGVEEAFYTTDRVMTVSFHKH--GEYFPGTGD--LKDVGAGSGKYYALNVPLRDG-VD 232
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
D Y ++ I+ V F P+ +++ G D+ AGD LG +T YG+ ++ + F
Sbjct: 233 DVTYERIFRTIMGEVMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGKCVEYMKSF-N 291
Query: 309 GKIVLALEGGYNLGSIS 325
++L GGY + ++S
Sbjct: 292 VPLLLVGGGGYTIRNVS 308
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 325 (119.5 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 86/301 (28%), Positives = 146/301 (48%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + +++ K A + + S HT+ ++ ++ +S + D + +
Sbjct: 35 PKRASMVHSLIEAYSLLDHMMIIKPKVASMEEMASFHTDAYLQHLQKVSEEGDDDHPESV 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G+ I A+ + +G+ AI P G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAVGGATITAAQCLLDGKCK--VAINWPGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C Y N AV L ++ ++IL +D D+HHG+ + F +V+ S+H+ G
Sbjct: 153 C-YLNDAVLGILRLRQK----FDRILYIDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG- 206
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIIS 275
F+P D T IG G G Y++NVP ++G D Y + + +L V F P+ +++
Sbjct: 207 FFPGTGD--VTDIGLGKGRYYSVNVPIQDG-IQDEKYYQICETVLKEVYAAFNPEAVVLQ 263
Query: 276 AGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
G D AGDP+ +TP G LK ++ + ++L GGYNL + + V+
Sbjct: 264 LGADTIAGDPMCSFNMTPEGVGKCLKYVLQWQLATLILG-GGGYNLANTARCWTYLTGVI 322
Query: 336 L 336
L
Sbjct: 323 L 323
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 315 (115.9 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 86/318 (27%), Positives = 155/318 (48%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K++V YDE + ++ G HP P+R++ + N + + ++ V+ A ++
Sbjct: 5 KKKVSYFYDEDVGNYHY--GPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMT 62
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
HT+ ++ + ++ + + K N + +G E ++AG I A+ +
Sbjct: 63 RCHTDEYIEFLWRVTPDTMEKFQPH-QLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQEL 121
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
G N+ AI G HHA+ EA GFC N++A+AA LL ++L +D DV
Sbjct: 122 NSG--NAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYH-----QRVLYIDIDV 174
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ FG ++P G G G G Y +NVP +G
Sbjct: 175 HHGDGVEEFFYTTDRVMTCSFHK--FGEYFPGT--GHIKDTGIGTGKNYAVNVPLRDG-I 229
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y +V+ ++ + + F P+ +I+ G D+ AGD LG ++ G+S+ + + F
Sbjct: 230 DDESYESVFKPVISHIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFN 289
Query: 308 QGKIVLALEGGYNLGSIS 325
I + GGY + +++
Sbjct: 290 LPMICVG-GGGYTVRNVA 306
>UNIPROTKB|Q3AFN8 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 314 (115.6 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 98/312 (31%), Positives = 146/312 (46%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
L+Y + + + HP NP R ++ A + + ++ + A K L VH
Sbjct: 7 LIYSDDYLSYRLAED--HPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELYLVHDP 64
Query: 77 NHVNLIKNISS--KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+V + N+S + + R + S+ N ++ G EAA L AG AE + EGE +
Sbjct: 65 AYVEAVMNLSKNPENVNGSRFGLGSEDNPVF--SGMHEAAALVAGGSALGAELIYEGEAD 122
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVA-ASFLLNERPELGINKILIVDWDVHHGNST 193
F I HHA D A GFC+YN++AVA A F E G+ K+ VD D HHG+
Sbjct: 123 HVFNIAGGL-HHALRDAASGFCIYNDLAVAIAKFR-----EKGL-KVAYVDLDAHHGDGV 175
Query: 194 QKMFWKDPRVLFFSVHRHEFGTF-YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F+ DP VL S+H E G + +P G T +GEG G IN+P E D +
Sbjct: 176 QWLFYSDPGVLTISIH--ETGRYLFPGT--GSITELGEGAAYGTKINIPLEP-YTEDDSW 230
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ---- 308
L + I+ + + F PDI++ G D+ DPL T + K L + A
Sbjct: 231 LWALEEIVPELIRKFKPDILVTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAHEVCG 290
Query: 309 GKIVLALEGGYN 320
G+ + GGY+
Sbjct: 291 GRWLAGGGGGYD 302
>TIGR_CMR|CHY_0174 [details] [associations]
symbol:CHY_0174 "acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 314 (115.6 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 98/312 (31%), Positives = 146/312 (46%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
L+Y + + + HP NP R ++ A + + ++ + A K L VH
Sbjct: 7 LIYSDDYLSYRLAED--HPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELYLVHDP 64
Query: 77 NHVNLIKNISS--KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+V + N+S + + R + S+ N ++ G EAA L AG AE + EGE +
Sbjct: 65 AYVEAVMNLSKNPENVNGSRFGLGSEDNPVF--SGMHEAAALVAGGSALGAELIYEGEAD 122
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVA-ASFLLNERPELGINKILIVDWDVHHGNST 193
F I HHA D A GFC+YN++AVA A F E G+ K+ VD D HHG+
Sbjct: 123 HVFNIAGGL-HHALRDAASGFCIYNDLAVAIAKFR-----EKGL-KVAYVDLDAHHGDGV 175
Query: 194 QKMFWKDPRVLFFSVHRHEFGTF-YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F+ DP VL S+H E G + +P G T +GEG G IN+P E D +
Sbjct: 176 QWLFYSDPGVLTISIH--ETGRYLFPGT--GSITELGEGAAYGTKINIPLEP-YTEDDSW 230
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ---- 308
L + I+ + + F PDI++ G D+ DPL T + K L + A
Sbjct: 231 LWALEEIVPELIRKFKPDILVTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAHEVCG 290
Query: 309 GKIVLALEGGYN 320
G+ + GGY+
Sbjct: 291 GRWLAGGGGGYD 302
>UNIPROTKB|Q4K3I0 [details] [associations]
symbol:aphA_3 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_263203.1
ProteinModelPortal:Q4K3I0 STRING:Q4K3I0 GeneID:3480515
KEGG:pfl:PFL_6145 PATRIC:19881827 HOGENOM:HOG000225182 OMA:GAWARWT
ProtClustDB:CLSK865777 BioCyc:PFLU220664:GIX8-6188-MONOMER
Uniprot:Q4K3I0
Length = 343
Score = 310 (114.2 bits), Expect = 7.0e-27, P = 7.0e-27
Identities = 83/228 (36%), Positives = 117/228 (51%)
Query: 106 LNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA 165
+ G+ +AAY AA + + G +SAFA+ RPPGHHA D G+C NN A+AA
Sbjct: 120 ITAGTWQAAYSAAQVALTAQAHIQNGA-HSAFALCRPPGHHAAGDLMGGYCYLNNAAIAA 178
Query: 166 SFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH---EFGTFYPANDD 222
L++ G K+ I+D D HHGN TQ +F++ VLF S+H H EF F
Sbjct: 179 QAFLDQ----GHRKVAILDVDYHHGNGTQSIFYERSDVLFTSIHGHPEAEFPFFL----- 229
Query: 223 GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAA 282
G+ GEG G G+N N P G DA + A + + + + DII++S G D
Sbjct: 230 GYADECGEGAGEGFNFNYPLAAGSGWDA-WSAALEQACNEIQR-YDADIIVVSLGVDTFK 287
Query: 283 GDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL-ALEGGYNLGSIS-NSV 328
DP+ ++ Y M K++ A GK L +EGGY + I N+V
Sbjct: 288 DDPISQFKLDSPDYLAMGKRIA--ALGKPTLFVMEGGYAVEEIGINAV 333
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 309 (113.8 bits), Expect = 9.1e-27, P = 9.1e-27
Identities = 86/301 (28%), Positives = 144/301 (47%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + + HT+ ++ ++ +S + D D I
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSI 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G+ I A+ + +G AI G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C Y N AV L + E +IL VD D+HHG+ + F +V+ S+H+ G
Sbjct: 153 C-YLNDAVLGILRLRRKFE----RILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG- 206
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIIS 275
F+P D + +G G G Y++NVP ++G D Y + + +L V + F P +++
Sbjct: 207 FFPGTGD--VSDVGLGKGRYYSVNVPIQDG-IQDEKYYQICESVLKEVYQAFNPKAVVLQ 263
Query: 276 AGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
G D AGDP+ +TP G LK ++ + ++L GGYNL + + V+
Sbjct: 264 LGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGGYNLANTARCWTYLTGVI 322
Query: 336 L 336
L
Sbjct: 323 L 323
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 307 (113.1 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 85/302 (28%), Positives = 144/302 (47%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + + HT+ ++ ++ +S + D D +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSV 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G+ I A+ + +G AI G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C Y N AV L + ++IL VD D+HHG+ + F +V+ S+H+ G
Sbjct: 153 C-YLNDAVLGILRLRRK----FDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG- 206
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIIS 275
F+P D + +G G G Y++NVP ++G D Y + + +L V F P +++
Sbjct: 207 FFPGTGD--VSDVGLGKGRYYSVNVPIQDG-IQDEKYYHICESVLKEVYIAFNPKAVVLQ 263
Query: 276 AGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALE-GGYNLGSISNSVLACMNV 334
G D AGDP+ +TP G LK ++ + ++L E GGYNL + + V
Sbjct: 264 LGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTARCWTYLTGV 323
Query: 335 LL 336
+L
Sbjct: 324 IL 325
>DICTYBASE|DDB_G0279267 [details] [associations]
symbol:hdaD "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032129 "histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] dictyBase:DDB_G0279267 Pfam:PF00850 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0006351
EMBL:AAFI02000030 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 RefSeq:XP_641762.1
ProteinModelPortal:Q54X15 EnsemblProtists:DDB0237655 GeneID:8621960
KEGG:ddi:DDB_G0279267 OMA:ELILISC Uniprot:Q54X15
Length = 1489
Score = 217 (81.4 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 46/125 (36%), Positives = 71/125 (56%)
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD------EAMGFCLY 158
++++ S AA +AG+ + + V +G + SAF RPPGHHA D + GFCL
Sbjct: 1191 FVSKLSLHAAKRSAGATCQAIDNVMKGNVTSAFVAARPPGHHAGRDGLTSGTSSQGFCLL 1250
Query: 159 NNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYP 218
N+V + A + + + ++KI I+D+DVHHGN T+++ D F S+H E G FYP
Sbjct: 1251 NHVCIGAKYA---QLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEG-FYP 1306
Query: 219 ANDDG 223
+ G
Sbjct: 1307 GSGGG 1311
Score = 126 (49.4 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 31/108 (28%), Positives = 59/108 (54%)
Query: 235 GYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPY 294
G +N+P + + + +L + I++ D+ P++I+IS GFDA D L +
Sbjct: 1383 GNIVNIPLDP-KSSASSFLKAFS-IIIDKLNDYQPELILISCGFDAHMEDHLASLCLLEE 1440
Query: 295 GYSVM---LKKLMD-FAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
Y + L+++ D + +G++V LEGGYN+ ++ +A ++ L ED
Sbjct: 1441 NYVEITRSLRRVADRWCKGRLVSILEGGYNINALRQCTIAHLSALSED 1488
Score = 95 (38.5 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQA-AGIPQRCVVLN-AKEAKDKN 69
+R+V LY H PD HPE+P R+ ++ + + R ++ N +E DK
Sbjct: 1058 ERKVMALYHTTCLDHLVPDD--HPESPKRLSSVIKAINDFSRQSDRLIIKNDPEEINDKW 1115
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGS 120
+L+VH+ ++ L+++++ K D+ R + N S +N+ S+ G+
Sbjct: 1116 ILTVHSPEYLRLLEDLTEK-LDANEIRPLNVNNDGASTGINQFSTSTPITTTGT 1168
Score = 44 (20.5 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 203 VLFFSVHRHEFGTF-YPANDDGFYT----MIGEG--PGLG 235
++ F VH H GT +ND GFY M EG PG G
Sbjct: 1271 IIDFDVH-HGNGTEEILSNDQGFYFLSIHMFEEGFYPGSG 1309
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 305 (112.4 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 86/301 (28%), Positives = 142/301 (47%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + S HT+ ++ ++ +S D D I
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSI 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G+ I A+ + +G AI G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C Y N AV L + ++IL VD D+HHG+ + F +V+ S+H+ G
Sbjct: 153 C-YLNDAVLGILRLRRK----FDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG- 206
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIIS 275
F+P D + +G G G Y++NVP ++G D Y + + +L V F P +++
Sbjct: 207 FFPGTGD--VSDVGLGKGRYYSVNVPIQDG-IQDERYYHICESVLKEVYIAFNPKAVVLQ 263
Query: 276 AGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
G D AGDP+ +TP G LK ++ + ++L GGYNL + + V+
Sbjct: 264 LGADTIAGDPMCSFNMTPVGIGKCLKYILQWELATLILG-GGGYNLANTARCWTYLTGVI 322
Query: 336 L 336
L
Sbjct: 323 L 323
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 305 (112.4 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 84/301 (27%), Positives = 144/301 (47%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + + HT+ ++ ++ +S + + D I
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G I A+ + +G+ AI G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCK--VAINWSGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C Y N AV L + ++IL VD D+HHG+ + F +V+ S+H+ G
Sbjct: 153 C-YLNDAVLGILRLRRK----FDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG- 206
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIIS 275
F+P D + +G G G Y++NVP ++G D Y + + +L V + F P +++
Sbjct: 207 FFPGTGD--MSDVGLGKGRYYSVNVPIQDG-IQDEKYYHICESVLKEVYQAFNPKAVVLQ 263
Query: 276 AGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
G D AGDP+ +TP G LK ++ + ++L GGYNL + + V+
Sbjct: 264 LGADTIAGDPMCSFNMTPVGIGKCLKYVLQWQLATLILG-GGGYNLANTARCWTYLTGVI 322
Query: 336 L 336
L
Sbjct: 323 L 323
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 305 (112.4 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 84/301 (27%), Positives = 144/301 (47%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + + HT+ ++ ++ +S + + D I
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G I A+ + +G+ AI G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCK--VAINWSGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C Y N AV L + ++IL VD D+HHG+ + F +V+ S+H+ G
Sbjct: 153 C-YLNDAVLGILRLRRK----FDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG- 206
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIIS 275
F+P D + +G G G Y++NVP ++G D Y + + +L V + F P +++
Sbjct: 207 FFPGTGD--MSDVGLGKGRYYSVNVPIQDG-IQDEKYYHICESVLKEVYQAFNPKAVVLQ 263
Query: 276 AGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
G D AGDP+ +TP G LK ++ + ++L GGYNL + + V+
Sbjct: 264 LGADTIAGDPMCSFNMTPVGIGKCLKYVLQWQLATLILG-GGGYNLANTARCWTYLTGVI 322
Query: 336 L 336
L
Sbjct: 323 L 323
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 304 (112.1 bits), Expect = 6.3e-26, P = 6.3e-26
Identities = 84/301 (27%), Positives = 143/301 (47%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + + HT+ ++ ++ +S + D D +
Sbjct: 73 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSV 132
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G+ I A+ + +G AI G HHA+ DEA GF
Sbjct: 133 EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGF 190
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C Y N AV L + ++IL VD D+HHG+ + F +V+ S+H+ G
Sbjct: 191 C-YLNDAVLGILRLRRK----FDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG- 244
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIIS 275
F+P D + +G G G Y++NVP ++G D Y + + +L V F P +++
Sbjct: 245 FFPGTGD--VSDVGLGKGRYYSVNVPIQDG-IQDEKYYHICESVLKEVYIAFNPKAVVLQ 301
Query: 276 AGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
G D AGDP+ +TP G LK ++ + ++L GGYNL + + V+
Sbjct: 302 LGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGGYNLANTARCWTYLTGVI 360
Query: 336 L 336
L
Sbjct: 361 L 361
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 321 (118.1 bits), Expect = 6.3e-26, P = 6.3e-26
Identities = 103/410 (25%), Positives = 193/410 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K+R+ YD + N G HP P+RI+ + + G+ ++ + AK A + +
Sbjct: 17 KKRIAYFYDADI--GNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMC 74
Query: 72 SVHTENHVNLIKNISSKQFDS-RRDRIASKL-NSIYLNEGSSEAAYLAAGSVIEVAERVA 129
HT+ +++ I ++ D +++I + + + +G E ++ G +E A R+
Sbjct: 75 QFHTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLN 134
Query: 130 EGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
G+ + AI G HHA+ EA GFC N++ + LL P ++L +D DVH
Sbjct: 135 RGKCD--IAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHP-----RVLYIDIDVH 187
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HG+ ++ F+ RV+ S H+ +G F+P G IG G G +++NVP +G
Sbjct: 188 HGDGVEEAFYTTDRVMTCSFHK--YGEFFPGT--GELRDIGVGKGKYHSVNVPLRDG-ID 242
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DA Y +V++ ++ + + + P I++ G D+ +GD LG ++ G++ + + F
Sbjct: 243 DATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNI 302
Query: 309 GKIVLALEGGYNLGSISNSVL----ACMNVLLEDK-PVAGSSEAY-P-FESTWRVIQAVR 361
+V+ GGY + +++ + NV L D+ P E Y P ++ R
Sbjct: 303 PMMVVG-GGGYTMRNVARTWAYESGLLNNVKLPDELPYNEYYEYYGPDYKLDVRSSNMFN 361
Query: 362 KKLSAFWPTLADELPTKLTSLKAPPAHMISS--SDSED-EDTKVETLEAV 408
+ F + + L + K P+ ++ +D ED D + +T A+
Sbjct: 362 QNSPEFLDKILTNIIANLENTKHAPSVQMNEVPNDPEDLGDVEEDTAMAI 411
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 321 (118.1 bits), Expect = 6.3e-26, P = 6.3e-26
Identities = 103/410 (25%), Positives = 193/410 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K+R+ YD + N G HP P+RI+ + + G+ ++ + AK A + +
Sbjct: 17 KKRIAYFYDADI--GNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMC 74
Query: 72 SVHTENHVNLIKNISSKQFDS-RRDRIASKL-NSIYLNEGSSEAAYLAAGSVIEVAERVA 129
HT+ +++ I ++ D +++I + + + +G E ++ G +E A R+
Sbjct: 75 QFHTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLN 134
Query: 130 EGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
G+ + AI G HHA+ EA GFC N++ + LL P ++L +D DVH
Sbjct: 135 RGKCD--IAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHP-----RVLYIDIDVH 187
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HG+ ++ F+ RV+ S H+ +G F+P G IG G G +++NVP +G
Sbjct: 188 HGDGVEEAFYTTDRVMTCSFHK--YGEFFPGT--GELRDIGVGKGKYHSVNVPLRDG-ID 242
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DA Y +V++ ++ + + + P I++ G D+ +GD LG ++ G++ + + F
Sbjct: 243 DATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNI 302
Query: 309 GKIVLALEGGYNLGSISNSVL----ACMNVLLEDK-PVAGSSEAY-P-FESTWRVIQAVR 361
+V+ GGY + +++ + NV L D+ P E Y P ++ R
Sbjct: 303 PMMVVG-GGGYTMRNVARTWAYESGLLNNVKLPDELPYNEYYEYYGPDYKLDVRSSNMFN 361
Query: 362 KKLSAFWPTLADELPTKLTSLKAPPAHMISS--SDSED-EDTKVETLEAV 408
+ F + + L + K P+ ++ +D ED D + +T A+
Sbjct: 362 QNSPEFLDKILTNIIANLENTKHAPSVQMNEVPNDPEDLGDVEEDTAMAI 411
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 311 (114.5 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 85/323 (26%), Positives = 161/323 (49%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
R K+RV DE++ ++ GD HP P+RI + + G+ + V + + A
Sbjct: 22 RPQKKRVTYHLDEQVGNYHY--GDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFG 79
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVA 125
+ H E++++ +K ++ + D+ + N + +G+ E + +AG+ ++ +
Sbjct: 80 EMSEFHREDYLDFLKRVTPDNAEQFADKF-QQFNIGDDCPVFDGTYEFSQRSAGASLDAS 138
Query: 126 ERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVD 184
++ +G+ + AI G HHA+ EA GFC N++ +A +L P ++L +D
Sbjct: 139 RKLVQGQTD--IAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFP-----RVLYID 191
Query: 185 WDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN 244
D+HHG+ Q+ F++ RVL S H++ G F+PA G + G G + +NVP E+
Sbjct: 192 IDIHHGDGVQQAFYESDRVLTVSFHKYN-GDFFPAT--GNFDENGVKGGKYFALNVPLED 248
Query: 245 GRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM 304
G GD Y +++ I+ P F P I++ G D+ D LG ++ + + ++
Sbjct: 249 G-IGDEQYTSLFKSIIEPTINTFQPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTR 307
Query: 305 DFAQGKIVLALEGGYNLGSISNS 327
F +V+ GGY L +++ +
Sbjct: 308 SFNIPMLVVG-GGGYTLRNVARA 329
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 315 (115.9 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 98/398 (24%), Positives = 186/398 (46%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
KRRV YD+ + + G H P+RI+ + + + ++ + A+ A + L
Sbjct: 16 KRRVAYFYDQDVGNYFYGTG--HCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELT 73
Query: 72 SVHTENHVNLIKNISSKQFDS-RRDRIASKL-NSIYLNEGSSEAAYLAAGSVIEVAERVA 129
HT+ +++ I ++ R+++ + + + +G E ++ G +E A R+
Sbjct: 74 QFHTDEYIDFIDRVTPDNLHLFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLN 133
Query: 130 EGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
G+ + AI G HHA+ EA GFC N++ + LL P ++L +D DVH
Sbjct: 134 RGQAD--IAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHP-----RVLYIDTDVH 186
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HG+ ++ F+ + RV+ S H+ FG F+P G T IG G G + IN+P +G
Sbjct: 187 HGDGVEEAFYTNDRVMTCSFHK--FGEFFPGT--GNLTDIGIGKGKYHAINIPLRDG-ID 241
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DA Y ++++ I+ + + + P I++ G D+ +GD LG ++ G++ + +
Sbjct: 242 DASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGV 301
Query: 309 GKIVLALEGGYNLGSISNSVL----ACMNVLL-EDKPVAGSSEAY-P-FESTWRVIQAVR 361
+VL GGY + +++ + C +L ++ P G E Y P +E R
Sbjct: 302 PVMVLG-GGGYTIRNVARTWAFETGVCNGEILPKELPYNGYYEYYAPTYELDVRSANMTN 360
Query: 362 KKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDED 399
+ + ++ + L + K P+ ++ + ED
Sbjct: 361 ANSKEYLDKILTQVISNLDNTKHTPSVQMNEVPLDMED 398
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 315 (115.9 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 98/398 (24%), Positives = 186/398 (46%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
KRRV YD+ + + G H P+RI+ + + + ++ + A+ A + L
Sbjct: 16 KRRVAYFYDQDVGNYFYGTG--HCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELT 73
Query: 72 SVHTENHVNLIKNISSKQFDS-RRDRIASKL-NSIYLNEGSSEAAYLAAGSVIEVAERVA 129
HT+ +++ I ++ R+++ + + + +G E ++ G +E A R+
Sbjct: 74 QFHTDEYIDFIDRVTPDNLHLFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLN 133
Query: 130 EGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
G+ + AI G HHA+ EA GFC N++ + LL P ++L +D DVH
Sbjct: 134 RGQAD--IAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHP-----RVLYIDTDVH 186
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HG+ ++ F+ + RV+ S H+ FG F+P G T IG G G + IN+P +G
Sbjct: 187 HGDGVEEAFYTNDRVMTCSFHK--FGEFFPGT--GNLTDIGIGKGKYHAINIPLRDG-ID 241
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DA Y ++++ I+ + + + P I++ G D+ +GD LG ++ G++ + +
Sbjct: 242 DASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGV 301
Query: 309 GKIVLALEGGYNLGSISNSVL----ACMNVLL-EDKPVAGSSEAY-P-FESTWRVIQAVR 361
+VL GGY + +++ + C +L ++ P G E Y P +E R
Sbjct: 302 PVMVLG-GGGYTIRNVARTWAFETGVCNGEILPKELPYNGYYEYYAPTYELDVRSANMTN 360
Query: 362 KKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDED 399
+ + ++ + L + K P+ ++ + ED
Sbjct: 361 ANSKEYLDKILTQVISNLDNTKHTPSVQMNEVPLDMED 398
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 298 (110.0 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 86/302 (28%), Positives = 142/302 (47%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + S HT+ ++ ++ +S D D I
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSI 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G+ I A+ + +G AI G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C Y N AV L + ++IL VD D+HHG+ + F +V+ S+H+ G
Sbjct: 153 C-YLNDAVLGILRLRRK----FDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG- 206
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENGRC-GDADYLAVWDHILLPVAKDFGPDIIII 274
F+P D + +G G G Y++NVP ++ C D Y + + +L V F P +++
Sbjct: 207 FFPGTGD--VSDVGLGKGRYYSVNVPIQD--CIQDERYYHICESVLKEVYIAFNPKAVVL 262
Query: 275 SAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNV 334
G D AGDP+ +TP G LK ++ + ++L GGYNL + + V
Sbjct: 263 QLGADTIAGDPMCSFNMTPVGIGKCLKYILQWELATLILG-GGGYNLANTARCWTYLTGV 321
Query: 335 LL 336
+L
Sbjct: 322 IL 323
>DICTYBASE|DDB_G0280195 [details] [associations]
symbol:hdaC "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 dictyBase:DDB_G0280195 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:XP_641298.1
ProteinModelPortal:Q54VQ7 PRIDE:Q54VQ7 EnsemblProtists:DDB0237658
GeneID:8622431 KEGG:ddi:DDB_G0280195 OMA:NSEFETH Uniprot:Q54VQ7
Length = 1704
Score = 326 (119.8 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 89/270 (32%), Positives = 134/270 (49%)
Query: 86 SSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGH 145
S K F+ D I +++ S +AA A+GSV + V+ AF +RPPGH
Sbjct: 1157 SHKDFEGDDDNIYDT----FVSHRSIKAALRASGSVCAAVDSVSRSGYTRAFCAIRPPGH 1212
Query: 146 HA----EPDEA--MGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWK 199
HA +A G+CL NNVA+ A + G ++I +VD+DVHHGN TQ++
Sbjct: 1213 HAGRYGRTSDAPSQGYCLINNVAIGAKYA---SLTAGYSRIAVVDFDVHHGNGTQEILSG 1269
Query: 200 DPRVLFFSVHR-HEFGTFYPAN--DDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
D LF S+H E FYP D G + G G +N+ + G A +L W
Sbjct: 1270 DDNFLFISIHVCDEKRYFYPGTGQDVGDIDEVS-GQFDGNILNIGLKRNT-GSAVFLQQW 1327
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKL----MDFAQGKIV 312
+ ++P + + P +I +SAGFD DP G ++ Y V+ K + + +G+I+
Sbjct: 1328 MNKIIPRLEAYKPQLIFLSAGFDGHKDDPTNGLKLNEEDYFVITKMIKTVAFKYCKGRII 1387
Query: 313 LALEGGYNLGSISNSVLACMN----VLLED 338
LEGGY + +NS+ C+N L+ED
Sbjct: 1388 SVLEGGYGIEK-TNSLQRCVNSHLKALIED 1416
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 302 (111.4 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 92/336 (27%), Positives = 162/336 (48%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+KR+V YD + + G HP P+RI+ L G+ Q VL A+D++L
Sbjct: 15 VKRKVCYFYDPEVGNYYYGQG--HPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDL 72
Query: 71 LSVHTENHVNLIKNISSK-QFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEVAERV 128
H +++V+ +++I+ + Q D R + + +G AG + + ++
Sbjct: 73 CRFHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKL 132
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
G + AI G HHA+ EA GFC N++ +A LL + ++L VD D+
Sbjct: 133 NHGLCD--IAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-----ERVLYVDIDI 185
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ FG ++P G IG G G Y++NVP ++G
Sbjct: 186 HHGDGVEEAFYATDRVMTVSFHK--FGDYFPGT--GHIQDIGYGSGKYYSLNVPLDDG-I 240
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y ++ I+ V + F P +++ G D+ +GD LG ++ G++ +K + F
Sbjct: 241 DDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300
Query: 308 QGKIVLALEGGYNLGSISN----SVLACMNVLLEDK 339
++L GGY + +++ + V +EDK
Sbjct: 301 VPLLLLG-GGGYTIRNVARCWCYETGVALGVEVEDK 335
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 301 (111.0 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 105/415 (25%), Positives = 185/415 (44%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
R+V YD + H G HP P+R++ + + GI ++ + ++A + L +
Sbjct: 4 RKVSYFYDNEVGNHYY--GPNHPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELTN 61
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERVA 129
H+++++N +K ++ ++ K N + +G +++G I A +V
Sbjct: 62 FHSDDYINFLKLVTPDNMHDYSKQLV-KFNVREDCPVFDGMYNFCQISSGGSIGCAVKVN 120
Query: 130 EGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
E S AI G HHA+ EA GFC N++ ++ LL ++L +D D+H
Sbjct: 121 SKE--SDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHH-----ERVLYIDIDIH 173
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HG+ ++ F+ RV+ S H+ +G ++P D IG G Y++N P ++G
Sbjct: 174 HGDGVEEAFYTTDRVMTVSFHK--YGDYFPGTGD--VKDIGADKGKYYSLNFPLKDG-ID 228
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
D Y +++ I+ V + P ++I G D+ GD LG +T G++ ++ L F
Sbjct: 229 DESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKSFNV 288
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVL----LEDK-PVAGSSEAYPFESTWRVI--QAVR 361
+VL GGY + +++ ++L L+D+ P E Y E +
Sbjct: 289 PLVVLG-GGGYTIKNVARCWTYETSILVDSELKDELPYNDYLEYYGPEYRLHITPNNMEN 347
Query: 362 KKLSAFWPTLADELPTKLTSLKAPPA---HMIS------SSDSEDEDTKVETLEA 407
+ + L +L L +L PA H I S D +DED V EA
Sbjct: 348 QNTKDYLEKLKIQLLENLRNLNHAPAAAHHDIPPDSFNYSDDEDDEDPDVRISEA 402
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 296 (109.3 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 82/318 (25%), Positives = 151/318 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
KR+V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 8 KRKVCYYYDGDVGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H+++++ +++I S + + N + +G E L+AG VA V
Sbjct: 66 KYHSDDYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGG--SVASAV 122
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ + A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 123 KLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 177
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 178 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG-I 232
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y A++ ++ V + F P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 233 DDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFN 292
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 293 LPMLMLG-GGGYTIRNVA 309
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 291 (107.5 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 88/327 (26%), Positives = 158/327 (48%)
Query: 1 MEVKSGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL 60
ME + T K RV +D+ + N G YHP P+R+ N + G+ ++ +
Sbjct: 1 MEYNTILNNTSKTRVCYFFDQDV--GNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLY 58
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAG 119
A+ A +++L H+E++V+ ++ ++ + + +D + + G + + +G
Sbjct: 59 KARPADAEDMLKFHSEDYVDFLERVTPENINEWKDVKRFHIGEDCPVFPGLYDYCSIYSG 118
Query: 120 SVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN 178
IE A ++ + AI G HHA DEA GFC N++ +A LL
Sbjct: 119 GSIEGALKLNHRMYD--IAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHA----- 171
Query: 179 KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNI 238
++L +D DVHHG+ Q+ F+ RV+ S H+ G F+P D IG G Y++
Sbjct: 172 RVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKFG-GDFFPGTGD--IDEIGAKTGKLYSV 228
Query: 239 NVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSV 298
NVP +G D +YL ++ ++ V + P +I++ G D+ D LG +T G++
Sbjct: 229 NVPLADG-IDDKNYLNIFKPVIQGVMDYYRPSVIVLQCGADSLRFDRLGCFNLTIKGHAE 287
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSIS 325
++ + F +VL GGY + +++
Sbjct: 288 CVRFVKSFNIPTLVLG-GGGYTVRNVA 313
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 296 (109.3 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 84/340 (24%), Positives = 161/340 (47%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+RV YD + + G HP P+RI+ + + + ++ + AK A +
Sbjct: 26 KRVAYFYDSDVGNYAYVSG--HPMKPHRIRMTHSLVMNYSLYKKMEIYRAKPASKFEMTQ 83
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERVA 129
HT+ +++ + ++ D+ SK N + +G E ++AG +E A R+
Sbjct: 84 FHTDEYIDFLSKVTPDNMDAFAKE-QSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLN 142
Query: 130 EGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
+ + A+ G HHA+ EA GFC N++ + LL + ++L VD DVH
Sbjct: 143 RNKCD--IAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFK-----QRVLYVDIDVH 195
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HG+ ++ F+ RV+ S H+ +G ++P G IG G G Y +N P +G
Sbjct: 196 HGDGVEEAFYTTDRVMTVSFHK--YGEYFPGT--GELRDIGVGQGKYYAVNFPLRDG-ID 250
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
D Y ++++ ++ V + + P+ +++ G D+ +GD LG ++ G++ +K + F
Sbjct: 251 DVSYKSIFEPVIKSVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNL 310
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY 348
+++ GGY + +++ + +L+ D GS Y
Sbjct: 311 PTLIVG-GGGYTMRNVARTWAFETGILVGDN--LGSELPY 347
Score = 47 (21.6 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 393 SDSEDEDTK----VETLEAVLQ---VALSKLKVDDGHAELGMATP 430
SDSEDED V A L+ A +L + D E GMATP
Sbjct: 447 SDSEDEDENAANGVTRKPAHLKRRNQANYRLDLADSGVESGMATP 491
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 292 (107.8 bits), Expect = 5.9e-23, P = 5.9e-23
Identities = 76/299 (25%), Positives = 143/299 (47%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
G HP P+RI+ N L G+ ++ + +A + + H+++++ +++I
Sbjct: 30 GQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNM 89
Query: 91 DSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HH 146
S + + N + +G E L+AG + A V + + A+ G HH
Sbjct: 90 -SEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVGPASAVKLNKQQTDIAVNWAGGLHH 148
Query: 147 AEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFF 206
A+ EA GFC N++ +A LL ++L +D D+HHG+ ++ F+ RV+
Sbjct: 149 AKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDIHHGDGVEEAFYTTDRVMTV 203
Query: 207 SVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKD 266
S H+ +G ++P D IG G G Y +N P +G D Y A++ ++ V +
Sbjct: 204 SFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG-IDDESYEAIFKPVMSKVMEM 258
Query: 267 FGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSIS 325
F P +++ G D+ +GD LG +T G++ ++ + F ++L GGY + +++
Sbjct: 259 FQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVA 316
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 296 (109.3 bits), Expect = 6.1e-23, Sum P(2) = 6.1e-23
Identities = 96/366 (26%), Positives = 171/366 (46%)
Query: 2 EVKSGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAA-GIPQRCVVL 60
E+ +G +K+R Y + H G HP P R+ + N L + +P+ V+
Sbjct: 17 EIIEPDGADVKKRNVAYYYHKDVGH-FHYGQLHPMKPQRL-VVCNDLVVSYEMPKYMTVV 74
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLA 117
+ + ++ HTE++VN ++ ++ K + D + + N + G + L
Sbjct: 75 ESPKLDAADISVFHTEDYVNFLQTVTPKLGLTMPDDVLRQFNIGEDCPIFAGLWDYCTLY 134
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPG--HHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AG +E A R+ ++N ++ PG HHA+ EA GFC N++ + LL
Sbjct: 135 AGGSVEGARRLNH-KMNDI--VINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYH--- 188
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
++L +D D+HHG+ Q+ F RV+ S HR FG ++P + G G GPG
Sbjct: 189 --KRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHR--FGQYFPGS--GSIMDKGVGPGKY 242
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+ INVP D YL +++ ++ V ++F P+ I++ G D+ D LG ++
Sbjct: 243 FAINVPLM-AAIRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNA 301
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLE---DKPVAGSSEAYPFES 352
++ +K + + +VL GGY L +++ V+L D + G+S Y
Sbjct: 302 HARAVKYVKSLGKPLMVLG-GGGYTLRNVARCWALETGVILGLRMDDEIPGTS-LYSHYF 359
Query: 353 TWRVIQ 358
T R+++
Sbjct: 360 TPRLLR 365
Score = 38 (18.4 bits), Expect = 6.1e-23, Sum P(2) = 6.1e-23
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 459 EGGQV-EGMQKPCSGSKDRNPP 479
E G+V E M++ C +D PP
Sbjct: 434 EVGKVSEKMEEECFVEEDSKPP 455
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 290 (107.1 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 81/318 (25%), Positives = 150/318 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
KR+V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 8 KRKVCYYYDGDVGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H+++++ +++I S + + N + +G E L+ G VA V
Sbjct: 66 KYHSDDYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVASAV 122
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ + A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 123 KLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 177
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 178 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG-I 232
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y A++ ++ V + F P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 233 DDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFN 292
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 293 LPMLMLG-GGGYTIRNVA 309
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 290 (107.1 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 81/318 (25%), Positives = 150/318 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
KR+V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 8 KRKVCYYYDGDVGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H+++++ +++I S + + N + +G E L+ G VA V
Sbjct: 66 KYHSDDYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVASAV 122
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ + A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 123 KLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 177
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 178 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG-I 232
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y A++ ++ V + F P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 233 DDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFN 292
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 293 LPMLMLG-GGGYTIRNVA 309
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 290 (107.1 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 81/318 (25%), Positives = 150/318 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
KR+V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 8 KRKVCYYYDGDVGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H+++++ +++I S + + N + +G E L+ G VA V
Sbjct: 66 KYHSDDYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVASAV 122
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ + A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 123 KLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 177
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 178 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG-I 232
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y A++ ++ V + F P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 233 DDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFN 292
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 293 LPMLMLG-GGGYTIRNVA 309
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 287 (106.1 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 80/318 (25%), Positives = 150/318 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 8 RRKVCYYYDGDVGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H+++++ +++I S + + N + +G E L+ G VA V
Sbjct: 66 KYHSDDYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVASAV 122
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ + A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 123 KLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 177
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 178 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG-I 232
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y A++ ++ V + F P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 233 DDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFN 292
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 293 LPMLMLG-GGGYTIRNVA 309
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 285 (105.4 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 81/318 (25%), Positives = 150/318 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K++V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 9 KKKVCYYYDGDVGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 66
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H+++++ +++I S + + N + +G E L+ G VA V
Sbjct: 67 KYHSDDYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAV 123
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ + AI G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 124 KLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 178
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 179 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG-I 233
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y A++ I+ V + + P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 234 DDESYEAIFKPIMSKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFN 293
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 294 LPLLMLG-GGGYTIKNVA 310
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 275 (101.9 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 82/302 (27%), Positives = 142/302 (47%)
Query: 28 TPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS 87
+PD HP N R+ ++ LQ G +++ + A D+ + +HTE ++N +K
Sbjct: 17 SPD---HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGE 73
Query: 88 KQFD---SRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG 144
+ + + + ++ ++ N EA+ L G + + V G++ A + G
Sbjct: 74 GKLEKSIAMTYGLGTEDTPMFPN--MHEASALLVGGTLTAVDAVLSGKVKHALNL--GGG 129
Query: 145 -HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRV 203
HH +A GFC+YN+ ++A ++ + + G+ ++L +D D HHG+ Q F+ DP V
Sbjct: 130 LHHGFRGKASGFCIYNDSSIAMKYI---QKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNV 185
Query: 204 LFFSVHRHEFGTF-YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLP 262
S+H E G + +P G G+G G Y+ NVP + D +L + ++
Sbjct: 186 CTISLH--ETGRYLFPGT--GAVNERGQGNGYSYSFNVPLD-AFTEDESFLDSYRTVVKE 240
Query: 263 VAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGG 318
VA F PDII+ G DA DPL T Y + K + A +G+ + GG
Sbjct: 241 VAAYFKPDIILTQNGADAHYYDPLTHLCATMNIYREIPKLAREIANEYCEGRWIAVGGGG 300
Query: 319 YN 320
Y+
Sbjct: 301 YD 302
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 275 (101.9 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 82/302 (27%), Positives = 142/302 (47%)
Query: 28 TPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS 87
+PD HP N R+ ++ LQ G +++ + A D+ + +HTE ++N +K
Sbjct: 17 SPD---HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGE 73
Query: 88 KQFD---SRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG 144
+ + + + ++ ++ N EA+ L G + + V G++ A + G
Sbjct: 74 GKLEKSIAMTYGLGTEDTPMFPN--MHEASALLVGGTLTAVDAVLSGKVKHALNL--GGG 129
Query: 145 -HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRV 203
HH +A GFC+YN+ ++A ++ + + G+ ++L +D D HHG+ Q F+ DP V
Sbjct: 130 LHHGFRGKASGFCIYNDSSIAMKYI---QKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNV 185
Query: 204 LFFSVHRHEFGTF-YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLP 262
S+H E G + +P G G+G G Y+ NVP + D +L + ++
Sbjct: 186 CTISLH--ETGRYLFPGT--GAVNERGQGNGYSYSFNVPLD-AFTEDESFLDSYRTVVKE 240
Query: 263 VAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGG 318
VA F PDII+ G DA DPL T Y + K + A +G+ + GG
Sbjct: 241 VAAYFKPDIILTQNGADAHYYDPLTHLCATMNIYREIPKLAREIANEYCEGRWIAVGGGG 300
Query: 319 YN 320
Y+
Sbjct: 301 YD 302
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 283 (104.7 bits), Expect = 8.1e-22, P = 8.1e-22
Identities = 84/318 (26%), Positives = 148/318 (46%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K+RV YD + + G HP P+RI+ N L G+ ++ + +A +
Sbjct: 6 KKRVCYYYDSDIGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMT 63
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H++ +V +++I S ++ + N + +G E L+AG VA V
Sbjct: 64 KFHSDEYVRFLRSIRPDNM-SEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGG--SVAAAV 120
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ S I G HHA+ EA GFC N++ + LL ++L +D DV
Sbjct: 121 KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYH-----QRVLYIDIDV 175
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N+P +G
Sbjct: 176 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNIPLRDGMD 231
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
DA Y +++ I+ V + F P +++ G D+ GD LG +T G+ ++ + +
Sbjct: 232 DDA-YESIFVPIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYN 290
Query: 308 QGKIVLALEGGYNLGSIS 325
+++ GGY + ++S
Sbjct: 291 LPFLMVG-GGGYTIRNVS 307
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 280 (103.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 80/319 (25%), Positives = 150/319 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 8 RRKVCYYYDGDVGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H+++++ +++I S + + N + +G E L+ G VA V
Sbjct: 66 KYHSDDYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVASAV 122
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ + A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 123 KLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 177
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 178 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG-I 232
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT-PYGYSVMLKKLMDF 306
D Y A++ ++ V + F P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 233 DDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSF 292
Query: 307 AQGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 293 NLPMLMLG-GGGYTIRNVA 310
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 280 (103.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 80/319 (25%), Positives = 150/319 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 8 RRKVCYYYDGDVGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H+++++ +++I S + + N + +G E L+ G VA V
Sbjct: 66 KYHSDDYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVASAV 122
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ + A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 123 KLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 177
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 178 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG-I 232
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT-PYGYSVMLKKLMDF 306
D Y A++ ++ V + F P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 233 DDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSF 292
Query: 307 AQGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 293 NLPMLMLG-GGGYTIRNVA 310
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 280 (103.6 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 80/319 (25%), Positives = 150/319 (47%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 8 RRKVCYYYDGDVGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H+++++ +++I S + + N + +G E L+ G VA V
Sbjct: 66 KYHSDDYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVASAV 122
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ + A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 123 KLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 177
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 178 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG-I 232
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT-PYGYSVMLKKLMDF 306
D Y A++ ++ V + F P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 233 DDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSF 292
Query: 307 AQGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 293 NLPMLMLG-GGGYTIRNVA 310
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 275 (101.9 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 79/318 (24%), Positives = 147/318 (46%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K++V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 9 KKKVCYYYDGDIGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H++ ++ +++I S + + N + +G E L+ G VA V
Sbjct: 67 KYHSDEYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAV 123
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 124 KLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 178
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 179 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNFPMRDG-I 233
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y ++ I+ V + + P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 234 DDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFN 293
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 294 LPLLMLG-GGGYTIRNVA 310
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 275 (101.9 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 79/318 (24%), Positives = 147/318 (46%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K++V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 9 KKKVCYYYDGDIGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H++ ++ +++I S + + N + +G E L+ G VA V
Sbjct: 67 KYHSDEYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAV 123
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 124 KLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 178
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 179 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNFPMRDG-I 233
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y ++ I+ V + + P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 234 DDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFN 293
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 294 LPLLMLG-GGGYTIRNVA 310
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 275 (101.9 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 79/318 (24%), Positives = 147/318 (46%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K++V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 71 KKKVCYYYDGDIGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 128
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H++ ++ +++I S + + N + +G E L+ G VA V
Sbjct: 129 KYHSDEYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAV 185
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 186 KLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 240
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 241 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNFPMRDG-I 295
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y ++ I+ V + + P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 296 DDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFN 355
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 356 LPLLMLG-GGGYTIRNVA 372
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 273 (101.2 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 79/318 (24%), Positives = 146/318 (45%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K++V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 9 KKKVCYYYDGDIGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H++ ++ +++I S + + N + +G E L+ G VA V
Sbjct: 67 KYHSDEYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAV 123
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 124 KLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 178
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 179 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNFPMRDG-I 233
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y ++ I+ V + + P +++ G D+ +GD LG +T G++ ++ F
Sbjct: 234 DDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVAKTFN 293
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 294 LPLLMLG-GGGYTIRNVA 310
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 275 (101.9 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 79/318 (24%), Positives = 147/318 (46%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K++V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 103 KKKVCYYYDGDIGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 160
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H++ ++ +++I S + + N + +G E L+ G VA V
Sbjct: 161 KYHSDEYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAV 217
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 218 KLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 272
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 273 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNFPMRDG-I 327
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y ++ I+ V + + P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 328 DDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFN 387
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 388 LPLLMLG-GGGYTIRNVA 404
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 272 (100.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 75/299 (25%), Positives = 139/299 (46%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
G HP P+RI+ N L G+ ++ + +A + + H++ ++ +++I
Sbjct: 26 GQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNM 85
Query: 91 DSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HH 146
S + + N + +G E L+ G VA V + A+ G HH
Sbjct: 86 -SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAVKLNRQQTDMAVNWAGGLHH 142
Query: 147 AEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFF 206
A+ EA GFC N++ +A LL ++L +D D+HHG+ ++ F+ RV+
Sbjct: 143 AKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDIHHGDGVEEAFYTTDRVMTV 197
Query: 207 SVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKD 266
S H+ +G ++P D IG G G Y +N P +G D Y ++ I+ V +
Sbjct: 198 SFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNFPMRDG-IDDESYGQIFKPIISKVMEM 252
Query: 267 FGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSIS 325
+ P +++ G D+ +GD LG +T G++ ++ + F ++L GGY + +++
Sbjct: 253 YQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVA 310
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 271 (100.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 81/312 (25%), Positives = 145/312 (46%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
KRRV YD + + G H P+RI+ + + G+ + + A +++
Sbjct: 12 KRRVAYYYDSNIGNYYYGQG--HVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMT 69
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H++ ++ +K+ + S ++ K N L +G E L++G + A ++
Sbjct: 70 RFHSDEYMTFLKSANPDNLKSFNKQML-KFNVGEDCPLFDGLYEFCQLSSGGSLAAATKL 128
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ +++ AI G HHA+ EA GFC N++ + LL ++L VD DV
Sbjct: 129 NKQKVD--IAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYH-----KRVLYVDIDV 181
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G F+P D IG G G Y++NVP +G
Sbjct: 182 HHGDGVEEAFYTTDRVMTVSFHK--YGDFFPGTGD--LKDIGAGKGKLYSVNVPLRDG-I 236
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y +++ I+ V + F P +++ G D+ GD LG +T G+ + +
Sbjct: 237 TDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSY- 295
Query: 308 QGKIVLALEGGY 319
+++ GGY
Sbjct: 296 NVPLMMVGGGGY 307
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 271 (100.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 81/312 (25%), Positives = 145/312 (46%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
KRRV YD + + G H P+RI+ + + G+ + + A +++
Sbjct: 12 KRRVAYYYDSNIGNYYYGQG--HVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMT 69
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H++ ++ +K+ + S ++ K N L +G E L++G + A ++
Sbjct: 70 RFHSDEYMTFLKSANPDNLKSFNKQML-KFNVGEDCPLFDGLYEFCQLSSGGSLAAATKL 128
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ +++ AI G HHA+ EA GFC N++ + LL ++L VD DV
Sbjct: 129 NKQKVD--IAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYH-----KRVLYVDIDV 181
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G F+P D IG G G Y++NVP +G
Sbjct: 182 HHGDGVEEAFYTTDRVMTVSFHK--YGDFFPGTGD--LKDIGAGKGKLYSVNVPLRDG-I 236
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y +++ I+ V + F P +++ G D+ GD LG +T G+ + +
Sbjct: 237 TDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSY- 295
Query: 308 QGKIVLALEGGY 319
+++ GGY
Sbjct: 296 NVPLMMVGGGGY 307
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 267 (99.0 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 80/320 (25%), Positives = 146/320 (45%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
RRV Y+ + N G HP P R+ + + G+ ++ + +A +++L
Sbjct: 4 RRVSYFYNADV--GNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLR 61
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE------GSSEAAYLAAGSVIEVAE 126
H++ ++ ++ ++ + L + E G + + G+ +E A+
Sbjct: 62 FHSDEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQ 121
Query: 127 RVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
++ +S I G HHA+ EA GFC N++ + LL P ++L +D
Sbjct: 122 KLNHN--HSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHP-----RVLYIDI 174
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHG+ Q+ F+ RV+ S H++ F+P D Y IG G Y++NVP + G
Sbjct: 175 DVHHGDGVQEAFYLTDRVMTASFHKYG-NYFFPGTGD-MYE-IGAESGRYYSVNVPLKEG 231
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
D Y V+ I+ + + P I++ G D+ AGD LG ++ G+ +K + +
Sbjct: 232 -IDDQSYFQVFKPIISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKE 290
Query: 306 FAQGKIVLALEGGYNLGSIS 325
+V+ GGY L +++
Sbjct: 291 LNVPTLVVG-GGGYTLRNVA 309
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 268 (99.4 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 106/423 (25%), Positives = 189/423 (44%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
G HP P R+ + A G+ + + + A + L HT ++++ ++ +
Sbjct: 53 GQSHPMKPWRLTLTKQLVLAYGMHHAMDLYHCRAATVEELSDFHTSDYLDFLQTVVPGDM 112
Query: 91 -DSRRDRIASKLNSIYLN--------EGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVR 141
D++ + S+ N + N +G + L AG+ ++ A ++ + + AI
Sbjct: 113 NDAQASKDFSE-NIVRFNFGDDCPIFDGLFQYCSLYAGASLDAARKLCNNQAD--IAINW 169
Query: 142 PPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKD 200
G HHA+ EA GFC N++ +A LL P +++ +D DVHHG+ ++ FW
Sbjct: 170 SGGLHHAKKAEASGFCYVNDIVLAILQLLRIHP-----RVMYIDIDVHHGDGVEQAFWST 224
Query: 201 PRVLFFSVHRHEFGTFYPAND--DGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDH 258
RVL S H+++ F+P D PG + +NVP +G D Y+ ++
Sbjct: 225 DRVLTVSFHKYDKENFFPGTGPLDSTGPTHPLNPGAHHAVNVPLHDG-IDDESYVQLFKD 283
Query: 259 ILLPVAKDFGPDIIIISAGFDAAAGDPLG--GCRVTPYGYSVMLKKLMDFAQGKIVLALE 316
++ F P I++ G D+ D LG V +G V K F +V+
Sbjct: 284 VVGACVSKFRPAAIVLQCGADSLGCDRLGCFNLNVAAHGACVAYTKT--FGLPMLVVG-G 340
Query: 317 GGYNLGSISNSVLACMNVLLE--DK--PVAGSSEAY-----PFESTWRVIQAVRK---KL 364
GGY ++S + ++L++ DK PV S+ A+ P S + + +RK K
Sbjct: 341 GGYTPRNVSRAWAHETSILIDAQDKINPVIPSNVAFRNHFGPDFSLFPPLSEMRKLENKN 400
Query: 365 S-AFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSKLKVDDGHA 423
S A+ T+ + +L L+A P+ +S + + ET E ++ ++KL+ A
Sbjct: 401 SRAYLATIVQTITEQLRYLQAAPSVQMSVIPPDLLGLREET-EKEIEEEIAKLEEKREEA 459
Query: 424 ELG 426
E G
Sbjct: 460 EGG 462
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 269 (99.8 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 80/318 (25%), Positives = 148/318 (46%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K+RV YD + + G HP P+RI+ N + G+ ++ + +A + +
Sbjct: 7 KKRVCYYYDGDVGNYYYGQG--HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMT 64
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H++++V ++ I S + + N + +G E L++G VA V
Sbjct: 65 KYHSDDYVKFLRTIRPDNM-SEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGG--SVAGAV 121
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ + AI G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 122 KLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 176
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 177 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNFPLRDG-I 231
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y ++ I+ V + + P I + G D+ +GD LG +T G++ ++ + +
Sbjct: 232 DDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLSGDRLGCFNLTLKGHAKCVEFMKQYN 291
Query: 308 QGKIVLALEGGYNLGSIS 325
+++ GGY + +++
Sbjct: 292 LPLLLMG-GGGYTIRNVA 308
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 265 (98.3 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 78/322 (24%), Positives = 150/322 (46%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKD 67
G K V Y+ + + + G HP P R+ + + + + ++ + + A
Sbjct: 30 GTNNKYNVSYHYNPEVSRFHY--GALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATK 87
Query: 68 KNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEV 124
LL H+E++++ +++I+ ++ + + ++ N + +G + + + AG+ ++
Sbjct: 88 DELLEFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDA 147
Query: 125 AERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIV 183
++ G S AI G HHA+ E GFC N++ ++ LL P +++ +
Sbjct: 148 TRKLISGM--SDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHP-----RVMYI 200
Query: 184 DWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE 243
D D+HHG+ Q+ F+ RV+ S H++ G F+P G +G G G Y INVP
Sbjct: 201 DIDLHHGDGVQEAFYNTDRVMTVSFHKYN-GEFFPGT--GSVDEVGIGSGKNYAINVPLR 257
Query: 244 NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKL 303
+G D Y+ ++ I+ P+ F P I+ G D+ D LG + + +K +
Sbjct: 258 DG-IDDESYIRLFKSIMEPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFI 316
Query: 304 MDFAQGKIVLALEGGYNLGSIS 325
F +V+ GGY ++S
Sbjct: 317 KSFGIPMLVVG-GGGYTPRNVS 337
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 265 (98.3 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 78/322 (24%), Positives = 150/322 (46%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKD 67
G K V Y+ + + + G HP P R+ + + + + ++ + + A
Sbjct: 30 GTNNKYNVSYHYNPEVSRFHY--GALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATK 87
Query: 68 KNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEV 124
LL H+E++++ +++I+ ++ + + ++ N + +G + + + AG+ ++
Sbjct: 88 DELLEFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDA 147
Query: 125 AERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIV 183
++ G S AI G HHA+ E GFC N++ ++ LL P +++ +
Sbjct: 148 TRKLISGM--SDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHP-----RVMYI 200
Query: 184 DWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE 243
D D+HHG+ Q+ F+ RV+ S H++ G F+P G +G G G Y INVP
Sbjct: 201 DIDLHHGDGVQEAFYNTDRVMTVSFHKYN-GEFFPGT--GSVDEVGIGSGKNYAINVPLR 257
Query: 244 NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKL 303
+G D Y+ ++ I+ P+ F P I+ G D+ D LG + + +K +
Sbjct: 258 DG-IDDESYIRLFKSIMEPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFI 316
Query: 304 MDFAQGKIVLALEGGYNLGSIS 325
F +V+ GGY ++S
Sbjct: 317 KSFGIPMLVVG-GGGYTPRNVS 337
>UNIPROTKB|A6NGJ7 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
Bgee:A6NGJ7 Uniprot:A6NGJ7
Length = 248
Score = 242 (90.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 62/192 (32%), Positives = 95/192 (49%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
H DEA GFC Y N AV L + E +IL VD D+HHG+ + F +V+
Sbjct: 51 HKQMRDEASGFC-YLNDAVLGILRLRRKFE----RILYVDLDLHHGDGVEDAFSFTSKVM 105
Query: 205 FFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVA 264
S+H+ G F+P D + +G G G Y++NVP ++G D Y + + +L V
Sbjct: 106 TVSLHKFSPG-FFPGTGD--VSDVGLGKGRYYSVNVPIQDG-IQDEKYYQICESVLKEVY 161
Query: 265 KDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSI 324
+ F P +++ G D AGDP+ +TP G LK ++ + ++L GGYNL +
Sbjct: 162 QAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGGYNLANT 220
Query: 325 SNSVLACMNVLL 336
+ V+L
Sbjct: 221 ARCWTYLTGVIL 232
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 83/331 (25%), Positives = 156/331 (47%)
Query: 1 MEVKSG-EGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVV 59
+ + SG +GR KRRV Y+ + + G HP P+RI+ + + + +R +
Sbjct: 8 ISLPSGPDGR--KRRVSYFYEPTIGDYYYGQG--HPMKPHRIRMAHSLIIHYHLHRRLEI 63
Query: 60 LNAKEAKDKNLLSVHTENHVNLIKNISSKQF-DSRRDRIASKLN---SIYLNEGSSEAAY 115
A ++ H+ +V+ + ++S + D R + N + +G +
Sbjct: 64 SRPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCR 123
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
+AG I A ++ + + AI G HHA+ EA GFC N++ + LL
Sbjct: 124 ASAGGSIGAAVKLNRQDAD--IAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKM--- 178
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
++L +D DVHHG+ ++ F+ RV+ S H+ FG F+P G +G G
Sbjct: 179 --FKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHK--FGDFFPGT--GHIRDVGAEKGK 232
Query: 235 GYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPY 294
Y +NVP +G D + +++ ++ V + + P+ +++ G D+ +GD LG ++
Sbjct: 233 YYALNVPLNDGM-DDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVK 291
Query: 295 GYSVMLKKLMDFAQGKIVLALEGGYNLGSIS 325
G++ L+ L + +VL GGY + +++
Sbjct: 292 GHADCLRFLRSYNVPLMVLG-GGGYTIRNVA 321
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 256 (95.2 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 72/292 (24%), Positives = 136/292 (46%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P+RI+ N L G+ ++ + +A + + H++ ++ +++I S +
Sbjct: 3 PHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNM-SEYSKQ 61
Query: 98 ASKLN---SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAM 153
+ N + +G E L+ G VA V + A+ G HHA+ EA
Sbjct: 62 MQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 119
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFC N++ +A LL ++L +D D+HHG+ ++ F+ RV+ S H+ +
Sbjct: 120 GFCYVNDIVLAILELLKYH-----QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHK--Y 172
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
G ++P D IG G G Y +N P +G D Y ++ I+ V + + P ++
Sbjct: 173 GEYFPGTGD--LRDIGAGKGKYYAVNFPMRDG-IDDESYGQIFKPIISKVMEMYQPSAVV 229
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSIS 325
+ G D+ +GD LG +T G++ ++ + F ++L GGY + +++
Sbjct: 230 LQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVA 280
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 256 (95.2 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 72/292 (24%), Positives = 136/292 (46%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P+RI+ N L G+ ++ + +A + + H++ ++ +++I S +
Sbjct: 3 PHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNM-SEYSKQ 61
Query: 98 ASKLN---SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAM 153
+ N + +G E L+ G VA V + A+ G HHA+ EA
Sbjct: 62 MQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 119
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFC N++ +A LL ++L +D D+HHG+ ++ F+ RV+ S H+ +
Sbjct: 120 GFCYVNDIVLAILELLKYH-----QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHK--Y 172
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
G ++P D IG G G Y +N P +G D Y ++ I+ V + + P ++
Sbjct: 173 GEYFPGTGD--LRDIGAGKGKYYAVNFPMRDG-IDDESYGQIFKPIISKVMEMYQPSAVV 229
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSIS 325
+ G D+ +GD LG +T G++ ++ + F ++L GGY + +++
Sbjct: 230 LQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVA 280
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 263 (97.6 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 80/280 (28%), Positives = 135/280 (48%)
Query: 48 LQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIY-- 105
++A G+ + V+ A + + HT++++ + IS Q D ++ Y
Sbjct: 1044 IEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKIS--QDGDNDDPQSADFGLGYDC 1101
Query: 106 -LNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAV 163
+ EG + A G+ + A+ + +G+ + AI G HHA+ DEA GFC Y N AV
Sbjct: 1102 PVVEGIFDYAAAVGGATLTAAQNLLDGKCD--VAINWAGGWHHAKKDEASGFC-YVNDAV 1158
Query: 164 AASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDG 223
L E+ +++L VD D+HHG+ + F +V+ S+H+ G F+P D
Sbjct: 1159 LGILKLREK----YDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGD- 1212
Query: 224 FYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG 283
T G G G Y +NVP+E+G D Y + ++ V F P+ +++ G D AG
Sbjct: 1213 -VTDTGLGKGRWYAVNVPFEDG-VRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAG 1270
Query: 284 DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGS 323
DP+ +T G + L ++ + ++L GGYNL +
Sbjct: 1271 DPMCSFNMTSVGVAKCLTYILGWELPTLLLG-GGGYNLAN 1309
>UNIPROTKB|E7EVA8 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
Uniprot:E7EVA8
Length = 299
Score = 149 (57.5 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 199 KDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDH 258
K R+L+ + H + G + +G G G Y++NVP ++G D Y + +
Sbjct: 168 KFERILYVDLDLHH------GDGTGDVSDVGLGKGRYYSVNVPIQDG-IQDEKYYQICES 220
Query: 259 ILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGG 318
+L V + F P +++ G D AGDP+ +TP G LK ++ + ++L GG
Sbjct: 221 VLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGG 279
Query: 319 YNLGSISNSVLACMNVLL 336
YNL + + V+L
Sbjct: 280 YNLANTARCWTYLTGVIL 297
Score = 149 (57.5 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 46/158 (29%), Positives = 75/158 (47%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + + HT+ ++ ++ +S + D D I
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSI 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G+ I A+ + +G AI G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
C Y N AV L + E +IL VD D+HHG+ T
Sbjct: 153 C-YLNDAVLGILRLRRKFE----RILYVDLDLHHGDGT 185
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 254 (94.5 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 76/299 (25%), Positives = 134/299 (44%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
G HP P R+ + + + G+ + + + A LL H+E++VN + +S +
Sbjct: 42 GVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHSEDYVNFLSKVSPENA 101
Query: 91 DSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HH 146
+ N + + + L G+ ++ ++ + S AI G HH
Sbjct: 102 NKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ--SDIAINWSGGLHH 159
Query: 147 AEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFF 206
A+ + GFC N++ ++ LL P +IL +D D+HHG+ Q+ F+ RV
Sbjct: 160 AKKNSPSGFCYVNDIVLSILNLLRYHP-----RILYIDIDLHHGDGVQEAFYTTDRVFTL 214
Query: 207 SVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKD 266
S H++ G F+P D T IG G + +NVP E+G D Y+ ++ I+ P+
Sbjct: 215 SFHKYN-GEFFPGTGD--LTEIGCDKGKHFALNVPLEDG-IDDDSYINLFKSIVDPLIMT 270
Query: 267 FGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSIS 325
F P +I+ G D+ D LG + + +K + F +V+ GGY ++S
Sbjct: 271 FKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVG-GGGYTPRNVS 328
Score = 41 (19.5 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 21/68 (30%), Positives = 30/68 (44%)
Query: 532 NDVLLQENVYSD----DVSSPLFDT----NDLNSVANKKAVSLEALKNGWYHNVVYLGKE 583
NDVLL E++ D D P + +DL N K + LE ++ N+ YL
Sbjct: 339 NDVLLPEDIPEDIPFRDSFGPDYSLYPMLDDLYENKNSKKL-LEDIRIRCLENIRYL--- 394
Query: 584 HGIPILTM 591
G P + M
Sbjct: 395 QGAPSVRM 402
>UNIPROTKB|F1NYW6 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
Uniprot:F1NYW6
Length = 357
Score = 220 (82.5 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 70/228 (30%), Positives = 107/228 (46%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH D+ GFC Y ++ +A FL P G++K I+D D H GN ++ F D RV
Sbjct: 141 HHCSSDKGGGFCAYADITLAIKFLFERVP--GVSKATIIDLDAHQGNGHERDFMNDHRVY 198
Query: 205 FFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA-VWDHILLPV 263
+ YP DGF + + + W D +YL V H+
Sbjct: 199 IMDAYNRYI---YPG--DGFAKR-----AIKRKVELEWGTE---DTEYLQKVHTHVE-GA 244
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK---IVLALEGGYN 320
+ PDII+ +AG D GDPLGG ++P G + + A+ + I++ GGY
Sbjct: 245 LNELKPDIIVYNAGTDILDGDPLGGLAISPQGIVKRDEVVFKAARSRGIPILMVTSGGYQ 304
Query: 321 LGS---ISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLS 365
+ I++S+L N+ L DK +A +SEA ES +V Q +R ++
Sbjct: 305 KRTARIIADSILNLHNLGLIDKELA-TSEA---ESP-KVDQMIRDSVT 347
Score = 68 (29.0 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
HP + + + N L+ + +++ A+EA D++LL VHT ++N +K
Sbjct: 34 HPFDAGKWGKVINFLKEEKLIGDDLIVQAREATDEDLLVVHTRRYLNKLK 83
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 249 (92.7 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 84/311 (27%), Positives = 145/311 (46%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
G HP P+R+ + + A G+ + V +A + H+ ++V ++ I+ +
Sbjct: 21 GPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHSPDYVEFLQRINPENQ 80
Query: 91 DSRRDRIAS-KLNS-IYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHA 147
+ + +A L + E E L AG I+ A R+ +L AI G HHA
Sbjct: 81 NLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRL-NNKLCD-IAINWAGGLHHA 138
Query: 148 EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFS 207
+ +A GFC N++ + LL P ++L +D DVHHG+ ++ F+ RV+ S
Sbjct: 139 KKCDASGFCYINDLVLGILELLKHHP-----RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
Query: 208 VHRHEFGT-FYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKD 266
H+ FG F+P D IGE G Y INVP ++G D+ + ++ I+ V +
Sbjct: 194 FHK--FGDKFFPGTGD--VKEIGEREGKFYAINVPLKDG-IDDSSFNRLFRTIISKVVEI 248
Query: 267 FGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISN 326
+ P I++ G D+ A D LG ++ G++ +K + F +V GGY +++
Sbjct: 249 YQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTG-GGGYTKENVAR 307
Query: 327 SVLACMNVLLE 337
+LL+
Sbjct: 308 CWTVETGILLD 318
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 247 (92.0 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 62/219 (28%), Positives = 109/219 (49%)
Query: 108 EGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAAS 166
+G E L+AG + A V + + A+ G HHA+ EA GFC N++ +A
Sbjct: 12 DGLFEFCQLSAGGSVGPASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAIL 71
Query: 167 FLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYT 226
LL ++L +D D+HHG+ ++ F+ RV+ S H+ +G ++P D
Sbjct: 72 ELLKYH-----QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LR 122
Query: 227 MIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPL 286
IG G G Y +N P +G D Y A++ ++ V + F P +++ G D+ +GD L
Sbjct: 123 DIGAGKGKYYAVNYPLRDG-IDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 181
Query: 287 GGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSIS 325
G +T G++ ++ + F ++L GGY + +++
Sbjct: 182 GCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVA 219
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 249 (92.7 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 77/318 (24%), Positives = 143/318 (44%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K++V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 9 KKKVCYYYDGDIGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H++ ++ +++I S + + N + +G E L+ G VA V
Sbjct: 67 KYHSDEYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAV 123
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 124 KLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 178
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ +V +P D IG G G Y +N P +G
Sbjct: 179 HHGDGVEEAFYTTDRVM--TVSEVSMVNNFPGTGD--LRDIGAGKGKYYAVNFPMRDG-I 233
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y ++ I+ V + + P +++ G D+ +GD LG +T G++ ++ + F
Sbjct: 234 DDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFN 293
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 294 LPLLMLG-GGGYTIRNVA 310
>UNIPROTKB|Q4KAJ1 [details] [associations]
symbol:aphA_1 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
Uniprot:Q4KAJ1
Length = 342
Score = 235 (87.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 63/218 (28%), Positives = 102/218 (46%)
Query: 112 EAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNE 171
+A +A + + EG+ +SAFA+ RPPGHHA + G+C NN A+AA +
Sbjct: 126 DAVRTSADIALTALALIDEGQ-DSAFALCRPPGHHAAREYMGGYCYLNNAAIAAQHAITR 184
Query: 172 RPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEG 231
G ++ ++D D HHGN TQ +F+ VLF S+H YP G + G G
Sbjct: 185 ----GARRVAVLDVDFHHGNGTQNIFYDRGDVLFVSLHGDP-AVSYPYFS-GHASERGSG 238
Query: 232 PGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRV 291
G G N+N+P A+ + + F P+++++S G D DP+ +
Sbjct: 239 AGEGCNLNLPLPKNTSWQHYRQAL--ELACKQLRAFAPELLVVSLGVDTFKDDPISHFLL 296
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSIS-NSV 328
+ M +++ + +EGGY + I N+V
Sbjct: 297 ESEDFLGM-GQIIATVGTPTLFVMEGGYMVDEIGINAV 333
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 239 (89.2 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 82/345 (23%), Positives = 152/345 (44%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+ V YD + N G HP P+R+ + + G+ ++ +V +A ++
Sbjct: 3 KTVAYFYDPDV--GNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE------GSSEAAYLAAGSVIEVAE 126
H+E++++ ++ +S LN+ + + G E G+ ++ A
Sbjct: 61 FHSEDYIDFLQRVSPNNMQG----FTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGAT 116
Query: 127 RVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
++ + AI G HHA+ EA GFC N++ + LL P ++L +D
Sbjct: 117 QLNNKICD--IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHP-----RVLYIDI 169
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHG+ Q+ F+ RV+ S H++ F+P D Y +G G Y +NVP +G
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKYG-NYFFPGTGD-MYE-VGAESGRYYALNVPLRDG 226
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
D Y ++ ++ V + P I++ G D+ D LG ++ G+ ++ +
Sbjct: 227 -IDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEYVKS 285
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPF 350
F +VL GGY + +++ LL D+ + SE P+
Sbjct: 286 FNIPLLVLG-GGGYTVRNVARC-WTYETSLLVDEAI---SEELPY 325
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 238 (88.8 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 78/333 (23%), Positives = 149/333 (44%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+ V YD + N G HP P+R+ + + G+ ++ +V +A ++
Sbjct: 3 KTVAYFYDPDV--GNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE------GSSEAAYLAAGSVIEVAE 126
H+E++++ ++ +S LN+ + + G E G+ ++ A
Sbjct: 61 FHSEDYIDFLQRVSPTNMQG----FTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGAT 116
Query: 127 RVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
++ + AI G HHA+ EA GFC N++ + LL P ++L +D
Sbjct: 117 QLNNKICD--IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHP-----RVLYIDI 169
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHG+ Q+ F+ RV+ S H++ F+P D Y +G G Y +NVP +G
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKYG-NYFFPGTGD-MYE-VGAESGRYYCLNVPLRDG 226
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
D Y ++ ++ V + P I++ G D+ D LG ++ G+ ++ +
Sbjct: 227 -IDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKS 285
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
F +VL GGY + +++ ++L+E+
Sbjct: 286 FNIPLLVLG-GGGYTVRNVARCWTYETSLLVEE 317
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 238 (88.8 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 78/333 (23%), Positives = 149/333 (44%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+ V YD + N G HP P+R+ + + G+ ++ +V +A ++
Sbjct: 3 KTVAYFYDPDV--GNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE------GSSEAAYLAAGSVIEVAE 126
H+E++++ ++ +S LN+ + + G E G+ ++ A
Sbjct: 61 FHSEDYIDFLQRVSPTNMQG----FTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGAT 116
Query: 127 RVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
++ + AI G HHA+ EA GFC N++ + LL P ++L +D
Sbjct: 117 QLNNKICD--IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHP-----RVLYIDI 169
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHG+ Q+ F+ RV+ S H++ F+P D Y +G G Y +NVP +G
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKYG-NYFFPGTGD-MYE-VGAESGRYYCLNVPLRDG 226
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
D Y ++ ++ V + P I++ G D+ D LG ++ G+ ++ +
Sbjct: 227 -IDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKS 285
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
F +VL GGY + +++ ++L+E+
Sbjct: 286 FNIPLLVLG-GGGYTVRNVARCWTYETSLLVEE 317
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 238 (88.8 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 78/333 (23%), Positives = 149/333 (44%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+ V YD + N G HP P+R+ + + G+ ++ +V +A ++
Sbjct: 3 KTVAYFYDPDV--GNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE------GSSEAAYLAAGSVIEVAE 126
H+E++++ ++ +S LN+ + + G E G+ ++ A
Sbjct: 61 FHSEDYIDFLQRVSPTNMQG----FTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGAT 116
Query: 127 RVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
++ + AI G HHA+ EA GFC N++ + LL P ++L +D
Sbjct: 117 QLNNKICD--IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHP-----RVLYIDI 169
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHG+ Q+ F+ RV+ S H++ F+P D Y +G G Y +NVP +G
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKYG-NYFFPGTGD-MYE-VGAESGRYYCLNVPLRDG 226
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
D Y ++ ++ V + P I++ G D+ D LG ++ G+ ++ +
Sbjct: 227 -IDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKS 285
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
F +VL GGY + +++ ++L+E+
Sbjct: 286 FNIPLLVLG-GGGYTVRNVARCWTYETSLLVEE 317
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 237 (88.5 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 82/345 (23%), Positives = 152/345 (44%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+ V YD + N G HP P+R+ + + G+ ++ +V +A ++
Sbjct: 3 KTVAYFYDPDV--GNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE------GSSEAAYLAAGSVIEVAE 126
H+E++++ ++ +S LN+ + + G E G+ ++ A
Sbjct: 61 FHSEDYIDFLQRVSPNNMQG----FTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGAT 116
Query: 127 RVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
++ + AI G HHA+ EA GFC N++ + LL P ++L +D
Sbjct: 117 QLNNKICD--IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHP-----RVLYIDI 169
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHG+ Q+ F+ RV+ S H++ F+P D Y +G G Y +NVP +G
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKYG-NYFFPGTGD-MYE-VGAESGRYYCLNVPLRDG 226
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
D Y ++ ++ V + P I++ G D+ D LG ++ G+ ++ +
Sbjct: 227 -IDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKS 285
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPF 350
F +VL GGY + +++ LL D+ + SE P+
Sbjct: 286 FNIPLLVLG-GGGYTVRNVARC-WTYETSLLVDEAI---SEELPY 325
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 237 (88.5 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 78/333 (23%), Positives = 149/333 (44%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+ V YD + N G HP P+R+ + + G+ ++ +V +A ++
Sbjct: 3 KTVAYFYDPDV--GNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE------GSSEAAYLAAGSVIEVAE 126
H+E++++ ++ +S LN+ + + G E G+ ++ A
Sbjct: 61 FHSEDYIDFLQRVSPTNMQG----FTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGAT 116
Query: 127 RVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
++ + AI G HHA+ EA GFC N++ + LL P ++L +D
Sbjct: 117 QLNNKICD--IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHP-----RVLYIDI 169
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHG+ Q+ F+ RV+ S H++ F+P D Y +G G Y +NVP +G
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKYG-NYFFPGTGD-MYE-VGAESGRYYCLNVPLRDG 226
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
D Y ++ ++ V + P I++ G D+ D LG ++ G+ ++ +
Sbjct: 227 -IDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKS 285
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
F +VL GGY + +++ ++L+E+
Sbjct: 286 FNIPLLVLG-GGGYTVRNVARCWTYETSLLVEE 317
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 237 (88.5 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 78/333 (23%), Positives = 149/333 (44%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+ V YD + N G HP P+R+ + + G+ ++ +V +A ++
Sbjct: 3 KTVAYFYDPDV--GNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE------GSSEAAYLAAGSVIEVAE 126
H+E++++ ++ +S LN+ + + G E G+ ++ A
Sbjct: 61 FHSEDYIDFLQRVSPTNMQG----FTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGAT 116
Query: 127 RVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
++ + AI G HHA+ EA GFC N++ + LL P ++L +D
Sbjct: 117 QLNNKICD--IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHP-----RVLYIDI 169
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHG+ Q+ F+ RV+ S H++ F+P D Y +G G Y +NVP +G
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKYG-NYFFPGTGD-MYE-VGAESGRYYCLNVPLRDG 226
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
D Y ++ ++ V + P I++ G D+ D LG ++ G+ ++ +
Sbjct: 227 -IDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKS 285
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
F +VL GGY + +++ ++L+E+
Sbjct: 286 FNIPLLVLG-GGGYTVRNVARCWTYETSLLVEE 317
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 237 (88.5 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 78/333 (23%), Positives = 149/333 (44%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+ V YD + N G HP P+R+ + + G+ ++ +V +A ++
Sbjct: 3 KTVAYFYDPDV--GNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE------GSSEAAYLAAGSVIEVAE 126
H+E++++ ++ +S LN+ + + G E G+ ++ A
Sbjct: 61 FHSEDYIDFLQRVSPTNMQG----FTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGAT 116
Query: 127 RVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
++ + AI G HHA+ EA GFC N++ + LL P ++L +D
Sbjct: 117 QLNNKICD--IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHP-----RVLYIDI 169
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHG+ Q+ F+ RV+ S H++ F+P D Y +G G Y +NVP +G
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKYG-NYFFPGTGD-MYE-VGAESGRYYCLNVPLRDG 226
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
D Y ++ ++ V + P I++ G D+ D LG ++ G+ ++ +
Sbjct: 227 -IDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKS 285
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
F +VL GGY + +++ ++L+E+
Sbjct: 286 FNIPLLVLG-GGGYTVRNVARCWTYETSLLVEE 317
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 158 (60.7 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 34/101 (33%), Positives = 53/101 (52%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HHA+ EA GFC N++ +A LL ++L +D D+HHG+ ++ F+ RV+
Sbjct: 115 HHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDIHHGDGVEEAFYTTDRVM 169
Query: 205 FFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
S H+ +G ++P D IG G G Y +N P +G
Sbjct: 170 TVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG 206
Score = 85 (35.0 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 24/120 (20%), Positives = 55/120 (45%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 8 RRKVCYYYDGDVGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H+++++ +++I S + + +++ LN+ ++ A AG + + A G
Sbjct: 66 KYHSDDYIKFLRSIRPDNM-SEYSKQMQRSSAVKLNKQQTDIAVNWAGGLHHAKKSEASG 124
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 236 (88.1 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 80/335 (23%), Positives = 145/335 (43%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R YD + N G HP P+R+ + + G+ ++ +V +A ++
Sbjct: 4 RTAYFYDPDV--GNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRF 61
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+E++++ ++ +S LN+ N G + + E R L
Sbjct: 62 HSEDYIDFLQKVSPNNMQG----FTKSLNTF--NVGGDCPVF---PGLFEFCSRYTGASL 112
Query: 134 NSA---------FAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIV 183
A AI G HHA+ EA GFC N++ ++ LL P ++L +
Sbjct: 113 QGATQLNHKICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHP-----RVLYI 167
Query: 184 DWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE 243
D D+HHG+ Q+ F+ RV+ S H++ F+P D Y +G G Y +NVP
Sbjct: 168 DIDIHHGDGVQEAFYLTDRVMTVSFHKYG-NYFFPGTGD-MYE-VGAESGRYYCLNVPLR 224
Query: 244 NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKL 303
+G D Y ++ ++ V + P I++ G D+ D LG ++ G+ ++ +
Sbjct: 225 DG-IDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFV 283
Query: 304 MDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
F +VL GGY + +++ ++L+E+
Sbjct: 284 KGFKIPLLVLG-GGGYTVRNVARCWTFETSLLVEE 317
>UNIPROTKB|A6NMT1 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
Bgee:A6NMT1 Uniprot:A6NMT1
Length = 253
Score = 210 (79.0 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 64/225 (28%), Positives = 107/225 (47%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + + HT+ ++ ++ +S + D D I
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSI 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G+ I A+ + +G AI G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C Y N AV L + E +IL VD D+HHG+ + F +V+ S+H+ G
Sbjct: 153 C-YLNDAVLGILRLRRKFE----RILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG- 206
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHIL 260
F+P D + +G G G Y++NVP ++G D Y + + L
Sbjct: 207 FFPGTGD--VSDVGLGKGRYYSVNVPIQDG-IQDEKYYQICERAL 248
>UNIPROTKB|E7ENE4 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI01018767
ProteinModelPortal:E7ENE4 SMR:E7ENE4 Ensembl:ENST00000373561
ArrayExpress:E7ENE4 Bgee:E7ENE4 Uniprot:E7ENE4
Length = 272
Score = 210 (79.0 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 63/224 (28%), Positives = 107/224 (47%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + + HT+ ++ ++ +S + D D I
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSI 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G+ I A+ + +G AI G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C Y N AV L + E +IL VD D+HHG+ + F +V+ S+H+ G
Sbjct: 153 C-YLNDAVLGILRLRRKFE----RILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG- 206
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHI 259
F+P D + +G G G Y++NVP ++G D Y + + +
Sbjct: 207 FFPGKSD--VSDVGLGKGRYYSVNVPIQDG-IQDEKYYQICESV 247
>UNIPROTKB|I3L5X0 [details] [associations]
symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062889 EMBL:CU466457
Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
Length = 256
Score = 208 (78.3 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 60/210 (28%), Positives = 102/210 (48%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + + HT+ ++ ++ +S + D D I
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSI 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G+ I A+ + +G AI G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C Y N AV L + ++IL VD D+HHG+ + F +V+ S+H+ G
Sbjct: 153 C-YLNDAVLGILRLRRK----FDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG- 206
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENG 245
F+P D + +G G G Y++NVP ++G
Sbjct: 207 FFPGTGD--VSDVGLGKGRYYSVNVPIQDG 234
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 222 (83.2 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 73/318 (22%), Positives = 139/318 (43%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K++V YD + + G HP P+RI+ N L G+ ++ + +A + +
Sbjct: 9 KKKVCYYYDGDIGNYYYGQG--HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERV 128
H++ ++ +++I S + + N + +G E L+ G VA V
Sbjct: 67 KYHSDEYIKFLRSIRPDNM-SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAV 123
Query: 129 AEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ A+ G HHA+ EA GFC N++ +A LL ++L +D D+
Sbjct: 124 KLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-----QRVLYIDIDI 178
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG+ ++ F+ RV+ S H+ +G ++P D IG G G Y +N P +G
Sbjct: 179 HHGDGVEEAFYTTDRVMTVSFHK--YGEYFPGTGD--LRDIGAGKGKYYAVNFPMRDG-I 233
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D Y ++ ++ + + P + + +AGD G++ ++ + F
Sbjct: 234 DDESYGQIFKPVITKIGEITFPTKVCLEIQPVHSAGDQFWVFVYCVKGHAKCVEVVKTFN 293
Query: 308 QGKIVLALEGGYNLGSIS 325
++L GGY + +++
Sbjct: 294 LPLLMLG-GGGYTIRNVA 310
>UNIPROTKB|F1SPG6 [details] [associations]
symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00390000003411 EMBL:CU928273
Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
Length = 382
Score = 198 (74.8 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 57/192 (29%), Positives = 90/192 (46%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH D GFC Y ++ +A FL ER E GI++ I+D D H GN ++ F D RV
Sbjct: 141 HHCSSDRGGGFCAYADITLAIKFLF-ERVE-GISRATIIDLDAHQGNGHERDFMGDKRVY 198
Query: 205 FFSVH-RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPV 263
V+ RH YP D F + + + W D +YL + L
Sbjct: 199 IMDVYNRH----IYPG--DRFAKQ-----AIRRKVELEWATE---DDEYLTKVERNLEKA 244
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY---SVMLKKLMDFAQGKIVLALEGGYN 320
++ PD+++ +AG D GD LGG ++P G ++ +++ Q I++ GGY
Sbjct: 245 LQEHRPDVVVYNAGTDVLEGDRLGGLSISPQGIVKRDELVFRMVRSLQVPILMVTSGGYQ 304
Query: 321 LGS---ISNSVL 329
+ I++S+L
Sbjct: 305 KRTARIIADSIL 316
Score = 64 (27.6 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
HP + + + + L+ + +++ A+EA D++LL VHT ++N +K
Sbjct: 34 HPFDAGKWGKVISFLKEEKLLTDSMLVEAREASDEDLLVVHTRRYLNELK 83
>UNIPROTKB|F1PSI9 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
Length = 319
Score = 193 (73.0 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 59/197 (29%), Positives = 91/197 (46%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH D GFC Y ++ +A FL ER E GI++ IVD D H GN ++ F D RV
Sbjct: 114 HHCSSDRGGGFCAYADITLAIKFLF-ERVE-GISRATIVDLDAHQGNGHERDFMGDKRVY 171
Query: 205 FFSVH-RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPV 263
V+ RH YP D F + + + W D +YL + L
Sbjct: 172 IMDVYNRH----IYPG--DRFAKQ-----AIRRKVELEWGTE---DDEYLDKVERNLQKA 217
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK---IVLALEGGYN 320
++ PD+++ +AG D GD LGG ++P G + + +G+ I++ GGY
Sbjct: 218 LQEHLPDVVVYNAGTDILEGDRLGGLSISPQGIVKRDELVFRVVRGRQVPILMVTSGGYQ 277
Query: 321 LGS---ISNSVLACMNV 334
+ I++S+L +V
Sbjct: 278 KRTARIIADSILNLYSV 294
Score = 63 (27.2 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
HP + + + + L+ + +++ A+EA D++LL VHT ++N +K
Sbjct: 7 HPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDEDLLVVHTRRYLNELK 56
>UNIPROTKB|F1MWX4 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
Length = 386
Score = 196 (74.1 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 59/192 (30%), Positives = 89/192 (46%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH D GFC Y ++ +A FL +R E GI+K IVD D H GN ++ F D RV
Sbjct: 141 HHCSSDRGGGFCAYADITLAIKFLF-DRVE-GISKATIVDLDAHQGNGHERDFMGDKRVY 198
Query: 205 FFSVH-RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPV 263
V+ RH YP D F + + + W D +YL + L
Sbjct: 199 IMDVYNRH----IYPG--DRFAKQ-----AIRRKVELEWGTE---DDEYLQKVERNLEKA 244
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK---IVLALEGGYN 320
++ PDI++ +AG D GD LGG ++P G + + +G+ I++ GGY
Sbjct: 245 LQEHRPDIVVYNAGTDILEGDRLGGLAISPQGVVKRDELVFRIVRGRQLPILMVTSGGYQ 304
Query: 321 LGS---ISNSVL 329
+ I++S+L
Sbjct: 305 KRTARIIADSIL 316
Score = 66 (28.3 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
HP + + + + L+ + +++ A+EA D++LL VHT ++N +K
Sbjct: 34 HPFDAGKWGKVISLLKEEKLLSDSMLVEAREASDEDLLVVHTRRYLNELK 83
>UNIPROTKB|E7ETT9 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
Uniprot:E7ETT9
Length = 319
Score = 188 (71.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 56/192 (29%), Positives = 89/192 (46%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH D GFC Y ++ +A FL ER E GI++ I+D D H GN ++ F D RV
Sbjct: 114 HHCSSDRGGGFCAYADITLAIKFLF-ERVE-GISRATIIDLDAHQGNGHERDFMDDKRVY 171
Query: 205 FFSVH-RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPV 263
V+ RH YP D F + + + W D +YL + +
Sbjct: 172 IMDVYNRH----IYPG--DRFAKQ-----AIRRKVELEWGTE---DDEYLDKVERNIKKS 217
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK---IVLALEGGYN 320
++ PD+++ +AG D GD LGG ++P G + + +G+ I++ GGY
Sbjct: 218 LQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQ 277
Query: 321 LGS---ISNSVL 329
+ I++S+L
Sbjct: 278 KRTARIIADSIL 289
Score = 66 (28.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
HP + + + N L+ + +++ A+EA +++LL VHT ++N +K
Sbjct: 7 HPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK 56
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 216 (81.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 86/337 (25%), Positives = 142/337 (42%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+ V YD + N G HP P+R+ + + G+ ++ +V K + L
Sbjct: 3 KTVAYFYDPDV--GNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVKTPSRNKQEKLCP 60
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAA-YLAAGSVIEVAERVAEG 131
VH V LI S +F + S LN G E + + E R
Sbjct: 61 VHG---VPLIW--FSTRFGPK-----SLLNGSVSGSGVEEGREFPVFPGLFEFCSRYTGA 110
Query: 132 ELNSA---------FAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
L A AI G HHA+ EA GFC N++ + LL P ++L
Sbjct: 111 SLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHP-----RVL 165
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
+D D+HHG+ Q+ F+ RV+ S H++ F+P D Y +G G Y +NVP
Sbjct: 166 YIDIDIHHGDGVQEAFYLTDRVMTVSFHKYG-NYFFPGTGD-MYE-VGAESGRYYCLNVP 222
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLK 301
+G D Y ++ ++ V + P I++ G D+ D LG ++ G+ ++
Sbjct: 223 LRDG-IDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVE 281
Query: 302 KLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
+ F +VL GGY + +++ ++L+E+
Sbjct: 282 YVKSFNIPLLVLG-GGGYTVRNVARCWTYETSLLVEE 317
>UNIPROTKB|I3LTU6 [details] [associations]
symbol:LOC100738481 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:FP700091
Ensembl:ENSSSCT00000024978 Uniprot:I3LTU6
Length = 275
Score = 182 (69.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 48/150 (32%), Positives = 70/150 (46%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH D GFC Y ++ +A FL ER E GI++ I+D D H GN ++ F D RV
Sbjct: 141 HHCSSDRGGGFCAYADITLAIKFLF-ERVE-GISRATIIDLDAHQGNGHERDFMGDKRVY 198
Query: 205 FFSVH-RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPV 263
V+ RH YP D F + + + W D +YL + L
Sbjct: 199 IMDVYNRH----IYPG--DRFAKQ-----AIRRKVELEWATE---DDEYLTKVERNLEKA 244
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTP 293
++ PD+++ +AG D GD LGG ++P
Sbjct: 245 LQEHRPDVVVYNAGTDVLEGDRLGGLSISP 274
Score = 64 (27.6 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
HP + + + + L+ + +++ A+EA D++LL VHT ++N +K
Sbjct: 34 HPFDAGKWGKVISFLKEEKLLTDSMLVEAREASDEDLLVVHTRRYLNELK 83
>UNIPROTKB|Q96DB2 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
Length = 347
Score = 188 (71.2 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 56/192 (29%), Positives = 89/192 (46%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH D GFC Y ++ +A FL ER E GI++ I+D D H GN ++ F D RV
Sbjct: 142 HHCSSDRGGGFCAYADITLAIKFLF-ERVE-GISRATIIDLDAHQGNGHERDFMDDKRVY 199
Query: 205 FFSVH-RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPV 263
V+ RH YP D F + + + W D +YL + +
Sbjct: 200 IMDVYNRH----IYPG--DRFAKQ-----AIRRKVELEWGTE---DDEYLDKVERNIKKS 245
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK---IVLALEGGYN 320
++ PD+++ +AG D GD LGG ++P G + + +G+ I++ GGY
Sbjct: 246 LQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQ 305
Query: 321 LGS---ISNSVL 329
+ I++S+L
Sbjct: 306 KRTARIIADSIL 317
Score = 66 (28.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
HP + + + N L+ + +++ A+EA +++LL VHT ++N +K
Sbjct: 35 HPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK 84
>UNIPROTKB|E7ESJ6 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
Bgee:E7ESJ6 Uniprot:E7ESJ6
Length = 219
Score = 193 (73.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 49/169 (28%), Positives = 82/169 (48%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HHA+ EA GFC N++ + LL P ++L +D D+HHG+ Q+ F+ RV+
Sbjct: 59 HHAKKFEASGFCYVNDIVIGILELLKYHP-----RVLYIDIDIHHGDGVQEAFYLTDRVM 113
Query: 205 FFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVA 264
S H++ F+P D Y +G G Y +NVP +G D Y ++ ++ V
Sbjct: 114 TVSFHKYG-NYFFPGTGD-MYE-VGAESGRYYCLNVPLRDG-IDDQSYKHLFQPVINQVV 169
Query: 265 KDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ P I++ G D+ D LG ++ G+ ++ + F +VL
Sbjct: 170 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVL 218
>UNIPROTKB|Q9GKU5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
fascicularis" [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
Length = 347
Score = 187 (70.9 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 56/192 (29%), Positives = 89/192 (46%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH D GFC Y ++ +A FL ER E GI++ I+D D H GN ++ F D RV
Sbjct: 142 HHCSSDRGGGFCAYADITLAIKFLF-ERVE-GISRATIIDLDAHQGNGHERDFMDDKRVY 199
Query: 205 FFSVH-RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPV 263
V+ RH YP D F + + + W D +YL + +
Sbjct: 200 IMDVYNRH----IYPG--DRFAKQ-----AIRRKVELEWGTE---DDEYLDKVERNIEKS 245
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK---IVLALEGGYN 320
++ PD+++ +AG D GD LGG ++P G + + +G+ I++ GGY
Sbjct: 246 LQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRHVPILMVTSGGYQ 305
Query: 321 LGS---ISNSVL 329
+ I++S+L
Sbjct: 306 KRTARIIADSIL 317
Score = 66 (28.3 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
HP + + + N L+ + +++ A+EA +++LL VHT ++N +K
Sbjct: 35 HPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK 84
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 212 (79.7 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 78/313 (24%), Positives = 141/313 (45%)
Query: 19 YDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENH 78
YD +N G HP P++I+ N + G+ ++ + +A + + H++++
Sbjct: 3 YDGDAGNYNYGQG--HPVKPHQIRMTHNLPLSYGLYRKMEIYRPHKANAEEMTKYHSDDY 60
Query: 79 VNLIKNI---SSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+ ++ I S ++ + R + N G SE L+ G + A ++ + + +
Sbjct: 61 IKFLRFIRPDSMSEYIKQMQRFNVGQDCPVFN-GLSEFCQLSTGGSVASAVKLNKQQTDI 119
Query: 136 AFAIVRPPG--HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
A V G HHA+ EA GFC N++ +A LL + ++L +D D HHG+ T
Sbjct: 120 A---VNWAGDLHHAKNSEASGFCYVNDIVLAILELLKY-----LQRVLCMDIDTHHGDGT 171
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
++ F+ V+ S H +P D IG G G Y IN P + C D +
Sbjct: 172 EEAFYTADWVMTVSFHN------FPVTGD--LRDIGAGKGKYYAINYPLRD--CIDDESC 221
Query: 254 AVWDHILLPV-AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ I PV +K P +++ G D+ +GD LG +T G+ + + F ++
Sbjct: 222 ---EAIFKPVMSKVMEPSAVVLQCGSDSLSGDWLGSFNLTIKGHKCV-GFVKSFNLPMLM 277
Query: 313 LALEGGYNLGSIS 325
L GGY + +++
Sbjct: 278 LR-GGGYTIHNVA 289
>ZFIN|ZDB-GENE-040704-7 [details] [associations]
symbol:hdac11 "histone deacetylase 11" species:7955
"Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
Length = 366
Score = 194 (73.4 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 60/192 (31%), Positives = 90/192 (46%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH D+ GFC Y ++ +A FL ER E G+ I+D D H GN ++ F +D RV
Sbjct: 153 HHCSSDKGGGFCAYADITLAIKFLF-ERVE-GVASATIIDLDAHQGNGHERDFLEDRRVY 210
Query: 205 FFSVH-RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPV 263
V+ RH YP DG+ + + + W D++YL D
Sbjct: 211 IMDVYNRH----IYPG--DGYAKR-----AIKRKVELDWGTE---DSEYLQKVDLHSEGA 256
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK---IVLALEGGYN 320
+ PDIII +AG D GDPLGG ++P G + + A+ + I++ GGY
Sbjct: 257 LNEARPDIIIYNAGTDILDGDPLGGLAISPQGIIKRDEIIFRAARRRGIPILMVTSGGYQ 316
Query: 321 LGS---ISNSVL 329
+ I++S+L
Sbjct: 317 KKTARIIADSIL 328
Score = 57 (25.1 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 58 VVLNAKEAKDKNLLSVHTENHVNLIK 83
+++ A+EA + +LL VHT ++N +K
Sbjct: 70 IIVLAREASEADLLVVHTARYLNRLK 95
>MGI|MGI:2385252 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
Length = 347
Score = 179 (68.1 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 55/192 (28%), Positives = 89/192 (46%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH D GFC Y ++ +A FL ER E GI++ I+D D H GN ++ F D RV
Sbjct: 142 HHCSSDRGGGFCAYADITLAIKFLF-ERVE-GISRATIIDLDAHQGNGHERDFMGDKRVY 199
Query: 205 FFSVH-RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPV 263
V+ RH YP D F + + + W D +YL + +
Sbjct: 200 IMDVYNRH----IYPG--DRFAK-----EAIRRKVELEWGTE---DEEYLEKVERNVRRS 245
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY---SVMLKKLMDFAQGKIVLALEGGYN 320
++ PD+++ +AG D GD LGG ++P G ++ +++ I++ GGY
Sbjct: 246 LQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVTSGGYQ 305
Query: 321 LGS---ISNSVL 329
+ I++S+L
Sbjct: 306 KRTARIIADSIL 317
Score = 64 (27.6 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
HP + + + N L+ + +++ A+EA +++LL VHT ++N +K
Sbjct: 35 HPFDAGKWGKVINFLKEEKLLSDGMLVEAREASEEDLLVVHTRRYLNELK 84
>RGD|1311706 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
development" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
Genevestigator:B2GUW3 Uniprot:B2GUW3
Length = 347
Score = 179 (68.1 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 55/192 (28%), Positives = 89/192 (46%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH D GFC Y ++ +A FL ER E GI++ I+D D H GN ++ F D RV
Sbjct: 142 HHCSSDRGGGFCAYADITLAIKFLF-ERVE-GISRATIIDLDAHQGNGHERDFMGDKRVY 199
Query: 205 FFSVH-RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPV 263
V+ RH YP D F + + + W D +YL + +
Sbjct: 200 IMDVYNRH----IYPG--DRFAK-----EAIRRKVELEWGTE---DEEYLEKVERNVRRS 245
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY---SVMLKKLMDFAQGKIVLALEGGYN 320
++ PD+++ +AG D GD LGG ++P G ++ +++ I++ GGY
Sbjct: 246 LQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVTSGGYQ 305
Query: 321 LGS---ISNSVL 329
+ I++S+L
Sbjct: 306 KRTARIIADSIL 317
Score = 64 (27.6 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
HP + + + N L+ + +++ A+EA +++LL VHT ++N +K
Sbjct: 35 HPFDAGKWGKVINFLKEEKLLSDGMLVEAREASEEDLLVVHTRRYLNELK 84
>TAIR|locus:2157111 [details] [associations]
symbol:HDA7 "histone deacetylase7" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
Genevestigator:Q9FH09 Uniprot:Q9FH09
Length = 409
Score = 201 (75.8 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 74/324 (22%), Positives = 141/324 (43%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKD-KNL 70
KRRV Y+ + + G P P RI+ N + + + R + +N + D +
Sbjct: 9 KRRVSYFYEPMIGDYYY--GVNQPTKPQRIRVTHNLILSYNL-HRHMEINHPDLADASDF 65
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLN---EGSS-----EAAYLAAGSVI 122
H+ ++N +K+++ + ++ L ++ +G + AG I
Sbjct: 66 EKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSI 125
Query: 123 EVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
A ++ E + AI G HH + D+A GF N+V +A LL ++L
Sbjct: 126 SAAAKLNRQEAD--IAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKS-----FKRVL 178
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
++ HG+ ++ F RV+ S H+ D G + GEG G Y++N P
Sbjct: 179 YIEIGFPHGDEVEEAFKDTDRVMTVSFHK--------VGDTGDISDYGEGKGQYYSLNAP 230
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLK 301
++G D ++ ++ + + P++I++ G D+ AGDP G ++ G+ L+
Sbjct: 231 LKDG-LDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQ 289
Query: 302 KLMDFAQGKIVLALEGGYNLGSIS 325
+ F ++L GGY L +++
Sbjct: 290 YVRSFNVPLMILG-GGGYTLPNVA 312
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 195 (73.7 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 64/210 (30%), Positives = 94/210 (44%)
Query: 116 LAAGSVIEVAERVAEG--ELNSAFAIVRPPG--HHAEPDEAMGFCLYNNVAVAASFLLNE 171
L A S I A ++ + E V G HH A GFC N+V ++ + L
Sbjct: 168 LTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSHAAGFCYVNDVVLSINIL--- 224
Query: 172 RPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEG 231
R LG + +D D+HHG+ + F +V S+HR++ G FYP G E
Sbjct: 225 RKNLG--SVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIG-FYPGT--GSLKSSREN 279
Query: 232 PGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRV 291
YNI P E G D+ L + I+ P+ +FGP I+I G D A D +
Sbjct: 280 T---YNI--PTEKG-LNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGLALDTHKEWNM 333
Query: 292 TPYGYSVMLKKLMD-FAQGKIVLALEGGYN 320
T GY + ++ F++ I+L GGY+
Sbjct: 334 TIKGYRDSIDWILSHFSEIPIMLLGGGGYS 363
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 195 (73.7 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 64/210 (30%), Positives = 94/210 (44%)
Query: 116 LAAGSVIEVAERVAEG--ELNSAFAIVRPPG--HHAEPDEAMGFCLYNNVAVAASFLLNE 171
L A S I A ++ + E V G HH A GFC N+V ++ + L
Sbjct: 168 LTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSHAAGFCYVNDVVLSINIL--- 224
Query: 172 RPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEG 231
R LG + +D D+HHG+ + F +V S+HR++ G FYP G E
Sbjct: 225 RKNLG--SVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIG-FYPGT--GSLKSSREN 279
Query: 232 PGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRV 291
YNI P E G D+ L + I+ P+ +FGP I+I G D A D +
Sbjct: 280 T---YNI--PTEKG-LNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGLALDTHKEWNM 333
Query: 292 TPYGYSVMLKKLMD-FAQGKIVLALEGGYN 320
T GY + ++ F++ I+L GGY+
Sbjct: 334 TIKGYRDSIDWILSHFSEIPIMLLGGGGYS 363
>SGD|S000006272 [details] [associations]
symbol:HOS1 "Class I histone deacetylase (HDAC) family
member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
GermOnline:YPR068C Uniprot:Q12214
Length = 470
Score = 192 (72.6 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 55/178 (30%), Positives = 89/178 (50%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HHA A GFC N+V + L+ + +NKI VD+D+HHG+ +K F ++
Sbjct: 210 HHAFKQRASGFCYINDVVL----LIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQ 265
Query: 205 FFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA-VWDHILLPV 263
SVH +E G F+P G + + + +N+P ++G C D +YL + I+ P+
Sbjct: 266 TISVHLYEPG-FFPGT--GSLSDSRKDKNV---VNIPLKHG-CDD-NYLELIASKIVNPL 317
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM-DFAQGKIVLALEGGYN 320
+ P+ +II G D GD ++T G S ++ +M + + I L GGYN
Sbjct: 318 IERHEPEALIIECGGDGLLGDRFNEWQLTIRGLSRIIINIMKSYPRAHIFLLGGGGYN 375
>UNIPROTKB|B4DQE7 [details] [associations]
symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
deacetylase activity" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
Ensembl:ENST00000429103 Uniprot:B4DQE7
Length = 182
Score = 162 (62.1 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 39/130 (30%), Positives = 65/130 (50%)
Query: 207 SVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKD 266
S+H+ G F+P D + +G G G Y++NVP ++G D Y + + +L V +
Sbjct: 4 SLHKFSPG-FFPGTGD--VSDVGLGKGRYYSVNVPIQDG-IQDEKYYQICESVLKEVYQA 59
Query: 267 FGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISN 326
F P +++ G D AGDP+ +TP G LK ++ + ++L GGYNL + +
Sbjct: 60 FNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGGYNLANTAR 118
Query: 327 SVLACMNVLL 336
V+L
Sbjct: 119 CWTYLTGVIL 128
>TIGR_CMR|SPO_2177 [details] [associations]
symbol:SPO_2177 "acetoin utilization protein AcuC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
Uniprot:Q5LRF3
Length = 368
Score = 181 (68.8 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 72/299 (24%), Positives = 120/299 (40%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
G HP R+ + + +A G + A+ L + HT +++ ++ ++Q
Sbjct: 14 GAVHPLAIPRVSTVIDLCRAMGWFAPGQYRTSPRARPAALRAFHTPDYIAALQQAEAEQA 73
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG--HHAE 148
S R L ++ N +E Y + + AE + + P G HH
Sbjct: 74 VSEETRARHGLGTLP-NPVFAEM-YRRPATAAGGSLLAAE-LVARGHRVFNPGGGTHHGF 130
Query: 149 PDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSV 208
D A GFC N+ +A L +R LG ++ VD D HH + F V S+
Sbjct: 131 ADRAGGFCYLNDPVLA--ILALQR--LGCARVAYVDIDAHHCDGVASAFQGSQTVRMISI 186
Query: 209 HRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFG 268
H F A +D + G N+ V + D+ Y + D ++LP F
Sbjct: 187 HEARRWPFTGALED-------DAGGAALNLPVARD---LNDSAYALILDRLILPAVAGFR 236
Query: 269 PDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNS 327
PD +++ G DA A DPL ++ + ++ L +VL GGYN S++ +
Sbjct: 237 PDAVVLQCGADAVAEDPLSRLALSNCAHRDTVRALAALCPRLLVLG-GGGYNPWSVARA 294
>UNIPROTKB|F1RPM1 [details] [associations]
symbol:LOC100625846 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
Length = 142
Score = 160 (61.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 207 SVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKD 266
S+H+ G F+P D + +G G G Y++NVP ++G D Y + + +L V
Sbjct: 4 SLHKFSPG-FFPGTGD--VSDVGLGKGRYYSVNVPIQDG-IQDEKYYHICESVLKEVYIA 59
Query: 267 FGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALE-GGYNLGSIS 325
F P +++ G D AGDP+ +TP G LK ++ + ++L E GGYNL + +
Sbjct: 60 FNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTA 119
Query: 326 NSVLACMNVLL 336
V+L
Sbjct: 120 RCWTYLTGVIL 130
>UNIPROTKB|A6NDI8 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005881 "cytoplasmic
microtubule" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070846 "Hsp90 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0000209 GO:GO:0005881 GO:GO:0007026 GO:GO:0071218
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 EMBL:AF196971
GO:GO:0004407 GO:GO:0042903 HGNC:HGNC:14064 ChiTaRS:HDAC6
GO:GO:0070846 IPI:IPI00941641 SMR:A6NDI8 STRING:A6NDI8
Ensembl:ENST00000376610 Ensembl:ENST00000376643
HOGENOM:HOG000198256 HOVERGEN:HBG099245 Uniprot:A6NDI8
Length = 210
Score = 158 (60.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 38/125 (30%), Positives = 67/125 (53%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH+
Sbjct: 87 GLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHS 146
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+++L++ R +A +S+YL+ S A LA+GSV+ + + V E+ +
Sbjct: 147 LEYIDLMETTQYMNEGELRV-LADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRN 205
Query: 136 AFAIV 140
AI+
Sbjct: 206 GMAII 210
>SGD|S000006037 [details] [associations]
symbol:HOS3 "Trichostatin A-insensitive homodimeric histone
deacetylase (HDAC)" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000083 "regulation of transcription involved in
G1/S phase of mitotic cell cycle" evidence=IGI;IPI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005935 "cellular bud neck"
evidence=IDA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] SGD:S000006037 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0005935 GO:GO:0045944
GO:GO:0006351 EMBL:BK006949 EMBL:U43503 GO:GO:0070932 GO:GO:0000083
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 PIR:S62006
RefSeq:NP_015209.1 ProteinModelPortal:Q02959 DIP:DIP-8047N
IntAct:Q02959 MINT:MINT-2781063 STRING:Q02959 PaxDb:Q02959
PeptideAtlas:Q02959 EnsemblFungi:YPL116W GeneID:855987
KEGG:sce:YPL116W CYGD:YPL116w HOGENOM:HOG000246666 KO:K11484
OMA:AAITMYP OrthoDB:EOG4BZR9V NextBio:980834 Genevestigator:Q02959
GermOnline:YPL116W Uniprot:Q02959
Length = 697
Score = 160 (61.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 46/152 (30%), Positives = 71/152 (46%)
Query: 104 IYLNEGSSEAAYLAAGSVIEVAERVAEGEL-----NSAFAIVRPPGHHAEPDEAMGFCLY 158
IYL+ + +A G++ + + +G N AF +RPPGHH GFCL
Sbjct: 149 IYLSSKTIKALQGTIGAIETGVDSIFKGPSAEHISNRAFVAIRPPGHHCHYGTPSGFCLL 208
Query: 159 NNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYP 218
NN VA + + + ++++D+D+HHG+ TQ + WK R F E ++
Sbjct: 209 NNAHVAIEYAYDT---YNVTHVVVLDFDLHHGDGTQDICWK--RAGFKPEEEPEDSSY-- 261
Query: 219 ANDDGFYTMIGEGPGLGY----NIN-VPWENG 245
D F E P +GY +IN P E+G
Sbjct: 262 ---DDFGKKFAEFPKVGYFSMHDINSFPTESG 290
Score = 71 (30.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 271 IIIISAGFDAAAGDPLGGCR----VTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLG 322
+++ISAGFDA+ + R V Y+ K + AQ GK++ +EGGY+
Sbjct: 362 LVVISAGFDASEFEQTSMQRHSVNVPTSFYTTFTKDALKLAQMHCHGKVLSLMEGGYSDK 421
Query: 323 SISNSVLA 330
+I + V A
Sbjct: 422 AICSGVFA 429
>UNIPROTKB|B5MCV5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00879737
ProteinModelPortal:B5MCV5 SMR:B5MCV5 STRING:B5MCV5
Ensembl:ENST00000405478 BindingDB:B5MCV5 ArrayExpress:B5MCV5
Bgee:B5MCV5 Uniprot:B5MCV5
Length = 204
Score = 154 (59.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 49/180 (27%), Positives = 85/180 (47%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
HP + + + N L+ + +++ A+EA +++LL VHT ++N +K + +
Sbjct: 7 HPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITE 66
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEA 152
+ N + + G+++ A ++A + +AI G HH D
Sbjct: 67 IPPVIFLPNFLVQRKVLRPLRTQTGGTIM--AGKLA---VERGWAINVGGGFHHCSSDRG 121
Query: 153 MGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVH-RH 211
GFC Y ++ +A FL ER E GI++ I+D D H GN ++ F D RV V+ RH
Sbjct: 122 GGFCAYADITLAIKFLF-ERVE-GISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRH 179
>UNIPROTKB|H0YHJ5 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000547259 Uniprot:H0YHJ5
Length = 110
Score = 151 (58.2 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 32/72 (44%), Positives = 50/72 (69%)
Query: 270 DIIIISAGFDAAAGDP--LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNS 327
D++++SAGFDAA G P LGG V+ + M ++LM+ A G +VLALEGG++L +I ++
Sbjct: 2 DLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDA 61
Query: 328 VLACMNVLLEDK 339
AC+ LL ++
Sbjct: 62 SEACVAALLGNR 73
>CGD|CAL0004270 [details] [associations]
symbol:HOS3 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005935
"cellular bud neck" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=IEA] CGD:CAL0004270 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11484
RefSeq:XP_720292.1 RefSeq:XP_720522.1 ProteinModelPortal:Q5AF34
GeneID:3637886 GeneID:3638131 KEGG:cal:CaO19.10288
KEGG:cal:CaO19.2772 Uniprot:Q5AF34
Length = 713
Score = 144 (55.7 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
N AF ++RPPGHH+ GFCL NNV + + + G+ I+D D+HHG+ +
Sbjct: 304 NLAFVVIRPPGHHSHACLPSGFCLLNNVQIGIEYAFEQ---YGVTHCAILDIDLHHGDGS 360
Query: 194 QKMFWK 199
Q + W+
Sbjct: 361 QDICWE 366
Score = 81 (33.6 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 267 FGPDIIIISAGFDAAAGD-PL---GGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGG 318
F P +I ISAGFDA+ + P G V YS K ++ A+ GK++ LEGG
Sbjct: 517 FKP-LIAISAGFDASQYENPQMQRHGINVPTSFYSTFTKDVVKLAKIHTNGKVLSFLEGG 575
Query: 319 YNLGSISNSVLA 330
Y+ G++S + +
Sbjct: 576 YSDGALSTGIFS 587
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 524 YRITLEQFNDVLLQENVYSDDVSSP 548
Y L ++N LL+ ++YS ++ P
Sbjct: 487 YLDNLGKYNKYLLKPHLYSQPLTKP 511
>UNIPROTKB|Q5AF34 [details] [associations]
symbol:HOS3 "Likely histone deacetylase Hos3p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0004270 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11484
RefSeq:XP_720292.1 RefSeq:XP_720522.1 ProteinModelPortal:Q5AF34
GeneID:3637886 GeneID:3638131 KEGG:cal:CaO19.10288
KEGG:cal:CaO19.2772 Uniprot:Q5AF34
Length = 713
Score = 144 (55.7 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
N AF ++RPPGHH+ GFCL NNV + + + G+ I+D D+HHG+ +
Sbjct: 304 NLAFVVIRPPGHHSHACLPSGFCLLNNVQIGIEYAFEQ---YGVTHCAILDIDLHHGDGS 360
Query: 194 QKMFWK 199
Q + W+
Sbjct: 361 QDICWE 366
Score = 81 (33.6 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 267 FGPDIIIISAGFDAAAGD-PL---GGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGG 318
F P +I ISAGFDA+ + P G V YS K ++ A+ GK++ LEGG
Sbjct: 517 FKP-LIAISAGFDASQYENPQMQRHGINVPTSFYSTFTKDVVKLAKIHTNGKVLSFLEGG 575
Query: 319 YNLGSISNSVLA 330
Y+ G++S + +
Sbjct: 576 YSDGALSTGIFS 587
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 524 YRITLEQFNDVLLQENVYSDDVSSP 548
Y L ++N LL+ ++YS ++ P
Sbjct: 487 YLDNLGKYNKYLLKPHLYSQPLTKP 511
>TAIR|locus:2180657 [details] [associations]
symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
Uniprot:Q944K3
Length = 387
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 50/178 (28%), Positives = 84/178 (47%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH + GFC + ++++ F L I++++I+D D H GN + D RV
Sbjct: 200 HHCTAERGGGFCAFADISLCIHFAFLR---LRISRVMIIDLDAHQGNGHETDLGDDNRVY 256
Query: 205 FFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVA 264
++ E YP D I + + V +G D +YL D L +
Sbjct: 257 ILDMYNPEI---YPF-DYRARRFIDQ------KVEVM--SGTTTD-EYLRKLDEALEVAS 303
Query: 265 KDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK---IVLALEGGY 319
++F P+++I +AG D GDPLG +++P G + +K+ FA+ K +V+ GGY
Sbjct: 304 RNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGY 361
Score = 118 (46.6 bits), Expect = 0.00076, P = 0.00076
Identities = 41/184 (22%), Positives = 81/184 (44%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
HP + ++ + L + G + ++ EA +LL VH+EN++N +K+ ++ +
Sbjct: 93 HPFDSSKWGRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITE 152
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEA 152
+A N + + G+++ A ++A +AI G HH +
Sbjct: 153 VAPVAFFPNFLVQQKVLYPFRKQVGGTIL--AAKLAT---ERGWAINIGGGFHHCTAERG 207
Query: 153 MGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHE 212
GFC + ++++ F L I++++I+D D H GN + D RV ++ E
Sbjct: 208 GGFCAFADISLCIHFAFLR---LRISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPE 264
Query: 213 FGTF 216
F
Sbjct: 265 IYPF 268
>UNIPROTKB|B5MCQ6 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00877858
ProteinModelPortal:B5MCQ6 STRING:B5MCQ6 Ensembl:ENST00000402271
ArrayExpress:B5MCQ6 Bgee:B5MCQ6 Uniprot:B5MCQ6
Length = 268
Score = 137 (53.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 47/168 (27%), Positives = 77/168 (45%)
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVH-RHEFGTFYPANDDGFYTM 227
L ER E GI++ I+D D H GN ++ F D RV V+ RH YP D F
Sbjct: 86 LFERVE-GISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRH----IYPG--DRFAKQ 138
Query: 228 IGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLG 287
+ + + W D +YL + + ++ PD+++ +AG D GD LG
Sbjct: 139 -----AIRRKVELEWGTE---DDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLG 190
Query: 288 GCRVTPYGYSVMLKKLMDFAQGK---IVLALEGGYNLGS---ISNSVL 329
G ++P G + + +G+ I++ GGY + I++S+L
Sbjct: 191 GLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSIL 238
Score = 66 (28.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
HP + + + N L+ + +++ A+EA +++LL VHT ++N +K
Sbjct: 35 HPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK 84
>UNIPROTKB|E7EW22 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00940139
ProteinModelPortal:E7EW22 SMR:E7EW22 Ensembl:ENST00000436675
ArrayExpress:E7EW22 Bgee:E7EW22 Uniprot:E7EW22
Length = 185
Score = 144 (55.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 45/156 (28%), Positives = 74/156 (47%)
Query: 38 PNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI 97
P R + + ++A + ++ ++ K A + + + HT+ ++ ++ +S + D D I
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSI 94
Query: 98 ASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGF 155
L EG + A G+ I A+ + +G AI G HHA+ DEA GF
Sbjct: 95 EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGF 152
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
C Y N AV L + E +IL VD D+HHG+
Sbjct: 153 C-YLNDAVLGILRLRRKFE----RILYVDLDLHHGD 183
>UNIPROTKB|G4N4X5 [details] [associations]
symbol:MGG_06043 "Histone deacetylase HOS3" species:242507
"Magnaporthe oryzae 70-15" [GO:0004407 "histone deacetylase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005935 "cellular bud
neck" evidence=ISS] [GO:0016575 "histone deacetylation"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0005935 EMBL:CM001233 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11484 RefSeq:XP_003711894.1 EnsemblFungi:MGG_06043T0
GeneID:2683932 KEGG:mgr:MGG_06043 Uniprot:G4N4X5
Length = 1141
Score = 147 (56.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 104 IYLNEGSSEAAYLAAGSVIEVAERV--AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
+YL S +A + G V E + V E AF +RPPGHH GFC NNV
Sbjct: 298 LYLCSESLDALEGSLGGVCEAVDAVFTPENPAKRAFVAIRPPGHHCSASFPSGFCWVNNV 357
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWK 199
V +++ G+ I+D+D+HHG+ +Q + W+
Sbjct: 358 HVG---IMHGILSHGLTHAAIIDFDLHHGDGSQAIAWQ 392
Score = 72 (30.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 272 IIISAGFDAAAGDPLGGCR----VTPYGYSVMLKKLMDFA-------QGKIVLALEGGYN 320
I +SAGFDA+ + G R V Y+ + + ++ A +G+++ LEGGY+
Sbjct: 501 IFLSAGFDASEWEGAGMQRHKVNVPTEFYARLTRDVVKIAAEEETSVEGRVISVLEGGYS 560
Query: 321 LGSISNSVLACMNVLLEDKPV 341
++ + +L+ ++ L D PV
Sbjct: 561 DRALCSGILSHVSGLAGDDPV 581
>ASPGD|ASPL0000069638 [details] [associations]
symbol:hosB species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001304 EMBL:AACD01000117 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K11484
OrthoDB:EOG4BZR9V RefSeq:XP_664623.1 ProteinModelPortal:Q5AXG1
EnsemblFungi:CADANIAT00000457 GeneID:2870089 KEGG:ani:AN7019.2
HOGENOM:HOG000170608 OMA:DLYLCSE Uniprot:Q5AXG1
Length = 1125
Score = 149 (57.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 104 IYLNEGSSEAAYLAAGSVIEVAERV-AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVA 162
+YL S +A A G V E + V + G AF +RPPGHH GFC NNV
Sbjct: 325 LYLCSESLDAFEGALGGVCEGIDAVFSPGPTKRAFVCIRPPGHHCSSGNPSGFCWINNVH 384
Query: 163 VAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWK 199
V S+ + I+D+D+HHG+ +Q + W+
Sbjct: 385 VGISYAAMTHD---LTHAAILDFDLHHGDGSQDIAWE 418
Score = 68 (29.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 272 IIISAGFDAAAGDPLGGCR----VTPYGYSVMLKKLMDFAQ-------GKIVLALEGGYN 320
I ISAGFDA+ + +G R V Y+ ++ A+ G+IV LEGGY+
Sbjct: 527 IFISAGFDASEWEGMGMQRHKVNVPTEFYARFTADVVRMAEEEGLGVDGRIVSVLEGGYS 586
Query: 321 LGSISNSVLACMNVLLEDKPV 341
+++ VL+ ++ L + K V
Sbjct: 587 NRALTTGVLSHLSGLGDTKGV 607
>UNIPROTKB|C9JEC8 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 IPI:IPI00879107 ProteinModelPortal:C9JEC8
SMR:C9JEC8 STRING:C9JEC8 Ensembl:ENST00000455904 BindingDB:C9JEC8
ArrayExpress:C9JEC8 Bgee:C9JEC8 Uniprot:C9JEC8
Length = 166
Score = 133 (51.9 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 43/165 (26%), Positives = 78/165 (47%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
HP + + + N L+ + +++ A+EA +++LL VHT ++N +K + +
Sbjct: 7 HPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITE 66
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEA 152
+ N + + G+++ A ++A + +AI G HH D
Sbjct: 67 IPPVIFLPNFLVQRKVLRPLRTQTGGTIM--AGKLA---VERGWAINVGGGFHHCSSDRG 121
Query: 153 MGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMF 197
GFC Y ++ +A FL ER E GI++ I+D D H GN ++ F
Sbjct: 122 GGFCAYADITLAIKFLF-ERVE-GISRATIIDLDAHQGNGHERDF 164
>UNIPROTKB|Q9KQF6 [details] [associations]
symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
Uniprot:Q9KQF6
Length = 306
Score = 149 (57.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 42/115 (36%), Positives = 60/115 (52%)
Query: 130 EGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
E L S AI G HHA D GFCL+N++A+AA F L+ P ++K+LI+D DVH
Sbjct: 109 EQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALS-LPS--VDKVLIIDSDVH 165
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHE-FGTFYPAN--DDGFYTMIGEGPGLGYNINV 240
HG+ T + + ++ S H + F PA+ D G+ G+ L I V
Sbjct: 166 HGDGTATLCAERDEIITLSFHCDKNFPARKPASSMDVGYANQTGDEEFLSTFIQV 220
>TIGR_CMR|VC_2042 [details] [associations]
symbol:VC_2042 "histone deacetylase/AcuC/AphA family
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
ProtClustDB:CLSK874650 Uniprot:Q9KQF6
Length = 306
Score = 149 (57.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 42/115 (36%), Positives = 60/115 (52%)
Query: 130 EGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
E L S AI G HHA D GFCL+N++A+AA F L+ P ++K+LI+D DVH
Sbjct: 109 EQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALS-LPS--VDKVLIIDSDVH 165
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHE-FGTFYPAN--DDGFYTMIGEGPGLGYNINV 240
HG+ T + + ++ S H + F PA+ D G+ G+ L I V
Sbjct: 166 HGDGTATLCAERDEIITLSFHCDKNFPARKPASSMDVGYANQTGDEEFLSTFIQV 220
>UNIPROTKB|H0YIE2 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000551602 Uniprot:H0YIE2
Length = 181
Score = 118 (46.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 30 DGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNL 81
D HPE+ RI++IW++LQ G+ +C L ++A + L SVH+E HV L
Sbjct: 5 DNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLL 56
Score = 58 (25.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGH 145
SS AA AAGSV ++A +VA EL +++ GH
Sbjct: 102 SSNAARWAAGSVTDLAFKVASRELKGLL-LLQLSGH 136
>FB|FBgn0051119 [details] [associations]
symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
Length = 343
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 52/192 (27%), Positives = 87/192 (45%)
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HH GFC Y ++++ L + P + +I+IVD D H GN ++ F V
Sbjct: 158 HHCCSYRGGGFCPYADISLLIVRLFEQEP-FRVRRIMIVDLDAHQGNGHERDFNNVAAVY 216
Query: 205 FFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVA 264
F ++ + F YP + + E + E+G YL L+
Sbjct: 217 IFDMY-NAF--VYPRDH-----VAKESIRCAVELRNYTEDGF-----YLRQLKRCLMQSL 263
Query: 265 KDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM--DF-AQG-KIVLALEGGY- 319
+F PD+++ +AG D GDPLG ++ G + +L+ F A G +V+ L GGY
Sbjct: 264 AEFRPDMVVYNAGTDVLEGDPLGNLAISAEGV-IERDRLVFSTFRALGIPVVMLLSGGYL 322
Query: 320 --NLGSISNSVL 329
+ G I++S++
Sbjct: 323 KASAGVITDSIV 334
>WB|WBGene00007953 [details] [associations]
symbol:hda-11 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/215 (28%), Positives = 91/215 (42%)
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
L AG + +A +A L +AI G HHA GFC Y ++ +A L +++
Sbjct: 117 LQAGGTV-LAANLA---LKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKK-- 170
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF-YPANDDGFYTMIGEGPG 233
I ++VD D H GN + F +P V F V F + YP +D I
Sbjct: 171 -AIANAIVVDLDAHQGNGHARDFADNPNVFVFDV----FNPYVYP-HDREARQFINRA-- 222
Query: 234 LGYNINVPWENGRCGDADYLAVWD----HILLPVAKDFGP--DIIIISAGFDAAAGDPLG 287
++V NG D YL+ L+ K P D I+ +AG D GDPLG
Sbjct: 223 ----VHV---NGHTTDTSYLSELRKQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGDPLG 275
Query: 288 GCRVTPYGYSVMLKKLMDFAQGK---IVLALEGGY 319
+++P + + + A+ K I + GGY
Sbjct: 276 AMKLSPQCIIARDEVVFNLAKSKGIPICMVTSGGY 310
>UNIPROTKB|Q18477 [details] [associations]
symbol:hda-11 "Protein HDA-11" species:6239 "Caenorhabditis
elegans" [GO:0006476 "protein deacetylation" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/215 (28%), Positives = 91/215 (42%)
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
L AG + +A +A L +AI G HHA GFC Y ++ +A L +++
Sbjct: 117 LQAGGTV-LAANLA---LKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKK-- 170
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF-YPANDDGFYTMIGEGPG 233
I ++VD D H GN + F +P V F V F + YP +D I
Sbjct: 171 -AIANAIVVDLDAHQGNGHARDFADNPNVFVFDV----FNPYVYP-HDREARQFINRA-- 222
Query: 234 LGYNINVPWENGRCGDADYLAVWD----HILLPVAKDFGP--DIIIISAGFDAAAGDPLG 287
++V NG D YL+ L+ K P D I+ +AG D GDPLG
Sbjct: 223 ----VHV---NGHTTDTSYLSELRKQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGDPLG 275
Query: 288 GCRVTPYGYSVMLKKLMDFAQGK---IVLALEGGY 319
+++P + + + A+ K I + GGY
Sbjct: 276 AMKLSPQCIIARDEVVFNLAKSKGIPICMVTSGGY 310
>UNIPROTKB|F5GXM1 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 HGNC:HGNC:4852
ChiTaRS:HDAC1 EMBL:AL109945 IPI:IPI01010320
ProteinModelPortal:F5GXM1 SMR:F5GXM1 PRIDE:F5GXM1
Ensembl:ENST00000373541 UCSC:uc001bvc.1 ArrayExpress:F5GXM1
Bgee:F5GXM1 Uniprot:F5GXM1
Length = 289
Score = 135 (52.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 207 SVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKD 266
+V H++G ++P D IG G G Y +N P +G D Y A++ ++ V +
Sbjct: 2 TVSFHKYGEYFPGTGD--LRDIGAGKGKYYAVNYPLRDG-IDDESYEAIFKPVMSKVMEM 58
Query: 267 FGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSIS 325
F P +++ G D+ +GD LG +T G++ ++ + F ++L GGY + +++
Sbjct: 59 FQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVA 116
>UNIPROTKB|F5H5W4 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 InterPro:IPR024643
Pfam:PF12203 EMBL:AC017028 HGNC:HGNC:14063 EMBL:AC062017
IPI:IPI00892764 ProteinModelPortal:F5H5W4 SMR:F5H5W4
Ensembl:ENST00000541256 ArrayExpress:F5H5W4 Bgee:F5H5W4
Uniprot:F5H5W4
Length = 737
Score = 135 (52.6 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/95 (31%), Positives = 54/95 (56%)
Query: 16 GLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +V
Sbjct: 629 GLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTV 688
Query: 74 HTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL 106
H+E H L ++ ++ DS++ + L S+++
Sbjct: 689 HSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFV 721
>UNIPROTKB|C9J8F0 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00878343
ProteinModelPortal:C9J8F0 SMR:C9J8F0 STRING:C9J8F0 PRIDE:C9J8F0
Ensembl:ENST00000421523 BindingDB:C9J8F0 ArrayExpress:C9J8F0
Bgee:C9J8F0 Uniprot:C9J8F0
Length = 132
Score = 102 (41.0 bits), Expect = 0.00017, P = 0.00017
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 48 LQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN-SIYL 106
++A + ++ ++ K A + + + HT+ ++ ++ +S + D D I L
Sbjct: 6 IEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPA 65
Query: 107 NEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAA 165
EG + A G+ I A+ + +G AI G HHA+ DEA GFC Y N AV
Sbjct: 66 TEGIFDYAAAIGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGFC-YLNDAVLG 122
Query: 166 SFLLNERPE 174
L + E
Sbjct: 123 ILRLRRKFE 131
>UNIPROTKB|H3BM24 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
Ensembl:ENST00000425835 Bgee:H3BM24 Uniprot:H3BM24
Length = 161
Score = 110 (43.8 bits), Expect = 0.00027, P = 0.00027
Identities = 35/143 (24%), Positives = 62/143 (43%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
G HP P+RI+ N L G+ ++ + +A + + H++ ++ +++I
Sbjct: 16 GQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNM 75
Query: 91 DSRRDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HH 146
S + + N + +G E L+ G VA V + A+ G HH
Sbjct: 76 -SEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGG--SVAGAVKLNRQQTDMAVNWAGGLHH 132
Query: 147 AEPDEAMGFCLYNNVAVAASFLL 169
A+ EA GFC N++ +A LL
Sbjct: 133 AKKSEASGFCYVNDIVLAILELL 155
>UNIPROTKB|Q48DS3 [details] [associations]
symbol:PSPPH_4352 "Histone deacetylase family protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
ProtClustDB:CLSK909647 Uniprot:Q48DS3
Length = 305
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 111 SEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLL 169
SEA S + + AE L A G HHA D GFC++N++AV + +LL
Sbjct: 85 SEALARRTVSAVGGSLLTAEQALKHGMACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLL 144
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVH 209
++K+LI D DVH G+ T ++ + S+H
Sbjct: 145 QSGR---VDKVLIFDCDVHQGDGTARILADTEDAITVSLH 181
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 646 646 0.00094 120 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 216
No. of states in DFA: 630 (67 KB)
Total size of DFA: 383 KB (2187 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.86u 0.12s 54.98t Elapsed: 00:00:02
Total cpu time: 54.91u 0.12s 55.03t Elapsed: 00:00:02
Start: Mon May 20 21:15:43 2013 End: Mon May 20 21:15:45 2013
WARNINGS ISSUED: 1