BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006415
(646 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359491637|ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera]
gi|297733877|emb|CBI15124.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/652 (76%), Positives = 569/652 (87%), Gaps = 12/652 (1%)
Query: 1 MEVKSGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL 60
MEV S +G +RRVGL+YD+RMC+H T DGD HPENP+RI+AIW KL++AGIPQRCVV
Sbjct: 1 MEVNSEKGDR-RRRVGLVYDDRMCEHATADGDPHPENPDRIRAIWKKLESAGIPQRCVVF 59
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
NAKEA+DK++LSVH+ NHVNLIKNISSKQFDSRR+RIASK NSIY+NEGSSEAAYLAAGS
Sbjct: 60 NAKEAEDKHILSVHSNNHVNLIKNISSKQFDSRRNRIASKFNSIYMNEGSSEAAYLAAGS 119
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
VIEVAERVA+GEL+SAFAIVRPPGHHAE +E MGFCLYNNVA+A SFLLNERP+ I KI
Sbjct: 120 VIEVAERVAKGELSSAFAIVRPPGHHAEQNEPMGFCLYNNVAIATSFLLNERPD--IKKI 177
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
LIVDWDVHHGN TQKMFWKDPRVLFFSVHRHEFG+FYPAND+GFY M GEGPG GYNINV
Sbjct: 178 LIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEFGSFYPANDEGFYAMTGEGPGAGYNINV 237
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
PWENGRCGDADYLAVWDHIL+PVAKDF PDI+IISAGFDAA GDPLGGC VTPYGYSVML
Sbjct: 238 PWENGRCGDADYLAVWDHILIPVAKDFNPDIVIISAGFDAAIGDPLGGCHVTPYGYSVML 297
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAV 360
KKLM+F++GKI++ALEGGYNL S++NSVLAC+ VLLEDKP+AGSSEAYPFESTWRVIQAV
Sbjct: 298 KKLMEFSEGKIIMALEGGYNLVSLANSVLACVEVLLEDKPIAGSSEAYPFESTWRVIQAV 357
Query: 361 RKKLSAFWPTLADELPTKLTSLKAPPAH-MISSSDSEDED-----TKVETLEAVLQVALS 414
R++LSAFWPTLADELP KLTS KA P +++SSDSEDE + E LEAV+Q LS
Sbjct: 358 RQELSAFWPTLADELPKKLTSCKASPLQLLVASSDSEDESDIDLHIRAENLEAVVQDGLS 417
Query: 415 KLKVDDGHAELGMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSK 474
KLKVD+ +L +AT WRSELSK+DV+YASFGSNMWKSRFLCYIEGGQ+EGM+K CSGS
Sbjct: 418 KLKVDEDSHDL-VAT-WRSELSKIDVWYASFGSNMWKSRFLCYIEGGQLEGMEKRCSGSV 475
Query: 475 DRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDV 534
DRNPPKEI+WKT PH LFFG D S TWGPGGVAFLNPE + + +AY+CLYRITLEQFNDV
Sbjct: 476 DRNPPKEIMWKTVPHRLFFGRDHSSTWGPGGVAFLNPEENNQDRAYICLYRITLEQFNDV 535
Query: 535 LLQENVYSDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCS 594
LLQEN S D+SSPLFD LNS+A+K+++S+E K+GWY +V+YLGKE IPILT+TC
Sbjct: 536 LLQENASSYDISSPLFDLVALNSIADKQSISVE-FKSGWYRSVLYLGKECDIPILTLTCP 594
Query: 595 LSAVGKFKSGEFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
LS V FKSG+ P+ AP+ Y NT+I+GL EGKQLSEEEA AYI EASTK L
Sbjct: 595 LSDVEAFKSGDLPMSAPSKEYANTIIRGLTEGKQLSEEEAIAYIQEASTKPL 646
>gi|255547205|ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis]
gi|223546264|gb|EEF47766.1| histone deacetylase hda1, putative [Ricinus communis]
Length = 654
Score = 1002 bits (2591), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/654 (73%), Positives = 549/654 (83%), Gaps = 8/654 (1%)
Query: 1 MEVKSGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL 60
ME++S E ++ +RRVGLLYDERM KH+TPD D HPENPNRI AIWNKL A IPQRCVVL
Sbjct: 1 MEMESSERKSNQRRVGLLYDERMRKHHTPDDDNHPENPNRISAIWNKLLANSIPQRCVVL 60
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
NAKEA+DKNLL+VH++NHVNLI+NISSKQ++S+RD IASK NSIY N+GSSEAAYLAAGS
Sbjct: 61 NAKEAEDKNLLAVHSKNHVNLIRNISSKQYESQRDNIASKFNSIYFNQGSSEAAYLAAGS 120
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
V+EVAERVA+GEL+SA AIVRPPGHHAE D+AMGFCL+NNVAVAASFLL+E PELGI KI
Sbjct: 121 VVEVAERVAKGELDSAAAIVRPPGHHAEHDKAMGFCLFNNVAVAASFLLDENPELGIKKI 180
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
LIVDWDVHHGN TQK FWKDPRVLFFSVHRHEFG+FYPANDDGFYTMIGEGPG GYNINV
Sbjct: 181 LIVDWDVHHGNGTQKTFWKDPRVLFFSVHRHEFGSFYPANDDGFYTMIGEGPGAGYNINV 240
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
PWENGRCGDADYLAVWDHIL+PVAK+F PD+IIISAGFDAA GDPLGGCR+TPYGYSVML
Sbjct: 241 PWENGRCGDADYLAVWDHILIPVAKEFNPDMIIISAGFDAAVGDPLGGCRITPYGYSVML 300
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAV 360
KKLMDFA GKIVLALEGGYNL SI+NS ACM VLLE KP+AGSSEAYPFESTWRVIQAV
Sbjct: 301 KKLMDFANGKIVLALEGGYNLESIANSFFACMEVLLESKPIAGSSEAYPFESTWRVIQAV 360
Query: 361 RKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSED-------EDTKVETLEAVLQVAL 413
RKKLS +W TLADELP KLTS K PPAH++ SS + + + + L L
Sbjct: 361 RKKLSGYWATLADELPLKLTSQKGPPAHLLISSSDSEDEDDRTLNNVSLNMVAVELVEPL 420
Query: 414 SKLKVDDGHAELGM-ATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSG 472
SKLKV++G+ +L + PWRSELSK +++YA++GSNMWKSRFLCYI+GGQVEGM+KPCSG
Sbjct: 421 SKLKVEEGYDQLATKSIPWRSELSKTEIWYATYGSNMWKSRFLCYIQGGQVEGMKKPCSG 480
Query: 473 SKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFN 532
S DR PPK+ILW+ FPH LFFG +S+ TWG GGVAF++P K Y C+YRITLEQF
Sbjct: 481 SMDRKPPKDILWRIFPHRLFFGRESTLTWGLGGVAFVHPASSADEKTYFCMYRITLEQFV 540
Query: 533 DVLLQENVYSDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMT 592
DVLLQENV + ++SSP+FD+ L SV N+ ++SLE K GWYHNVVYLG+E IPILTMT
Sbjct: 541 DVLLQENVPNYNMSSPVFDSAALQSVINQGSMSLEVFKRGWYHNVVYLGQEQNIPILTMT 600
Query: 593 CSLSAVGKFKSGEFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
C S V FKSGE PL AP+ Y NTLIKGLVEG +LSEE+A YI EAS K L
Sbjct: 601 CPPSNVESFKSGELPLCAPSKEYANTLIKGLVEGGKLSEEQAIDYIKEASIKPL 654
>gi|224079409|ref|XP_002305854.1| histone deacetylase [Populus trichocarpa]
gi|222848818|gb|EEE86365.1| histone deacetylase [Populus trichocarpa]
Length = 646
Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/641 (74%), Positives = 542/641 (84%), Gaps = 6/641 (0%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R VG++YDE+MCKH+TPDGD HPENPNRI+ IWNKL A IPQRCVVL+ KEA+DK L+
Sbjct: 5 ERLVGIIYDEKMCKHHTPDGDSHPENPNRIRVIWNKLLANNIPQRCVVLSGKEAEDKYLM 64
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
+VH+ENHVNLI+NISSKQFDSRR+RIASKLNSIY NEGSSEAAY AAGSV+E+AER+A+G
Sbjct: 65 AVHSENHVNLIRNISSKQFDSRRNRIASKLNSIYFNEGSSEAAYHAAGSVLELAERIAKG 124
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+LNS AIVRPPGHHAE DEAMGFCL+NNVAVAASFLL+ERPELG+ KILIVDWDVHHGN
Sbjct: 125 DLNSGAAIVRPPGHHAEYDEAMGFCLFNNVAVAASFLLDERPELGVKKILIVDWDVHHGN 184
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQK FW D RVLFFSVHRHEFG+FYP NDDGFYTMIGEGPG GYNINVPWE+ RCGDAD
Sbjct: 185 GTQKTFWNDSRVLFFSVHRHEFGSFYPGNDDGFYTMIGEGPGTGYNINVPWEHARCGDAD 244
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLAVWDHIL+PVAK F PD+II+SAGFDAA GDPLGGC VTPYGYSVMLKKLMDFAQGKI
Sbjct: 245 YLAVWDHILIPVAKKFDPDMIIVSAGFDAAVGDPLGGCCVTPYGYSVMLKKLMDFAQGKI 304
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+LALEGGYNL SI+NS LACM VLLEDKPV+GS EAYPFESTWRVIQAVRKKLS +WP L
Sbjct: 305 MLALEGGYNLDSIANSFLACMKVLLEDKPVSGSVEAYPFESTWRVIQAVRKKLSPYWPAL 364
Query: 372 ADELPTKLTSLKAPPAH-MISSSDSEDEDTKVETL--EAVLQVA--LSKLKVDDGHAELG 426
ADELP KLT AP H +IS+SDSE ED K + + E V +V SKLKV+D ++
Sbjct: 365 ADELPLKLTIQNAPHPHILISNSDSEGEDEKAQNIVSEIVQEVMEPFSKLKVEDNQDQVA 424
Query: 427 M-ATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWK 485
+T WRSELSK+D++YASFGSNMWK RFLCYIEGGQV+GM+KPC+GS D+N PKEILWK
Sbjct: 425 TSSTSWRSELSKIDIWYASFGSNMWKPRFLCYIEGGQVDGMKKPCTGSMDKNLPKEILWK 484
Query: 486 TFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENVYSDDV 545
FPH L+FG DS+ TWGPGGVAFL+P+ K Y+CLY+ITLEQFNDVLLQENV S +
Sbjct: 485 NFPHRLYFGRDSTRTWGPGGVAFLHPDNSVGEKTYMCLYKITLEQFNDVLLQENVPSYQM 544
Query: 546 SSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGE 605
+SP+FD L S+ NK ++SLE K+GWY NVVYLG E IPILTMTCS+S FK GE
Sbjct: 545 NSPVFDLAALQSIKNKGSISLEVFKSGWYRNVVYLGNERDIPILTMTCSISDAESFKLGE 604
Query: 606 FPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
FPLR P+ Y NTL+KGLVE QLSEEEA AYI EAS+K L
Sbjct: 605 FPLRRPSKEYANTLVKGLVESGQLSEEEAIAYIEEASSKPL 645
>gi|356511847|ref|XP_003524633.1| PREDICTED: histone deacetylase 5-like [Glycine max]
Length = 656
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/640 (72%), Positives = 532/640 (83%), Gaps = 11/640 (1%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+RRVGLLYDERMCKH+TPD + HPE PNRI+AIWNKLQ+ G+PQRCV+L AKEA+DK+LL
Sbjct: 16 QRRVGLLYDERMCKHHTPDDEDHPETPNRIRAIWNKLQSTGVPQRCVILEAKEAEDKHLL 75
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VH+ENHVNLIKNISSKQF+SRR +IASKL+SIY NEGSSEAAYLAAGS +EV ERVA
Sbjct: 76 LVHSENHVNLIKNISSKQFNSRRHKIASKLDSIYFNEGSSEAAYLAAGSAVEVVERVASR 135
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
EL+SA AIVRPPGHHAE +EAMGFCL+NNVAVAA +LL+ERPELG+ KILIVDWDVHHGN
Sbjct: 136 ELDSAVAIVRPPGHHAEQNEAMGFCLFNNVAVAARYLLDERPELGVKKILIVDWDVHHGN 195
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQKMFW D RVLFFSVHRHEFG+FYPANDDGFYTMIGEG G GYNINVPWENGRCGDAD
Sbjct: 196 GTQKMFWNDSRVLFFSVHRHEFGSFYPANDDGFYTMIGEGAGAGYNINVPWENGRCGDAD 255
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
Y AVWDHILLPVAK+F PDIII+SAGFDAA GDPLGGCRVTP+GYSV+L+KLM+FA+G+I
Sbjct: 256 YFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLEKLMNFAEGRI 315
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
VL LEGGYNL SI+ S+ AC+ VLLEDKPV GSSEAYPFESTWRVI+AV +LS FWPTL
Sbjct: 316 VLILEGGYNLDSIAKSMHACLEVLLEDKPVIGSSEAYPFESTWRVIKAVLLELSPFWPTL 375
Query: 372 ADELPTKLTSLKAPPAH-MISSSDSEDEDTK--------VETLEAVLQVALSKLKVDDGH 422
A ELP KL S APP H ++SSSDSE ED K VE LE V++ LSKLKV D
Sbjct: 376 ACELPQKLISQMAPPPHTLVSSSDSEAEDDKGAPSSENFVELLEDVIK-PLSKLKV-DAD 433
Query: 423 AELGMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEI 482
+ +++ WRSELS V ++YAS+GSNMWK+R CY+ GGQVEGMQK CSGS +R PKEI
Sbjct: 434 EDTDVSSTWRSELSNVYIWYASYGSNMWKARLNCYLAGGQVEGMQKGCSGSVNRTLPKEI 493
Query: 483 LWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENVYS 542
LWKTFP H+FFG DSSH+WG GGVAFLNPE +H Y+CLY+I+LEQFND+L QEN S
Sbjct: 494 LWKTFPCHIFFGRDSSHSWGMGGVAFLNPEKSFQHNTYMCLYKISLEQFNDILFQENGLS 553
Query: 543 DDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFK 602
D SPLFD LN+++ K+ SLE +K WY NVVYLGKE IP++TMTCSL + +FK
Sbjct: 554 LDAGSPLFDITTLNAISYKEFHSLEVVKGAWYGNVVYLGKELDIPVITMTCSLLDIERFK 613
Query: 603 SGEFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEAS 642
SG+ PLRAP Y NTLIKGLV+G+QLSE EA AYI A+
Sbjct: 614 SGKLPLRAPNKAYANTLIKGLVDGEQLSEVEAIAYIEGAA 653
>gi|356564935|ref|XP_003550702.1| PREDICTED: histone deacetylase 5-like [Glycine max]
Length = 652
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/655 (70%), Positives = 534/655 (81%), Gaps = 12/655 (1%)
Query: 1 MEVKSGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL 60
ME ++ +RRVGLLYDE MCKH+TPD + HPENPNRI+AIWN+LQ+AG+ QRCV+L
Sbjct: 1 MERENENSVNAQRRVGLLYDETMCKHHTPDDEDHPENPNRIRAIWNRLQSAGVLQRCVIL 60
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
AKEA+DK+LL VH+ NHVNLIKNISSKQF+SRR +IASKL SIY NEGSSEAAYLAAGS
Sbjct: 61 EAKEAEDKHLLLVHSINHVNLIKNISSKQFNSRRHKIASKLGSIYFNEGSSEAAYLAAGS 120
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
+EV +RVA EL+SA AIVRPPGHHAE EAMGFCL+NNVAVAA +LL+ERPELG+ KI
Sbjct: 121 AVEVVKRVASRELDSAVAIVRPPGHHAEQQEAMGFCLFNNVAVAARYLLDERPELGVKKI 180
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
LIVDWDVHHGN TQKMFW D RVLFFSVHRHEFG+FYPANDDGFYTMIGEG G GYNINV
Sbjct: 181 LIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPANDDGFYTMIGEGAGAGYNINV 240
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
PWENGRCGDADY AVWDHILLPVAK+F PDIII+SAGFDAA GDPLGGC VTP+GYSV+L
Sbjct: 241 PWENGRCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCLVTPFGYSVLL 300
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAV 360
+KLM+FA+G+IVL LEGGYNL SIS S+ AC+ VLL D+PV GS+EAYPFESTWRVIQAV
Sbjct: 301 EKLMNFAEGRIVLILEGGYNLDSISKSMHACLEVLLADQPVIGSAEAYPFESTWRVIQAV 360
Query: 361 RKKLSAFWPTLADELPTKLTSLKAPPAH-MISSSDSEDEDTK--------VETLEAVLQV 411
R+ LS FWPTLA ELP KL S APP + +ISSSD+E ED K VE LE V++
Sbjct: 361 RQVLSPFWPTLARELPHKLISPMAPPPYTLISSSDTEAEDDKGALSSENLVELLEDVIK- 419
Query: 412 ALSKLKVDDGHAELGMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCS 471
LS+LKV D E +++ WRSELS V ++YAS+GSNMWK+ C++ GGQVEGM+K CS
Sbjct: 420 PLSELKV-DADKETDVSSTWRSELSNVYIWYASYGSNMWKAILNCHLAGGQVEGMKKDCS 478
Query: 472 GSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQF 531
GS +R PK ILWKTFP H+FFG DSSH+WG GGVAFLNPE + +H Y+CLY+I+LEQF
Sbjct: 479 GSVNRTLPKAILWKTFPCHIFFGCDSSHSWGVGGVAFLNPEKNFQHNTYMCLYKISLEQF 538
Query: 532 NDVLLQENVYSDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTM 591
ND+L QEN S D SPLFD +N+++NK+ SLE +K WY NVVYLGKE IP++TM
Sbjct: 539 NDILFQENALSLDAGSPLFDITTVNAISNKEFNSLEVVKGAWYGNVVYLGKEQDIPVVTM 598
Query: 592 TCSLSAVGKFKSGEFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
TCSL +G FKSG+ PLRAP Y NTLIKGLV+G+QLSE EA AYI E + K L
Sbjct: 599 TCSLLDIGNFKSGKLPLRAPNKAYANTLIKGLVDGEQLSEVEAIAYI-EGAAKSL 652
>gi|22327994|ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana]
gi|75247631|sp|Q8RX28.1|HDA5_ARATH RecName: Full=Histone deacetylase 5
gi|20259320|gb|AAM13986.1| putative histone deacetylase [Arabidopsis thaliana]
gi|21539579|gb|AAM53342.1| histone deacetylase-like protein [Arabidopsis thaliana]
gi|23197730|gb|AAN15392.1| histone deacetylase-like protein [Arabidopsis thaliana]
gi|332010034|gb|AED97417.1| histone deacetylase 5 [Arabidopsis thaliana]
Length = 660
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/638 (68%), Positives = 520/638 (81%), Gaps = 4/638 (0%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+VGL+YDE MCKH+TPDG+ HPE P+RI+ IW KLQ AG+ QRCVVL + +A+DK+L
Sbjct: 24 QRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHLQ 83
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VHT++HVNL+K+IS+KQ D RR+RIAS+LNSIYLN GSSEAAYLAAGSV+++AE+VAEG
Sbjct: 84 LVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAGSVVKLAEKVAEG 143
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
EL+ FAIVRPPGHHAE DEAMGFCL+NNVAVAASFLLNERP+LG+ KILIVDWDVHHGN
Sbjct: 144 ELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHGN 203
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQKMFWKDPRVLFFSVHRHE+G FYPA DDG Y M+GEGPG G+NINVPW+ GRCGDAD
Sbjct: 204 GTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQGRCGDAD 263
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA WDHIL+PVA++F PD+I +SAGFDAA DPLGGC VTPYGYSVMLKKLM+FAQGKI
Sbjct: 264 YLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKLMEFAQGKI 323
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
VLALEGGYNL SI+ S LAC+ VLLEDK + G EAYPFESTWRVIQAVRK+L +WP+L
Sbjct: 324 VLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYPFESTWRVIQAVRKRLCTYWPSL 383
Query: 372 ADELPTKLTSLKAP-PAHMISSSDSEDEDTKVETLEAVLQVALSKLK--VDDGHAELGMA 428
ADEL KL + K P P +ISSSDSE ED L+ + ++++ + + + H +
Sbjct: 384 ADELSWKLINQKTPTPIILISSSDSETEDNAQGLLDQMSKLSIENPQGTLLENHQVEPAS 443
Query: 429 TPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFP 488
T WR++L+KVDV+YASFGSNMWK RFLCYI+GGQV+G++K C GS D++PPKE +W+TFP
Sbjct: 444 TSWRADLAKVDVWYASFGSNMWKPRFLCYIQGGQVDGLKKVCVGSMDKSPPKETVWETFP 503
Query: 489 HHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENVYSDDVSSP 548
H LFFG +SS WG GGVAF NP + + ++CLYRITLEQFNDVL QEN + D SP
Sbjct: 504 HRLFFGRESSVGWGVGGVAFTNPLANLIDQTHMCLYRITLEQFNDVLSQENGLNVDSDSP 563
Query: 549 LFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFPL 608
+FD L V NK ++ LEA N WY NVV LGKE IPILTMTC+LSAV KFKSGE P+
Sbjct: 564 VFDLAALQLVDNKGSI-LEAPLNSWYGNVVCLGKERDIPILTMTCTLSAVEKFKSGEIPI 622
Query: 609 RAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
R PA Y NTLI+GLVEG +LS+EEA+AYI +A +K L
Sbjct: 623 RPPAKAYANTLIRGLVEGGRLSKEEAEAYIDKAVSKPL 660
>gi|449440846|ref|XP_004138195.1| PREDICTED: histone deacetylase 5-like [Cucumis sativus]
Length = 659
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/642 (67%), Positives = 522/642 (81%), Gaps = 9/642 (1%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
RR+G+LYD+RMCKH+TPDGDYHPENP RI+AIWNKL +AGI QRCVVL KEA+DK++L+
Sbjct: 19 RRLGVLYDDRMCKHHTPDGDYHPENPYRIRAIWNKLHSAGILQRCVVLKGKEAEDKHILA 78
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH++NHV LIK ISSK+FDSRRD+IASKLNSIY NEGSSEA+YLAAGSVI+VAE+VA+G+
Sbjct: 79 VHSKNHVKLIKEISSKEFDSRRDKIASKLNSIYFNEGSSEASYLAAGSVIDVAEKVAKGD 138
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
L+S AIVRPPGHHAE DEAMGFCL+NN+AVAASF+LNERP+LGI KILIVDWDVHHGN+
Sbjct: 139 LDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNA 198
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQKMFW+DPRVLFFSVHRHE+G+FYPA DGFYT +GEGPG GYNINVPWENGRCGDADY
Sbjct: 199 TQKMFWEDPRVLFFSVHRHEYGSFYPATHDGFYTKVGEGPGAGYNINVPWENGRCGDADY 258
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
LAVWDHILLPVA+++ PD+I++SAGFDAA GDPLGGC VTPYGYS+MLKKLM+ AQGKIV
Sbjct: 259 LAVWDHILLPVAEEYNPDMIMVSAGFDAAVGDPLGGCCVTPYGYSIMLKKLMNLAQGKIV 318
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LALEGGYNL SI++S+LAC +LL+ + V E YPFESTW+VIQAVR++LS FWP L+
Sbjct: 319 LALEGGYNLDSIASSMLACAELLLDGRTVNKPQETYPFESTWQVIQAVRQELSPFWPILS 378
Query: 373 DELPTKLTSLKAPPAHMI---SSSDSEDEDTKVETLEAVLQ-VALSKLKV--DDGHAELG 426
DE+P L S K P ++ S SD E + ++++LE VLQ + S+L+V D +
Sbjct: 379 DEIPDNLISKKVPLPEVLLSSSDSDDEASNGRLKSLEEVLQGITFSQLEVKEDSQGQAVN 438
Query: 427 MATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKT 486
+ PWRSELSK D++YA+FGSN+W R LCYI GGQVEGM++ C+GS D PPKEI+WK+
Sbjct: 439 VTQPWRSELSKTDIWYAAFGSNLWCPRLLCYIRGGQVEGMKRSCTGSMDTTPPKEIMWKS 498
Query: 487 FPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENVYSDDVS 546
FPH LFFGH+ + TWG GGVAFLNPE + K+YLCLYRITLEQFND+L QEN S +S
Sbjct: 499 FPHRLFFGHEHTSTWGQGGVAFLNPESNSEEKSYLCLYRITLEQFNDLLYQENNASSSLS 558
Query: 547 -SPLFDTNDLNSVANKKAVSLEA-LKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSG 604
+PL D +LN V + + S+E GWYHN+VYLGKE IPILTMTCS S + FK G
Sbjct: 559 DNPLLDIANLNKVTSSPSNSVEVPTGKGWYHNLVYLGKERDIPILTMTCSHSDMEDFKDG 618
Query: 605 EFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
+ P+ +PA Y NTL+ GL G LS+EEA YI ASTK L
Sbjct: 619 KIPICSPAKEYVNTLVLGLA-GGPLSKEEALEYIRNASTKPL 659
>gi|334188535|ref|NP_001190583.1| histone deacetylase 5 [Arabidopsis thaliana]
gi|332010035|gb|AED97418.1| histone deacetylase 5 [Arabidopsis thaliana]
Length = 664
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/647 (67%), Positives = 519/647 (80%), Gaps = 18/647 (2%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+VGL+YDE MCKH+TPDG+ HPE P+RI+ IW KLQ AG+ QRCVVL + +A+DK+L
Sbjct: 24 QRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHLQ 83
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VHT++HVNL+K+IS+KQ D RR+RIAS+LNSIYLN GSSEAAYLAAGSV+++AE+VAEG
Sbjct: 84 LVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAGSVVKLAEKVAEG 143
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
EL+ FAIVRPPGHHAE DEAMGFCL+NNVAVAASFLLNERP+LG+ KILIVDWDVHHGN
Sbjct: 144 ELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHGN 203
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQKMFWKDPRVLFFSVHRHE+G FYPA DDG Y M+GEGPG G+NINVPW+ GRCGDAD
Sbjct: 204 GTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQGRCGDAD 263
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK----LMDFA 307
YLA WDHIL+PVA++F PD+I +SAGFDAA DPLGGC VTPYGYSVMLKK LM+FA
Sbjct: 264 YLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKVGVELMEFA 323
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAF 367
QGKIVLALEGGYNL SI+ S LAC+ VLLEDK + G EAYPFESTWRVIQAVRK+L +
Sbjct: 324 QGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYPFESTWRVIQAVRKRLCTY 383
Query: 368 WPTLADELPTKLTSLKAP-PAHMISSSDSEDEDTKVETLEAVLQVALSKLKVDDGHAEL- 425
WP+LADEL KL + K P P +ISSSDSE ED L+ +SKL +++ L
Sbjct: 384 WPSLADELSWKLINQKTPTPIILISSSDSETEDNAQGLLD-----QMSKLSIENPQGTLL 438
Query: 426 ------GMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPP 479
+T WR++L+KVDV+YASFGSNMWK RFLCYI+GGQV+G++K C GS D++PP
Sbjct: 439 ENHQVEPASTSWRADLAKVDVWYASFGSNMWKPRFLCYIQGGQVDGLKKVCVGSMDKSPP 498
Query: 480 KEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQEN 539
KE +W+TFPH LFFG +SS WG GGVAF NP + + ++CLYRITLEQFNDVL QEN
Sbjct: 499 KETVWETFPHRLFFGRESSVGWGVGGVAFTNPLANLIDQTHMCLYRITLEQFNDVLSQEN 558
Query: 540 VYSDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVG 599
+ D SP+FD L V NK ++ LEA N WY NVV LGKE IPILTMTC+LSAV
Sbjct: 559 GLNVDSDSPVFDLAALQLVDNKGSI-LEAPLNSWYGNVVCLGKERDIPILTMTCTLSAVE 617
Query: 600 KFKSGEFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
KFKSGE P+R PA Y NTLI+GLVEG +LS+EEA+AYI +A +K L
Sbjct: 618 KFKSGEIPIRPPAKAYANTLIRGLVEGGRLSKEEAEAYIDKAVSKPL 664
>gi|297797055|ref|XP_002866412.1| hypothetical protein ARALYDRAFT_919345 [Arabidopsis lyrata subsp.
lyrata]
gi|297312247|gb|EFH42671.1| hypothetical protein ARALYDRAFT_919345 [Arabidopsis lyrata subsp.
lyrata]
Length = 660
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/652 (67%), Positives = 527/652 (80%), Gaps = 17/652 (2%)
Query: 6 GEGRTI---KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
G+GR +R+VGL+YDE MCKH+TPDG+ HPE P+RI+ IW KLQ AG+ QRCV+L +
Sbjct: 15 GDGRVAGKSQRKVGLIYDEAMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVLLGS 74
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+A+DK+L VHT++HVNL+K+IS+KQ D +R+RIAS+LNSIYLN GSSEAAYLAAGSV+
Sbjct: 75 SKAEDKHLQLVHTKDHVNLVKSISTKQKDYQRNRIASQLNSIYLNRGSSEAAYLAAGSVV 134
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
+VAE+VAEGEL+ +AIVRPPGHHAE DEAMGFCL+NN+AVAAS+LLN+RP+LG+ KILI
Sbjct: 135 KVAEKVAEGELDCGYAIVRPPGHHAEADEAMGFCLFNNIAVAASYLLNQRPDLGVKKILI 194
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQKMFW+DPRVLFFSVHRHE+G+FYPA DDG Y M+GEGPG G+NINVPW
Sbjct: 195 VDWDVHHGNGTQKMFWEDPRVLFFSVHRHEYGSFYPAGDDGDYNMVGEGPGEGFNINVPW 254
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GRCGDADYLA WDHIL+PVA++F PDII++SAGFDAA GDPLGGCRVTPY YSVMLKK
Sbjct: 255 DQGRCGDADYLAAWDHILIPVAREFNPDIILLSAGFDAAIGDPLGGCRVTPYAYSVMLKK 314
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
LM+FA GKIV+ALEGGYNL SI+ S LAC+ VLL DK + GSSEAYPFESTWRVIQAVRK
Sbjct: 315 LMEFAHGKIVMALEGGYNLDSIAKSSLACVQVLLGDKQIHGSSEAYPFESTWRVIQAVRK 374
Query: 363 KLSAFWPTLADELPTKLTSLKAP-PAHMISSSDSEDEDTKVETLEAVLQVALSKLKVDDG 421
+L A+WP+LADEL KL + K P P +ISSSDS++ED L+ +SKL +++
Sbjct: 375 RLCAYWPSLADELSWKLINQKTPTPIILISSSDSDNEDDAHGLLD-----QMSKLNIENH 429
Query: 422 HAEL-------GMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSK 474
L +T WR++L+ VDV+YASFGSNMWK RFLCYI+GGQV+GM+K C GS
Sbjct: 430 QGTLLENHQVDTASTSWRADLANVDVWYASFGSNMWKPRFLCYIQGGQVDGMKKTCVGSM 489
Query: 475 DRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDV 534
D++PPKEI+W+TFPH LFFG +SS WG GGVAF NP + + ++CLYRITLEQFNDV
Sbjct: 490 DKSPPKEIVWETFPHRLFFGRESSVGWGVGGVAFTNPLANLIDQTHMCLYRITLEQFNDV 549
Query: 535 LLQENVYSDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCS 594
L QEN + D SP+FD L V NK ++ LEA N WY NVV LGKEH IPILTMTC+
Sbjct: 550 LSQENGLNVDSDSPVFDLASLQLVENKGSI-LEAALNSWYGNVVCLGKEHDIPILTMTCT 608
Query: 595 LSAVGKFKSGEFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
LSAV KFKSGE PLR PA Y NTLI+GLVEG + S+EEA+AYI A +K L
Sbjct: 609 LSAVEKFKSGEIPLRPPAKAYANTLIRGLVEGGRFSKEEAEAYIDNAVSKPL 660
>gi|218199973|gb|EEC82400.1| hypothetical protein OsI_26768 [Oryza sativa Indica Group]
Length = 695
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/685 (56%), Positives = 493/685 (71%), Gaps = 53/685 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RVGLLYDERMC H TPDG+ HPENP R++AIW KL A G+ RC+++ AKEA+DK + SV
Sbjct: 12 RVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASV 71
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H++NH+ L+++ISSK++DSRR++IA K NSIY N+GSSE+A+LAAGSVIEVAE+VA GEL
Sbjct: 72 HSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGSVIEVAEKVAAGEL 131
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+SA A+VRPPGHHAE +EAMGFCL+NNVA+AA +LLNER +LGI KILIVDWDVHHGN T
Sbjct: 132 SSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHHGNGT 191
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
QKMF+ DPRVLFFSVHR ++G+FYPA D Y IGEG G GYNINVPWE+G+CGDADY+
Sbjct: 192 QKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYI 251
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A WDH+LLPVA+ F PDI+++SAGFDAA GDPLGGC +TP GY+++L KL+ FAQG+IV+
Sbjct: 252 AAWDHVLLPVAETFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVM 311
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
ALEGGYNL SI+NSV AC VLL DK + + PFES+WRVIQAVR +L FWP L++
Sbjct: 312 ALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQAVRDELKTFWPILSN 371
Query: 374 ELPTKLTSLKAPPAHM---ISSSDSEDEDTK--------VETLEAVLQVALSKLKVD--- 419
LP + SL++ P+ + S SDSE ED ++ + ++ +LSKL +D
Sbjct: 372 RLPENI-SLRSRPSQIELYSSGSDSEVEDLPDAIASVNIIQITDGIISESLSKLNLDEDK 430
Query: 420 -----------------------DGHAELG------MATPWRSELSKVDVFYASFGSNMW 450
DG A + +++ WRSELSKV V+YASFGSNMW
Sbjct: 431 IATKTTSSNVMVEGPTDSVEPQNDGSAAVSTEGISSLSSTWRSELSKVYVWYASFGSNMW 490
Query: 451 KSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLN 510
RFLCYI+GG+ EGM PC GS D +PP+ +WKT PH LFFG S+ WG GGVAFLN
Sbjct: 491 TPRFLCYIQGGKAEGMNIPCFGSHDTSPPRGSMWKTVPHRLFFGRSSTPCWGTGGVAFLN 550
Query: 511 PECDCRHKAYLCLYRITLEQFNDVLLQENVY---------SDDVSSPLFDTNDLNSVANK 561
PE + +Y+C+Y+ITLEQFNDVL QEN ++ SPL +++ V+
Sbjct: 551 PEINHTENSYVCMYKITLEQFNDVLFQENRLVKENGESGKTESPDSPLIGLSEIEFVSRN 610
Query: 562 KAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFPLRAPAPPYTNTLIK 621
K V L +K+ WY NV+YLG+E +PILTMTC S V + +SGE PL P+ Y+ TLI+
Sbjct: 611 KGVHLAPIKDSWYSNVLYLGEEDNLPILTMTCPSSDVERCRSGELPLCPPSKTYSATLIR 670
Query: 622 GLVEGKQLSEEEAKAYIHEASTKRL 646
GL+EGK L + A +YI+ A+T+ L
Sbjct: 671 GLMEGKHLDADAAASYINTAATRGL 695
>gi|115473213|ref|NP_001060205.1| Os07g0602200 [Oryza sativa Japonica Group]
gi|113611741|dbj|BAF22119.1| Os07g0602200 [Oryza sativa Japonica Group]
gi|222637409|gb|EEE67541.1| hypothetical protein OsJ_25020 [Oryza sativa Japonica Group]
Length = 695
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/685 (56%), Positives = 492/685 (71%), Gaps = 53/685 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RVGLLYDERMC H TPDG+ HPENP R++AIW KL A G+ RC+++ AKEA+DK + SV
Sbjct: 12 RVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASV 71
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H++NH+ L+++ISSK++DSRR++IA K NSIY N+GSSE+A+LAAGSVIEVAE+VA GEL
Sbjct: 72 HSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGSVIEVAEKVAAGEL 131
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+SA A+VRPPGHHAE +EAMGFCL+NNVA+AA +LLNER +LGI KILIVDWDVHHGN T
Sbjct: 132 SSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHHGNGT 191
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
QKMF+ DPRVLFFSVHR ++G+FYPA D Y IGEG G GYNINVPWE+G+CGDADY+
Sbjct: 192 QKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYI 251
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A WDH+LLPVA+ F PDI+++SAGFDAA GDPLGGC +TP GY+++L KL+ FAQG+IV+
Sbjct: 252 AAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVM 311
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
ALEGGYNL SI+NSV AC VLL DK + + PFES+WRVIQAVR +L FWP L++
Sbjct: 312 ALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQAVRDELKTFWPVLSN 371
Query: 374 ELPTKLTSLKAPPAHM---ISSSDSEDEDTK--------VETLEAVLQVALSKLKVD--- 419
LP + SL++ P+ + S SDSE ED ++ ++ +LSKL +D
Sbjct: 372 RLPENI-SLRSRPSQIELYSSGSDSEVEDLPDAIASVNIIQITYGIISESLSKLNLDEDK 430
Query: 420 -----------------------DGHAELG------MATPWRSELSKVDVFYASFGSNMW 450
DG A + +++ WRSELSKV V+YASFGSNMW
Sbjct: 431 IATKTTSSNVMVEGPTDSVEPQNDGSAAVSTEGISSLSSTWRSELSKVYVWYASFGSNMW 490
Query: 451 KSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLN 510
RFLCYI+GG+ EGM PC GS D +PP+ +WKT PH LFFG S+ WG GGVAFLN
Sbjct: 491 TPRFLCYIQGGKAEGMNIPCFGSHDTSPPRGSMWKTVPHRLFFGRSSTPCWGTGGVAFLN 550
Query: 511 PECDCRHKAYLCLYRITLEQFNDVLLQENVY---------SDDVSSPLFDTNDLNSVANK 561
PE + +Y+C+Y+ITLEQFNDVL QEN ++ SPL +++ V+
Sbjct: 551 PEINHTENSYVCMYKITLEQFNDVLFQENRLVKENGESGKTESPDSPLIGLSEIEFVSRN 610
Query: 562 KAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFPLRAPAPPYTNTLIK 621
K V L +K+ WY NV+YLG+E +PILTMTC S V + +SGE PL P+ Y+ TLI+
Sbjct: 611 KGVHLAPIKDSWYSNVLYLGEEDNLPILTMTCPSSDVERCRSGELPLCPPSKTYSATLIR 670
Query: 622 GLVEGKQLSEEEAKAYIHEASTKRL 646
GL+EGK L + A +YI+ A+T+ L
Sbjct: 671 GLMEGKHLDADAAASYINTAATRGL 695
>gi|194689096|gb|ACF78632.1| unknown [Zea mays]
gi|223975929|gb|ACN32152.1| unknown [Zea mays]
gi|414590783|tpg|DAA41354.1| TPA: histone deacetylase 6 [Zea mays]
Length = 700
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/672 (56%), Positives = 477/672 (70%), Gaps = 60/672 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VGLLYDERMC H TP+G+ HPENP R+++IW KL AAG+ RCV L AKEA+DK + SVH
Sbjct: 15 VGLLYDERMCAHATPNGEEHPENPERLRSIWRKLNAAGVASRCVALKAKEAEDKYIASVH 74
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
++ H+ L+K ISS +D+ R++IA K NSIYLN+GSSE+A LAAGSVIEVAE+VA GEL+
Sbjct: 75 SKRHIKLMKEISSTIYDASRNKIARKFNSIYLNKGSSESAVLAAGSVIEVAEKVAAGELS 134
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
SA A+VRPPGHHAE DEAMGFCL+NNVAVAA++LLNERP+LGI KILIVDWDVHHGN TQ
Sbjct: 135 SAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKKILIVDWDVHHGNGTQ 194
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
KMF+ DPRVLFFSVHR ++G+FYP+ D + IGE G GYNINVPWE+G+CGDADY+A
Sbjct: 195 KMFYDDPRVLFFSVHRFDYGSFYPSEGDASHCFIGEEAGKGYNINVPWEHGKCGDADYIA 254
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
WDH+LLPV K F PDII++SAGFDAA GDPLGGC +TP GY+++L KL+ FAQG+IV+A
Sbjct: 255 AWDHVLLPVTKVFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMA 314
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL SI+NSV AC VLL DK + E PFESTWRVIQAVR +L WP L+ +
Sbjct: 315 LEGGYNLRSIANSVCACAKVLLGDKFTFNTPEMQPFESTWRVIQAVRNELKTCWPVLSSK 374
Query: 375 LPTKLT-SLKAPPAHMISS---SDSEDEDTKVETLEAVLQVA---------LSKLKVDDG 421
LP ++ +K P+ + +S SDSED D + T+ +V + LSK+K+DD
Sbjct: 375 LPENVSLRIKPAPSELYASDSESDSEDVDELLGTVASVSVIEATGVAISEHLSKMKLDDD 434
Query: 422 HAEL--------------------------------GMATPWRSELSKVDVFYASFGSNM 449
+ ++ WRS+LSK DV+YASFGSNM
Sbjct: 435 SLAVKTNSSCSAAEQHPVDSVKVHNNASVVLTKKISDLSLEWRSDLSKTDVWYASFGSNM 494
Query: 450 WKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFL 509
W+ RFLCYI+GG+ EGM PC GS+D + PK +WKT PH L FG S+ WG GGVAFL
Sbjct: 495 WRPRFLCYIQGGKAEGMNIPCCGSRDTSSPKGTVWKTVPHRLLFGRSSTPCWGTGGVAFL 554
Query: 510 NPECDCRHKAYLCLYRITLEQFNDVLLQEN------------VYSDDVSSPLFDTNDLNS 557
NPE + K+Y+C+Y+ITLEQFND+L QEN VY D SPL ++++
Sbjct: 555 NPEINYNEKSYVCMYKITLEQFNDILFQENRLVLEDGKDGNTVYPD---SPLIGSSEIKF 611
Query: 558 VANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFPLRAPAPPYTN 617
++ +AV LE +K+ WY NV+YLG E +PILTMTC S + ++KSGE L P+ Y
Sbjct: 612 ISTNRAVHLEPIKDSWYSNVLYLGNEDEVPILTMTCPASDIERYKSGELRLAPPSETYAA 671
Query: 618 TLIKGLVEGKQL 629
TLIKGLVEGKQ+
Sbjct: 672 TLIKGLVEGKQM 683
>gi|242046202|ref|XP_002460972.1| hypothetical protein SORBIDRAFT_02g038550 [Sorghum bicolor]
gi|241924349|gb|EER97493.1| hypothetical protein SORBIDRAFT_02g038550 [Sorghum bicolor]
Length = 703
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/691 (55%), Positives = 486/691 (70%), Gaps = 61/691 (8%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RVGLLYD+RM H TPDG+ HPENP R++AIW KL A G+ RCV L AKEA+DK + SV
Sbjct: 16 RVGLLYDDRMRAHATPDGEEHPENPERLRAIWRKLNAEGVAPRCVALKAKEAEDKYIASV 75
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+++H+ L+K ISSK++D+ R++IA K NSIY N+GSSE+A LAAGSVIEVAE+VA GEL
Sbjct: 76 HSKSHIKLMKEISSKKYDATRNKIARKFNSIYFNKGSSESAVLAAGSVIEVAEKVAAGEL 135
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+SA A+VRPPGHHAE DEAMGFCL+NNVAVAA++LLNERP+LGI KILIVDWDVHHGN T
Sbjct: 136 SSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKKILIVDWDVHHGNGT 195
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
QKMF+ DPRVLFFSVHR ++G+FYPA D + IGE G GYNINVPWE+G+CGDADY+
Sbjct: 196 QKMFYNDPRVLFFSVHRFDYGSFYPAEGDASHCFIGEEGGKGYNINVPWEHGKCGDADYI 255
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A WDH+LLPV K F PDII++SAGFDAA GDPLGGC +TP GY+++L KL+ FAQG+IV+
Sbjct: 256 AAWDHVLLPVTKVFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVM 315
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
ALEGGYNL SI+NSV AC VLL DK + E PFESTW VIQAVR +L WP L+
Sbjct: 316 ALEGGYNLRSIANSVCACAKVLLGDKFTFNAPEMQPFESTWSVIQAVRNELKTCWPVLSS 375
Query: 374 ELPTKLT-SLKAPPAHMISSSDSEDEDTKVETLEA------VLQVA-------LSKLKVD 419
+LP ++ ++ P+ + +SSDSE + V L V++VA LSK+K+D
Sbjct: 376 KLPENVSLRIRPSPSEVNASSDSESDSEDVAELLPTVASVNVIEVAGDAISEHLSKMKLD 435
Query: 420 DGHAEL--------------------------------GMATPWRSELSKVDVFYASFGS 447
D + + ++ WRS+LS+ DV+YASFGS
Sbjct: 436 DDNLSVKTTSSCSAAEQHLVDSVKVQNNASVVLTKKISDLSLAWRSDLSRTDVWYASFGS 495
Query: 448 NMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVA 507
NMW+ RFLCY++GG+ EGM C GS+D + PK +WKT PH L FG S+ WG GGVA
Sbjct: 496 NMWRPRFLCYVQGGKAEGMSIACYGSRDTSSPKGTMWKTVPHRLLFGRSSTPCWGTGGVA 555
Query: 508 FLNPECDCRHKAYLCLYRITLEQFNDVLLQEN------------VYSDDVSSPLFDTNDL 555
FLNPE + K+Y+C+Y+ITLEQFND+L QEN VY D SPL ++++
Sbjct: 556 FLNPEINYNEKSYVCMYKITLEQFNDILFQENRLVLKDGKDGNVVYPD---SPLIGSSEI 612
Query: 556 NSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFPLRAPAPPY 615
++ KA+ LE +K+ WY NV+YLG E +PILTMTC S + +FKSGE PL P+ Y
Sbjct: 613 KFISTNKAIHLEPIKDSWYSNVLYLGNEGELPILTMTCPASDIERFKSGELPLAPPSETY 672
Query: 616 TNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
TLI+GLVEGKQL + A YI+ + K L
Sbjct: 673 AATLIRGLVEGKQLDADGAANYINACAAKGL 703
>gi|34394912|dbj|BAC84464.1| putative histone deacetylase [Oryza sativa Japonica Group]
Length = 665
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/657 (57%), Positives = 482/657 (73%), Gaps = 27/657 (4%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RVGLLYDERMC H TPDG+ HPENP R++AIW KL A G+ RC+++ AKEA+DK + SV
Sbjct: 12 RVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASV 71
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H++NH+ L+++ISSK++DSRR++IA K NSIY N+GSSE+A+LAAGSVIEVAE+VA GEL
Sbjct: 72 HSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGSVIEVAEKVAAGEL 131
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+SA A+VRPPGHHAE +EAMGFCL+NNVA+AA +LLNER +LGI KILIVDWDVHHGN T
Sbjct: 132 SSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHHGNGT 191
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
QKMF+ DPRVLFFSVHR ++G+FYPA D Y IGEG G GYNINVPWE+G+CGDADY+
Sbjct: 192 QKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYI 251
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A WDH+LLPVA+ F PDI+++SAGFDAA GDPLGGC +TP GY+++L KL+ FAQG+IV+
Sbjct: 252 AAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVM 311
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
ALEGGYNL SI+NSV AC VLL DK + + PFES+WRVIQA+ S + +
Sbjct: 312 ALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQALYSSGS---DSEVE 368
Query: 374 ELPTKLTSLKAPPAH--MISSSDSE---DED---TKVETLEAVLQVALSKLK-VDDGHAE 424
+LP + S+ +IS S S+ DED TK + +++ ++ +DG A
Sbjct: 369 DLPDAIASVNIIQITYGIISESLSKLNLDEDKIATKTTSSNVMVEGPTDSVEPQNDGSAA 428
Query: 425 L------GMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNP 478
+ +++ WRSELSKV V+YASFGSNMW RFLCYI+GG+ EGM PC GS D +P
Sbjct: 429 VSTEGISSLSSTWRSELSKVYVWYASFGSNMWTPRFLCYIQGGKAEGMNIPCFGSHDTSP 488
Query: 479 PKEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQE 538
P+ +WKT PH LFFG S+ WG GGVAFLNPE + +Y+C+Y+ITLEQFNDVL QE
Sbjct: 489 PRGSMWKTVPHRLFFGRSSTPCWGTGGVAFLNPEINHTENSYVCMYKITLEQFNDVLFQE 548
Query: 539 NVY---------SDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPIL 589
N ++ SPL +++ V+ K V L +K+ WY NV+YLG+E +PIL
Sbjct: 549 NRLVKENGESGKTESPDSPLIGLSEIEFVSRNKGVHLAPIKDSWYSNVLYLGEEDNLPIL 608
Query: 590 TMTCSLSAVGKFKSGEFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
TMTC S V + +SGE PL P+ Y+ TLI+GL+EGK L + A +YI+ A+T+ L
Sbjct: 609 TMTCPSSDVERCRSGELPLCPPSKTYSATLIRGLMEGKHLDADAAASYINTAATRGL 665
>gi|195604786|gb|ACG24223.1| histone deacetylase 6 [Zea mays]
Length = 701
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/676 (56%), Positives = 473/676 (69%), Gaps = 61/676 (9%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VGLLYDERMC H TPDG HPENP R+++IW KL AAG+ RCV L AKEA+DK + SVH
Sbjct: 15 VGLLYDERMCAHATPDGKEHPENPERLRSIWRKLNAAGVASRCVALKAKEAEDKYIASVH 74
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
++ H+ L+K ISS +D+ R++IA K NSIY N+GSSE+A LAAGSVIEVAE+VA GEL+
Sbjct: 75 SKRHIKLMKEISSTIYDASRNKIARKFNSIYFNKGSSESAVLAAGSVIEVAEKVAAGELS 134
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
SA A+VRPPGHHAE DEAMGFCL+NNVAVAA++LLNERP+LGI KILIVDWDVHHGN TQ
Sbjct: 135 SAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKKILIVDWDVHHGNGTQ 194
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
KMF+ DPRVLFFSVHR ++G+FYPA D + IGE G GYNINVPWE+G+CGDADY+A
Sbjct: 195 KMFYDDPRVLFFSVHRFDYGSFYPAEGDASHCFIGEEAGKGYNINVPWEHGKCGDADYIA 254
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
WDH+LLPV K F PDII++SAGFDAA GDPLGGC +TP GY+++L KL+ FAQG+IV+A
Sbjct: 255 AWDHVLLPVTKVFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMA 314
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL SI+NSV AC VLL DK + E PFESTWRVIQAVR +L WP L+ +
Sbjct: 315 LEGGYNLRSIANSVYACAKVLLGDKFTFNTPEMQPFESTWRVIQAVRNELKTCWPVLSSK 374
Query: 375 LPTKLT-SLKAPPAHMISSSDSEDED----------TKVETLEAV---LQVALSKLKVDD 420
LP ++ +K P+ + +SSDSE + V +EA + LSK+K+DD
Sbjct: 375 LPENVSLRIKPAPSELYASSDSESDSEDVDELLGTVASVNVIEATGVAISEHLSKMKLDD 434
Query: 421 GHAEL--------------------------------GMATPWRSELSKVDVFYASFGSN 448
+ ++ WRS+LSK DV+YASFGSN
Sbjct: 435 DSLAVKTNSSCSAAEQHPVDSVKVHNNASVVLTKKISDLSLEWRSDLSKTDVWYASFGSN 494
Query: 449 MWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAF 508
MW+ RFLCYI+GG+ EGM PC GS+D + PK +WKT PH L FG S+ WG GGVAF
Sbjct: 495 MWRPRFLCYIQGGKAEGMNIPCCGSRDTSSPKGTVWKTVPHRLLFGRSSTPCWGTGGVAF 554
Query: 509 LNPECDCRHKAYLCLYRITLEQFNDVLLQEN------------VYSDDVSSPLFDTNDLN 556
LNPE + K Y+C+Y+ITLEQFND+L QEN VY D SPL ++++
Sbjct: 555 LNPEINYNEKLYVCMYKITLEQFNDILFQENRLVLEDGKDGNTVYPD---SPLIGSSEIK 611
Query: 557 SVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFPLRAPAPPYT 616
++ +AV LE +K+ WY NV+YLG E +PILTMTC S + ++KSGE L P+ Y
Sbjct: 612 FISTNRAVHLEPIKDSWYSNVLYLGNEDEVPILTMTCPASDIERYKSGELRLAPPSETYA 671
Query: 617 NTLIKGLVEGKQLSEE 632
TLIKGLVEGKQ+ +
Sbjct: 672 ATLIKGLVEGKQMDAD 687
>gi|162458619|ref|NP_001105019.1| probable histone deacetylase 19 [Zea mays]
gi|32968028|gb|AAP92528.1|AF322918_1 HDA1 [Zea mays]
Length = 701
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/673 (56%), Positives = 473/673 (70%), Gaps = 61/673 (9%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VGLLYD RMC H TPDG+ HPENP R+++IW KL AAG+ RCV L AKEA+DK + SVH
Sbjct: 15 VGLLYDLRMCAHATPDGEEHPENPERLRSIWRKLNAAGVASRCVALKAKEAEDKYIASVH 74
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
++ H+ L+K ISS +D+ R++IA K NSIYLN+GSSE+A LAAGSVIEVAE+VA GEL+
Sbjct: 75 SKRHIKLMKEISSTIYDASRNKIARKFNSIYLNKGSSESAVLAAGSVIEVAEKVAAGELS 134
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
SA A+VRPPGHHAE DEAMGFCL+NNVAVAA++LLNERP+LGI KILIVDWDVHHGN TQ
Sbjct: 135 SAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKKILIVDWDVHHGNGTQ 194
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
KMF+ DPRVLFFSVHR ++G+FYP+ D + IGE G GYNINVPWE+G+CGDADY+A
Sbjct: 195 KMFYDDPRVLFFSVHRFDYGSFYPSEGDASHCFIGEEAGKGYNINVPWEHGKCGDADYIA 254
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
WDH+LLPV K F PDII++SAGFDAA GDPLGGC +TP GY+++L KL+ FAQG+IV+A
Sbjct: 255 AWDHVLLPVTKVFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMA 314
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL SI+NSV AC VLL DK + E PFESTWRVIQAVR +L WP L+ +
Sbjct: 315 LEGGYNLRSIANSVCACAKVLLGDKFTFNTPEMQPFESTWRVIQAVRNELKTCWPVLSSK 374
Query: 375 LPTKLT-SLKAPPAHMISSSDSEDED----------TKVETLEAV---LQVALSKLKVDD 420
LP ++ +K P+ + +SSDSE + V +EA + LSK+K+DD
Sbjct: 375 LPENVSLRIKPAPSELYASSDSESDSEDVDELLGTVASVSVIEATGVAISEHLSKMKLDD 434
Query: 421 GHAEL--------------------------------GMATPWRSELSKVDVFYASFGSN 448
G + ++ WRS+LSK DV+YASFGSN
Sbjct: 435 GSLAVKTNSSCSAAEQHPVDSVKVHNNASVVLTKKISDLSLEWRSDLSKTDVWYASFGSN 494
Query: 449 MWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAF 508
MW+ RFLCYI+GG+ EGM PC GS+D + PK WKT PH L FG S+ WG GGVAF
Sbjct: 495 MWRPRFLCYIQGGKAEGMNIPCCGSRDTSSPKGTEWKTVPHRLLFGRSSTPCWGTGGVAF 554
Query: 509 LNPECDCRHKAYLCLYRITLEQFNDVLLQEN------------VYSDDVSSPLFDTNDLN 556
LNPE + K+Y+C+Y+ITLEQFND L QEN VY D SPL ++++
Sbjct: 555 LNPEINYNEKSYVCMYKITLEQFNDFLFQENRLVLEDGKDGNTVYPD---SPLIGSSEIK 611
Query: 557 SVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFPLRAPAPPYT 616
++ +AV LE +K+ WY NV+YLG E +PILTMTC S + ++KSGE L P+ Y
Sbjct: 612 FISTNRAVHLEPIKDSWYSNVLYLGNEDEVPILTMTCPASDIERYKSGELRLAPPSETYA 671
Query: 617 NTLIKGLVEGKQL 629
TLIKGLVEGKQ+
Sbjct: 672 ATLIKGLVEGKQM 684
>gi|357116448|ref|XP_003559993.1| PREDICTED: histone deacetylase 5-like [Brachypodium distachyon]
Length = 709
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/676 (54%), Positives = 467/676 (69%), Gaps = 57/676 (8%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RVGLLYDERMC H TPDG YHPENP R++AIW KL G+ +RCV++ AKEAKDK + SV
Sbjct: 22 RVGLLYDERMCAHATPDGKYHPENPERLRAIWKKLGEQGVAERCVIMPAKEAKDKYIASV 81
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+ HV L+K+ISSK+ + RR +AS NSIY NEGSSE+A+LAAGSVIEVAE+VA GEL
Sbjct: 82 HSSTHVKLMKSISSKEHNYRRKNLASNYNSIYFNEGSSESAFLAAGSVIEVAEKVAAGEL 141
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+SA A+VRPPGHHAE +E MGFCL+NNVA+AA++LLNERP+LGI KILIVDWDVHHGN T
Sbjct: 142 SSAIALVRPPGHHAEHNEPMGFCLFNNVAIAANYLLNERPDLGIKKILIVDWDVHHGNGT 201
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
QKMF+ D RVLFFSVHR + G FYP+ D + IGEG G GYNINVPW +G CGDADY+
Sbjct: 202 QKMFYNDSRVLFFSVHRFDHGAFYPSQGDASHCFIGEGDGQGYNINVPWNHGGCGDADYI 261
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A WDH+LLPVA+ F PDII++SAGFDAA GDPLGGC VTP GY+ +L KL+ FA+G++V+
Sbjct: 262 AAWDHVLLPVAEAFDPDIILLSAGFDAARGDPLGGCDVTPDGYARLLTKLLGFAKGRMVM 321
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
ALEGGYN SI+NSVL C VLL D+ + PF+STW VI+ VR +L WP L
Sbjct: 322 ALEGGYNTVSIANSVLFCAKVLLGDQFRLKPPKDSPFDSTWNVIKEVRDELKTCWPVLRS 381
Query: 374 ELPTKLTSLKAPPAH--MISSSDSE----------DEDTKVETLEA---VLQVALSKLKV 418
+LP K L++ ++ + SSS SE D ++ V ++ V+ ++ L +
Sbjct: 382 KLP-KNVPLRSSSSYVELYSSSGSECDVEDDNERPDANSSVSIIQVDDDVVSERIAMLTL 440
Query: 419 DDGHAEL--------------------------------GMATPWRSELSKVDVFYASFG 446
D+ + G + WRS LS+V V+YASFG
Sbjct: 441 DEDNLATKTTSSCTTDERRATDSVQAQNDGFVVASTGIYGQSLTWRSALSRVYVWYASFG 500
Query: 447 SNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGV 506
SNMWK RF+CYI+GG+V+GM C GS D +PP+ +WKT PH LFFG S+ WG GGV
Sbjct: 501 SNMWKPRFMCYIQGGKVDGMSIACFGSHDTSPPRGAMWKTVPHRLFFGRSSTPCWGAGGV 560
Query: 507 AFLNPECDCRHKAYLCLYRITLEQFNDVLLQEN-VYSDD--------VSSPLFDTNDLNS 557
AFLNPE + K+++C+Y+ITLEQFNDVL QEN + DD SPL +++ S
Sbjct: 561 AFLNPETNYNEKSWICMYKITLEQFNDVLFQENRLVKDDNEGGKAESPDSPLIGLSEIES 620
Query: 558 VANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFPLRAPAPPYTN 617
+++ KA+ LE +K+ WY NV+YLG+E IPILTMTC V + K+GE PL P+ Y+
Sbjct: 621 LSSNKALHLEPIKDSWYSNVLYLGQEDSIPILTMTCPSLDVVRHKAGELPLSPPSDTYSA 680
Query: 618 TLIKGLVEGKQLSEEE 633
TLI+GLVEGKQL E
Sbjct: 681 TLIRGLVEGKQLDANE 696
>gi|302795185|ref|XP_002979356.1| hypothetical protein SELMODRAFT_110614 [Selaginella moellendorffii]
gi|300153124|gb|EFJ19764.1| hypothetical protein SELMODRAFT_110614 [Selaginella moellendorffii]
Length = 630
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 304/634 (47%), Positives = 421/634 (66%), Gaps = 25/634 (3%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VGL+YD RMC H P HPE P RI AIW +L+ AG+ RCV ++A+ A + L +VH
Sbjct: 5 VGLVYDRRMCAHRDPFNKLHPEQPARITAIWKRLEDAGVLDRCVRVDARPATAEELATVH 64
Query: 75 TENHVNLIKNISSKQFDSR-RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
T+ H+ + ++SS+ + R +A + NSIY N+GSSE+A LAAGSV+E++ +VA GEL
Sbjct: 65 TDRHIEKMSSVSSRAYGKEGRAALARRYNSIYFNDGSSESALLAAGSVVELSLKVARGEL 124
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL-GINKILIVDWDVHHGNS 192
SA AIVRPPGHHAE DEAMGFCL+NNVAVAA L + + + G +K+LIVDWDVHHGN
Sbjct: 125 ASAAAIVRPPGHHAEADEAMGFCLFNNVAVAAQILSSGKVSVAGSHKVLIVDWDVHHGNG 184
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ MFW+DP VL+FSVHR++ G FYP +G + +G G G G+NINVPW G DADY
Sbjct: 185 TQNMFWQDPNVLYFSVHRYDDGYFYPGGQEGNFDKVGGGAGAGFNINVPWPRGGYSDADY 244
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+AVW+H+L+PVA++F PDI++IS GFD+A GDPLGGC++TP GYS+M ++LM A GKIV
Sbjct: 245 VAVWEHVLMPVAREFNPDIVLISGGFDSARGDPLGGCKLTPLGYSIMTQELMQLAGGKIV 304
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LALEGGYNL SI+ S LAC+ VLL D +ESTW +I VR++L +WP L
Sbjct: 305 LALEGGYNLESIAESYLACVQVLLGDIQSERHDIERAYESTWTIIDKVRQELCQYWPVLR 364
Query: 373 D--ELPTKLTSLKAPPAHMISSSDSEDED------TKVETLEAVLQVALSKLKVDDGHAE 424
+ E+P +S + + +D+ +E + ET+E ++Q+++S +V H+
Sbjct: 365 EKIEMPASRSSPPKAFERLTTEADAVEETHDGEVFVRSETVE-IVQISVSS-EVSSPHS- 421
Query: 425 LGMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILW 484
+P+ ++YA++GSNMW +R +CYI+GG+VEG++ P G ++ PP E W
Sbjct: 422 ---PSPY--------IWYATYGSNMWPARLMCYIQGGKVEGIEVPGQGLLEKTPPLEDFW 470
Query: 485 KTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENVYSDD 544
+ PH LFFG + S +WG GGVAFLNP +L Y+ITLEQFN +L QEN
Sbjct: 471 LSAPHRLFFGRERSLSWGNGGVAFLNPVPSDGDNCHLRAYKITLEQFNGILAQENRLDSM 530
Query: 545 VSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSG 604
+S L + ++ + + ++ ++N WY +V+YLG ++G PILT+TCS +F+ G
Sbjct: 531 AASGLVSPSHFETLKSSPHI-VDFIENAWYGSVLYLGDKNGAPILTITCSQRDAKRFECG 589
Query: 605 EFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYI 638
E P RAP+ Y NTLI GL+E LS E+ AY+
Sbjct: 590 ELPTRAPSVAYQNTLINGLLEKGDLSHEQILAYV 623
>gi|302817308|ref|XP_002990330.1| hypothetical protein SELMODRAFT_131541 [Selaginella moellendorffii]
gi|300141892|gb|EFJ08599.1| hypothetical protein SELMODRAFT_131541 [Selaginella moellendorffii]
Length = 630
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 303/634 (47%), Positives = 420/634 (66%), Gaps = 25/634 (3%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VG++YD RMC H P HPE P RI AIW +L+ AG+ RCV ++A+ A + L +VH
Sbjct: 5 VGVVYDRRMCAHRDPFNKLHPEQPARITAIWQRLEDAGVLDRCVRVDARPATAEELATVH 64
Query: 75 TENHVNLIKNISSKQFDSR-RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
TE H+ + ++SS+ + R +A + NSIY N+GSSE+A LAAGSV+E++ +VA GEL
Sbjct: 65 TERHIEKMSSVSSRAYGKEGRAALARRYNSIYFNDGSSESALLAAGSVVELSLKVARGEL 124
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL-GINKILIVDWDVHHGNS 192
SA AIVRPPGHHAE DEAMGFCL+NNVAVAA L + + + G +K+LIVDWDVHHGN
Sbjct: 125 ASAAAIVRPPGHHAEADEAMGFCLFNNVAVAAQILSSGKVSVAGSHKVLIVDWDVHHGNG 184
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ MFW+DP VL+FSVHR++ G FYP +G + +G G G G+NINVPW G DADY
Sbjct: 185 TQNMFWQDPNVLYFSVHRYDDGYFYPGGQEGNFDKVGGGAGAGFNINVPWPRGGYSDADY 244
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+AVW+H+L+PVA++F PDI++IS GFD+A GDPLGGC++TP GYS+M ++LM A GKIV
Sbjct: 245 VAVWEHVLMPVAREFNPDIVLISGGFDSARGDPLGGCKLTPLGYSIMTQELMQLAGGKIV 304
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LALEGGYNL SI+ S LAC+ VLL D +ESTW I VR++L +WP L
Sbjct: 305 LALEGGYNLESIAESYLACVQVLLGDIQSERHEIEQAYESTWTTIDKVRQELCQYWPVLR 364
Query: 373 D--ELPTKLTSLKAPPAHMISSSDSEDED------TKVETLEAVLQVALSKLKVDDGHAE 424
+ E+P +S + + +D+ +E + ET+E ++Q+++S +V H+
Sbjct: 365 EKIEMPASRSSPPKAFERLTTEADAVEETHDGEVFVRSETVE-IVQISVSS-EVSSPHS- 421
Query: 425 LGMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILW 484
+P+ ++YA++GSNMW +R +CYI+GG+VEG++ P G ++ PP E W
Sbjct: 422 ---PSPY--------IWYATYGSNMWPARLMCYIQGGKVEGIEVPGQGLLEKTPPLEDFW 470
Query: 485 KTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENVYSDD 544
+ PH LFFG + S +WG GGVAFLNP +L Y+ITLEQFN +L QEN
Sbjct: 471 LSAPHRLFFGRERSLSWGNGGVAFLNPVPSDGDNCHLRAYKITLEQFNGILAQENRLDSV 530
Query: 545 VSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSG 604
+S L + ++ + + ++ ++N WY +V+YLG ++G PILT+TCS +F+ G
Sbjct: 531 AASGLVSPSHFETLKSSPHI-VDFIENAWYGSVLYLGDKNGAPILTITCSQRDAKRFECG 589
Query: 605 EFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYI 638
E P RAP+ Y NTLI GL+E +S E+ AY+
Sbjct: 590 ELPTRAPSVAYQNTLINGLLEKGDMSHEQILAYV 623
>gi|449531388|ref|XP_004172668.1| PREDICTED: histone deacetylase 5-like, partial [Cucumis sativus]
Length = 365
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 273/347 (78%), Positives = 317/347 (91%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
RR+G+LYD+RMCKH+TPDGDYHPENP RI+AIWNKL +AGI QRCVVL KEA+DK++L+
Sbjct: 19 RRLGVLYDDRMCKHHTPDGDYHPENPYRIRAIWNKLHSAGILQRCVVLKGKEAEDKHILA 78
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH++NHV LIK ISSK+FDSRRD+IASKLNSIY NEGSSEA+YLAAGSVI+VAE+VA+G+
Sbjct: 79 VHSKNHVKLIKEISSKEFDSRRDKIASKLNSIYFNEGSSEASYLAAGSVIDVAEKVAKGD 138
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
L+S AIVRPPGHHAE DEAMGFCL+NN+AVAASF+LNERP+LGI KILIVDWDVHHGN+
Sbjct: 139 LDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNA 198
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQKMFW+DPRVLFFSVHRHE+G+FYPA DGFYT +GEGPG GYNINVPWENGRCGDADY
Sbjct: 199 TQKMFWEDPRVLFFSVHRHEYGSFYPATHDGFYTKVGEGPGAGYNINVPWENGRCGDADY 258
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
LAVWDHILLPVA+++ PD+I++SAGFDAA GDPLGGC VTPYGYS+MLKKLM+ AQGKIV
Sbjct: 259 LAVWDHILLPVAEEYNPDMIMVSAGFDAAVGDPLGGCCVTPYGYSIMLKKLMNLAQGKIV 318
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQA 359
LALEGGYNL SI++S+LAC +LL+ + V E YPFESTW+VIQA
Sbjct: 319 LALEGGYNLDSIASSMLACAELLLDGRTVNKPQETYPFESTWQVIQA 365
>gi|9759454|dbj|BAB10370.1| unnamed protein product [Arabidopsis thaliana]
Length = 1108
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 270/349 (77%), Positives = 310/349 (88%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+VGL+YDE MCKH+TPDG+ HPE P+RI+ IW KLQ AG+ QRCVVL + +A+DK+L
Sbjct: 700 QRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHLQ 759
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VHT++HVNL+K+IS+KQ D RR+RIAS+LNSIYLN GSSEAAYLAAGSV+++AE+VAEG
Sbjct: 760 LVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAGSVVKLAEKVAEG 819
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
EL+ FAIVRPPGHHAE DEAMGFCL+NNVAVAASFLLNERP+LG+ KILIVDWDVHHGN
Sbjct: 820 ELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHGN 879
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQKMFWKDPRVLFFSVHRHE+G FYPA DDG Y M+GEGPG G+NINVPW+ GRCGDAD
Sbjct: 880 GTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQGRCGDAD 939
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA WDHIL+PVA++F PD+I +SAGFDAA DPLGGC VTPYGYSVMLKKLM+FAQGKI
Sbjct: 940 YLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKLMEFAQGKI 999
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAV 360
VLALEGGYNL SI+ S LAC+ VLLEDK + G EAYPFESTWRVIQAV
Sbjct: 1000 VLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYPFESTWRVIQAV 1048
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 270/390 (69%), Positives = 322/390 (82%), Gaps = 4/390 (1%)
Query: 6 GEGRTI---KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
G+G+ +R+VGL+YDE MCKH+TP+G E P+RI+ IW KLQ AG+ QRCVVL
Sbjct: 48 GDGKVAGKSQRKVGLVYDETMCKHDTPNGKVDVECPDRIRVIWEKLQLAGVTQRCVVLGG 107
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+A+DK+L VHT+ HVNL+K+IS+K+ DSRR++IAS+L+SIYLN GSSEAAYLAAGSV+
Sbjct: 108 SKAEDKHLKLVHTKKHVNLVKSISTKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAGSVV 167
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
+VAE+VAEGEL+ FAIVRPPGHHAE DEAMGFCL+NNVAVAASFLLNERP+L + KILI
Sbjct: 168 KVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILI 227
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWD+HHGN TQKMFWKD RVL FSVHRH+ G+FYP DDG + M+GEGPG G+NINVPW
Sbjct: 228 VDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPW 287
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
E G CGDADYLAVW+HIL+PV K+F PDII++SAGFDAA GDPLGGC VTPYGYSVMLKK
Sbjct: 288 EQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKK 347
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
LM+FA GKIVLALEGGYNL S+ S LAC+ VLLEDK + GSSE YP EST RVIQAVR+
Sbjct: 348 LMEFAHGKIVLALEGGYNLESLGKSSLACVQVLLEDKQIHGSSETYPLESTRRVIQAVRE 407
Query: 363 KLSAFWPTLADELPTKLTSLKAPPAHMISS 392
+L +WP+L + + +LK P A S+
Sbjct: 408 RLCTYWPSLDASMASN-ENLKNPSAERNSA 436
>gi|22327996|ref|NP_200915.2| histone deacetylase 18 [Arabidopsis thaliana]
gi|75246526|sp|Q8LRK8.1|HDA18_ARATH RecName: Full=Histone deacetylase 18
gi|21105769|gb|AAM34783.1|AF510670_1 HDA18 [Arabidopsis thaliana]
gi|332010036|gb|AED97419.1| histone deacetylase 18 [Arabidopsis thaliana]
Length = 682
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 268/381 (70%), Positives = 318/381 (83%), Gaps = 1/381 (0%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+VGL+YDE MCKH+TP+G E P+RI+ IW KLQ AG+ QRCVVL +A+DK+L
Sbjct: 57 QRKVGLVYDETMCKHDTPNGKVDVECPDRIRVIWEKLQLAGVTQRCVVLGGSKAEDKHLK 116
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VHT+ HVNL+K+IS+K+ DSRR++IAS+L+SIYLN GSSEAAYLAAGSV++VAE+VAEG
Sbjct: 117 LVHTKKHVNLVKSISTKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAGSVVKVAEKVAEG 176
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
EL+ FAIVRPPGHHAE DEAMGFCL+NNVAVAASFLLNERP+L + KILIVDWD+HHGN
Sbjct: 177 ELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIVDWDIHHGN 236
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQKMFWKD RVL FSVHRH+ G+FYP DDG + M+GEGPG G+NINVPWE G CGDAD
Sbjct: 237 GTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPWEQGGCGDAD 296
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLAVW+HIL+PV K+F PDII++SAGFDAA GDPLGGC VTPYGYSVMLKKLM+FA GKI
Sbjct: 297 YLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKKLMEFAHGKI 356
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
VLALEGGYNL S+ S LAC+ VLLEDK + GSSE YP EST RVIQAVR++L +WP+L
Sbjct: 357 VLALEGGYNLESLGKSSLACVQVLLEDKQIHGSSETYPLESTRRVIQAVRERLCTYWPSL 416
Query: 372 ADELPTKLTSLKAPPAHMISS 392
+ + +LK P A S+
Sbjct: 417 DASMASN-ENLKNPSAERNSA 436
>gi|297797057|ref|XP_002866413.1| hypothetical protein ARALYDRAFT_919346 [Arabidopsis lyrata subsp.
lyrata]
gi|297312248|gb|EFH42672.1| hypothetical protein ARALYDRAFT_919346 [Arabidopsis lyrata subsp.
lyrata]
Length = 793
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/411 (66%), Positives = 321/411 (78%), Gaps = 31/411 (7%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+VGL+YDE MCKH+TP+G+ E P+RI+ IW KLQ AG+ QRCVVL +A+DK+L
Sbjct: 24 QRKVGLVYDETMCKHDTPNGEVDVECPDRIRFIWEKLQLAGVTQRCVVLGGSKAEDKHLK 83
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VHT+ HVN +K+IS+KQ DSRR+RIAS L+SIYLN GSSEAAYLAAGSV+ VAE+VAEG
Sbjct: 84 LVHTKKHVNFVKSISTKQKDSRRNRIASVLDSIYLNGGSSEAAYLAAGSVVNVAEKVAEG 143
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER------------------P 173
EL+ FAIVRPPGHHAE DEAMGFCL+NNVAVAAS+LLNER P
Sbjct: 144 ELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASYLLNERSHSFGVFVLMFVCFLQMQP 203
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHR-----------HEFGTFYPANDD 222
+LG+ KILIVDWD+HHGN TQKMFWKDPRVL FSVHR ++ G+FYPA+DD
Sbjct: 204 DLGVKKILIVDWDIHHGNGTQKMFWKDPRVLIFSVHRFKVAGNAYVARYDHGSFYPASDD 263
Query: 223 GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAA 282
G Y M+GEGPG G+NINVPWE G CGDADYLA WDHIL+PV K+F PDII++SAGFDAA
Sbjct: 264 GDYNMVGEGPGKGFNINVPWEQGGCGDADYLAAWDHILIPVTKEFNPDIILLSAGFDAAI 323
Query: 283 GDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVA 342
GDPLGGC +TP GYSVMLKKLM+FAQGKIVLALEGGYNL S++ S LAC+ VLLE+K +
Sbjct: 324 GDPLGGCCITPDGYSVMLKKLMEFAQGKIVLALEGGYNLESLAKSSLACVQVLLEEKGIQ 383
Query: 343 GSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLK--APPAHMIS 391
SS AYP EST RVI+AVR++L +WP+LADEL KL K P H+ S
Sbjct: 384 CSSGAYPLESTRRVIRAVRERLCTYWPSLADELSCKLIDQKTLTPVGHLSS 434
>gi|297789218|ref|XP_002862598.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308222|gb|EFH38856.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 576
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/379 (68%), Positives = 302/379 (79%), Gaps = 11/379 (2%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
G YDE MCKH+TP+G+ E P+RI+ IW KLQ AG+ QRCVVL +A+DK+L VHT
Sbjct: 2 GSCYDETMCKHDTPNGEVDVECPDRIRFIWEKLQLAGVTQRCVVLGGSKAEDKHLKLVHT 61
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+ HVN +K+IS+KQ DSRR+RIAS L+SIYLN GSSEAAYLAAGSV+ VAE+VAEGEL+
Sbjct: 62 KKHVNFVKSISTKQKDSRRNRIASVLDSIYLNGGSSEAAYLAAGSVVNVAEKVAEGELDC 121
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
FAIVRPPGHHAE DEAMGFCL+NNVAVAAS+LLNERP+L + KILIVDWD+HHGN TQK
Sbjct: 122 GFAIVRPPGHHAEADEAMGFCLFNNVAVAASYLLNERPDLDVKKILIVDWDIHHGNGTQK 181
Query: 196 MFWKDPRVLFFSVH-----------RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN 244
MFWKDPRVL FSVH R++ G+FYPA DDG Y M+GEGPG G+NINVPWE
Sbjct: 182 MFWKDPRVLIFSVHRFKVAGNAYVARYDHGSFYPAGDDGDYNMVGEGPGKGFNINVPWEQ 241
Query: 245 GRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM 304
G CGDADYLA WDHIL+PV K+F PDII++SAGFDAA GDPLGGC VTP GYSVMLKKLM
Sbjct: 242 GGCGDADYLAAWDHILIPVTKEFNPDIILLSAGFDAAIGDPLGGCCVTPDGYSVMLKKLM 301
Query: 305 DFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKL 364
+FAQGKIVLALEGGYNL S++ S LAC+ VLLE+K + SS AYP EST RV++A ++L
Sbjct: 302 EFAQGKIVLALEGGYNLESLAKSSLACVQVLLEEKGIQCSSGAYPLESTRRVVRAENREL 361
Query: 365 SAFWPTLADELPTKLTSLK 383
+D L T +LK
Sbjct: 362 RYNVFADSDTLMTSNENLK 380
>gi|168012186|ref|XP_001758783.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162689920|gb|EDQ76289.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 577
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/329 (59%), Positives = 243/329 (73%), Gaps = 1/329 (0%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RVGL+YDERMC H D D HPE P RI +I+ +L+A G+ RCV ++A+EA L +V
Sbjct: 4 RVGLVYDERMCAHENVDSDDHPEQPARITSIYQRLKAEGVVDRCVQVDAREATPAELSTV 63
Query: 74 HTENHVNLIKNISSKQF-DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
HTE+H++L++ + K F +R R+ +SIY NEGS+ AA LAAGSVIEVA +VAEG+
Sbjct: 64 HTEDHISLMQELGHKSFGKKKRRRLQETFDSIYFNEGSAVAALLAAGSVIEVATQVAEGK 123
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
L S ++RPPGHHAE D MGFCL NNVAVAA L +E+ ELG+ K+LIVDWDVHHGN
Sbjct: 124 LASGACVIRPPGHHAEADRPMGFCLLNNVAVAAHILAHEKTELGVKKVLIVDWDVHHGNG 183
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ MFW DP+V++FSVHR + G FYP +DG T +G G GYNINVPW N GDADY
Sbjct: 184 TQHMFWTDPQVMYFSVHRFDQGRFYPPGNDGNCTEVGGEEGKGYNINVPWPNKDYGDADY 243
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
LAVW +IL+PVA+ F PDI++ISAGFD+A GDPLG C VTP GY M ++LM+ A G++V
Sbjct: 244 LAVWKYILMPVARQFNPDIVLISAGFDSARGDPLGRCNVTPGGYFQMTRQLMELANGRVV 303
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPV 341
LALEGGYNL SIS S LACM +L D PV
Sbjct: 304 LALEGGYNLTSISESYLACMQAMLGDSPV 332
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 126/202 (62%), Gaps = 2/202 (0%)
Query: 440 VFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSH 499
++YA +GSNMW+ RF+CYI+GG+VEGM + C G +D++PP W + P LFFGH+S+
Sbjct: 374 MWYACYGSNMWRPRFMCYIQGGKVEGMSRTCIGCRDKSPPLASEWLSIPSRLFFGHESTK 433
Query: 500 TWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENVYSDDVSSPLFDTNDLNSVA 559
WG GGVAF++P + ++ +Y+IT+EQFNDVL QEN V + +
Sbjct: 434 MWGLGGVAFIDPVPEAGILTHVRIYKITMEQFNDVLSQEN--PGRVERSWMTGRHIAQLK 491
Query: 560 NKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFPLRAPAPPYTNTL 619
+ L+ ++ WY V YLG++ G+PILT TC S + KF+SGEF AP Y N +
Sbjct: 492 KESRHFLDIFEDEWYGTVKYLGEKDGLPILTFTCPESHMKKFRSGEFGTFAPPESYRNVI 551
Query: 620 IKGLVEGKQLSEEEAKAYIHEA 641
+ GLVE L+EE+A Y+ A
Sbjct: 552 VHGLVEDLGLTEEQAHDYVSSA 573
>gi|147775373|emb|CAN77962.1| hypothetical protein VITISV_022948 [Vitis vinifera]
Length = 345
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 178/263 (67%), Positives = 209/263 (79%), Gaps = 8/263 (3%)
Query: 389 MISSSDSEDED-----TKVETLEAVLQVALSKLKVDDGHAELGMATPWRSELSKVDVFYA 443
+++SSDSEDE E LEAV+Q LSKLKVD+ +L +AT WRSELSK+DV+YA
Sbjct: 86 LVASSDSEDESDIDLHIXAENLEAVVQDGLSKLKVDEDSHDL-VAT-WRSELSKIDVWYA 143
Query: 444 SFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGP 503
SFGSN WKSRFLCYIEGGQ+EGM+K CSGS DRNPPKEI+WKT PH LFFG D S WGP
Sbjct: 144 SFGSNXWKSRFLCYIEGGQLEGMEKRCSGSVDRNPPKEIMWKTVPHRLFFGRDHSSXWGP 203
Query: 504 GGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENVYSDDVSSPLFDTNDLNSVANKKA 563
GGVAFLNPE + + +AY+CLYRITLEQFNDVLLQEN S D+SSPLFD LNS+A+K++
Sbjct: 204 GGVAFLNPEENNQDRAYICLYRITLEQFNDVLLQENASSYDISSPLFDLVALNSIADKQS 263
Query: 564 VSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFPLRAPAPPYTNTLIKGL 623
+S+E K+GWY +V+YLGKE IPILT TC LS V FKSG+ P+ AP+ Y NT+I+GL
Sbjct: 264 ISVE-FKSGWYRSVLYLGKECDIPILTXTCPLSDVEAFKSGDLPMSAPSKEYANTIIRGL 322
Query: 624 VEGKQLSEEEAKAYIHEASTKRL 646
EGKQLSEEEA AYI EASTK L
Sbjct: 323 TEGKQLSEEEAIAYIQEASTKPL 345
>gi|147770665|emb|CAN69024.1| hypothetical protein VITISV_041025 [Vitis vinifera]
Length = 240
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 166/210 (79%), Positives = 187/210 (89%), Gaps = 1/210 (0%)
Query: 1 MEVKSGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL 60
MEV S +G +RRVGL+YD+RMCKH T DGD++PENP+RI+AIW KL++AGI QRCVV
Sbjct: 1 MEVNSEKGDR-RRRVGLVYDDRMCKHATADGDHYPENPDRIRAIWKKLESAGILQRCVVF 59
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
NAKE +DK++LSVH +HVNLIKNISSKQFDSRR+RIASK NSIY+NEGS EAAYLAAGS
Sbjct: 60 NAKEVEDKHILSVHNNHHVNLIKNISSKQFDSRRNRIASKFNSIYMNEGSLEAAYLAAGS 119
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
VI+VAE VA+G+L+SAFAIVRPPGHHAE DE MGFCLYNNVA+A SFLLNER LGI KI
Sbjct: 120 VIKVAEMVAKGDLSSAFAIVRPPGHHAEQDEPMGFCLYNNVAIATSFLLNERSGLGIKKI 179
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHR 210
LIVDWDVHHGN TQKMFWKDPRVLFFSVHR
Sbjct: 180 LIVDWDVHHGNGTQKMFWKDPRVLFFSVHR 209
>gi|340368431|ref|XP_003382755.1| PREDICTED: histone deacetylase 6-like [Amphimedon queenslandica]
Length = 604
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 165/360 (45%), Positives = 238/360 (66%), Gaps = 11/360 (3%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G++YDERM H + HPE P RI +IW +L G+ + C ++A+ A ++ +L VH
Sbjct: 39 TGIVYDERMKNHRNDNNPNHPECPERISSIWEQLVDDGVVECCRRIDARSATEQEILYVH 98
Query: 75 TENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
++ H + + +N+S ++ R A +LNSIY+N S + A LAAGSV EV + V +
Sbjct: 99 SKTHYDEMVATENMSLEKLFQR----ALRLNSIYINPSSMQCALLAAGSVCEVTKLVIDE 154
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+++ AIVRPPGHHAE +MGFC +NNVA+AA + E G+ +ILI+DWDVHHGN
Sbjct: 155 TVDNGVAIVRPPGHHAESYTSMGFCFFNNVAIAAKMAIEE---YGVKRILIIDWDVHHGN 211
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
+TQ MF+ D RVL+ S+HRH+ G FYP D+G Y +G+G G GYN+N+PW R GDA+
Sbjct: 212 ATQHMFYDDNRVLYVSLHRHDNGGFYPGGDEGDYDKVGKGKGSGYNVNIPWNLARMGDAE 271
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
Y++ + I++P+A ++ P+++I+S+GFD+ GDP+GG RVTP GY+ M +L A GKI
Sbjct: 272 YMSAFYQIIMPIAFEYQPELVIVSSGFDSGEGDPIGGYRVTPNGYAHMTHQLKSLADGKI 331
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
V+ALEGGYNL +IS+S+ A + VLL D P + S P +S I K LS +W +L
Sbjct: 332 VVALEGGYNLTTISHSMSAVVQVLLGDTPRSLES-CVPNDSALASIGNAAKCLSKYWKSL 390
>gi|383864231|ref|XP_003707583.1| PREDICTED: histone deacetylase 6-like [Megachile rotundata]
Length = 1169
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 166/409 (40%), Positives = 245/409 (59%), Gaps = 7/409 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V ++YDERM KH D HPE PNRI AI+ K Q + +RC V + A K LL V
Sbjct: 536 KVCVVYDERMLKHYDISDDSHPEKPNRISAIYKKYQTYNLLERCYVQQGRSATMKELLLV 595
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H++ +++ IK++ + + + A+ NS+YL+ + +A ++ GS+++V + V GE
Sbjct: 596 HSQEYIDKIKSVENLK-PKELSKQATSYNSVYLHSETWTSACVSTGSLLQVVDSVLNGES 654
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S AIVRPPGHHAE D A GFC++NN+++AA + + I K+LIVDWDVHHGN T
Sbjct: 655 QSGIAIVRPPGHHAEQDAACGFCIFNNISIAARYAIEFH---NIKKVLIVDWDVHHGNGT 711
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F KDP+VL+ S+HR++ G F+P + YT +G GPG G+NIN+PW GD +Y+
Sbjct: 712 QAVFEKDPKVLYISIHRYDNGAFFPNSKRANYTYVGSGPGEGFNINIPWNKKGMGDTEYI 771
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + +++P+A F P++I++SAGFDA GDPLGGC VTP Y + L A G+I+L
Sbjct: 772 AAFQQVVMPIAYQFNPELILVSAGFDACIGDPLGGCYVTPEMYGHLTHWLSSLANGRIIL 831
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
+LEGGYN+ S+S+++ C LL D S P S I V K L +WP L
Sbjct: 832 SLEGGYNINSVSHAMTICTKTLLGDPLPILESGQIPCTSAIHSINNVLKSLKQYWPNLMF 891
Query: 374 E--LPTKLTSLKAP-PAHMISSSDSEDEDTKVETLEAVLQVALSKLKVD 419
LP + KA P + ++++ ++K+ E + KL +D
Sbjct: 892 NVCLPKEKVLPKAELPCIKTNGKETKNSESKIALEEIESEKLELKLSID 940
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/327 (38%), Positives = 202/327 (61%), Gaps = 3/327 (0%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
++ GL++D+ M +H +PE P R+ + + + G+ RC ++ A+ A +K +L
Sbjct: 106 QKDTGLVFDQSMTEHECLWDPNYPECPARLTRVLQRCEQLGLISRCKLIEARLATEKEIL 165
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H++ ++++K+ + + ++SK +++Y++ + + + LA GS I + E + +G
Sbjct: 166 LKHSQKQIDILKSTDGCTDADKLELLSSKYDAVYIHPSTYKLSQLAVGSTINLIENICKG 225
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+ + AI+RPPGHHA E G+C +NNVA+AA L R L KILIVDWDVHHG
Sbjct: 226 YIQNGMAIIRPPGHHAMKSEYCGYCFFNNVAIAAESAL--RNNLA-KKILIVDWDVHHGQ 282
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
+TQ+MF+ DPRV++FS+HR E G F+P + + +G+G G GYN N+P +AD
Sbjct: 283 ATQQMFYNDPRVIYFSIHRFENGEFWPNLRESNFHFVGDGLGEGYNFNIPLNKTGMTNAD 342
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA++ +LLPVA +F PD++++SAG+DAA G P G VTP Y+ +L L+ A GK+
Sbjct: 343 YLAIFQQVLLPVAYEFQPDLVLVSAGYDAALGCPEGEMLVTPACYAHLLSSLLCLASGKV 402
Query: 312 VLALEGGYNLGSISNSVLACMNVLLED 338
+ LEGGY L S++ S + LL D
Sbjct: 403 AVVLEGGYCLKSLAESAALTLRTLLGD 429
>gi|109510484|ref|XP_228753.4| PREDICTED: histone deacetylase 6 [Rattus norvegicus]
gi|109511550|ref|XP_001057931.1| PREDICTED: histone deacetylase 6 isoform 1 [Rattus norvegicus]
gi|392343069|ref|XP_003754788.1| PREDICTED: histone deacetylase 6 isoform 2 [Rattus norvegicus]
gi|392355490|ref|XP_003752058.1| PREDICTED: histone deacetylase 6-like [Rattus norvegicus]
Length = 1152
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/368 (45%), Positives = 230/368 (62%), Gaps = 17/368 (4%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDERM H ++HPE P RI I L+ G+ RC++L A+ A D L
Sbjct: 476 LQNRTGLVYDERMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSEL 535
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R + SIY+ + A LA G+ + E V
Sbjct: 536 LTCHSAEYVERLR--ATEKMKTRDLHREGANFESIYICPSTFACAQLATGAACRLVEAVL 593
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA--SFLLNERPELGINKILIVDWDV 187
GE+ + AIVRPPGHHAEPD A GFC +N+VAVAA + ++ R +ILIVDWDV
Sbjct: 594 SGEVLNGIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQVIAGR----ALRILIVDWDV 649
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ +F +DP VL+ S+HR++ GTF+P D+G + +G G G+ +NVPW R
Sbjct: 650 HHGNGTQHIFEEDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNGPRM 709
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GDADYLA W ++LP+A +F P++++ISAGFDAA GDPLGGC+VTP GY+ + LM A
Sbjct: 710 GDADYLATWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLA 769
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP----FESTWRVIQAVRKK 363
G+I+L LEGGYNL SIS S+ AC + LL D P +S P S VIQ RK
Sbjct: 770 GGRIILILEGGYNLTSISESMAACTHSLLGDPPPQLTSLRPPQSGALASISEVIQVHRK- 828
Query: 364 LSAFWPTL 371
+W +L
Sbjct: 829 ---YWRSL 833
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + D PENP R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 85 TGLVFDEQLNDFHCLWDDSFPENPERLHAIKEQLILEGLLGRCVSFQARFAEKEELMLVH 144
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA GSV+ + + V E+
Sbjct: 145 SLEYIDLMETTQYMNEGELR-VLAGTYDSVYLHPNSYSCACLATGSVLRLVDAVMGAEIR 203
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A++RPPGHHA+ G+C++N++AVAA + + I +ILIVDWDVHHG TQ
Sbjct: 204 NGMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHR---IQRILIVDWDVHHGQGTQ 260
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 261 FIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 320
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 321 AFLHILLPVAFEFQPQLVLVAAGFDALHGDPKGEMSATPAGFAHLTHFLMGLAGGKLILS 380
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V ++ LL D S P S I + L FW L
Sbjct: 381 LEGGYNLHALAKGVSGSLHTLLGDPCPMLESPVAPCASAQTSISCTLEALEPFWEVL 437
>gi|149028424|gb|EDL83809.1| histone deacetylase 6 [Rattus norvegicus]
Length = 1012
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 167/368 (45%), Positives = 230/368 (62%), Gaps = 17/368 (4%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDERM H ++HPE P RI I L+ G+ RC++L A+ A D L
Sbjct: 336 LQNRTGLVYDERMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSEL 395
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R + SIY+ + A LA G+ + E V
Sbjct: 396 LTCHSAEYVERLR--ATEKMKTRDLHREGANFESIYICPSTFACAQLATGAACRLVEAVL 453
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA--SFLLNERPELGINKILIVDWDV 187
GE+ + AIVRPPGHHAEPD A GFC +N+VAVAA + ++ R +ILIVDWDV
Sbjct: 454 SGEVLNGIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQVIAGRAL----RILIVDWDV 509
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ +F +DP VL+ S+HR++ GTF+P D+G + +G G G+ +NVPW R
Sbjct: 510 HHGNGTQHIFEEDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNGPRM 569
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GDADYLA W ++LP+A +F P++++ISAGFDAA GDPLGGC+VTP GY+ + LM A
Sbjct: 570 GDADYLATWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLA 629
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP----FESTWRVIQAVRKK 363
G+I+L LEGGYNL SIS S+ AC + LL D P +S P S VIQ RK
Sbjct: 630 GGRIILILEGGYNLTSISESMAACTHSLLGDPPPQLTSLRPPQSGALASISEVIQVHRK- 688
Query: 364 LSAFWPTL 371
+W +L
Sbjct: 689 ---YWRSL 693
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 174/299 (58%), Gaps = 4/299 (1%)
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +++L++ R +A +S+YL+ S A LA GSV+ + + V E
Sbjct: 3 VHSLEYIDLMETTQYMNEGELR-VLAGTYDSVYLHPNSYSCACLATGSVLRLVDAVMGAE 61
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A++RPPGHHA+ G+C++N++AVAA + + I +ILIVDWDVHHG
Sbjct: 62 IRNGMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHR---IQRILIVDWDVHHGQG 118
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY
Sbjct: 119 TQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADY 178
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++
Sbjct: 179 IAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKGEMSATPAGFAHLTHFLMGLAGGKLI 238
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
L+LEGGYNL +++ V ++ LL D S P S I + L FW L
Sbjct: 239 LSLEGGYNLHALAKGVSGSLHTLLGDPCPMLESPVAPCASAQTSISCTLEALEPFWEVL 297
>gi|344250000|gb|EGW06104.1| Histone deacetylase 6 [Cricetulus griseus]
Length = 666
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 251/423 (59%), Gaps = 36/423 (8%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDE+M H ++HPE P RI I L+ G+ RC++L + A D L
Sbjct: 7 LQDRTGLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLTARCLILPVRPAMDAEL 66
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V+ ++ ++++ +R R + +SIY+ + A LA G+ + E V
Sbjct: 67 LACHSAEYVDRVR--ATEKMKTRELHREGANFDSIYICPSTFACAQLATGAACCLVEAVL 124
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
G++ + AIVRPPGHHAEPD A GFC +N+VAVAA R I +ILIVDW
Sbjct: 125 SGQVLNGIAIVRPPGHHAEPDAACGFCFFNSVAVAA------RHAQAIAGRALRILIVDW 178
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ SVHR++ GTF+P D+G + +G G+G+ +NVPW
Sbjct: 179 DVHHGNGTQHMFEDDPSVLYVSVHRYDHGTFFPMGDEGASSQVGRAAGIGFTVNVPWNGP 238
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYL W ++LP+A +F P+++++SAGFDAA GDPLGGC+VTP GY+ + LM
Sbjct: 239 RMGDADYLTAWHRLVLPIAYEFNPELVLVSAGFDAAQGDPLGGCQVTPEGYAHLTHLLMG 298
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP-------------VAGSSEAYPFES 352
A G+I+L LEGGYNL SIS S+ AC + LL D P +A +E
Sbjct: 299 LANGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQPGALASITETIQVHR 358
Query: 353 T-WRVIQAV----RKKLSAFWPTLADEL-PTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
WR ++ + +++ S+ P + + + P +T+ P +S+ +S + K ET +
Sbjct: 359 RYWRSLRMMKMEDKEECSSSKPKMTNPVSPMGVTT----PKEAVSAKESTLGNAKSETAK 414
Query: 407 AVL 409
AVL
Sbjct: 415 AVL 417
>gi|354485959|ref|XP_003505149.1| PREDICTED: histone deacetylase 6-like [Cricetulus griseus]
Length = 1135
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 251/423 (59%), Gaps = 36/423 (8%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDE+M H ++HPE P RI I L+ G+ RC++L + A D L
Sbjct: 476 LQDRTGLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLTARCLILPVRPAMDAEL 535
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V+ ++ ++++ +R R + +SIY+ + A LA G+ + E V
Sbjct: 536 LACHSAEYVDRVR--ATEKMKTRELHREGANFDSIYICPSTFACAQLATGAACCLVEAVL 593
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
G++ + AIVRPPGHHAEPD A GFC +N+VAVAA R I +ILIVDW
Sbjct: 594 SGQVLNGIAIVRPPGHHAEPDAACGFCFFNSVAVAA------RHAQAIAGRALRILIVDW 647
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ SVHR++ GTF+P D+G + +G G+G+ +NVPW
Sbjct: 648 DVHHGNGTQHMFEDDPSVLYVSVHRYDHGTFFPMGDEGASSQVGRAAGIGFTVNVPWNGP 707
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYL W ++LP+A +F P+++++SAGFDAA GDPLGGC+VTP GY+ + LM
Sbjct: 708 RMGDADYLTAWHRLVLPIAYEFNPELVLVSAGFDAAQGDPLGGCQVTPEGYAHLTHLLMG 767
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP-------------VAGSSEAYPFES 352
A G+I+L LEGGYNL SIS S+ AC + LL D P +A +E
Sbjct: 768 LANGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQPGALASITETIQVHR 827
Query: 353 T-WRVIQAV----RKKLSAFWPTLADEL-PTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
WR ++ + +++ S+ P + + + P +T+ P +S+ +S + K ET +
Sbjct: 828 RYWRSLRMMKMEDKEECSSSKPKMTNPVSPMGVTT----PKEAVSAKESTLGNAKSETAK 883
Query: 407 AVL 409
AVL
Sbjct: 884 AVL 886
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 210/358 (58%), Gaps = 6/358 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + D PE P R+ AI +L + RCV A+ A+ + L+SVH
Sbjct: 85 TGLVFDEQLNDFHCLWDDSFPECPERLHAIKEQLILESLLDRCVSFQARFAEKEELMSVH 144
Query: 75 TENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ +++L++ +++ + RI A +S+YL+ S A LA GSV+ + + V E+
Sbjct: 145 SLEYIDLME--TTQYMNEGELRILADTYDSVYLHPNSYSCACLATGSVLRLVDAVLGAEI 202
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ A++RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG T
Sbjct: 203 RNGMAVIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKH---RIQRVLIVDWDVHHGQGT 259
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+
Sbjct: 260 QFIFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYI 319
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L
Sbjct: 320 AAFLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAHLTHFLMGLAGGKVIL 379
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+LEGGYNL +++ V A ++ LL D S P S I + L FW L
Sbjct: 380 SLEGGYNLHALAKGVSASLHTLLGDPCPMLESPGAPCASAQTSISCTLEALEPFWEIL 437
>gi|443704318|gb|ELU01419.1| hypothetical protein CAPTEDRAFT_126869 [Capitella teleta]
Length = 802
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 226/369 (61%), Gaps = 19/369 (5%)
Query: 10 TIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
+ R ++YD +M H + HPE P+RI I+ KL+ G+ +RC VL ++ A +
Sbjct: 433 VVLNRTCVVYDPQMRLHKSTSMQNHPERPDRISRIYQKLKDCGLVERCKVLPSRAATIEE 492
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+L HT +HV ++ + + NS+YL++ + + A +A G + V + +A
Sbjct: 493 ILLAHTSDHVKRVEEFQDLSLEELHS-LECDFNSVYLSQEAYQCARIAVGCTLNVVDEIA 551
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
G+ + A++RPPGHHAE D MGFC +NNVA+AA + + E G+ KILI+DWDVHH
Sbjct: 552 TGQSCNGVAVIRPPGHHAEEDRPMGFCYFNNVAIAARY---AQKEHGLKKILILDWDVHH 608
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ +F DP VL+ S+HR + G F+P DD + +G G G G+NIN+PWE G GD
Sbjct: 609 GNGTQHIFDHDPSVLYISIHRRDNGFFFPMGDDNDFYQVGLGGGEGFNINIPWEMGGMGD 668
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
++Y+A + I++PVA +F PD+++ISAGFDAA GDPLGGC +TP GY+ + L A G
Sbjct: 669 SEYIATFQQIVMPVAYEFNPDLVLISAGFDAAKGDPLGGCAITPEGYAHLTHMLTGLAHG 728
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLED-------KPVAGSSEAYPFESTWRVIQAVRK 362
+++LALEGGYNL SIS S+ +C ++LL+D PV +S R IQ+ K
Sbjct: 729 RVILALEGGYNLNSISESMASCTSILLDDLCPPLVVNPVK--------KSAARSIQSTIK 780
Query: 363 KLSAFWPTL 371
FW +L
Sbjct: 781 VHQNFWQSL 789
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 220/360 (61%), Gaps = 11/360 (3%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+YD+RM K D + ENP+R+ I L + G+ Q C + A+ A + +L+VH
Sbjct: 48 TGLVYDDRMLKTRCLWDDGYAENPHRLTVIHEALLSHGLLQECCQIPARLATEAEILAVH 107
Query: 75 TENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ +++ + ISS++ + +++ +++ ++ + + E+A LAAGS +++ E++ E +L
Sbjct: 108 SPEYLHQV--ISSQKMEKNELMKLSERMDGVFFHPSTYESASLAAGSTVDLVEQIVEKKL 165
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ FA+VRPPGHHA+ EA G C++NNVA+AA L+ L +N+ILIVDWDVHHG T
Sbjct: 166 RNGFAVVRPPGHHAQHTEANGNCIFNNVAIAAQHALDN---LSVNRILIVDWDVHHGQGT 222
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q+ F+ DPRVL FS+HR+E G F+P + Y IG+G GL YNINVP DADYL
Sbjct: 223 QRAFYHDPRVLCFSIHRYEEGEFWPNLRESNYDQIGKGKGLKYNINVPINQTGSTDADYL 282
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A ILLPVA ++ P ++I+S GFDAA GD G VTP GY+ ML LM A+G++ +
Sbjct: 283 AFIQQILLPVAYEYSPQLVIVSGGFDAAVGDAEGKGYVTPAGYAAMLHMLMSLAEGRVAV 342
Query: 314 ALEGGYNLGSISNSVLACMNVLL-EDKPVAGSSEAYPFE----STWRVIQAVRKKLSAFW 368
LEGGY L S++ S C+ LL P + + ST + I V + L FW
Sbjct: 343 VLEGGYCLPSLAESSALCVRTLLGHPCPQLSDQSTHHLDAFIRSTVKTILNVIRVLRPFW 402
>gi|27370650|gb|AAH41105.1| Hdac6 protein [Mus musculus]
Length = 1152
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/367 (44%), Positives = 226/367 (61%), Gaps = 15/367 (4%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDE+M H ++HPE P RI I L+ G+ RC++L A+ A D L
Sbjct: 479 LQNRTGLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSEL 538
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ +V ++ + K R + +SIY+ + A LA G+ + E V
Sbjct: 539 LTCHSAEYVEHLRT-TEKMKTRDLHREGANFDSIYICPSTFACAKLATGAACRLVEAVLS 597
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASF--LLNERPELGINKILIVDWDVH 188
GE+ + A+VRPPGHHAEP+ A GFC +N+VAVAA ++ R +ILIVDWDVH
Sbjct: 598 GEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGR----ALRILIVDWDVH 653
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ +F DP VL+ S+HR++ GTF+P D+G + +G G+G+ +NVPW R G
Sbjct: 654 HGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMG 713
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DADYLA W ++LP+A +F P++++ISAGFDAA GDPLGGC+VTP GY+ + LM A
Sbjct: 714 DADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAG 773
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKP----VAGSSEAYPFESTWRVIQAVRKKL 364
G+I+L LEGGYNL SIS S+ AC + LL D P + ++ S VIQ RK
Sbjct: 774 GRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQSGALVSISEVIQVHRK-- 831
Query: 365 SAFWPTL 371
+W +L
Sbjct: 832 --YWRSL 836
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/360 (38%), Positives = 209/360 (58%), Gaps = 7/360 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + D PE+P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 85 TGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQARFAEKEELMLVH 144
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA GSV+ + + + E+
Sbjct: 145 SLEYIDLMETTQYMNEGELR-VLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEIR 203
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A++RPPGHHA+ + G+C++N++AVAA + + I ++LIVDWDVHHG TQ
Sbjct: 204 NGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKH---RIQRVLIVDWDVHHGQGTQ 260
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F +DP VL+FS+HR+E G F+P ++ IG G G GY INVPW DADY+A
Sbjct: 261 FIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIA 320
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDP---LGGCRVTPYGYSVMLKKLMDFAQGKI 311
+ HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK+
Sbjct: 321 AFLHILLPVASEFQPQLVLVAAGFDALHGDPKSLQGEMAATPAGFAHLTHLLMGLAGGKL 380
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+L+LEGGYNL +++ V A ++ LL D S P S I + L FW L
Sbjct: 381 ILSLEGGYNLRALAKGVSASLHTLLGDPCPMLESCVVPCASAQTSIYCTLEALEPFWEVL 440
>gi|74152172|dbj|BAE32376.1| unnamed protein product [Mus musculus]
Length = 1149
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/367 (44%), Positives = 226/367 (61%), Gaps = 15/367 (4%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDE+M H ++HPE P RI I L+ G+ RC++L A+ A D L
Sbjct: 476 LQNRTGLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSEL 535
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ +V ++ + K R + +SIY+ + A LA G+ + E V
Sbjct: 536 LTCHSAEYVEHLRT-TEKMKTRDLHREGANFDSIYICPSTFACAKLATGAACRLVEAVLS 594
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASF--LLNERPELGINKILIVDWDVH 188
GE+ + A+VRPPGHHAEP+ A GFC +N+VAVAA ++ R +ILIVDWDVH
Sbjct: 595 GEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGR----ALRILIVDWDVH 650
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ +F DP VL+ S+HR++ GTF+P D+G + +G G+G+ +NVPW R G
Sbjct: 651 HGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMG 710
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DADYLA W ++LP+A +F P++++ISAGFDAA GDPLGGC+VTP GY+ + LM A
Sbjct: 711 DADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAG 770
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKP----VAGSSEAYPFESTWRVIQAVRKKL 364
G+I+L LEGGYNL SIS S+ AC + LL D P + ++ S VIQ RK
Sbjct: 771 GRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQSGALVSISEVIQVHRK-- 828
Query: 365 SAFWPTL 371
+W +L
Sbjct: 829 --YWRSL 833
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 209/357 (58%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + D PE+P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 85 TGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQARFAEKEELMLVH 144
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA GSV+ + + + E+
Sbjct: 145 SLEYIDLMETTQYMNEGELR-VLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEIR 203
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A++RPPGHHA+ + G+C++N++AVAA + + I ++LIVDWDVHHG TQ
Sbjct: 204 NGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKH---RIQRVLIVDWDVHHGQGTQ 260
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F +DP VL+FS+HR+E G F+P ++ IG G G GY INVPW DADY+A
Sbjct: 261 FIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIA 320
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 321 AFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLAGGKLILS 380
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S I + L FW L
Sbjct: 381 LEGGYNLRALAKGVSASLHTLLGDPCPMLESCVVPCASAQTSIYCTLEALEPFWEVL 437
>gi|194353997|ref|NP_034543.3| histone deacetylase 6 [Mus musculus]
gi|194353999|ref|NP_001123888.1| histone deacetylase 6 [Mus musculus]
gi|341941079|sp|Q9Z2V5.3|HDAC6_MOUSE RecName: Full=Histone deacetylase 6; Short=HD6; AltName:
Full=Histone deacetylase mHDA2
Length = 1149
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/367 (44%), Positives = 226/367 (61%), Gaps = 15/367 (4%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDE+M H ++HPE P RI I L+ G+ RC++L A+ A D L
Sbjct: 476 LQNRTGLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSEL 535
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ +V ++ + K R + +SIY+ + A LA G+ + E V
Sbjct: 536 LTCHSAEYVEHLRT-TEKMKTRDLHREGANFDSIYICPSTFACAKLATGAACRLVEAVLS 594
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASF--LLNERPELGINKILIVDWDVH 188
GE+ + A+VRPPGHHAEP+ A GFC +N+VAVAA ++ R +ILIVDWDVH
Sbjct: 595 GEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGR----ALRILIVDWDVH 650
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ +F DP VL+ S+HR++ GTF+P D+G + +G G+G+ +NVPW R G
Sbjct: 651 HGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMG 710
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DADYLA W ++LP+A +F P++++ISAGFDAA GDPLGGC+VTP GY+ + LM A
Sbjct: 711 DADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAG 770
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKP----VAGSSEAYPFESTWRVIQAVRKKL 364
G+I+L LEGGYNL SIS S+ AC + LL D P + ++ S VIQ RK
Sbjct: 771 GRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQSGALVSISEVIQVHRK-- 828
Query: 365 SAFWPTL 371
+W +L
Sbjct: 829 --YWRSL 833
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 209/357 (58%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + D PE+P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 85 TGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQARFAEKEELMLVH 144
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA GSV+ + + + E+
Sbjct: 145 SLEYIDLMETTQYMNEGELR-VLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEIR 203
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A++RPPGHHA+ + G+C++N++AVAA + + I ++LIVDWDVHHG TQ
Sbjct: 204 NGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKH---RIQRVLIVDWDVHHGQGTQ 260
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F +DP VL+FS+HR+E G F+P ++ IG G G GY INVPW DADY+A
Sbjct: 261 FIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIA 320
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 321 AFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLAGGKLILS 380
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S I + L FW L
Sbjct: 381 LEGGYNLRALAKGVSASLHTLLGDPCPMLESCVVPCASAQTSIYCTLEALEPFWEVL 437
>gi|74195299|dbj|BAE28372.1| unnamed protein product [Mus musculus]
Length = 1009
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/367 (44%), Positives = 227/367 (61%), Gaps = 15/367 (4%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDE+M H ++HPE P RI I L+ G+ RC++L A+ A D L
Sbjct: 476 LQNRTGLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSEL 535
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ +V ++ + K R + +SIY+ + A LA G+ + E V
Sbjct: 536 LTCHSAEYVEHLRT-TEKMKTRDLHREGANFDSIYICPSTFACAKLATGAACRLVEAVLS 594
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA--SFLLNERPELGINKILIVDWDVH 188
GE+ + A+VRPPGHHAEP+ A GFC +N+VAVAA + ++ R +ILIVDWDVH
Sbjct: 595 GEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGR----ALRILIVDWDVH 650
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ +F DP VL+ S+HR++ GTF+P D+G + +G G+G+ +NVPW R G
Sbjct: 651 HGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMG 710
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DADYLA W ++LP+A +F P++++ISAGFDAA GDPLGGC+VTP GY+ + LM A
Sbjct: 711 DADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAG 770
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKP----VAGSSEAYPFESTWRVIQAVRKKL 364
G+I+L LEGGYNL SIS S+ AC + LL D P + ++ S VIQ RK
Sbjct: 771 GRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQSGALVSISEVIQVHRK-- 828
Query: 365 SAFWPTL 371
+W +L
Sbjct: 829 --YWRSL 833
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 209/357 (58%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + D PE+P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 85 TGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQARFAEKEELMLVH 144
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA GSV+ + + + E+
Sbjct: 145 SLEYIDLMETTQYMNEGELR-VLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEIR 203
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A++RPPGHHA+ + G+C++N++AVAA + + I ++LIVDWDVHHG TQ
Sbjct: 204 NGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKH---RIQRVLIVDWDVHHGQGTQ 260
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F +DP VL+FS+HR+E G F+P ++ IG G G GY INVPW DADY+A
Sbjct: 261 FIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIA 320
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 321 AFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLAGGKLILS 380
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S I + L FW L
Sbjct: 381 LEGGYNLRALAKGVSASLHTLLGDPCPMLESCVVPCASAQTSIYCTLEALEPFWEVL 437
>gi|6978316|gb|AAD09835.2| histone deacetylase mHDA2 [Mus musculus]
Length = 1149
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/367 (43%), Positives = 226/367 (61%), Gaps = 15/367 (4%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDE+M H ++HPE P RI I L+ G+ RC++L A+ A L
Sbjct: 476 LQNRTGLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALGSEL 535
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ +V ++ + K R + +SIY+ + A LA G+ + E V
Sbjct: 536 LTCHSAEYVEHLRT-TEKMKTRDLHREGANFDSIYICPSTFACAKLATGAACRLVEAVLS 594
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA--SFLLNERPELGINKILIVDWDVH 188
GE+ + A+VRPPGHHAEP+ A GFC +N+VAVAA + ++ R +ILIVDWDVH
Sbjct: 595 GEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRAL----RILIVDWDVH 650
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ +F DP VL+ S+HR++ GTF+P D+G + +G G+G+ +NVPW R G
Sbjct: 651 HGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMG 710
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DADYLA W ++LP+A +F P++++ISAGFDAA GDPLGGC+VTP GY+ + LM A
Sbjct: 711 DADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAG 770
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKP----VAGSSEAYPFESTWRVIQAVRKKL 364
G+I+L LEGGYNL SIS S+ AC + LL D P + ++ S VIQ RK
Sbjct: 771 GRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQSGALVSISEVIQVHRK-- 828
Query: 365 SAFWPTL 371
+W +L
Sbjct: 829 --YWRSL 833
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 208/357 (58%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + D PE+P R+ AI +L G+ RCV A A+ + L+ VH
Sbjct: 85 TGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQAWFAEKEELMLVH 144
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA GSV+ + + + E+
Sbjct: 145 SLEYIDLMETTQYMNEGELR-VLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEIR 203
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A++RPPGHHA+ + G+C++N++AVAA + + I ++LIVDWDVHHG TQ
Sbjct: 204 NGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKH---RIQRVLIVDWDVHHGQGTQ 260
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F +DP VL+FS+HR+E G F+P ++ IG G G GY INVPW DADY+A
Sbjct: 261 FIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIA 320
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 321 AFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLAGGKLILS 380
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ + A ++ LL D S P S I + L FW L
Sbjct: 381 LEGGYNLRALAKGISASLHTLLGDPCPMLESCVVPCASAQISIYCTLEALEPFWEVL 437
>gi|307212499|gb|EFN88230.1| Histone deacetylase 6 [Harpegnathos saltator]
Length = 1136
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 237/391 (60%), Gaps = 7/391 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V ++YDERM KH + HPE P RI +I+ + + +RC +L+ + A + L V
Sbjct: 484 KVCIVYDERMLKHCNISDNSHPEKPTRISSIYRNHEEYNLLERCYLLHGRCATIEELSLV 543
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H++++++ IK+I + + D+ A+ NS+Y + + +A ++ GS++++ + V GE
Sbjct: 544 HSKDYIDSIKSIMTLKL-KELDKEAAGYNSVYFHNETWSSACISVGSLLQIVDAVLNGES 602
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S AIVRPPGHHAE D A GFC++NNVAVAA + + + K+LIVDWDVHHGN T
Sbjct: 603 QSGVAIVRPPGHHAEEDAACGFCIFNNVAVAAKYAIQFH---HVKKVLIVDWDVHHGNGT 659
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +DP+VL+ SVHR++ G+F+P++ D YT +G G G+N+NVPW GD +Y+
Sbjct: 660 QAIFEEDPKVLYTSVHRYDNGSFFPSSKDANYTSVGLNAGEGFNVNVPWNKKGMGDVEYI 719
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + +++P+A F P++++ISAGFDA GDPLGGC P Y + L A G+++L
Sbjct: 720 AAFQQVIMPIAYQFNPELVLISAGFDACVGDPLGGCHTNPELYGHLTHWLSSLANGRVIL 779
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
+LEGGYN+ SIS+++ C LL D P+ G + P S I V K FWP L
Sbjct: 780 SLEGGYNINSISHAMTMCTKALLGDPLPMLGPGQV-PCTSAINSINNVLKTHKKFWPNLQ 838
Query: 373 DELPTKLTSLKAPPAHMISSSDSEDEDTKVE 403
+ L P MIS +S D K+E
Sbjct: 839 YGMSLPKEKL-LPKLKMISKRESSKRDKKLE 868
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 189/308 (61%), Gaps = 5/308 (1%)
Query: 11 IKRRVGLLYDERMCKHNTP-DGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
I + GL++D M +H D DY E P R + + + G+ QRC ++ A+ A +
Sbjct: 60 IHKDTGLVFDRSMAEHECLWDLDY-AECPARFTQVLQRCEELGLVQRCKLIKARLATENE 118
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+L H++ H++++K + ++SK +SIY++ + + LA GS I + E +
Sbjct: 119 ILMKHSQKHIDILKATDGCMDSENLELLSSKYDSIYVHPSTYRLSLLATGSTINLIESIC 178
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
+G++ + AIVRPPGHHA E G+C +NNVA+AA L +KILIVDWDVHH
Sbjct: 179 KGKVQNGMAIVRPPGHHAMKSEYCGYCFFNNVALAAEKALTSN---WASKILIVDWDVHH 235
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
G +TQ+MF+ DPRV++FS+HR+E+G F+P + + +GE G G+N N+P +
Sbjct: 236 GQATQQMFYNDPRVVYFSIHRYEYGEFWPNLRESDFHNVGEDLGEGFNFNIPLNKTGMTN 295
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
ADY+AV+ ILLP+A +F PD++I+SAG+DAA G P G VTP YS +L L+ A G
Sbjct: 296 ADYIAVFQQILLPMAYEFQPDLVIVSAGYDAALGCPEGEMLVTPACYSHLLSSLLSLAAG 355
Query: 310 KIVLALEG 317
K+ + LEG
Sbjct: 356 KVAVLLEG 363
>gi|255722335|ref|XP_002546102.1| histone deacetylase HDA1 [Candida tropicalis MYA-3404]
gi|240136591|gb|EER36144.1| histone deacetylase HDA1 [Candida tropicalis MYA-3404]
Length = 849
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/387 (43%), Positives = 229/387 (59%), Gaps = 21/387 (5%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV----- 59
I + GL+YD RM H Y HPE+P RI I+ +L AG+ Q +
Sbjct: 138 IPLKTGLVYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKRLVEAGLVQDSSLSGVDE 197
Query: 60 -------LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSE 112
+ +EA + +L VH+E+H+N I+N S D + K +SIY+N S
Sbjct: 198 IGPFMLKIPIREATTEEILEVHSESHLNFIQNTESMSRDQLLEE-TEKGDSIYVNNDSYL 256
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG++ ++ A+VRPPGHHAEPD GFCL++NVAVAA +L
Sbjct: 257 SAKLSCGGTIEACKAVIEGKVKNSLAVVRPPGHHAEPDTPAGFCLFSNVAVAAKNILKNY 316
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + +I+IVDWD+HHGN TQK F+ DPRVL+ S+HR+E G FYP G +GEGP
Sbjct: 317 PE-SVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRYENGKFYPGTKYGNSDQVGEGP 375
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G GYNIN+PW + D DY+ ++ ILLP +F PD+II+S+GFDAA GD +GGC V+
Sbjct: 376 GEGYNINIPWRSMGMHDGDYVYAFNKILLPAITEFDPDLIIVSSGFDAADGDVIGGCHVS 435
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL SI+ S LA VL+ + P + P
Sbjct: 436 PSGYGYMTHMLKGIAKGKMAVVLEGGYNLDSIAKSALAVAKVLVGEPP-ESTITLLPHLE 494
Query: 353 TWRVIQAVRKKLSAFWPTLADELPTKL 379
T V+ V K S ++ +L +P K+
Sbjct: 495 TIEVVDEVIKIQSKYFKSLRHGIPEKI 521
>gi|301764785|ref|XP_002917832.1| PREDICTED: histone deacetylase 6-like [Ailuropoda melanoleuca]
Length = 1207
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 157/365 (43%), Positives = 220/365 (60%), Gaps = 11/365 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+RM H ++HPE P R+ I +L+ G+ RC+ L A+ A D L
Sbjct: 523 LQARTGLVYDQRMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPARPATDSEL 582
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ +V ++ ++K R S +SIY+ G+ A LA G+ + E V
Sbjct: 583 LTCHSAEYVGRLR-ATAKMKTRELHREGSNFDSIYICPGTFACAQLATGATCRLVEAVLA 641
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDWD 186
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDWD
Sbjct: 642 GEVLNGAAVVRPPGHHAERDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDWD 695
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHGN TQ +F +DP VL+ S+HR++ GTF+P D+G + +G G G+ +NV W R
Sbjct: 696 VHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQMGRAAGTGFTVNVAWNGPR 755
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 756 VGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGL 815
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSA 366
A G+I+L LEGGYNL SIS S+ AC LL D P + P I +
Sbjct: 816 ANGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLARPPLSGALASITETIQVHRR 875
Query: 367 FWPTL 371
+W +L
Sbjct: 876 YWRSL 880
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/358 (39%), Positives = 211/358 (58%), Gaps = 6/358 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 133 TGLVFDEQLNEFHCLWDDSFPECPERLHAIKQQLIQEGLVDRCVSFQARFAEKEELMLVH 192
Query: 75 TENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ +++L++ +++ + RI A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 193 SLEYIDLME--TTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGNEI 250
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG T
Sbjct: 251 RNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKH---AIQRVLIVDWDVHHGQGT 307
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F +DP VL+FS+HR+E G F+P ++ +G G G GY INVPW DADY+
Sbjct: 308 QFAFDRDPSVLYFSIHRYEQGRFWPHLKASNWSTVGFGRGQGYTINVPWNQVGMRDADYI 367
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L
Sbjct: 368 AAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLIL 427
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+LEGGYN S++ V A ++ LL D S P S + + L FW L
Sbjct: 428 SLEGGYNFRSLAEGVSASLHTLLGDPCPILESPGAPCWSAQASLSCALEALEPFWEVL 485
>gi|281353654|gb|EFB29238.1| hypothetical protein PANDA_006175 [Ailuropoda melanoleuca]
Length = 1160
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 157/365 (43%), Positives = 220/365 (60%), Gaps = 11/365 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+RM H ++HPE P R+ I +L+ G+ RC+ L A+ A D L
Sbjct: 476 LQARTGLVYDQRMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPARPATDSEL 535
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ +V ++ ++K R S +SIY+ G+ A LA G+ + E V
Sbjct: 536 LTCHSAEYVGRLR-ATAKMKTRELHREGSNFDSIYICPGTFACAQLATGATCRLVEAVLA 594
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDWD 186
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDWD
Sbjct: 595 GEVLNGAAVVRPPGHHAERDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDWD 648
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHGN TQ +F +DP VL+ S+HR++ GTF+P D+G + +G G G+ +NV W R
Sbjct: 649 VHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQMGRAAGTGFTVNVAWNGPR 708
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 VGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGL 768
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSA 366
A G+I+L LEGGYNL SIS S+ AC LL D P + P I +
Sbjct: 769 ANGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLARPPLSGALASITETIQVHRR 828
Query: 367 FWPTL 371
+W +L
Sbjct: 829 YWRSL 833
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/358 (39%), Positives = 211/358 (58%), Gaps = 6/358 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVFDEQLNEFHCLWDDSFPECPERLHAIKQQLIQEGLVDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ +++L++ +++ + RI A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLME--TTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGNEI 203
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG T
Sbjct: 204 RNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKH---AIQRVLIVDWDVHHGQGT 260
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F +DP VL+FS+HR+E G F+P ++ +G G G GY INVPW DADY+
Sbjct: 261 QFAFDRDPSVLYFSIHRYEQGRFWPHLKASNWSTVGFGRGQGYTINVPWNQVGMRDADYI 320
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L
Sbjct: 321 AAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLIL 380
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+LEGGYN S++ V A ++ LL D S P S + + L FW L
Sbjct: 381 SLEGGYNFRSLAEGVSASLHTLLGDPCPILESPGAPCWSAQASLSCALEALEPFWEVL 438
>gi|291407454|ref|XP_002719913.1| PREDICTED: histone deacetylase 6-like [Oryctolagus cuniculus]
Length = 1245
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/367 (43%), Positives = 223/367 (60%), Gaps = 17/367 (4%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+RM H ++HPE P RI I L+ G+ RC+ L A+ A D L
Sbjct: 523 LQARTGLVYDQRMMSHCNLWDNHHPETPQRILRIMCHLEELGLAGRCLNLPARPATDAEL 582
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V I+ ++++ +R R + +SIY+ + A LA G+V + E V
Sbjct: 583 LTCHSAEYVERIR--ATQKMKTRELHREGANFDSIYICPSTFTCAQLATGTVCRLVEAVL 640
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
EGE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ ++LIVDW
Sbjct: 641 EGEVLNGVALVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGRALRVLIVDW 694
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHGN TQ +F DP VL+ S+HR++ GTF+P D+G + +G G G+ +NV W
Sbjct: 695 DIHHGNGTQHIFEDDPSVLYISLHRYDQGTFFPVGDEGACSQMGRAAGTGFTVNVAWNGS 754
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYL W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 755 RIGDADYLMAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 814
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP----VAGSSEAYPFESTWRVIQAVR 361
A G+I+L LEGGYNL SIS S+ AC LL D P + ++ S IQ R
Sbjct: 815 LAGGRIILILEGGYNLTSISESMAACTRSLLGDPPPMLALLRPPQSGALASITETIQVHR 874
Query: 362 KKLSAFW 368
K + W
Sbjct: 875 KYWRSLW 881
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 214/363 (58%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++D+++ + + D PE P R+ AI +L G+ RCV +A+ A+ + L+ VH
Sbjct: 132 TGLVFDDQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFHARFAEKEELMLVH 191
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L+++ + R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 192 SLEYIDLMESTQYMKEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 250
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + GI ++LIVDWD+HHG TQ
Sbjct: 251 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKH---GIQRVLIVDWDIHHGQGTQ 307
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
MF +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 308 FMFDQDPSVLYFSIHRYEQGRFWPHLPASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 367
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 368 AFLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 427
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL S++ V A ++ LL D S P +S + L FW L
Sbjct: 428 LEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGIPCQSAQNSLSCTLGALEPFWEFLVRS 487
Query: 375 LPT 377
+ T
Sbjct: 488 VET 490
>gi|148222822|ref|NP_001080486.1| histone deacetylase 6 [Xenopus laevis]
gi|27882614|gb|AAH43813.1| Hdac6-prov protein [Xenopus laevis]
Length = 1286
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/364 (42%), Positives = 224/364 (61%), Gaps = 8/364 (2%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
++R L+YDE+M +H YHPE+P RI I+ + + G+ +RC L ++ A K L
Sbjct: 479 EQRTALVYDEQMMEHRNMWDCYHPESPQRINQIFKRHKDLGLLERCSRLPSRLATQKELQ 538
Query: 72 SVHTENHVNLIKNISSKQFDSRRD--RIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
H+ ++ I+ I + RD R+ + NSIY+N S +A LAAGS V E V
Sbjct: 539 MCHS---LSYIQKIEASAHMKPRDLHRLGDEYNSIYINSKSYHSARLAAGSTFNVVEAVV 595
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL--LNERPELGINKILIVDWDV 187
G+ + IVRPPGHHAEP EA GFC +N VA+AA + L + E + +++I+DWDV
Sbjct: 596 TGKAQNGIGIVRPPGHHAEPGEACGFCFFNTVALAARYAQRLQSQSEDPL-RVMILDWDV 654
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ +F +D VL+ S+HR++ G F+P ++D + +G G G GYN+N+PW G+
Sbjct: 655 HHGNGTQHIFQEDASVLYMSLHRYDEGLFFPNSEDASHDKVGIGKGAGYNVNIPWNGGKM 714
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GD +YL + +++P+A +F P +++ISAGFDAA GDPLGGC+V+P GY+ M LM A
Sbjct: 715 GDVEYLMAFHRVVMPIAYEFNPQLVLISAGFDAARGDPLGGCQVSPEGYAHMTHLLMSLA 774
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAF 367
G+++L LEGGYNL SIS S++ C LL D P S P S + VR+ +
Sbjct: 775 GGRVILVLEGGYNLTSISESMVMCTRSLLGDPPPVLSDLRPPKSSALNSVCKVRQAHRKY 834
Query: 368 WPTL 371
W +L
Sbjct: 835 WRSL 838
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 226/399 (56%), Gaps = 9/399 (2%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+YDE+M + + PE P RI A+ +K+ G+ +RCV + A+EA ++ +L +H
Sbjct: 81 TGLVYDEQMAHNYCLWDENFPECPGRIWAVRDKMAEYGLAERCVAVPAREASEEEILLIH 140
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V L+++ D R ++ + +S+YL+ S A LA GSV+++ +RV GE+
Sbjct: 141 SPQYVALMRSTQKMTMDELR-ALSDRYDSVYLHPTSFTCASLAVGSVLQLVDRVQHGEIR 199
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHHA D+ G+C++N +A+AA + + G ++LIVDWDVHHG TQ
Sbjct: 200 NGLAVVRPPGHHAHTDQMNGYCMFNQLAIAARY---AQLTYGAKRVLIVDWDVHHGQGTQ 256
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FSVHR++ G F+P + + +G+ G +N+NV W R DADY+
Sbjct: 257 FIFESDPSVLYFSVHRYDNGGFWPHLKESASSAVGKERGERFNVNVAWNKTRMSDADYIH 316
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
V+ ++LLPVA +F P +++++AGFD+ GDP G TP +S + LM AQG+++L+
Sbjct: 317 VFLNVLLPVAYEFQPHLVLVAAGFDSVVGDPKGEMSATPACFSHLTHLLMSLAQGRLILS 376
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYN S++ A + LL D + + P +S + + W L D
Sbjct: 377 LEGGYNQRSLAEGACASLKALLGDPCPRLTLPSAPCQSALDSMSDTISAHCSLWKMLQD- 435
Query: 375 LPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
S P S+ D E T LE L+ A+
Sbjct: 436 ----YESEGEPIIEPQSAKDGPPEGTDEPPLEKFLEQAM 470
>gi|338729036|ref|XP_001493915.3| PREDICTED: histone deacetylase 6-like [Equus caballus]
Length = 1187
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 222/366 (60%), Gaps = 13/366 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+RM H +HPE P R+ I +L+ + +RC+ L A+ A D L
Sbjct: 476 LQARTGLVYDQRMMGHYNLWDSHHPEMPQRVSRIMRRLEELHLAERCLTLPARPATDAEL 535
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R + +SIY+ + A LA G+V + E V
Sbjct: 536 LTCHSAEYVGRLR--ATEKMKTRELHREGANFDSIYICPSTFACAQLATGAVCRLVEAVL 593
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 594 AGEVLNGIAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 647
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ +F +DP VL+ S+HR++ GTF+P D+G + +G+ G G+ +NV W
Sbjct: 648 DVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPLGDEGASSQMGQAAGTGFTVNVTWNGP 707
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 708 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 767
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLS 365
A G I+L LEGGYNL SIS S+ AC LL D P + P I +
Sbjct: 768 LANGHIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLTRPPLAGALASITETIQVHR 827
Query: 366 AFWPTL 371
+W +L
Sbjct: 828 RYWRSL 833
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 215/364 (59%), Gaps = 6/364 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ +++L++ +++ + R RI A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLME--TTQYMNERELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEI 203
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ AI+RPPGHHA+ G+C++N+VAVAA + + I +ILIVDWDVHHG T
Sbjct: 204 RNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHE---IQRILIVDWDVHHGQGT 260
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F +DP VL+FS+HR+E G F+P ++ IG G G GY INVPW DADY+
Sbjct: 261 QFTFDQDPSVLYFSIHRYEQGRFWPHLKASDWSTIGFGQGRGYTINVPWNQVGMRDADYI 320
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L
Sbjct: 321 AAFLHILLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAHLTHLLMGLAGGKLIL 380
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
+LEGGYNL S++ V A ++ LL D S P S + + L FW L
Sbjct: 381 SLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCLSAKASLSCTLEALEPFWEVLVR 440
Query: 374 ELPT 377
+ T
Sbjct: 441 SVET 444
>gi|410988605|ref|XP_004000574.1| PREDICTED: histone deacetylase 6 [Felis catus]
Length = 1136
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 156/366 (42%), Positives = 224/366 (61%), Gaps = 13/366 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+RM H+ ++HPE P R+ I +L+ G+ RC+ L A+ A + L
Sbjct: 477 LQARTGLVYDQRMMGHHNLWDNHHPEMPQRVLRIMQRLEELGLAGRCLALPARPATEAEL 536
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R S +SIY+ + A LA G+V + E V
Sbjct: 537 LTCHSAEYVGRLR--ATEKMKTRELHREGSNFDSIYICPSTFACAQLATGAVCRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 595 AGEVLNGTAVVRPPGHHAERDAACGFCFFNSVAVAA------RHAQAISGQALRILIVDW 648
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ +F +DP VL+ S+HR++ GTF+P ++G + IG G G+ +NV W
Sbjct: 649 DVHHGNGTQHIFEEDPSVLYISLHRYDRGTFFPMGEEGASSQIGRAAGTGFTVNVAWNGP 708
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 RVGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAAWGDPLGGCQVSPEGYAHLTHLLMG 768
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLS 365
A G+I+L LEGGYNL SIS S+ AC LL D P + P I +
Sbjct: 769 LANGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQVHR 828
Query: 366 AFWPTL 371
+W +L
Sbjct: 829 RYWRSL 834
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 225/386 (58%), Gaps = 13/386 (3%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+ L+ VH
Sbjct: 86 TGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKDELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ +++L++ +++ + R RI A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLME--TTQYMNERELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGKEI 203
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG T
Sbjct: 204 RNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKH---DIQRVLIVDWDVHHGQGT 260
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F +DP VL+FS+HR+E G F+P ++ IG G G GY INVPW DADY+
Sbjct: 261 QFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGHGQGYTINVPWNQVGMRDADYI 320
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A+GK++L
Sbjct: 321 AAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAHLTHLLMGLAEGKLIL 380
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
+LEGGYNL S++ V A ++ LL D S P S + + L FW L
Sbjct: 381 SLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSALASLCCALEALEPFWEVL-- 438
Query: 374 ELPTKLTSLKAPPAHMISSSDSEDED 399
+ S++ P ++ +E++D
Sbjct: 439 -----VRSVETPEEDILEEDSAEEKD 459
>gi|260785050|ref|XP_002587576.1| hypothetical protein BRAFLDRAFT_95716 [Branchiostoma floridae]
gi|229272725|gb|EEN43587.1| hypothetical protein BRAFLDRAFT_95716 [Branchiostoma floridae]
Length = 1056
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 157/369 (42%), Positives = 225/369 (60%), Gaps = 17/369 (4%)
Query: 10 TIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
T R VGL++DE M H HPE P RI+ I L + RCV L ++ A ++
Sbjct: 464 TSGREVGLVHDEAMMNHVNIWMPGHPEQPYRIRRIMQALDRHRLQDRCVKLESRLATEEE 523
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
LL +HT H+ L++ +++ + +R + NSI+L + ++A LAAG + E VA
Sbjct: 524 LLYLHTAEHLQLMQE-TAEMTPRQLNRTQADFNSIFLCNDTYKSACLAAGCSMNAVEAVA 582
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
G + SA A+VRPPGHHAE D+ GFC++N+ A+AA F + LG+ ++LI+DWD+HH
Sbjct: 583 TGSVRSAVAVVRPPGHHAEVDKPCGFCIFNSAALAARF---AQKRLGVGRVLILDWDIHH 639
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ MF DP VL+ S+HR++ G F+P + D T++G GPG G+ +NVPW G GD
Sbjct: 640 GNGTQHMFVDDPTVLYISIHRYDNGMFFPGSPDADCTVVGSGPGEGFTVNVPWSRGGMGD 699
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
+Y+A + +++P+A ++ P+++IISAGFDAA GDPLG C VTP GY+ M L A G
Sbjct: 700 PEYMAAFQQVVMPIAYEYSPELVIISAGFDAARGDPLGHCDVTPPGYAHMTHMLSSLAGG 759
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSA--- 366
++VL LEGGYNL SIS S+ C +LL D P E + +AV+ LS
Sbjct: 760 RVVLLLEGGYNLSSISESMSECTKILLGDP-------CPPLEYSPPCEEAVQSMLSTLHV 812
Query: 367 ---FWPTLA 372
+W +LA
Sbjct: 813 HQKYWRSLA 821
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 177/293 (60%), Gaps = 7/293 (2%)
Query: 7 EGRTIKRRVGLLYDERMCKHNT---PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAK 63
E R + + G+++DERM ++ D E P R L+ G+ RCV + ++
Sbjct: 133 EERPVPKGTGVVFDERMADYHCLWEDLSDCKAERPARFTETLTLLRQRGLLDRCVTIPSR 192
Query: 64 EAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIE 123
A + +LS+H+E + +++ + D R +++ I ++ S E A L+AG ++
Sbjct: 193 PATREEVLSIHSEGLLGKLESSVTMTTDQLR-QLSETFEDIAIHPKSLECARLSAGCTLQ 251
Query: 124 VAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIV 183
+ ++V G + + A+VRPPGHHA+ D++ G+CL+NN+A+AA L + + ++LIV
Sbjct: 252 LMDQVLTGNVRNGMAVVRPPGHHADRDQSCGYCLFNNIAIAARQALTK---YSLERVLIV 308
Query: 184 DWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE 243
DWDVH GN TQ +F+ DPRVLFFS+HR+E ++P + Y+ +G G G GYN+NVPW
Sbjct: 309 DWDVHFGNGTQDLFYDDPRVLFFSIHRYEHMEYWPHMERANYSFVGRGAGKGYNVNVPWN 368
Query: 244 NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY 296
GD DY+A + +L+P+A +F P ++++SAGFD+A GD +G + P Y
Sbjct: 369 KIGLGDPDYMAAFQQVLMPMAYEFDPQLVLVSAGFDSAVGDRMGKMVLMPMAY 421
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 210 RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGP 269
R++ G F+P + D T++G GPG G+ +NVPW G GD +Y+A + +++P+A ++ P
Sbjct: 851 RYDNGMFFPGSPDADCTVVGSGPGEGFTVNVPWSRGGMGDPEYMAAFQQVVMPIAYEYSP 910
Query: 270 DIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVL 329
+++IISAGFDAA GDPLG C VTP GY+ M L A G++VL LEGGYNL SIS S+
Sbjct: 911 ELVIISAGFDAARGDPLGHCDVTPPGYAHMTHMLSSLAGGRVVLLLEGGYNLSSISESMA 970
Query: 330 ACMNVLLED 338
C +LL D
Sbjct: 971 ECTKILLGD 979
>gi|332021768|gb|EGI62119.1| Histone deacetylase 6 [Acromyrmex echinatior]
Length = 1204
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 221/358 (61%), Gaps = 4/358 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V ++YDE+M KH + HPE PNRI +I+ + G+ QRC +L + A + L +
Sbjct: 562 KVCIVYDEKMQKHCNISDNSHPEKPNRISSIYKNHEEHGLLQRCHLLQGRNATIEELSLI 621
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H +H++ IK S+ + + + AS NS+YL+ + +A ++AGS+++V + V GE
Sbjct: 622 HAIDHIDDIKRTSTLKLKELQKQ-ASDYNSVYLHFETWSSACISAGSLLQVVDAVLNGEC 680
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S AIVRPPGHHAE D A GFC++NNVAVAA + + +N++LIVDWDVHHGN T
Sbjct: 681 QSGVAIVRPPGHHAEKDIACGFCIFNNVAVAAMYAVQF---YHVNRVLIVDWDVHHGNGT 737
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +DP++L+ SVHR++ G F+P + YT G G G+N+N+PW GDA+Y+
Sbjct: 738 QSIFEEDPKILYISVHRYDNGNFFPNSKLANYTSTGLNAGEGFNVNIPWNKKGMGDAEYI 797
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + I++P+A F P++++ISAGFDA GD LGGC V+P Y + L+ A G+I+L
Sbjct: 798 AAFQQIVMPIAYQFNPELVLISAGFDACIGDTLGGCFVSPELYGHLTHWLLSLANGRIIL 857
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+LEGGYN+ SIS+++ C LL D P S I V K FWP L
Sbjct: 858 SLEGGYNINSISHAMTMCTKALLGDPLPMLDLNLIPCTSAINSINNVLKTHKKFWPNL 915
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 197/350 (56%), Gaps = 23/350 (6%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
+ I++ GL++D M +H +PE P R + + + G+ QRC ++ + A +
Sbjct: 109 KMIRKETGLVFDRSMAEHECIWDSNYPECPARFTRVLQRCEELGLVQRCKLIEPRRATEN 168
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
LLS H++ ++++K + ++SK + +Y++ + + LA GS I + E +
Sbjct: 169 ELLSKHSQKQIDILKATDDSMDSENLELLSSKYDCVYIHPSTYRLSLLAVGSTINLVESI 228
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
+GE+ + AI+RPPGHHA E G+C +NNVA+A LN N+ILIVDWDVH
Sbjct: 229 CKGEIQNGMAIIRPPGHHAMKSEYCGYCFFNNVALAVEKALNFSLA---NRILIVDWDVH 285
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HG +TQ+MF+ DPRV++FS+HR+E G F+P + + IGE G GYN NVP
Sbjct: 286 HGQATQQMFYNDPRVVYFSIHRYEHGEFWPNLRESDFHYIGEELGEGYNFNVPLNKTGMT 345
Query: 249 DADYLAVWDHILLPVAKDFGPDIII--------------------ISAGFDAAAGDPLGG 288
+ADY+A++ +LLP+A +F PD+II +SAGFD+A GD G
Sbjct: 346 NADYIAIFQQVLLPMAYEFQPDLIIVSAGYDAALGCPEFCPDLVLVSAGFDSALGDEKGE 405
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
+TP YS +L L+ A GK+ + LEGGY L S++ + LL D
Sbjct: 406 MLITPACYSHLLSSLLSLANGKVAVVLEGGYCLKSLAEGAALTLKTLLGD 455
>gi|190347501|gb|EDK39781.2| hypothetical protein PGUG_03879 [Meyerozyma guilliermondii ATCC
6260]
Length = 910
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 224/383 (58%), Gaps = 21/383 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL+YD RM H Y HPE+P RI I+ KL G+ +
Sbjct: 210 KTGLVYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKKLAETGLIHDTSLSGSDHLGP 269
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ +EA + +L VH++ H++ I++ D + K +SIY+N S +A
Sbjct: 270 YMTKIPVREATAEEILEVHSKEHLSYIQSTEKMSRDQLLEE-TEKGDSIYVNNDSYLSAK 328
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G IE + V EG + ++ AIVRPPGHHAEPD GFCL++NVAVAA +L PE
Sbjct: 329 LSCGGAIEACKAVVEGTVKNSMAIVRPPGHHAEPDTPGGFCLFSNVAVAAKNILKNYPE- 387
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +I+I+DWD+HHGN TQK F+ DPRVL+ S+HR+E G FYP G Y+ +GEGPG G
Sbjct: 388 SVRRIVIIDWDIHHGNGTQKAFYNDPRVLYISLHRYENGRFYPGTKYGHYSNVGEGPGEG 447
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
Y++N+PW GD DY+ ++ I+LPV +F PD++I+S+GFDAA GD +GGC VTP G
Sbjct: 448 YSVNIPWNCPGKGDGDYVYAFNKIILPVINEFNPDLLIVSSGFDAADGDIIGGCHVTPVG 507
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
Y M L A+G + + LEGGYNL SI+N LA VLL + P + A P T
Sbjct: 508 YGYMTHLLKGIARGNLAVILEGGYNLDSITNGALAVTKVLLGEPP-ENTISALPSSDTIE 566
Query: 356 VIQAVRKKLSAFWPTLADELPTK 378
+ V K L+ +W + +P +
Sbjct: 567 TVDEVMKALAQYWKCMRIGMPKQ 589
>gi|146417057|ref|XP_001484498.1| hypothetical protein PGUG_03879 [Meyerozyma guilliermondii ATCC
6260]
Length = 910
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 223/383 (58%), Gaps = 21/383 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL+YD RM H Y HPE+P RI I+ KL G+ +
Sbjct: 210 KTGLVYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKKLAETGLIHDTSLSGSDHLGP 269
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ +EA + +L VH++ H+ I++ D + K +SIY+N S +A
Sbjct: 270 YMTKIPVREATAEEILEVHSKEHLLYIQSTEKMSRDQLLEE-TEKGDSIYVNNDSYLSAK 328
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G IE + V EG + ++ AIVRPPGHHAEPD GFCL++NVAVAA +L PE
Sbjct: 329 LSCGGAIEACKAVVEGTVKNSMAIVRPPGHHAEPDTPGGFCLFSNVAVAAKNILKNYPE- 387
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +I+I+DWD+HHGN TQK F+ DPRVL+ S+HR+E G FYP G Y+ +GEGPG G
Sbjct: 388 SVRRIVIIDWDIHHGNGTQKAFYNDPRVLYISLHRYENGRFYPGTKYGHYSNVGEGPGEG 447
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
Y++N+PW GD DY+ ++ I+LPV +F PD++I+S+GFDAA GD +GGC VTP G
Sbjct: 448 YSVNIPWNCPGKGDGDYVYAFNKIILPVINEFNPDLLIVSSGFDAADGDIIGGCHVTPVG 507
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
Y M L A+G + + LEGGYNL SI+N LA VLL + P + A P T
Sbjct: 508 YGYMTHLLKGIARGNLAVILEGGYNLDSITNGALAVTKVLLGEPP-ENTISALPLSDTIE 566
Query: 356 VIQAVRKKLSAFWPTLADELPTK 378
+ V K L+ +W + +P +
Sbjct: 567 TVDEVMKALAQYWKCMRIGMPKQ 589
>gi|432110144|gb|ELK33921.1| Histone deacetylase 6 [Myotis davidii]
Length = 1150
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/369 (42%), Positives = 224/369 (60%), Gaps = 19/369 (5%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+ R GL+YD+RM H + HPE P R+ I ++L+ G+ RC++L A+ A D L
Sbjct: 481 FQSRTGLVYDQRMMDHYNMWDNQHPEVPQRVSRIMSRLEELGLAGRCLMLPARPATDAEL 540
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ +V ++ + K R ++ +SIY+ + +A LA G+ + E V
Sbjct: 541 LTCHSAEYVARLR-ATEKMRTRELYRESASFDSIYICPSTFASAQLATGATCCLVEAVLA 599
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDWD 186
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDWD
Sbjct: 600 GEVLNGVALVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGHPLRILIVDWD 653
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHGN TQ +F DP VL+ S+HR+++GTF+P D+G + +G G G+ +NV W R
Sbjct: 654 VHHGNGTQHIFEDDPSVLYISLHRYDYGTFFPMGDEGAPSQVGRAAGTGFTVNVAWNGPR 713
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
GD++YLA W ++LP+A +F P+++++SAGFDAA GDPLGGC ++P GY+ + LM
Sbjct: 714 MGDSEYLAAWHRLVLPIAYEFNPELVLVSAGFDAAWGDPLGGCHLSPEGYAHLTHLLMGL 773
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP----FESTWRVIQAVRK 362
A G+I+L LEGGYNL SIS S+ AC LL D P + P ES IQA R+
Sbjct: 774 ASGRIILILEGGYNLASISESMAACTRTLLGDPPPLLTLSRPPLLGALESITDTIQAHRR 833
Query: 363 KLSAFWPTL 371
+W +L
Sbjct: 834 ----YWRSL 838
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 197/324 (60%), Gaps = 4/324 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVFDEQLNDFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + + E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYNCACLASGSVLRLVDAILGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AIVRPPGHHA+ G+C++N+VAVAA + + GI ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKH---GIQRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ ILLPVA +F P +++++AGFDA GDP G TP G++ + LM A G+++L+
Sbjct: 322 AFLQILLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHMLMGLAGGRLLLS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLED 338
LEGGYNL S++ V A ++ LL D
Sbjct: 382 LEGGYNLRSLAEGVSASLHTLLGD 405
>gi|440800420|gb|ELR21459.1| hypothetical protein ACA1_184050 [Acanthamoeba castellanii str.
Neff]
Length = 410
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/427 (40%), Positives = 248/427 (58%), Gaps = 37/427 (8%)
Query: 1 MEVKSGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL 60
ME K G+ T G++YDE M KH D+HPE P R+ A W++L+ GI RC +
Sbjct: 1 MEAKVGDKAT-----GIVYDEYMIKHAPDPSDWHPEKPKRLWASWDRLRDKGIVDRCQRV 55
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
A+EA ++ L+ VHT+ HV+ + K D++ +A Y NE S AA LAAG
Sbjct: 56 VAREAGEEELMCVHTKEHVD---RVHEKAEDAKGGGMAYFDADTYANEYSERAARLAAGG 112
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
++E+ +VA GEL++ FA++RPPGHHAEP ++ GFCL+NNVAVA +L+ +P I KI
Sbjct: 113 LVELTTKVATGELDNGFALIRPPGHHAEPGQSQGFCLFNNVAVAVQTILDTQPH--IKKI 170
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
+IVDWDVHHGN T+K F++ +VLF S+HR E FYP + G +G G G GYNINV
Sbjct: 171 MIVDWDVHHGNGTEKTFYETDKVLFLSLHRFE-PDFYP--NSGPLESVGAGEGKGYNINV 227
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
PW G+A+YL ++ +++PVAK + PD++++S GFDAA GDPLGG +T GY M
Sbjct: 228 PWNFFGAGNAEYLYAFEQLVVPVAKAYQPDLVLVSCGFDAAWGDPLGGMTITASGYQQMT 287
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL---------EDKPVAGSSEAYPFE 351
+ L+ GK+VLALEGGYN+ I+ AC+ LL E + + Y
Sbjct: 288 RMLLAATNGKVVLALEGGYNVRIIATCAEACIRALLGEQEFNVEEEQRDLDKRKLQYDAA 347
Query: 352 STWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQV 411
+ ++ +K ++A AD P L++ A ++ D E ++
Sbjct: 348 AAQELMNKAKKVVNAVKEVHADHWPV----LRSTAAAQVADDD-----------EPTVEA 392
Query: 412 ALSKLKV 418
AL+KL +
Sbjct: 393 ALAKLSL 399
>gi|392573396|gb|EIW66536.1| hypothetical protein TREMEDRAFT_34982 [Tremella mesenterica DSM
1558]
Length = 732
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/375 (44%), Positives = 223/375 (59%), Gaps = 27/375 (7%)
Query: 14 RVGLLYDERMCKHNTPD-----------GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
R G +YD M H PD D HPE P RI I+ +L G+ +R LN
Sbjct: 60 RTGYIYDPLMMLH-APDEYIPTDAKVDSSDGHPEEPMRIMRIFARLNEQGLIRRMRKLNF 118
Query: 63 KEAKDKNLLSVHTENHVNLIKNISS--KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
+ + ++ VHTE+H N ++ + Q+ +L S+Y+ ++ A L+ G
Sbjct: 119 HQVTFEQVMLVHTEDHWNKVQGTETLTDQYIKDSKYYYDQL-SLYVCRQTAHCARLSCGG 177
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI-NK 179
VI+ V +GE+ +AFAIVRPPGHHAEPDE MGFC YNNVAVA E LG+ K
Sbjct: 178 VIQACISVCKGEVRNAFAIVRPPGHHAEPDEHMGFCFYNNVAVAT----KEVQRLGLAKK 233
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
+LI+DWDVHHGN TQ+ FW+DP VL+ S+HRH+ G FYP +D G M+G GPG G ++N
Sbjct: 234 VLILDWDVHHGNGTQRAFWEDPDVLYMSIHRHDGGKFYPTSDFGALDMVGSGPGEGKSVN 293
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+PW +G GD DY+ + I++P+A +F PD++IISAGFDAA GD LG C VTP Y M
Sbjct: 294 IPWPSGGFGDGDYIYAFQKIIMPIAYEFAPDLVIISAGFDAAKGDQLGACEVTPAAYGHM 353
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST---WRV 356
L A GK+V+ALEGGYNL +IS+S LA VLL P + P E++ V
Sbjct: 354 THMLCALAGGKVVVALEGGYNLTAISDSSLAVAQVLLGHTP----PDLEPLEASEVATEV 409
Query: 357 IQAVRKKLSAFWPTL 371
+ V K S +W ++
Sbjct: 410 MHQVAKVQSKYWKSI 424
>gi|299751193|ref|XP_002911602.1| histone deacetylase clr3 [Coprinopsis cinerea okayama7#130]
gi|298409263|gb|EFI28108.1| histone deacetylase clr3 [Coprinopsis cinerea okayama7#130]
Length = 692
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/363 (44%), Positives = 223/363 (61%), Gaps = 17/363 (4%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VG +Y M +H +G HPE P RIK IW+ L A G+ ++ ++ ++ K + + VH
Sbjct: 62 VGYVYSADMMQHFNEEG--HPEQPARIKRIWDLLVAKGLTEKMRRIDIRKVKKEEAMLVH 119
Query: 75 TENHVNLIKNISSKQFDSRRDRIAS-KLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+E+H + + + R D + S+Y+ +G++ AA L+ G VIE + VA G +
Sbjct: 120 SEDHWDKVIQLQYMDDQQRLDSAEYYERMSLYVMKGTTPAALLSCGGVIEASLAVARGLV 179
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+FAIVRPPGHHAEPDE MGFC +NNVAVAA + P + KILI+DWDVHHGN T
Sbjct: 180 QKSFAIVRPPGHHAEPDEHMGFCFFNNVAVAARVVQQLTP---LKKILILDWDVHHGNGT 236
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q+ F DP VL+ S+HR+E G FYP G G+GPG G+++NVPW DADYL
Sbjct: 237 QRAFDDDPSVLYMSIHRYESGHFYPCGPFGSLESCGKGPGEGFSVNVPWPRAGMEDADYL 296
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F PD++IISAGFDAA GD LG C VTP GY+ M L A GK+V+
Sbjct: 297 YAFQKVIMPIAMEFAPDLVIISAGFDAADGDDLGECHVTPKGYAHMTHMLAGLAGGKMVV 356
Query: 314 ALEGGYNLGSISNSVLACMNVLL-----EDKPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
ALEGGYNL +IS+S LA +LL + P+ S +A E+ W V K LS +W
Sbjct: 357 ALEGGYNLDAISDSALAVTEILLGQAPPQIDPMIASEDAT--ETVW----LVAKHLSRYW 410
Query: 369 PTL 371
+L
Sbjct: 411 KSL 413
>gi|307183184|gb|EFN70093.1| Histone deacetylase 6 [Camponotus floridanus]
Length = 1165
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 224/358 (62%), Gaps = 4/358 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V ++YDE+M KH + HPE P+RI +I+N + G+ +RC +L + A L
Sbjct: 524 KVCIVYDEKMQKHCNISDNIHPEKPSRISSIYNNHENYGLLERCHLLQGRSATLAELSLA 583
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H++++++ IK S+ + + AS NS+YL+ + +A ++AG ++++ + V GE
Sbjct: 584 HSKDYIDSIKRTSTLK-PKELQKQASDYNSVYLHNETWSSACVSAGCLLKMVDAVLNGES 642
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S AIVRPPGHHAE D A GFC++NNVA+AA + + + ++LIVDWDVHHGN T
Sbjct: 643 QSGIAIVRPPGHHAEEDNACGFCIFNNVAIAAQYAVQFH---HLKRVLIVDWDVHHGNGT 699
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +DP++L+ SVHR++ G+F+P + YT +G G G+N+N+PW GDA+Y+
Sbjct: 700 QSIFEEDPKILYISVHRYDNGSFFPNSKRANYTSVGLNAGEGFNVNIPWNKKGMGDAEYI 759
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
AV+ +++P+A F P++I++SAGFDA GDPLGGC V+P Y ++ L A G+I+L
Sbjct: 760 AVFQQVVMPIAYQFNPELILVSAGFDACVGDPLGGCLVSPELYGHLIHWLSSLANGRIIL 819
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+LEGGYN+ SIS+++ C LL D S P S I V K FWP L
Sbjct: 820 SLEGGYNINSISHAMTMCTKALLGDPLPMLDSGLIPCSSAVNSINNVLKTHKKFWPNL 877
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 171/277 (61%), Gaps = 3/277 (1%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
+ +++ GL++D M +H +PE P R + + + + QRC + ++ A +
Sbjct: 106 KIVRKETGLVFDRSMAEHECLWDPNYPECPARFTRVLQRCEELNLVQRCKRVESRLATEN 165
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
+L+ H++ ++++K + ++SK ++++++ + + + LA GS I + E +
Sbjct: 166 EILTKHSQKQIDILKATDGCADSENLELLSSKYDAVFVHPSTYKLSLLAVGSTINLVESI 225
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
+GE+ + AI+RPPGHHA E G+C +NNVA+A L+ N+ILIVDWDVH
Sbjct: 226 CKGEIQNGMAIIRPPGHHAMKSEYCGYCFFNNVAIAVEKALSSNLA---NRILIVDWDVH 282
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HG +TQ+MF+ DPRV++FS+HR+E+G F+P + + IGE G GYN N+P
Sbjct: 283 HGQATQQMFYNDPRVVYFSIHRYEYGEFWPNLKESDFHYIGEDLGEGYNFNIPLNKTGMT 342
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP 285
+ADY+A++ +LLP+A +F PD+II+SAG+DAA G P
Sbjct: 343 NADYIAIFQQVLLPMAYEFQPDLIIVSAGYDAALGCP 379
>gi|301630492|ref|XP_002944351.1| PREDICTED: histone deacetylase 6 [Xenopus (Silurana) tropicalis]
Length = 1165
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 225/363 (61%), Gaps = 8/363 (2%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+R L+YDE+M +H+ HPE+P RI I+ + + G+ RC + ++ A K L
Sbjct: 480 QRTALVYDEQMMEHHNMWDSCHPESPQRINQIFKRHKDLGLLDRCSRIPSRLATQKELQM 539
Query: 73 VHTENHVNLIKNISSKQFDSRRD--RIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
H+ ++ I+ I + RD R+ ++ NSIY+N S +A LAAGS V E V
Sbjct: 540 CHS---LSYIQKIEASAHMKPRDLHRLGNEYNSIYINSRSYHSARLAAGSTFSVVEAVVT 596
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL--LNERPELGINKILIVDWDVH 188
G+ + IVRPPGHHAEP EA GFC +N VA+AA + L R E + +++I+DWDVH
Sbjct: 597 GKAQNGVCIVRPPGHHAEPAEACGFCFFNTVALAARYAQRLRSRSEDPL-RVMILDWDVH 655
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ +F +D VL+ S+HR++ G F+P ++D + +G G G G+N+N+PW + G
Sbjct: 656 HGNGTQHIFQEDASVLYVSLHRYDEGLFFPNSEDASHDKVGIGKGAGFNVNIPWNGSKMG 715
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
D +YL + +++P+A +F P +++ISAGFDAA GDPLGGC+V+P GY+ M LM A
Sbjct: 716 DPEYLMAFHRVVMPIAYEFNPQLVLISAGFDAARGDPLGGCQVSPEGYAHMTHLLMGLAG 775
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
G+++L LEGGYNL SIS S++ C + LL D P S P S + ++ VR+ +W
Sbjct: 776 GRVILVLEGGYNLTSISESMVMCTHSLLGDPPPTLSDLRPPKPSAFNSVRKVRQAHRKYW 835
Query: 369 PTL 371
+L
Sbjct: 836 RSL 838
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/362 (37%), Positives = 212/362 (58%), Gaps = 10/362 (2%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+YDE+M + + PE P RI A+ +K+ G+ +RCV + A+EA ++ + +H
Sbjct: 81 TGLVYDEQMAQTCCLWDENFPECPARIWAVRDKMAEYGLAERCVAVQAREASEEEISLIH 140
Query: 75 TENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
+ +V L+ +N++ ++ + DR +S+YL+ S A LA GSV+++ ++V
Sbjct: 141 SPQYVALMGSTQNMNVEELQALSDR----YDSVYLHPTSFTCASLAVGSVLQLVDKVLRR 196
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
E+ + A+VRPPGHHA D+ G+C++N +A+AA + G ++LIVDWDVHHG
Sbjct: 197 EIRNGLAVVRPPGHHAHVDQMNGYCMFNQLAIAARYAQRT---YGAKRVLIVDWDVHHGQ 253
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ +F DP VL+FSVHR+E G F+P + + +G+ G +N+NV W R DAD
Sbjct: 254 GTQFLFENDPSVLYFSVHRYENGGFWPHLRESASSAVGKERGERFNVNVAWNKTRMSDAD 313
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
Y+ V+ +ILLP+A +F P +++++AGFD+ GDP G TP +S + LM AQG++
Sbjct: 314 YIHVFLNILLPIAYEFQPHLVLVAAGFDSVVGDPKGEMSATPGCFSHLTHLLMSLAQGRL 373
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+L+LEGGYN S++ V AC+ LL D + P +S I W L
Sbjct: 374 ILSLEGGYNQRSLAEGVCACLKALLGDPCPKLPLPSAPCQSALDSISDTLSAHCRLWKVL 433
Query: 372 AD 373
D
Sbjct: 434 QD 435
>gi|322785610|gb|EFZ12265.1| hypothetical protein SINV_07643 [Solenopsis invicta]
Length = 1170
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 159/415 (38%), Positives = 243/415 (58%), Gaps = 8/415 (1%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
R RV ++YDE+M KH + HPE P+RI +I+ + G+ QRC +L + A +
Sbjct: 526 RKAPHRVCIVYDEKMQKHCNVSDNSHPEKPSRISSIYKNHEEHGVLQRCHLLQGRSATIE 585
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
L VH++++++ IK S+ + D+ AS NS+YL+ + +A ++ GS+++V + V
Sbjct: 586 ELALVHSKDYIDDIKQTSTLKL-KELDKQASDYNSVYLHTETWSSACMSTGSLLQVVDAV 644
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
GE S AIVRPPGHHAE D A GFC++NNVAVAA + + + ++LI+DWDVH
Sbjct: 645 LNGECQSGVAIVRPPGHHAEKDNACGFCIFNNVAVAAMYAVQFHL---VKRVLIIDWDVH 701
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ +F +DPR+L+ SVHR++ G+F+P + YT +G G G+N+N+PW G
Sbjct: 702 HGNGTQSIFEEDPRILYVSVHRYDNGSFFPNSKIANYTNVGLNAGEGFNVNIPWNKKGMG 761
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DA+Y+A + +++P+A F P+++++SAGFDA GD LGGC V+P Y + L A
Sbjct: 762 DAEYIAAFQQVVMPIAYQFNPELVLVSAGFDACIGDTLGGCLVSPELYGHLTHWLSSLAN 821
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
G+I+L+LEGGYN+ SIS+++ C LL D P S I V + FW
Sbjct: 822 GRIILSLEGGYNINSISHAMTMCTKTLLGDPLPMLDPSLIPCTSAINSINNVLRTHKKFW 881
Query: 369 PTL--ADELPTK--LTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSKLKVD 419
L LP + L LK P + D+ ++E A+ + KL+++
Sbjct: 882 SNLQYGMSLPKEKVLPKLKTVPNKHEEQGRNADKPKQMEPKIALEGIESEKLELN 936
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/331 (38%), Positives = 200/331 (60%), Gaps = 5/331 (1%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
+T+++ GL++D M +H +PE P R + + + G+ QRC ++ + A +
Sbjct: 98 KTMRKETGLVFDRSMAEHECIWDPNYPECPARFTRVLRRCEELGLVQRCRLIEPRLAAES 157
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
LLS H++ ++++K + ++SK + +Y++ + + LA GS + E V
Sbjct: 158 ELLSKHSQKQIDILKATDGSTDFENLELLSSKYDCVYIHPSTYRLSLLAVGSTTNLVESV 217
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI-NKILIVDWDV 187
+GE+ + AI+RPPGHHA E G+C +NNVA+AA L+ G+ N+ILIVDWDV
Sbjct: 218 CKGEIQNGMAIIRPPGHHAMKSEYCGYCFFNNVALAAEKALSS----GLANRILIVDWDV 273
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG +TQ+MF+ DPRV++FS+HR+E G F+P + + +GE G GYN N+P
Sbjct: 274 HHGQATQQMFYNDPRVVYFSIHRYEHGEFWPNLRESDFHYVGEDLGEGYNFNIPLNKTGM 333
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
+ADY+A++ +LLP+A +F PD+II+SAG+DAA G P G +TP YS +L L+ A
Sbjct: 334 TNADYIAIFQQVLLPMAYEFQPDLIIVSAGYDAALGCPEGEMLITPACYSHLLSSLLSLA 393
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLED 338
GK+ + LEGGY L S++ + LL D
Sbjct: 394 NGKVAVILEGGYCLKSLAEGAALTLRTLLGD 424
>gi|326669858|ref|XP_693858.4| PREDICTED: histone deacetylase 6 [Danio rerio]
Length = 1081
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 237/375 (63%), Gaps = 10/375 (2%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+YD+RM H+ +HPE P RI I+++ + + RC + A+ A ++ L H
Sbjct: 444 TGLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEELRLLSRCHRIPARLATEEELALCH 503
Query: 75 TENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ H+++IK SS+ R +R+ + NSI+++ S A LAAGS A+ + G++
Sbjct: 504 SSKHISIIK--SSEHMKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSAQAILTGQV 561
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLN-ERPELGINKILIVDWDVHHGNS 192
+A AIVRPPGHHAE D A GFC +N A+ A + + R L ++LIVDWDVHHGN
Sbjct: 562 RNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESL---RVLIVDWDVHHGNG 618
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F +D VL+ S+HR+E G F+P ++D Y +G G G GYN+N+PW G+ GD +Y
Sbjct: 619 TQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEY 678
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+++P+A++F P+++++SAGFDAA GDPLGG +VTP GY+ + +LM A G+++
Sbjct: 679 MAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVL 738
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV-IQAVRKKLSAFWPTL 371
+ LEGGYNL SIS S+ C ++LL D P + P +++ V I V + + FW +L
Sbjct: 739 IILEGGYNLTSISESMSMCTSMLLGDSPPS-LDHLTPLKTSATVSINNVLRAHAPFWSSL 797
Query: 372 ADELPTKLT-SLKAP 385
+P L SL +P
Sbjct: 798 RVNIPESLRLSLPSP 812
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/365 (38%), Positives = 214/365 (58%), Gaps = 4/365 (1%)
Query: 7 EGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
+G++ GL+Y + + + HPE P R+ + L+ G+ RCV + A+
Sbjct: 55 QGKSKATGTGLVYVDAFTRFHCLWDASHPECPARVSTVMEMLETEGLLGRCVQVEARAVT 114
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAE 126
+ LL VHT+ +V L+K+ + + +A K +S+YL+ G +A L+ GSV+++ +
Sbjct: 115 EDELLLVHTKEYVELMKS-TQNMTEEELKTLAEKYDSVYLHPGFFSSACLSVGSVLQLVD 173
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
+V +L + F+I RPPGHHA+ D+ GFC++NN+A+AA + + ++LIVDWD
Sbjct: 174 KVMTSQLRNGFSINRPPGHHAQADKMNGFCMFNNLAIAARYAQKRH---RVQRVLIVDWD 230
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHG Q +F +DP VL+FSVHR+E G+F+P + + +G G G GYNIN+PW
Sbjct: 231 VHHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKVG 290
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
DY+ + +LLPVA +F P +++++AGFDA GDP GG +V+P +S++ L
Sbjct: 291 MESGDYITAFQQLLLPVAYEFQPQLVLVAAGFDAVIGDPKGGMQVSPECFSILTHMLKGV 350
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSA 366
AQG++VLALEGGYNL S + V A M LL D S P ES + I L
Sbjct: 351 AQGRLVLALEGGYNLQSTAEGVCASMRSLLGDPCPHLPSSGAPCESALKSISKTISDLYP 410
Query: 367 FWPTL 371
FW +L
Sbjct: 411 FWKSL 415
>gi|157278867|gb|AAI15263.1| Hdac6 protein [Danio rerio]
Length = 929
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 237/375 (63%), Gaps = 10/375 (2%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+YD+RM H+ +HPE P RI I+++ + + RC + A+ A ++ L H
Sbjct: 292 TGLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEELRLLSRCHRIPARLATEEELALCH 351
Query: 75 TENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ H+++IK SS+ R +R+ + NSI+++ S A LAAGS A+ + G++
Sbjct: 352 SSKHISIIK--SSEHMKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSAQAILTGQV 409
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLN-ERPELGINKILIVDWDVHHGNS 192
+A AIVRPPGHHAE D A GFC +N A+ A + + R L ++LIVDWDVHHGN
Sbjct: 410 RNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESL---RVLIVDWDVHHGNG 466
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F +D VL+ S+HR+E G F+P ++D Y +G G G GYN+N+PW G+ GD +Y
Sbjct: 467 TQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEY 526
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+++P+A++F P+++++SAGFDAA GDPLGG +VTP GY+ + +LM A G+++
Sbjct: 527 MAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVL 586
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV-IQAVRKKLSAFWPTL 371
+ LEGGYNL SIS S+ C ++LL D P + P +++ V I V + + FW +L
Sbjct: 587 IILEGGYNLTSISESMSMCTSMLLGDSPPS-LDHLTPLKTSATVSINNVLRAHAPFWSSL 645
Query: 372 ADELPTKLT-SLKAP 385
+P L SL +P
Sbjct: 646 RVNIPESLRLSLPSP 660
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/266 (42%), Positives = 164/266 (61%), Gaps = 3/266 (1%)
Query: 106 LNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA 165
L+ G +A L+ GSV+++ ++V +L + F+I RPPGHHA+ D+ GFC++NN+A+AA
Sbjct: 1 LHPGFFSSACLSVGSVLQLVDKVMTSQLRNGFSINRPPGHHAQADKMNGFCMFNNLAIAA 60
Query: 166 SFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFY 225
+ + ++LIVDWDVHHG Q +F +DP VL+FSVHR+E G+F+P +
Sbjct: 61 RYAQKRH---RVQRVLIVDWDVHHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDS 117
Query: 226 TMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP 285
+ +G G G GYNIN+PW DY+ + +LLPVA +F P +++++AGFDA GDP
Sbjct: 118 SSVGSGAGQGYNINLPWNKVGMESGDYITAFQQLLLPVAYEFQPQLVLVAAGFDAVIGDP 177
Query: 286 LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSS 345
GG +V+P +S++ L AQG++VLALEGGYNL S + V A M LL D S
Sbjct: 178 KGGMQVSPECFSILTHMLKGVAQGRLVLALEGGYNLQSTAEGVCASMRSLLGDPCPHLPS 237
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
P ES + I L FW +L
Sbjct: 238 SGAPCESALKSISKTISDLYPFWKSL 263
>gi|390354372|ref|XP_797761.3| PREDICTED: histone deacetylase 4-like [Strongylocentrotus purpuratus]
Length = 1083
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 240/395 (60%), Gaps = 31/395 (7%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL YD M KH G+ HPE+P R+++IW +L GI RC + ++A + L S
Sbjct: 648 TGLAYDTLMLKHQCQCGNNQNHPEHPGRLQSIWARLHERGIVSRCERIRTRKASLEELQS 707
Query: 73 VHTENHVNLI--KNISSKQFDSRRDRIASKLNSIYLNEG--------------SSEAAYL 116
H+E + + DSR+ + KLN +L+ G S A +
Sbjct: 708 CHSEGYTLFFGTSQTHKAKLDSRKLALIPKLNFTWLSCGGLGVDTDTVWHDIQSPGAVRI 767
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
AAG+VIE+A +VA GEL + FAIVRPPGHHAE +AMGFC +N++A+AA L R +L
Sbjct: 768 AAGAVIELAFKVATGELKNGFAIVRPPGHHAETSQAMGFCFFNSIAIAAKQL---RLKLK 824
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
+NKILI+DWDVHHGNSTQK+F++DP VL+ S+HRH+ G F+P G G G GLGY
Sbjct: 825 LNKILIIDWDVHHGNSTQKIFYEDPHVLYISLHRHDNGNFFPGT--GAPDESGCGAGLGY 882
Query: 237 NINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRV 291
N+N+ + G GDA+Y+A + I+LP+A++F PD++++S+GFDAA G +PLGG +V
Sbjct: 883 NVNIAFHGGLNPPMGDAEYIAAFRSIVLPIAREFSPDVVLVSSGFDAANGHPNPLGGYKV 942
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFE 351
TP +S M +K+M A G++VLALEGGY+L +I ++ C LL D P S +A
Sbjct: 943 TPACFSYMTRKVMGLANGRVVLALEGGYDLTAICDASEVCAQTLLGDDPSPLSEDAINGV 1002
Query: 352 STWRVIQAVRKKL---SAFWPTLADELPTKLTSLK 383
++ +R+ + S +W ++ D+ T S++
Sbjct: 1003 PNANAVECLRRTIEIQSEYWTSVRDQSATVAMSMR 1037
>gi|448091857|ref|XP_004197432.1| Piso0_004685 [Millerozyma farinosa CBS 7064]
gi|448096439|ref|XP_004198463.1| Piso0_004685 [Millerozyma farinosa CBS 7064]
gi|359378854|emb|CCE85113.1| Piso0_004685 [Millerozyma farinosa CBS 7064]
gi|359379885|emb|CCE84082.1| Piso0_004685 [Millerozyma farinosa CBS 7064]
Length = 801
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/386 (43%), Positives = 223/386 (57%), Gaps = 27/386 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL+YD RM H Y HPE+P RI I+ KL G+ Q +
Sbjct: 87 KTGLVYDVRMRYHAKIFTSYSEYIDPHPEDPRRIYRIYKKLAEGGLVQDSSLAGKDEIGE 146
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI---ASKLNSIYLNEGSSE 112
+ +EA + +L VH+E+H+ I S R+R+ K +SIY+N S
Sbjct: 147 LMQKIPTREATAEEILEVHSEDHLKFISETESMS----RERLLEETEKGDSIYVNNDSFF 202
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + +A A+VRPPGHHAEPD GFCL++NVAVAA +L
Sbjct: 203 SAKLSCGGAIEACKAVIEGRVKNALAVVRPPGHHAEPDSPGGFCLFSNVAVAAKNILKNY 262
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + +I+IVDWD+HHGN TQK F+ DPRVL+ S+HR+E G FYP G +T GEG
Sbjct: 263 PE-SVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRYENGKFYPGTKYGAHTQTGEGK 321
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G GY++N+PW GD DY ++ +++P+ +F PD+II+S+GFDAA GD +G C VT
Sbjct: 322 GEGYSVNIPWSIPGMGDGDYFYAFNKVVIPIITEFDPDLIIVSSGFDAADGDIIGECHVT 381
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL SIS S LA VL+ + P G+ A P
Sbjct: 382 PTGYGYMTHSLKGIAKGKMCVVLEGGYNLDSISKSALAVAKVLVGEPP-DGTIRAKPRFE 440
Query: 353 TWRVIQAVRKKLSAFWPTLADELPTK 378
T VI V K S +W + P K
Sbjct: 441 TIEVISDVIKTQSKYWDCMKPGNPNK 466
>gi|334350414|ref|XP_001371963.2| PREDICTED: histone deacetylase 6-like [Monodelphis domestica]
Length = 1117
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 215/359 (59%), Gaps = 5/359 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R GL+YDE+M +H +HPE P RI I G+ RC VL A+ A ++ LL+
Sbjct: 529 RTGLVYDEKMMEHFNMWDSHHPERPERIAQIAQHHMELGLTPRCFVLPARSATNQELLAC 588
Query: 74 HTENHVNLIKNISS-KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
H+E ++ I+ S K D R+ + NSIY++ S A LAAG+ + E + E
Sbjct: 589 HSEEYIERIRATSGLKPRDLHRE--GTSYNSIYISPHSFCCAQLAAGAACRLVEAILARE 646
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + AIVRPPGHHAE D A GFC +N+VAVAA E + +ILIVDWD+HHGN
Sbjct: 647 VQNGLAIVRPPGHHAERDAACGFCFFNSVAVAARHA-QEVAGRAL-RILIVDWDIHHGNG 704
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F +DP VL+ S+HR++ G F+P +DG + +G G G G+N+NV W R GD DY
Sbjct: 705 TQHIFEEDPSVLYVSLHRYDHGAFFPMAEDGASSHVGRGQGEGFNVNVAWNGPRLGDPDY 764
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
L HI++P+A +F P+++++SAGFDAA GDPLGGC V+P GY+ M LM A G+I
Sbjct: 765 LTAMHHIVMPIAYEFNPELVLVSAGFDAARGDPLGGCLVSPEGYAHMTHLLMGLAGGRIA 824
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
L LEGGYNL SIS S+ AC LL D P P T+ + V +W +L
Sbjct: 825 LVLEGGYNLTSISESMAACTRTLLGDPPPLMPWLRPPLPGTFLSLAEVAHIHQKYWQSL 883
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 213/361 (59%), Gaps = 4/361 (1%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKD 67
G + GL+ DERM + P + PE P R++A+ +L + +RC+++ A+ A
Sbjct: 128 GAAVPSGTGLVLDERMSSFHCPWDESFPERPERLQAVQEQLARDCLLERCLLIEAQPATP 187
Query: 68 KNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAER 127
+ L VH++ +V+L+ + + + +S R ++ +S+YL+ S A LA G+++ + +
Sbjct: 188 EELQLVHSQEYVDLMAS-TPQMTESERRALSDTYDSVYLHPNSFPCALLATGALLRLVDA 246
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ GE+ + A+VRPPGHHA+ + G+C++NN+A+AA + ER + +ILIVDWDV
Sbjct: 247 LMTGEIRNGLAVVRPPGHHAQRESMNGYCMFNNIAIAARYA-QERHH--VARILIVDWDV 303
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG TQ +F +DP VL FSVHR+E G F+P + + G G G GY +NVPW
Sbjct: 304 HHGQGTQFIFEQDPSVLCFSVHRYELGRFWPHLEASDWRATGHGKGQGYTVNVPWNQVGM 363
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D DY+ + H+LLP+A +F P +++++AGFDA GDP G TP G++ + LM A
Sbjct: 364 RDGDYITAFLHVLLPIALEFQPQMVLVAAGFDAMLGDPKGEMAATPGGFAHLTHLLMGLA 423
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAF 367
+G+++L+LEGGYNL S++ V A + LL D ++ P S + + F
Sbjct: 424 KGRLILSLEGGYNLHSLALGVSATLQTLLGDPCPMLATPCAPCPSALASLSSTLAAHRPF 483
Query: 368 W 368
W
Sbjct: 484 W 484
>gi|345807128|ref|XP_855362.2| PREDICTED: histone deacetylase 6 [Canis lupus familiaris]
Length = 1143
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 220/366 (60%), Gaps = 13/366 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD M H ++HPE P R+ I +L+ G+ RC+ L + A D L
Sbjct: 476 LQARTGLVYDPAMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAEL 535
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R S +SIY+ + A LA GSV + E V
Sbjct: 536 LTCHSAEYVGRLR--ATEKMKTRELHREGSNFDSIYICPSTFACAQLATGSVCRLVEAVL 593
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
E+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 594 AREVLNGTAVVRPPGHHAERDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 647
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ +F +DP VL+ S+HR++ GTF+P D+G + +G+ G G+ +NV W
Sbjct: 648 DVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGP 707
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 708 RVGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 767
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLS 365
A G++VL LEGGYNL SIS S+ AC LL D P + P I +
Sbjct: 768 LANGRVVLILEGGYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQVHR 827
Query: 366 AFWPTL 371
+W +L
Sbjct: 828 RYWRSL 833
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 212/358 (59%), Gaps = 6/358 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQDGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ +++L++ +++ + RI A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLME--TTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLRNEI 203
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ AIVRPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG T
Sbjct: 204 RNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKH---NIERVLIVDWDVHHGQGT 260
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F +DP VL+FS+HR+E G F+P ++ IG G G GY INVPW DADY+
Sbjct: 261 QFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQVGMRDADYI 320
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + +LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L
Sbjct: 321 AAFLRLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMGLAGGKLIL 380
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+LEGGYNL +++ V A ++ LL D S + P S + + L FW L
Sbjct: 381 SLEGGYNLRALAEGVSASLHTLLGDPCPILESPSAPCPSAQASLFCALEALEPFWEVL 438
>gi|168039175|ref|XP_001772074.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162676675|gb|EDQ63155.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 534
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/365 (45%), Positives = 219/365 (60%), Gaps = 15/365 (4%)
Query: 19 YDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHTEN 77
+DERM H G HPE PNR++AI LQA+G+ +RC + ++EA + L VHT N
Sbjct: 127 FDERMLLHEE-TGKSHPERPNRLRAIMEGLQASGLLSERCFTIPSREATEAELEVVHTAN 185
Query: 78 HVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAF 137
H IS+ Q RR ++ + Y NE S+ AA LAAG ++A + G + F
Sbjct: 186 H------ISAVQATERRG-LSYFTSDTYANEHSALAARLAAGICADLASAIMTGTACNGF 238
Query: 138 AIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMF 197
A+VRPPGHHAE D+ MGFCL+NNV VAA + K+L+VDWDVHHGN TQK+F
Sbjct: 239 AVVRPPGHHAEQDQVMGFCLHNNVCVAARAAQASGAK----KVLVVDWDVHHGNGTQKIF 294
Query: 198 WKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWD 257
+DP +L+ S+HRHE G FYP G+ +G GPG G+++N+PW G GD DYL+ +
Sbjct: 295 EQDPTILYISLHRHEAGAFYPGT--GWAHHVGSGPGEGFSVNIPWSCGGIGDEDYLSAFQ 352
Query: 258 HILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEG 317
HI++P+A+ F PDI I+SAGFDAA+GDPLGGC VTP GY+ M L A G+I++ LEG
Sbjct: 353 HIVMPIARQFEPDITIVSAGFDAASGDPLGGCDVTPEGYAQMTSLLSFLAAGRILVVLEG 412
Query: 318 GYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPT 377
GYNL SIS S A M VL P P + + V +W L D
Sbjct: 413 GYNLRSISASAAAVMKVLRGSNPGPLPDNLQPTPAGVGAMLDVFTIQRRYWSNLHDATFL 472
Query: 378 KLTSL 382
KL +L
Sbjct: 473 KLETL 477
>gi|148701990|gb|EDL33937.1| histone deacetylase 6 [Mus musculus]
Length = 1102
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/367 (43%), Positives = 222/367 (60%), Gaps = 20/367 (5%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDE+M H ++HPE P RI I L+ G+ RC++L A+ A D L
Sbjct: 434 LQNRTGLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSEL 493
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ +V ++ + K R + +SIY+ + A LA G+ + E V
Sbjct: 494 LTCHSAEYVEHLRT-TEKMKTRDLHREGANFDSIYICPSTFACAKLATGAACRLVEAVLS 552
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASF--LLNERPELGINKILIVDWDVH 188
GE+ + A+VRPPGHHAEP+ A GFC +N+VAVAA ++ R +ILIVDWDVH
Sbjct: 553 GEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGR----ALRILIVDWDVH 608
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ +F DP VL+ S+HR++ GTF+P D+G + +G G+G+ +NVPW R G
Sbjct: 609 HGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMG 668
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DADYLA W ++LP+A + ++IS+GFDAA GDPLGGC+VTP GY+ + LM A
Sbjct: 669 DADYLAAWHRLVLPIAYE-----VLISSGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAG 723
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKP----VAGSSEAYPFESTWRVIQAVRKKL 364
G+I+L LEGGYNL SIS S+ AC + LL D P + ++ S VIQ RK
Sbjct: 724 GRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQSGALVSISEVIQVHRK-- 781
Query: 365 SAFWPTL 371
+W +L
Sbjct: 782 --YWRSL 786
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/337 (39%), Positives = 199/337 (59%), Gaps = 4/337 (1%)
Query: 35 PENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRR 94
PE+P R+ AI +L G+ RCV A+ A+ + L+ VH+ +++L++ R
Sbjct: 63 PESPERLHAIREQLILEGLLGRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELR 122
Query: 95 DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMG 154
+A +S+YL+ S A LA GSV+ + + + E+ + A++RPPGHHA+ + G
Sbjct: 123 -VLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEIRNGMAVIRPPGHHAQHNLMDG 181
Query: 155 FCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFG 214
+C++N++AVAA + + I ++LIVDWDVHHG TQ +F +DP VL+FS+HR+E G
Sbjct: 182 YCMFNHLAVAARYAQKKH---RIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHG 238
Query: 215 TFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIII 274
F+P ++ IG G G GY INVPW DADY+A + HILLPVA +F P ++++
Sbjct: 239 RFWPHLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAAFLHILLPVASEFQPQLVLV 298
Query: 275 SAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNV 334
+AGFDA GDP G TP G++ + LM A GK++L+LEGGYNL +++ V A ++
Sbjct: 299 AAGFDALHGDPKGEMAATPAGFAHLTHLLMGLAGGKLILSLEGGYNLRALAKGVSASLHT 358
Query: 335 LLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LL D S P S I + L FW L
Sbjct: 359 LLGDPCPMLESCVVPCASAQTSIYCTLEALEPFWEVL 395
>gi|426257065|ref|XP_004022155.1| PREDICTED: histone deacetylase 6 [Ovis aries]
Length = 1129
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 226/372 (60%), Gaps = 25/372 (6%)
Query: 10 TIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
++ R GL+YD+RM +H +YHPE P RI I + L G+ +RC L A+ A D
Sbjct: 477 VLQARTGLVYDQRMMEHYNLWDNYHPEMPQRIHCIMHHLDELGLAKRCHSLPARPATDAE 536
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
LL+ H+ H+ ++ + R R + +SIY+ + A LAAG+ + E V
Sbjct: 537 LLTCHSAEHLERLRATEKMKTRELR-REGANYDSIYICSSTFACAQLAAGAACRLVEAVL 595
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAEPD A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 596 AGEVLNGIAVVRPPGHHAEPDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 649
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHGN TQ +F +DP VL+ S+HR++ GTF+P ++G T IG+ G G+ +NV W
Sbjct: 650 DIHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGP 709
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 710 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 769
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLED---------KPVAGSSEAYP-----FE 351
A G I+L LEGGYNL SIS S+ AC LL D P++G+ ++
Sbjct: 770 LANGHIILILEGGYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQDSITKTIQVHR 829
Query: 352 STWRVIQAVRKK 363
WR ++ +++K
Sbjct: 830 RYWRSLRVMKRK 841
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/365 (38%), Positives = 214/365 (58%), Gaps = 5/365 (1%)
Query: 7 EGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
E RT+ GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+
Sbjct: 79 EARTLSG-TGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLIQEGLLDRCVSFQARFAE 137
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAE 126
+ L+ VH+ +++L++ + + +A +S+YL+ S A LA+GSV+ + +
Sbjct: 138 KEELMLVHSLEYIDLMET-TQYMNEGELHVLADTYDSVYLHPNSYTCACLASGSVLRLVD 196
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
V E E+ + AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWD
Sbjct: 197 AVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKH---DIQRVLIVDWD 253
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHG Q F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW
Sbjct: 254 VHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQVG 313
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
DADY+A + H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM
Sbjct: 314 MQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMPATPAGFAQLTHLLMGL 373
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSA 366
A+GK++L+LEGGYNL S++ V A ++ LL D S P S + + L
Sbjct: 374 AEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCPSAQVSLSCALEALEP 433
Query: 367 FWPTL 371
FW +L
Sbjct: 434 FWESL 438
>gi|417413582|gb|JAA53111.1| Putative histone deacetylase complex catalytic component hda1,
partial [Desmodus rotundus]
Length = 1165
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/426 (39%), Positives = 244/426 (57%), Gaps = 24/426 (5%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+RM H ++HPE P R+ I +L+ G+ RC+ L A+ A D L
Sbjct: 490 LQARTGLVYDQRMMDHYNLWDNHHPEIPQRVSRIMCRLEELGLAGRCLTLPARPATDAEL 549
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R ++ SIY+ + A LA G+ + E V
Sbjct: 550 LTCHSAEYVGRLR--ATEKMKTRELHRESANFESIYICPSTFACAQLATGATCCLVEAVL 607
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 608 AGEVLNGIAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 661
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ +F +DP VL+ S+HR++ GTF+P D+G +G G G+ +NV W
Sbjct: 662 DVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGTSNQVGRSAGTGFTVNVAWNGP 721
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GD++YLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+++P GY+ + LM
Sbjct: 722 RVGDSEYLAAWHRLVLPIAYEFNPELVLVSAGFDAAWGDPLGGCQLSPEGYAHLTHLLMG 781
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLS 365
A G I+L LEGGYNL SIS S+ AC LL D P + P I +
Sbjct: 782 LAGGHIILILEGGYNLTSISESMAACTRTLLGDPPPLLTLSRPPLSGALASITDTIQVHR 841
Query: 366 AFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQV-ALSKLKVDDGHAE 424
+W +L TK+ + P SS+ E T+ + ++ L K+D G
Sbjct: 842 KYWRSLR---ATKIEDKEGP----FSSTSVTKEATQPANPGSTGRLTTLEGYKLDAG--- 891
Query: 425 LGMATP 430
+G ATP
Sbjct: 892 MGKATP 897
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 213/358 (59%), Gaps = 6/358 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 100 TGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIREGLLDRCVSFQARFAEKEELMLVH 159
Query: 75 TENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ +++L++ +++ + RI A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 160 SLEYIDLME--TTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEI 217
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ AI+RPPGHHA+ G+C++N+VAVAA + + + I ++LIVDWDVHHG T
Sbjct: 218 QNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARY---AQVKHRIQRVLIVDWDVHHGQGT 274
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F +DP VL+FS+HR+E G F+P ++ IG G G GY INVPW DADY+
Sbjct: 275 QFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQVGMRDADYI 334
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + +LLPVA +F P +++++AGFDA GDP G TP G++ + LM A G+++L
Sbjct: 335 AAFLRVLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMGLAGGRLIL 394
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+LEGGYNL S++ V A ++ LL D S P S + + L FW TL
Sbjct: 395 SLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCTSALSSLSCTLEALEPFWETL 452
>gi|449672323|ref|XP_002164574.2| PREDICTED: histone deacetylase 6-like [Hydra magnipapillata]
Length = 424
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 233/363 (64%), Gaps = 14/363 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ GL+YD++MC++ + H E P RI +I+N L G+ RC +L ++ A +L
Sbjct: 26 KTGLIYDQKMCEYFNLEDKNHVERPARISSIYNALNKNGLTCRCQILKSRFASHDEILLK 85
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H E+H+ +I+++S+K D +++ +SIY + SSE+++L+ G +EV E+V + +
Sbjct: 86 HNEHHLKVIESLSTKT-DEELGKMSFDYDSIYFHPNSSESSFLSVGCTLEVVEQVLKKNI 144
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ AIVRPPGHHA +MGFC +NNVA+AA + + + G+ ++LIVDWD+H GN
Sbjct: 145 LNGVAIVRPPGHHALTHCSMGFCHFNNVAIAAEYAV---KKYGLKRVLIVDWDIHFGNGI 201
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
KMF D VL+FS+HR++ F+P +G Y IG+G G G+N+NV W DADY+
Sbjct: 202 HKMFENDNYVLYFSMHRYDNQRFWPCLAEGNYNSIGKGDGEGFNVNVAWNKSGMNDADYI 261
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ H+LLP+AK++ P+++++SAGFD+ GDPLG C+VTP GY+ M K+LM A GK+V+
Sbjct: 262 LAFKHVLLPIAKEYNPELVLVSAGFDSGKGDPLGNCKVTPAGYAQMTKELMSLADGKVVI 321
Query: 314 ALEGGYNLGSISNSVLACMNVLLED--KPVAGSSEAYPFESTWRVIQAVRKKLSA---FW 368
LEGGYNL ++++S+ +C+ LL D V S+ +S+ Q+V K L A +W
Sbjct: 322 VLEGGYNLKTLASSMSSCLATLLGDPINVVINSN-----KSSLSAKQSVAKTLFAIQKYW 376
Query: 369 PTL 371
+L
Sbjct: 377 KSL 379
>gi|351706522|gb|EHB09441.1| Histone deacetylase 6 [Heterocephalus glaber]
Length = 1489
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 210/333 (63%), Gaps = 13/333 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YDERM H +HPE P RI I L+ G+ RCV L + A + L
Sbjct: 882 LQARTGLIYDERMMSHCNLWDSHHPETPQRILRIMCHLEELGLAGRCVTLPVRPATEAEL 941
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R + +SIY+ + A LA GS + E V
Sbjct: 942 LTCHSAEYVERLR--ATEKMKTRELHREGANFDSIYICPSTFTCAQLATGSACRLVEAVL 999
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 1000 SGEVLNGVAVVRPPGHHAEQDTACGFCFFNSVAVAA------RHAQAISGHAMRILIVDW 1053
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHGN TQ +F DP VL+ S+HR + GTF+P D+G + +G+ G G+ +NV W
Sbjct: 1054 DIHHGNGTQHIFEDDPSVLYVSLHRFDRGTFFPMGDEGASSQVGKAAGTGFTVNVAWNGP 1113
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDA+YLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 1114 RVGDAEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 1173
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
A G+I+L LEGGYNL SIS S+ AC + LL D
Sbjct: 1174 LANGRIILILEGGYNLTSISESMAACTHALLGD 1206
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 213/358 (59%), Gaps = 6/358 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 491 TGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 550
Query: 75 TENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ ++L++ +++ + R R+ A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 551 SLEFIDLME--TTQHMNERELRLLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEI 608
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG T
Sbjct: 609 RNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKH---RIQRVLIVDWDVHHGQGT 665
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+
Sbjct: 666 QFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYI 725
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L
Sbjct: 726 AAFLHILLPVAFEFQPQLVLVAAGFDAIQGDPKGEMATTPAGFAQLTHLLMGLAGGKLIL 785
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+LEGGYNL S++ V A +++LL D S P S I + + L FW L
Sbjct: 786 SLEGGYNLRSLAEGVSASLHILLGDPCPMLESPGAPCPSAQASISSTLEALEPFWEVL 843
>gi|150864507|ref|XP_001383345.2| hypothetical protein PICST_71431 [Scheffersomyces stipitis CBS
6054]
gi|149385763|gb|ABN65316.2| histone deacetylase A [Scheffersomyces stipitis CBS 6054]
Length = 807
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 225/385 (58%), Gaps = 27/385 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ GL+YD RM H Y HPE+P RI I+ KL AG I
Sbjct: 102 KTGLVYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKKLAEAGLIVDSSLSGVEDIGP 161
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI---ASKLNSIYLNEGSSE 112
V + +EA + +L VH+E+H+ I++ + R+R+ K +SIY+N S
Sbjct: 162 LMVKIPIREATAEEILEVHSESHLKFIQSTETMS----RERLLEETEKGDSIYVNNDSYF 217
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + ++ AIVRPPGHHAEP+ GFCL++NVAVAA +L
Sbjct: 218 SAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPETPGGFCLFSNVAVAAKNILKAY 277
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + KI+IVDWD+HHGN TQK F+ DPRVL+ S+HR+E G FYP G +GE
Sbjct: 278 PE-SVRKIVIVDWDIHHGNGTQKSFYDDPRVLYISLHRYENGRFYPGTKYGGADQVGEKD 336
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G GYN+N+PW N D DY+ ++ ++LPV +F PD+II+S+GFDAA GD +GGC VT
Sbjct: 337 GEGYNLNIPWRNPGMHDGDYIYAFNRVVLPVILEFDPDLIIVSSGFDAADGDIIGGCHVT 396
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL SIS S L VL+ + P A S P
Sbjct: 397 PAGYGYMTHLLKGIAKGKLAVILEGGYNLDSISKSALGVAKVLVGEPPEATVS-MQPHLE 455
Query: 353 TWRVIQAVRKKLSAFWPTLADELPT 377
T VI V K S +W +L +PT
Sbjct: 456 TIEVIDEVVKVQSRYWKSLRYGVPT 480
>gi|149643027|ref|NP_001092430.1| histone deacetylase 6 [Bos taurus]
gi|148744044|gb|AAI42299.1| HDAC6 protein [Bos taurus]
gi|296470726|tpg|DAA12841.1| TPA: histone deacetylase 6 [Bos taurus]
Length = 1129
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 226/371 (60%), Gaps = 25/371 (6%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD++M H+ +YHPE P RI I + L G+ +RC L A+ A D L
Sbjct: 478 LQARTGLVYDQQMMDHHNLWDNYHPEMPQRIHFIMHHLDELGLAKRCHSLPARPATDAEL 537
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ H+ ++ + R R + +SIY+ + A LAAG+ + E V
Sbjct: 538 LTCHSAEHLERLRATEKMKTRELR-REGANYDSIYICSSTFACAQLAAGAACRLVEAVLA 596
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDWD 186
GE+ + A+VRPPGHHAEPD A GFC +N+VAVAA R I+ +ILIVDWD
Sbjct: 597 GEVLNGVAVVRPPGHHAEPDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDWD 650
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
+HHGN TQ +F +DP VL+ S+HR++ GTF+P ++G T IG+ G G+ +NV W R
Sbjct: 651 IHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGPR 710
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
GDADYLA W ++LPVA +F P+++++SAGFDAA GDPLGGC+V+P GY+ + +LM
Sbjct: 711 MGDADYLAAWHRLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMGL 770
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLED---------KPVAGSSEAYP-----FES 352
A G I+L LEGGYNL SIS S+ AC LL D P++G+ +
Sbjct: 771 ANGHIILILEGGYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQASITKTIQVHRR 830
Query: 353 TWRVIQAVRKK 363
WR ++ +++K
Sbjct: 831 YWRSLRVMKRK 841
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/365 (38%), Positives = 214/365 (58%), Gaps = 5/365 (1%)
Query: 7 EGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
E RT+ GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+
Sbjct: 79 ESRTLSG-TGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLIQEGLLDRCVSFQARFAE 137
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAE 126
+ L+ VH+ +++L++ + + +A +S+YL+ S A LA+GSV+ + +
Sbjct: 138 KEELMLVHSLEYIDLMET-TQYMNEEELHVLADTYDSVYLHPNSYTCACLASGSVLRLVD 196
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
V E E+ + AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWD
Sbjct: 197 AVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKH---DIQRVLIVDWD 253
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHG Q F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW
Sbjct: 254 VHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQVG 313
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
DADY+A + H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM
Sbjct: 314 MQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGL 373
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSA 366
A+GK++L+LEGGYNL S++ V A ++ LL D S P S + + L
Sbjct: 374 AEGKLILSLEGGYNLHSLAEGVSATLHTLLGDPCPVLESPGAPCPSAQASLSCTLEALEP 433
Query: 367 FWPTL 371
FW +L
Sbjct: 434 FWESL 438
>gi|440912760|gb|ELR62301.1| Histone deacetylase 6, partial [Bos grunniens mutus]
Length = 1151
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 226/372 (60%), Gaps = 25/372 (6%)
Query: 10 TIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
++ R GL+YD++M H+ +YHPE P RI I + L G+ +RC L A+ A D
Sbjct: 499 VLQARTGLVYDQQMMDHHNLWDNYHPEMPQRIHFIMHHLDELGLAKRCHSLPARPATDAE 558
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
LL+ H+ H+ ++ + R R + +SIY+ + A LAAG+ + E V
Sbjct: 559 LLTCHSAEHLERLRATEKMKTRELR-REGANYDSIYICSSTFACAQLAAGAACRLVEAVL 617
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAEPD A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 618 AGEVLNGVAVVRPPGHHAEPDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 671
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHGN TQ +F +DP VL+ S+HR++ GTF+P ++G T IG+ G G+ +NV W
Sbjct: 672 DIHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGP 731
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LPVA +F P+++++SAGFDAA GDPLGGC+V+P GY+ + +LM
Sbjct: 732 RMGDADYLAAWHRLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMG 791
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLED---------KPVAGSSEAYP-----FE 351
A G I+L LEGGYNL SIS S+ AC LL D P++G+ +
Sbjct: 792 LANGHIILILEGGYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQASITKTIQVHR 851
Query: 352 STWRVIQAVRKK 363
WR ++ +++K
Sbjct: 852 RYWRSLRVMKRK 863
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 200/340 (58%), Gaps = 4/340 (1%)
Query: 32 DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFD 91
D PE P R+ AI +L G+ RCV A+ A+ + L+ VH+ +++L++ + +
Sbjct: 125 DSFPERPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMET-TQYMNE 183
Query: 92 SRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDE 151
+A +S+YL+ S A LA+GSV+ + + V E E+ + AI+RPPGHHA+
Sbjct: 184 EELHVLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLEAEIRNGMAIIRPPGHHAQHSL 243
Query: 152 AMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH 211
G+C++N+VAVAA + + I ++LIVDWDVHHG Q F +DP VL+FS+HR+
Sbjct: 244 MDGYCMFNHVAVAARYAQQKH---DIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHRY 300
Query: 212 EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
E G F+P ++ G G G GY INVPW DADY+A + H+LLPVA +F P +
Sbjct: 301 EQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQL 360
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLAC 331
++++AGFDA GDP G TP G++ + LM A+GK++L+LEGGYNL S++ V A
Sbjct: 361 VLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAEGKLILSLEGGYNLHSLAEGVSAT 420
Query: 332 MNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
++ LL D S P S + + L FW +L
Sbjct: 421 LHTLLGDPCPVLESPGAPCPSAQASLSCTLEALEPFWESL 460
>gi|431893569|gb|ELK03432.1| Histone deacetylase 6 [Pteropus alecto]
Length = 1140
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 147/325 (45%), Positives = 209/325 (64%), Gaps = 11/325 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD++M H ++HPE P RI I +L+ G+ +RC++L A+ A D L
Sbjct: 478 LQARTGLVYDQQMMGHYNLWDNHHPEMPQRISQIMCRLEELGLSRRCLILPARPATDAEL 537
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ H+ +V ++ + K R + +SIY+ + A LAAGS + E V
Sbjct: 538 LTCHSAEYVGRLR-ATEKMKPRELHREGANFDSIYICPSTFACAKLAAGSTCCLVEAVLA 596
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDWD 186
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDWD
Sbjct: 597 GEVLNGVAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQVISGHALRILIVDWD 650
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHGN TQ +F +DP +L+ S+HR++ GTF+P D+G +G G+G+ +NV W R
Sbjct: 651 VHHGNGTQHIFEEDPSILYISLHRYDHGTFFPMGDEGASNQVGWAAGMGFTVNVAWNGPR 710
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
GDA+YLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 711 MGDAEYLAAWHRVVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGL 770
Query: 307 AQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 771 ASGRIILILEGGYNLTSISESMAAC 795
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/358 (39%), Positives = 210/358 (58%), Gaps = 6/358 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 85 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 144
Query: 75 TENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ +++L++ +++ + RI A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 145 SLEYIDLME--TTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEI 202
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ AI+RPPGHHA+ G+C++N+VAVAA + + GI ++LIVDWDVHHG T
Sbjct: 203 RNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKH---GIQRVLIVDWDVHHGQGT 259
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+
Sbjct: 260 QFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYI 319
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + +LLPVA +F P +++++AGFDA GDP G TP G++ + LM A G+++L
Sbjct: 320 AAFLQVLLPVALEFHPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGRLIL 379
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+LEGGYNL S++ V A ++ LL D S P S + + L FW L
Sbjct: 380 SLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCPSAQSSLSCALEALEPFWEVL 437
>gi|344292665|ref|XP_003418046.1| PREDICTED: histone deacetylase 6-like [Loxodonta africana]
Length = 1119
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 208/323 (64%), Gaps = 13/323 (4%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R GL+YD RM H ++HPE P RI I L+ G+ +RC+ L A+ A D LL+
Sbjct: 475 RTGLIYDRRMMNHYNLWDNHHPEMPQRISRIMCHLEGLGLTERCLTLPARPATDAELLTC 534
Query: 74 HTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
H+ ++ ++ +++ +R R + +SIY+ + A LA G+V + E V GE
Sbjct: 535 HSAEYIARLR--ATENMKTRELHREGANFDSIYICPSTFTCAQLATGAVCRLVEAVLAGE 592
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDWDVH 188
+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDWD+H
Sbjct: 593 VLNGTAVVRPPGHHAEWDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDWDIH 646
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ +F DP VL+ S+HR++ GTF+P ++G + IG+ PG+G+ +NV W R G
Sbjct: 647 HGNGTQHIFEDDPSVLYMSLHRYDHGTFFPMGNEGASSQIGQAPGVGFTVNVAWNGPRMG 706
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
D DYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM A
Sbjct: 707 DPDYLAAWHRLVLPIAYEFNPELVLVSAGFDAAQGDPLGGCQVSPEGYAHLTHLLMGLAN 766
Query: 309 GKIVLALEGGYNLGSISNSVLAC 331
G+I+L LEGGYNL SIS S+ AC
Sbjct: 767 GRIILILEGGYNLTSISESMAAC 789
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 211/364 (57%), Gaps = 6/364 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+++E++ + + D PE R+ AI +L G+ RC+ A+ AK + L+ VH
Sbjct: 86 TGLVFEEQLNEFHCLWDDSFPECSERLHAIKEQLTQEGLLDRCISFQARSAKKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ +++L++ +++ + RI A+ +S+YL+ S A LA+GSV+ + + V ++
Sbjct: 146 SLEYIDLME--TTQYMNEAELRILANTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAKV 203
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ A++RPPGHHA+ + G+C++N+VAVAA + + I ++LIVDWDVHHG T
Sbjct: 204 RNGMAVIRPPGHHAQHNLMDGYCMFNHVAVAARYAQQKH---DIQRVLIVDWDVHHGQGT 260
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F +DP VL+FS+HR+E G F+P ++ G G G GYNINVPW DADY+
Sbjct: 261 QFTFDQDPSVLYFSIHRYEHGQFWPHLKASNWSATGFGRGQGYNINVPWNQVGMRDADYI 320
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + ILLPVA +F P +++++AG+DA GDP G TP G++ + LM A GK++L
Sbjct: 321 AAFLRILLPVALEFQPQLVLVAAGYDALQGDPKGKMAATPAGFAQLTHMLMGLAGGKLIL 380
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
+LEGGYN S++ V A ++ LL D S P S I L FW L
Sbjct: 381 SLEGGYNYRSLAEGVSASLHTLLGDPCPMLESPGAPCLSARTSISCTLVALKPFWEVLMQ 440
Query: 374 ELPT 377
T
Sbjct: 441 SAET 444
>gi|157114211|ref|XP_001657988.1| histone deacetylase [Aedes aegypti]
gi|108883594|gb|EAT47819.1| AAEL001069-PA [Aedes aegypti]
Length = 1059
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 218/361 (60%), Gaps = 10/361 (2%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV +YDE + +H D HPE P+R+ I+ + + + R L + A L V
Sbjct: 462 RVCFVYDESLLEHRNVHED-HPEQPDRVAKIYTRHEEYKLLARMKRLKPRHATTTELCMV 520
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+ HVN+I+ ++ ++A + NS+Y + + E A LAAGSV++V + V G+
Sbjct: 521 HSRQHVNVIRRTVERE---EMKQVADQFNSVYFHPKTFECATLAAGSVLQVVDEVLNGQS 577
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S IVRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 578 RSGVCIVRPPGHHAESDMPHGFCIFNNVAIAAQYAIRDH---GLKRVLIVDWDVHHGNGT 634
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F DPRVL+ SVHR++ GTF+P + D + ++G G G G+N+N+PW GD +Y
Sbjct: 635 QHIFESDPRVLYISVHRYDNGTFFPKSTDANFDVVGSGSGEGFNVNIPWNKKGMGDQEYS 694
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + ++LPVA +F P+++++SAGFDAA GDPLGGC+VTP Y L A G+IV+
Sbjct: 695 AAFQQVILPVAYEFDPELVLVSAGFDAAIGDPLGGCKVTPEAYGFFTHWLSSLANGRIVV 754
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAY--PFESTWRVIQAVRKKLSAFWPT 370
LEGGYN+ SIS+++ C LL D P+ S Y P + ++ V FW +
Sbjct: 755 CLEGGYNVNSISHAMALCTKSLLGDPLPMLHLSSRYNGPNAACVETLRNVLSVQEKFWKS 814
Query: 371 L 371
L
Sbjct: 815 L 815
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 237/442 (53%), Gaps = 13/442 (2%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ GL+YDER +H + +PE P R + + + G+ RC ++ + A ++ +
Sbjct: 29 VRGETGLVYDERFAEHRCLWDEGYPECPERFTRVLERCRELGLVDRCKMIEPRMATEEEI 88
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ HT V +++ + R + ++S ++++++ S + + LA GS IE+ + V
Sbjct: 89 LTKHTPEQVEILRGTKGSEDLERLEELSSHYDAVFVHPSSYDCSLLACGSTIELVDAVVG 148
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + + AI+RPPGHHA E G+C +NNVA+AA L+ LG+ KIL+VDWD+HHG
Sbjct: 149 GRVQNGMAIIRPPGHHAMKAEYNGYCFFNNVAIAAQHALDR---LGLKKILVVDWDIHHG 205
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+MF+ DPRVL+FS+HR+E G F+P + + +GEG GLGYN NVP +
Sbjct: 206 QGTQRMFYDDPRVLYFSIHRYECGKFWPNLRESDFDYVGEGAGLGYNFNVPLNRIGMANG 265
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA+W ILLPVA +F P++++ISAG+DAA G P G +TP Y +L LM AQG+
Sbjct: 266 DYLAIWQQILLPVAMEFQPELVLISAGYDAAYGCPEGQMEITPAFYPHLLTPLMSLAQGR 325
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWP 369
+ + LEGGY L S++ + LL D P+ P ES + I FW
Sbjct: 326 VAVILEGGYCLSSLAEGGALTLRTLLGDPCPLLVEKLQPPCESMQQTILNCIHTHRPFWK 385
Query: 370 TLADELPTKLTSLK----APPAHMI----SSSDSEDEDTKVETLEAV-LQVALSKLKVDD 420
L L L P H + + + E + ET LQ K ++++
Sbjct: 386 NLQLNDTYGLEELNNVNPQPNFHQVIQYYVQPEPQPEPVRYETRNCYPLQSTEEKARIEE 445
Query: 421 GHAELGMATPWRSELSKVDVFY 442
A L +AT ++V Y
Sbjct: 446 RLAMLQIATRLTFPANRVCFVY 467
>gi|358060177|dbj|GAA94236.1| hypothetical protein E5Q_00885 [Mixia osmundae IAM 14324]
Length = 724
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 158/375 (42%), Positives = 222/375 (59%), Gaps = 15/375 (4%)
Query: 11 IKRRVGLLYDERMCKHNTPDGD------YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE 64
++ R G +YD+ M H GD HPE P+RI I + + A + + + L +
Sbjct: 40 VQPRTGYVYDKHMMLHRDEYGDPMLPEDQHPEQPSRISRIMHTILEADLLKCMLRLQIRS 99
Query: 65 AKDKNLLSVHTE---NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSV 121
A + +H+ + + + + D R R + +S+Y+N ++ A L+ G V
Sbjct: 100 ASREEACLIHSAQLWDELEITSTLDQAVLDDREFRQHLRYHSLYVNHHTATCAKLSLGGV 159
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE--LGINK 179
+ A VAE +++AFAIVRPPGHHA+PD++ GFC +NNVAV A +LL E I +
Sbjct: 160 LVSAIAVAEKRVSNAFAIVRPPGHHADPDQSSGFCFFNNVAVTAKYLLCHYREGPAPIQR 219
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFG---TFYPANDDGFYTMIGEGPGLGY 236
ILI+DWD+HHGN TQ F+ DP VLF S+HR + FYP + T +GEG G G
Sbjct: 220 ILILDWDIHHGNGTQTAFYDDPNVLFVSIHRFDIRGGERFYPGRPEADMTFVGEGAGRGK 279
Query: 237 NINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY 296
N+N+PW+ GDADYL +D I++P+A++F PD ++ISAGFDAA GD LGGC V+P GY
Sbjct: 280 NVNIPWDQAAMGDADYLYAFDTIVMPLAREFAPDFVLISAGFDAAKGDELGGCLVSPAGY 339
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV 356
+ M +L A G++V ALEGGYN+ +IS S LAC+ V+L D P A S A P S +
Sbjct: 340 AHMTHRLASLAGGRLVAALEGGYNIEAISQSALACIRVMLGDAPPALPSLA-PCASAVKT 398
Query: 357 IQAVRKKLSAFWPTL 371
I V S FW T+
Sbjct: 399 IHDVVAIQSRFWKTM 413
>gi|451845968|gb|EMD59279.1| hypothetical protein COCSADRAFT_41143 [Cochliobolus sativus ND90Pr]
Length = 842
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 160/375 (42%), Positives = 224/375 (59%), Gaps = 19/375 (5%)
Query: 14 RVGLLYDERMCKH------NTPDGDYHPENPNRIKAIWNKLQAAGI----------PQRC 57
+ GL+YD RM H N D HPE+P RI +I+ +L+ AG+ C
Sbjct: 115 KTGLVYDPRMRFHAELPDMNINPDDIHPEDPRRIHSIFEELKQAGLVASSTSEEDKEDHC 174
Query: 58 VVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLA 117
+ A+ A +L +HTE H +L+++ + D + A +L+SIYLN + E A LA
Sbjct: 175 WRIAARFATRPEILLIHTEEHYDLVESFQNMTSDELKFE-AERLDSIYLNNSTYECAKLA 233
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
AG IE + V +G + +A AI+RPPGHHAE D+ GFC++NNV +AA N PE
Sbjct: 234 AGGAIEACKAVVQGAVRNAIAIIRPPGHHAESDQPSGFCIFNNVPIAARVCQNAYPET-C 292
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
K+LI+DWDVHHGN Q F+ DP VL+ S+H + GTFYP DG GEG G G N
Sbjct: 293 RKVLILDWDVHHGNGIQHAFYDDPNVLYISLHVFKDGTFYPNLPDGNLDYCGEGRGEGKN 352
Query: 238 INVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
+N+PW GD++YL + +++P+A +F PD++IISAGFDAA GD LGGC VTP Y
Sbjct: 353 VNIPWAEHGMGDSEYLYAFQQVVMPIATEFNPDLVIISAGFDAAEGDLLGGCFVTPACYG 412
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSE-AYPFESTWRV 356
M LM A+GK+V+ LEGGYNL SI+ S LA VL+ + P + P +S +
Sbjct: 413 HMTHMLMSLAKGKLVVCLEGGYNLRSIARSALAVTKVLMLEPPDRLRDDLPAPKDSAVYI 472
Query: 357 IQAVRKKLSAFWPTL 371
++ V+++ S +W +L
Sbjct: 473 VENVKRQHSKYWKSL 487
>gi|33115103|gb|AAP95014.1|AF307341_1 putative histone deacetylase [Cochliobolus carbonum]
Length = 847
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 160/375 (42%), Positives = 223/375 (59%), Gaps = 19/375 (5%)
Query: 14 RVGLLYDERMCKH------NTPDGDYHPENPNRIKAIWNKLQAAGI----------PQRC 57
+ GL+YD RM H N D HPE+P RI +I+ +L+ AG+ C
Sbjct: 115 KTGLVYDPRMRFHAELPDMNINPDDIHPEDPRRIHSIFEELKQAGLVASSTSEEDKEDHC 174
Query: 58 VVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLA 117
+ A+ A +L +HTE H +L+K+ + D + A +L+SIYLN + E A LA
Sbjct: 175 WRIAARFATRPEILLIHTEEHYDLVKSFQNMTSDELKFE-AERLDSIYLNNSTYECAKLA 233
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
AG IE + V +G + +A AI+RPPGHHAE D+ GFC++NNV +A N PE
Sbjct: 234 AGGAIEACKAVVQGAVRNAIAIIRPPGHHAESDQPSGFCIFNNVPIATRVCQNAYPET-C 292
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
K+LI+DWDVHHGN Q F+ DP VL+ S+H + GTFYP DG GEG G G N
Sbjct: 293 RKVLILDWDVHHGNGIQHAFYDDPNVLYISLHVFKDGTFYPNLPDGNLDYCGEGRGEGKN 352
Query: 238 INVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
+N+PW GD++YL + +++P+A +F PD++IISAGFDAA GD LGGC VTP Y
Sbjct: 353 VNIPWAEHGMGDSEYLYAFQQVVMPIATEFNPDLVIISAGFDAAEGDLLGGCFVTPACYG 412
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSE-AYPFESTWRV 356
M LM A+GK+V+ LEGGYNL SI+ S LA VL+ + P + P +S +
Sbjct: 413 HMTHMLMSLAKGKLVVCLEGGYNLRSIARSALAVTKVLMLEPPDRLRDDLPAPKDSAVYI 472
Query: 357 IQAVRKKLSAFWPTL 371
++ V+++ S +W +L
Sbjct: 473 VENVKRQHSKYWKSL 487
>gi|397471377|ref|XP_003807272.1| PREDICTED: histone deacetylase 6 isoform 2 [Pan paniscus]
Length = 1229
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 491 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 550
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 551 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 608
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 609 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 662
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 663 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 722
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 723 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 782
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 783 LASGRIILILEGGYNLTSISESMAAC 808
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 207/363 (57%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 100 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 159
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 160 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 218
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 219 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 275
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 276 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 335
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 336 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 395
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 396 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRS 455
Query: 375 LPT 377
T
Sbjct: 456 TET 458
>gi|119571130|gb|EAW50745.1| histone deacetylase 6, isoform CRA_b [Homo sapiens]
Length = 807
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 69 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 128
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 129 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 186
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 187 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 240
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 241 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 300
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 301 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 360
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 361 LASGRIILILEGGYNLTSISESMAAC 386
>gi|302565168|ref|NP_001181125.1| histone deacetylase 6 [Macaca mulatta]
gi|380786031|gb|AFE64891.1| histone deacetylase 6 [Macaca mulatta]
gi|383409519|gb|AFH27973.1| histone deacetylase 6 [Macaca mulatta]
gi|384941172|gb|AFI34191.1| histone deacetylase 6 [Macaca mulatta]
Length = 1215
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 477 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 536
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 537 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 595 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGRALRILIVDW 648
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 649 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 708
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 768
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 769 LASGRIILILEGGYNLTSISESMAAC 794
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 438
>gi|397471375|ref|XP_003807271.1| PREDICTED: histone deacetylase 6 isoform 1 [Pan paniscus]
gi|397471379|ref|XP_003807273.1| PREDICTED: histone deacetylase 6 isoform 3 [Pan paniscus]
Length = 1215
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 477 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 536
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 537 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 595 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 648
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 649 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 708
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 768
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 769 LASGRIILILEGGYNLTSISESMAAC 794
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 207/363 (57%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRS 441
Query: 375 LPT 377
T
Sbjct: 442 TET 444
>gi|402910095|ref|XP_003917726.1| PREDICTED: histone deacetylase 6 isoform 1 [Papio anubis]
gi|402910097|ref|XP_003917727.1| PREDICTED: histone deacetylase 6 isoform 2 [Papio anubis]
Length = 1215
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 477 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 536
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 537 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 595 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGRALRILIVDW 648
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 649 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 708
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 768
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 769 LASGRIILILEGGYNLTSISESMAAC 794
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 438
>gi|358060178|dbj|GAA94237.1| hypothetical protein E5Q_00886 [Mixia osmundae IAM 14324]
Length = 694
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/375 (42%), Positives = 222/375 (59%), Gaps = 15/375 (4%)
Query: 11 IKRRVGLLYDERMCKHNTPDGD------YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE 64
++ R G +YD+ M H GD HPE P+RI I + + A + + + L +
Sbjct: 40 VQPRTGYVYDKHMMLHRDEYGDPMLPEDQHPEQPSRISRIMHTILEADLLKCMLRLQIRS 99
Query: 65 AKDKNLLSVHTE---NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSV 121
A + +H+ + + + + D R R + +S+Y+N ++ A L+ G V
Sbjct: 100 ASREEACLIHSAQLWDELEITSTLDQAVLDDREFRQHLRYHSLYVNHHTATCAKLSLGGV 159
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE--LGINK 179
+ A VAE +++AFAIVRPPGHHA+PD++ GFC +NNVAV A +LL E I +
Sbjct: 160 LVSAIAVAEKRVSNAFAIVRPPGHHADPDQSSGFCFFNNVAVTAKYLLCHYREGPAPIQR 219
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFG---TFYPANDDGFYTMIGEGPGLGY 236
ILI+DWD+HHGN TQ F+ DP VLF S+HR + FYP + T +GEG G G
Sbjct: 220 ILILDWDIHHGNGTQTAFYDDPNVLFVSIHRFDIRGGERFYPGRPEADMTFVGEGAGRGK 279
Query: 237 NINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY 296
N+N+PW+ GDADYL +D I++P+A++F PD ++ISAGFDAA GD LGGC V+P GY
Sbjct: 280 NVNIPWDQAAMGDADYLYAFDTIVMPLAREFAPDFVLISAGFDAAKGDELGGCLVSPAGY 339
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV 356
+ M +L A G++V ALEGGYN+ +IS S LAC+ V+L D P A S A P S +
Sbjct: 340 AHMTHRLASLAGGRLVAALEGGYNIEAISQSALACIRVMLGDAPPALPSLA-PCASAVKT 398
Query: 357 IQAVRKKLSAFWPTL 371
I V S FW T+
Sbjct: 399 IHDVVAIQSRFWKTM 413
>gi|355704778|gb|EHH30703.1| Histone deacetylase 6 [Macaca mulatta]
Length = 1270
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 532 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 591
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 592 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 649
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 650 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGRALRILIVDW 703
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 704 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 763
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 764 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 823
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 824 LASGRIILILEGGYNLTSISESMAAC 849
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 208/367 (56%), Gaps = 14/367 (3%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 131 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 190
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 191 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 249
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 250 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKH---CIRRVLIVDWDVHHGQGTQ 306
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN--------GR 246
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW +
Sbjct: 307 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVSIHPPFVPK 366
Query: 247 CG--DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM 304
G DADY+A + H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM
Sbjct: 367 VGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLM 426
Query: 305 DFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKL 364
A GK++L+LEGGYNL +++ V A ++ LL D S P S + + L
Sbjct: 427 GLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEAL 486
Query: 365 SAFWPTL 371
FW L
Sbjct: 487 EPFWEVL 493
>gi|410226690|gb|JAA10564.1| histone deacetylase 6 [Pan troglodytes]
gi|410256994|gb|JAA16464.1| histone deacetylase 6 [Pan troglodytes]
gi|410292322|gb|JAA24761.1| histone deacetylase 6 [Pan troglodytes]
gi|410356007|gb|JAA44515.1| histone deacetylase 6 [Pan troglodytes]
Length = 1215
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 477 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 536
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 537 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 595 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 648
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 649 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 708
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 768
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 769 LASGRIILILEGGYNLTSISESMAAC 794
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 438
>gi|402910099|ref|XP_003917728.1| PREDICTED: histone deacetylase 6 isoform 3 [Papio anubis]
Length = 1229
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 491 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 550
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 551 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 608
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 609 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGRALRILIVDW 662
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 663 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 722
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 723 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 782
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 783 LASGRIILILEGGYNLTSISESMAAC 808
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 207/363 (57%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 100 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 159
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 160 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 218
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 219 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 275
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 276 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 335
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 336 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 395
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 396 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRS 455
Query: 375 LPT 377
T
Sbjct: 456 TET 458
>gi|426395814|ref|XP_004064155.1| PREDICTED: histone deacetylase 6 isoform 1 [Gorilla gorilla
gorilla]
gi|426395818|ref|XP_004064157.1| PREDICTED: histone deacetylase 6 isoform 3 [Gorilla gorilla
gorilla]
Length = 1215
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 477 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 536
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 537 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 595 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 648
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 649 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 708
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 768
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 769 LASGRIILILEGGYNLTSISESMAAC 794
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 438
>gi|384944566|gb|AFI35888.1| histone deacetylase 6 [Macaca mulatta]
Length = 1219
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 481 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 540
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 541 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 598
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 599 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGRALRILIVDW 652
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 653 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 712
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 713 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 772
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 773 LASGRIILILEGGYNLTSISESMAAC 798
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 438
>gi|297303809|ref|XP_001101533.2| PREDICTED: histone deacetylase 6-like isoform 7 [Macaca mulatta]
Length = 1261
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 523 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 582
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 583 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 640
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 641 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGRALRILIVDW 694
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 695 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 754
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 755 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 814
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 815 LASGRIILILEGGYNLTSISESMAAC 840
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 207/363 (57%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 132 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 191
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 192 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 250
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 251 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 307
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 308 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 367
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 368 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 427
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 428 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRS 487
Query: 375 LPT 377
T
Sbjct: 488 TET 490
>gi|426395816|ref|XP_004064156.1| PREDICTED: histone deacetylase 6 isoform 2 [Gorilla gorilla
gorilla]
Length = 1261
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 523 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 582
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 583 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 640
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 641 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 694
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 695 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 754
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 755 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 814
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 815 LASGRIILILEGGYNLTSISESMAAC 840
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 207/363 (57%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 132 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 191
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 192 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 250
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 251 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 307
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 308 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 367
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 368 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 427
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 428 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRS 487
Query: 375 LPT 377
T
Sbjct: 488 TET 490
>gi|193787785|dbj|BAG52988.1| unnamed protein product [Homo sapiens]
Length = 876
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 138 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 197
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 198 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 255
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 256 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 309
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 310 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 369
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 370 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 429
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 430 LASGRIILILEGGYNLTSISESMAAC 455
>gi|109130611|ref|XP_001101619.1| PREDICTED: histone deacetylase 6-like isoform 8 [Macaca mulatta]
Length = 1229
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 491 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 550
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 551 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 608
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 609 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGRALRILIVDW 662
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 663 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 722
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 723 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 782
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 783 LASGRIILILEGGYNLTSISESMAAC 808
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 100 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 159
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 160 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 218
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 219 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 275
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 276 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 335
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 336 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 395
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 396 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 452
>gi|193783835|dbj|BAG53817.1| unnamed protein product [Homo sapiens]
Length = 863
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 125 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 184
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 185 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 242
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 243 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 296
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 297 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 356
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 357 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 416
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 417 LASGRIILILEGGYNLTSISESMAAC 442
>gi|46623327|gb|AAH69243.1| HDAC6 protein [Homo sapiens]
Length = 1215
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 477 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 536
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 537 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 595 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 648
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 649 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 708
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 768
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 769 LASGRIILILEGGYNLTSISESMAAC 794
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 438
>gi|13128864|ref|NP_006035.2| histone deacetylase 6 [Homo sapiens]
gi|205371758|sp|Q9UBN7.2|HDAC6_HUMAN RecName: Full=Histone deacetylase 6; Short=HD6
gi|119571131|gb|EAW50746.1| histone deacetylase 6, isoform CRA_c [Homo sapiens]
gi|119571132|gb|EAW50747.1| histone deacetylase 6, isoform CRA_c [Homo sapiens]
gi|168278749|dbj|BAG11254.1| histone deacetylase 6 [synthetic construct]
Length = 1215
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 477 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 536
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 537 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 595 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 648
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 649 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 708
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 768
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 769 LASGRIILILEGGYNLTSISESMAAC 794
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 438
>gi|410898956|ref|XP_003962963.1| PREDICTED: histone deacetylase 6-like [Takifugu rubripes]
Length = 1135
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/391 (40%), Positives = 233/391 (59%), Gaps = 4/391 (1%)
Query: 5 SGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE 64
S ++ GL+YDERM +H +HPE P RI I+++ Q G+ RC + A+
Sbjct: 493 SSHAPSVATATGLVYDERMMEHLNLWDRHHPEQPQRISKIFSQHQELGLVDRCRSIPARL 552
Query: 65 AKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV 124
A ++ L H+ HV+ ++ ++ + ++ + NSIY+N S +AA LAAG
Sbjct: 553 ATEEELCMCHSVQHVHQMRATATMK-PRELHKLGDEFNSIYINNQSFQAALLAAGGCFSG 611
Query: 125 AERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVD 184
E++ G++ + AIVRPPGHHAE D GFC +N A+AA + ++ +LI+D
Sbjct: 612 VEQILAGQVRNGVAIVRPPGHHAERDFPCGFCFFNTAALAARHAQKLSQDAPLH-VLILD 670
Query: 185 WDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN 244
WDVHHGN TQ MF D VL+ S+HR++ G F+P+++D +G G+GYN+NV W
Sbjct: 671 WDVHHGNGTQHMFEDDDSVLYISLHRYDNGAFFPSSEDAAPDRVGVAKGVGYNVNVAWSR 730
Query: 245 GRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM 304
GR GD+DYLA + H+++PVA +F PD++++SAGFDAA GDPLGG VTP GY+ + +LM
Sbjct: 731 GRMGDSDYLAAFHHVVMPVATEFNPDLVLVSAGFDAARGDPLGGYHVTPEGYAHLTHQLM 790
Query: 305 DFAQGKIVLALEGGYNLGSISNSVLACMNVLLED-KPVAGSSEAYPFESTWRVIQAVRKK 363
A G+++L LEGGYNL SIS S+ C +VLL D P + P S I V +
Sbjct: 791 SLAGGRLLLILEGGYNLSSISKSMAMCTSVLLGDPPPALLTPLPPPHHSAVATINEVIRC 850
Query: 364 LSAFWPTLADELPTKL-TSLKAPPAHMISSS 393
+ +W +L +P + SL +P H SS
Sbjct: 851 HAPYWRSLRIHIPESVRASLPSPKDHGKRSS 881
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 185/310 (59%), Gaps = 4/310 (1%)
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSV 121
A+ + K LL H++++V+L+K+ + + ++ K +SIYL+ S A +A GSV
Sbjct: 116 AQRSYRKELLLCHSQHYVDLMKSTQTMT-EEELHSLSDKYDSIYLHPESFSVAVMAVGSV 174
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+++ ++V EL + FA+VRPPGHHA+ D GF ++NNVA+AA + ++++L
Sbjct: 175 LQLVDQVMTSELRNGFAVVRPPGHHAQKDLPNGFSIFNNVAIAARYAQTRH---SVSRVL 231
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVDWDVHHG Q +F +DP VL+FSVHR E G+F+P + +G G NIN+P
Sbjct: 232 IVDWDVHHGQGIQYLFQEDPSVLYFSVHRFEQGSFWPHLPESDSHFVGSSGAEGSNINLP 291
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLK 301
W DADY+A + +LLPVA +F P ++++ AGFDAAAGD G V P + ++
Sbjct: 292 WNKTGMKDADYIAAFQQLLLPVAHEFQPQLVLVCAGFDAAAGDEKGQMCVRPQCFHILTH 351
Query: 302 KLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVR 361
LM A+G++VLALEGGYNL S + AC+ LL ++ P +S R I
Sbjct: 352 MLMSLAEGRLVLALEGGYNLQSTAEGTAACVRALLGGACPPLATPTAPSDSALRSISQTL 411
Query: 362 KKLSAFWPTL 371
L +WP+L
Sbjct: 412 SALFPYWPSL 421
>gi|119571129|gb|EAW50744.1| histone deacetylase 6, isoform CRA_a [Homo sapiens]
Length = 1261
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 523 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 582
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 583 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 640
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 641 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 694
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 695 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 754
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 755 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 814
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 815 LASGRIILILEGGYNLTSISESMAAC 840
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 207/363 (57%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 132 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 191
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 192 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 250
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 251 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 307
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 308 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 367
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 368 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 427
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 428 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRS 487
Query: 375 LPT 377
T
Sbjct: 488 TET 490
>gi|4754911|gb|AAD29048.1|AF132609_1 histone deacetylase 6 [Homo sapiens]
gi|3776071|emb|CAA09893.1| histone deacetylase-like protein [Homo sapiens]
Length = 1215
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 477 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 536
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 537 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 595 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 648
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 649 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 708
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 768
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 769 LASGRIILILEGGYNLTSISESMAAC 794
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 438
>gi|254568172|ref|XP_002491196.1| Putative catalytic subunit of a class II histone deacetylase
complex [Komagataella pastoris GS115]
gi|238030993|emb|CAY68916.1| Putative catalytic subunit of a class II histone deacetylase
complex [Komagataella pastoris GS115]
gi|328352281|emb|CCA38680.1| histone deacetylase 6/10 [Komagataella pastoris CBS 7435]
Length = 741
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/384 (42%), Positives = 220/384 (57%), Gaps = 27/384 (7%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG---------- 52
R I + GL YD RM H Y HPE+P RI I+ L G
Sbjct: 64 RYITLKTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLITDPTLSGI 123
Query: 53 --IPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI---ASKLNSIYLN 107
I + + +EA + +L VH+E H+ I++ SS R+R+ K +S+Y N
Sbjct: 124 DQIGDYMLKIPVREATAEEILLVHSEEHLKFIESTSSMS----RERLLEETEKGDSVYFN 179
Query: 108 EGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASF 167
S +A L+ G IE + V EG + +A A+VRPPGHHAEPD GFCL++NVAVAA
Sbjct: 180 HDSLLSAKLSCGGAIEACKAVVEGRVKNALAVVRPPGHHAEPDSPGGFCLFSNVAVAAKN 239
Query: 168 LLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTM 227
+L PE + KI+++DWDVHHGN TQK FW+DPRVL+ S+HR+E G +YP G
Sbjct: 240 ILRNYPE-SVRKIVVLDWDVHHGNGTQKAFWEDPRVLYISLHRYEQGKYYPGTKAGGADQ 298
Query: 228 IGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLG 287
GE GLG NIN+PW G DADYL + +++PV +++ PD++IIS+GFDAA GD +G
Sbjct: 299 CGENEGLGKNINIPWPVGGMNDADYLYAFRKVVMPVCREYAPDLLIISSGFDAAEGDIIG 358
Query: 288 GCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEA 347
GC ++P GYS M L A+G + + LEGGYNL SI+NS L+ VLL + P
Sbjct: 359 GCHISPAGYSQMTHMLKSLARGNVCVVLEGGYNLDSIANSALSVTKVLLGESP-EEPKVT 417
Query: 348 YPFESTWRVIQAVRKKLSAFWPTL 371
P VI V K S +W TL
Sbjct: 418 VPSAHAIEVIDDVIKIQSQYWKTL 441
>gi|194381040|dbj|BAG64088.1| unnamed protein product [Homo sapiens]
Length = 1229
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 491 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 550
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 551 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 608
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 609 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 662
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 663 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 722
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 723 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 782
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 783 LASGRIILILEGGYNLTSISESMAAC 808
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 207/363 (57%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 100 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 159
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 160 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 218
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 219 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 275
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 276 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 335
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 336 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 395
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 396 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRS 455
Query: 375 LPT 377
T
Sbjct: 456 TET 458
>gi|40788979|dbj|BAA74924.2| KIAA0901 protein [Homo sapiens]
Length = 1233
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 495 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 554
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 555 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 612
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 613 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 666
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 667 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 726
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 727 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 786
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 787 LASGRIILILEGGYNLTSISESMAAC 812
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 207/363 (57%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 104 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 163
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 164 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 222
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 223 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 279
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 280 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 339
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 340 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 399
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 400 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRS 459
Query: 375 LPT 377
T
Sbjct: 460 TET 462
>gi|194381150|dbj|BAG64143.1| unnamed protein product [Homo sapiens]
Length = 1205
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 467 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 526
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 527 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 584
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 585 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 638
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 639 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 698
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 699 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 758
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 759 LASGRIILILEGGYNLTSISESMAAC 784
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 207/363 (57%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 76 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 135
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 136 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 194
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 195 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 251
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 252 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 311
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 312 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 371
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 372 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRS 431
Query: 375 LPT 377
T
Sbjct: 432 TET 434
>gi|52545634|emb|CAB70878.2| hypothetical protein [Homo sapiens]
Length = 1209
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 471 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 530
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 531 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 588
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 589 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 642
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 643 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 702
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 703 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 762
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 763 LASGRIILILEGGYNLTSISESMAAC 788
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 203/359 (56%), Gaps = 14/359 (3%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQF--DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+ + Q+ + +A +S+YL+ S A LA+GSV+ + + V E
Sbjct: 146 ---------RMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAE 196
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG
Sbjct: 197 IRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQG 253
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY
Sbjct: 254 TQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADY 313
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++
Sbjct: 314 IAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLI 373
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
L+LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 374 LSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQTSVSCALEALEPFWEVL 432
>gi|15489272|gb|AAH13737.1| HDAC6 protein [Homo sapiens]
gi|119571133|gb|EAW50748.1| histone deacetylase 6, isoform CRA_d [Homo sapiens]
gi|325463551|gb|ADZ15546.1| histone deacetylase 6 [synthetic construct]
Length = 1063
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 325 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 384
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 385 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 442
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 443 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 496
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 497 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 556
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 557 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 616
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 617 LASGRIILILEGGYNLTSISESMAAC 642
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 166/281 (59%), Gaps = 3/281 (1%)
Query: 97 IASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFC 156
+A +S+YL+ S A LA+GSV+ + + V E+ + AI+RPPGHHA+ G+C
Sbjct: 15 LADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYC 74
Query: 157 LYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF 216
++N+VAVAA + + I ++LIVDWDVHHG TQ F +DP VL+FS+HR+E G F
Sbjct: 75 MFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRF 131
Query: 217 YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISA 276
+P ++ G G G GY INVPW DADY+A + H+LLPVA +F P +++++A
Sbjct: 132 WPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAA 191
Query: 277 GFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
GFDA GDP G TP G++ + LM A GK++L+LEGGYNL +++ V A ++ LL
Sbjct: 192 GFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLL 251
Query: 337 EDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPT 377
D S P S + + L FW L T
Sbjct: 252 GDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRSTET 292
>gi|451995023|gb|EMD87492.1| hypothetical protein COCHEDRAFT_1145200 [Cochliobolus
heterostrophus C5]
Length = 847
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 224/375 (59%), Gaps = 19/375 (5%)
Query: 14 RVGLLYDERMCKH------NTPDGDYHPENPNRIKAIWNKLQAAGI----------PQRC 57
+ GL+YD RM H N D HPE+P RI +I+ +L+ AG+ C
Sbjct: 115 KTGLVYDPRMRFHAELPDMNINPDDIHPEDPRRIHSIFEELKQAGLVASSTSEEDKEDHC 174
Query: 58 VVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLA 117
+ A+ A +L +HTE H +L+++ + D + A +L+SIYLN + E A LA
Sbjct: 175 WRIAARFATRPEILLIHTEEHYDLVESFQNMTSDELKFE-AERLDSIYLNNSTYECAKLA 233
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
AG IE + V +G + +A AI+RPPGHHAE D+ GFC++NNV +AA + PE
Sbjct: 234 AGGAIEACKAVVQGAVRNAIAIIRPPGHHAESDQPSGFCIFNNVPIAARVCQDAYPET-C 292
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
K+LI+DWDVHHGN Q F+ DP VL+ S+H + GTFYP DG GEG G G N
Sbjct: 293 RKVLILDWDVHHGNGIQHAFYDDPNVLYISLHVFKDGTFYPNLPDGNLDYCGEGRGEGKN 352
Query: 238 INVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
+N+PW GD++YL + +++P+A +F PD++IISAGFDAA GD LGGC VTP Y
Sbjct: 353 VNIPWAEHGMGDSEYLYAFQQVVMPIATEFNPDLVIISAGFDAAEGDLLGGCFVTPACYG 412
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSE-AYPFESTWRV 356
M LM A+GK+V+ LEGGYNL SI+ S LA VL+ + P + P +S +
Sbjct: 413 HMTHMLMSLAKGKLVVCLEGGYNLRSIARSALAVTKVLMLEPPDRLRDDLPAPKDSAVYI 472
Query: 357 IQAVRKKLSAFWPTL 371
++ V+++ S +W +L
Sbjct: 473 VENVKRQHSKYWKSL 487
>gi|344233841|gb|EGV65711.1| hypothetical protein CANTEDRAFT_118275 [Candida tenuis ATCC 10573]
Length = 717
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/383 (42%), Positives = 225/383 (58%), Gaps = 21/383 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQR----------- 56
+ GL+YD RM H Y HPE+P RI I+ KL AG+
Sbjct: 17 KTGLVYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKKLAEAGLITDPSLSGTDDLGP 76
Query: 57 -CVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ + +EA D+ +L VH+E H+ I + + D + + +SIY+N S +A
Sbjct: 77 LMMKIPIREASDEEILLVHSEEHLKYIASTETMSRDKLLEETETG-DSIYVNNDSYLSAK 135
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G IE + V G++ ++ AIVRPPGHHAEPD GFCL++NVAVAA +L P+
Sbjct: 136 LSCGGSIEACKAVISGQVKNSMAIVRPPGHHAEPDTPGGFCLFSNVAVAAKTMLKLFPD- 194
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ KI+IVDWD+HHGN TQK F+ DPRVL+ S+HR+E G FYP G + M GE G G
Sbjct: 195 SVRKIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRYENGRFYPGTKAGSHKMCGEEEGEG 254
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N+N+PW GD DY+ ++ +++PV +F PD II+S+GFDAA GD +GGC VTP G
Sbjct: 255 FNMNIPWRAPGTGDGDYVYAFNKLVIPVISEFDPDFIIVSSGFDAADGDIVGGCHVTPAG 314
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
Y M L A+GK+ + LEGGYNL SIS S LA VLL + P + ++ +PF T
Sbjct: 315 YGYMTHMLKGIARGKLSVILEGGYNLDSISKSALAVAKVLLGEPPESTITQ-HPFLDTIE 373
Query: 356 VIQAVRKKLSAFWPTLADELPTK 378
V+ V K S +W L P++
Sbjct: 374 VVDEVIKTQSKYWTCLKPGNPSR 396
>gi|345489606|ref|XP_003426178.1| PREDICTED: histone deacetylase 6-like [Nasonia vitripennis]
Length = 1094
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 140/358 (39%), Positives = 223/358 (62%), Gaps = 4/358 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV ++YD+RM KH + HPE P RI +I++K + + +RC++L + A ++ +L
Sbjct: 493 RVCIVYDDRMLKHYNVVDESHPEKPGRITSIFSKHKDYNLLERCILLQGRAASEEEILLA 552
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT+++++ IK + + + AS LNS+YL+ + +A ++AGS+++V + + GE
Sbjct: 553 HTQDYLDNIKKTAETKLKDLAKQ-ASSLNSVYLHPETWTSAAISAGSLLQVVDSILNGES 611
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S AIVRPPGHHAE D A GFC++NNVA+AA + ++ + ++LIVDWD+HHGN T
Sbjct: 612 QSGVAIVRPPGHHAEEDAACGFCIFNNVAIAAKYAVSCH---NLKRVLIVDWDIHHGNGT 668
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q + D +L+ S+HR++ G+F+P + Y ++G G G G+N+N+PW GDA+Y+
Sbjct: 669 QSILENDSSILYISLHRYDNGSFFPHSKAANYNVVGTGKGEGFNVNIPWNKRGMGDAEYI 728
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + +++P+A + P+++++SAGFDA DPLGGC+V+P Y M L A G+I+L
Sbjct: 729 AAFQQVVMPIAYQYNPELVLVSAGFDACIADPLGGCKVSPEMYGHMTHWLSSLANGRIIL 788
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYN+ SIS+++ C LL D V + S I V + +WP L
Sbjct: 789 TLEGGYNVNSISHAMTMCTKALLGDPLVPLDAHQVACPSAVASINNVLQTHKQYWPNL 846
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 164/328 (50%), Gaps = 54/328 (16%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
I++ GL+YDE M +H + +PE P R ++ + + G+ +RC + + A+ L
Sbjct: 114 IRKDTGLVYDESMAEHRCLWDENYPECPERFTRVFQRCKELGLVERCKYITPRSAEYSEL 173
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L HT H+ ++K+ + + + ++SK ++IY + + + + LA GS I + E + +
Sbjct: 174 LLKHTPAHIEILKSTEGCNNEKKLEDLSSKYDAIYFHPSTYQLSLLATGSTINLVENICK 233
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
+ + AI+RPPGHHA E G+C +NNVA++A L +ILIVDWDVHHG
Sbjct: 234 ENIQNGMAIIRPPGHHAMKAEYCGYCFFNNVAISAEVALKNN---LAKRILIVDWDVHHG 290
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
+TQ+MF+ DPRV++FS+HR+E G F+P + Y IG+GPG
Sbjct: 291 QATQQMFYNDPRVVYFSIHRYENGEFWPNLRESNYHYIGDGPG----------------- 333
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
+G +TP Y+ +L L+ A GK
Sbjct: 334 ----------------------------------EVGLMNITPACYTHLLSSLLGLAAGK 359
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLED 338
+ + LEGGY L S++ S + LL D
Sbjct: 360 VAVVLEGGYCLKSLAESAALTLRTLLGD 387
>gi|428167512|gb|EKX36470.1| hypothetical protein GUITHDRAFT_59248, partial [Guillardia theta
CCMP2712]
Length = 301
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 153/304 (50%), Positives = 194/304 (63%), Gaps = 5/304 (1%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
HPE P R+ I+ +L G+ QR ++ A+ A+ + L SVH +V+ I ++ +Q
Sbjct: 1 HPEQPLRLSYIYAELAQHGLLQRMELVRARLARPEELSSVHAAGYVHTICSLPEEQ--KE 58
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
D IASK+NS+YL S E A LAAGSV+E VA L A VRPPGHHA P AM
Sbjct: 59 LDDIASKMNSVYLCPQSRECALLAAGSVVEATRMVASNALGRALCAVRPPGHHALPACAM 118
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFC++ NVAVAA + +ILI DWDVHHGN TQKMF +D VLFFSVHRH+
Sbjct: 119 GFCIFGNVAVAAR---EAKLRQWAKRILIFDWDVHHGNGTQKMFLEDSSVLFFSVHRHDR 175
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
G+FYP DG + G G G+ +NV W GDA+YLAV D +LLP+ ++F PD+++
Sbjct: 176 GSFYPGGPDGSSSSCGTREGQGFTVNVAWPKPGAGDAEYLAVLDQLLLPIGREFRPDLVL 235
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMN 333
ISAGFDAA GDPLGGC+VTP Y M + M A GK+VL LEGGY+L + S SV AC
Sbjct: 236 ISAGFDAAQGDPLGGCQVTPSCYYKMTQACMQLAGGKVVLVLEGGYSLRATSQSVAACTC 295
Query: 334 VLLE 337
LL+
Sbjct: 296 ALLQ 299
>gi|7108921|gb|AAF36540.1| GR AF-1 specific histone deacetylase [Homo sapiens]
Length = 1066
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 206/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 328 LTSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 387
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 388 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 445
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 446 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVDW 499
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 500 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 559
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 560 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 619
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 620 LASGRIILILEGGYNLTSISESMAAC 645
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 165/275 (60%), Gaps = 3/275 (1%)
Query: 97 IASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFC 156
+A +S+YL+ S A LA+GSV+ + + V E+ + AI+RPPGHHA+ G+C
Sbjct: 18 LADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYC 77
Query: 157 LYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF 216
++N+VAVAA + + I ++LI+DWDVHHG TQ F +DP VL+FS+HR+E G F
Sbjct: 78 MFNHVAVAARYAQQKHR---IRRVLILDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRF 134
Query: 217 YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISA 276
+P ++ G G G GY INVPW DADY+A + H+LLPVA +F P +++++A
Sbjct: 135 WPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAA 194
Query: 277 GFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
GFDA GDP G TP G++ + LM A GK++L+LEGGYNL +++ V A ++ LL
Sbjct: 195 GFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLL 254
Query: 337 EDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
D S P S + + L FW L
Sbjct: 255 GDPGPMLESPGAPCRSAQASVSCALEALEPFWEVL 289
>gi|347963988|ref|XP_310554.5| AGAP000532-PA [Anopheles gambiae str. PEST]
gi|333466940|gb|EAA06256.6| AGAP000532-PA [Anopheles gambiae str. PEST]
Length = 1118
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 226/392 (57%), Gaps = 16/392 (4%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQA-AGIPQRCVVLNAKEAKDKNLLS 72
RV +YDE M +H +HPE P RI I +L + QR L + A + L
Sbjct: 535 RVCYVYDELMLEHRNSAEKWHPEQPERIAKIMQRLTGDYQLAQRMKRLPGRLATTEELCL 594
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH HV LI + S + A + NSIY + + +A +A GSV+ V E V EG
Sbjct: 595 VHGPEHVRLIGEVCQS---STMKQTADQYNSIYFHPSTDASARMATGSVLTVVEDVLEGR 651
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
S +VRPPGHHAE D GFC+YN++AVAA + G+ ++LIVDWDVHHGN
Sbjct: 652 TRSGVCVVRPPGHHAEADTPHGFCIYNSIAVAARHAVKR---YGLRRVLIVDWDVHHGNG 708
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F +DP VL+ SVHR++ G F+P + D YT++G GPG G+N+N+PW GD +Y
Sbjct: 709 TQHIFEQDPHVLYVSVHRYDNGAFFPRSTDADYTVVGSGPGRGFNVNIPWNRKGMGDPEY 768
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + ++LP+A ++ P+++++SAGFDAA GDPLGGCRVTP Y + L A G++V
Sbjct: 769 VAAFHSVILPIAYEYEPELVLVSAGFDAAIGDPLGGCRVTPEAYGHFTQWLSVLAGGRLV 828
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDK-----PVAGSSEAYP--FESTWRVIQAVRKKLS 365
L LEGGYN+ SIS+++ C LL D PV+G++ P S + V
Sbjct: 829 LCLEGGYNVNSISHAMAMCAKALLGDPLPMLLPVSGTARTPPATHASCCETLSNVLSVQR 888
Query: 366 AFWPTLA--DELPTKLTSLKAPPAHMISSSDS 395
+W +L +LP+ L+ + +I + D+
Sbjct: 889 LYWRSLCFNKKLPSSEPLLEETGSELIEALDN 920
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 147/366 (40%), Positives = 205/366 (56%), Gaps = 7/366 (1%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKD 67
RT++ G+LYDER H +PE P R + + + RC + + A
Sbjct: 100 ARTVRGPTGILYDERFALHRCLWDTNYPECPERYLRVMERFTIGQLVDRCQFVAPRPATR 159
Query: 68 KNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAER 127
LL+ HT + L+ Q + +R++S ++I+++ S E + LA GS I++ E
Sbjct: 160 AELLTKHTAEQIELLAQTHGSQDEPELERLSSHYDAIFIHPTSYETSVLAVGSTIQLVES 219
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
V G + + AI+RPPGHHA E G+C +NNVA+AA L+ LG KILIVDWDV
Sbjct: 220 VWSGTVQNGMAILRPPGHHAMTAEYNGYCFFNNVAIAAQHALDH---LGTQKILIVDWDV 276
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG TQ+MF+ DPRVL+FS+HR+E GTF+P + + +G G G GYN NVP
Sbjct: 277 HHGQGTQRMFYSDPRVLYFSIHRYEHGTFWPNLRESDFDYVGTGKGEGYNFNVPLNKTGM 336
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
+ DYLA+W +LLPVA +F P++II+SAG+DAA G P GC TP YS +L L+ A
Sbjct: 337 TNGDYLAIWQQLLLPVATEFQPELIIVSAGYDAAYGCP-EGCMETPAFYSHLLSPLLLMA 395
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY--PFESTWRVIQAVRKKLS 365
QG++ + LEGGY L S++ + LL D P +EA P ES I
Sbjct: 396 QGRVAVVLEGGYCLESLAEGCALTLKTLLGD-PAPRLAEALQPPSESMQASILNCIYSHR 454
Query: 366 AFWPTL 371
+W L
Sbjct: 455 KYWKCL 460
>gi|353240903|emb|CCA72749.1| related to HDA1-histone deacetylase A [Piriformospora indica DSM
11827]
Length = 698
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/329 (46%), Positives = 205/329 (62%), Gaps = 8/329 (2%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
++ G +Y+ M H P D HPE P RI I+ ++QA G+ R + + L
Sbjct: 49 KKTGYIYESAMLAHVHPTED-HPEQPARILVIFQEMQAEGLITRARSIPFNPVLRREALL 107
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VH+E+H N ++ I+ ++ + +A S+Y++ ++ AA L+ G VIE VA G
Sbjct: 108 VHSEDHWNKVEQIAQMTRENILESVAYYEGLSLYVSPATTHAAKLSCGGVIEACRAVASG 167
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+ + FAIVRPPGHHAEPDE MGFC +NN AVAA + ER K+LI+DWDVHHGN
Sbjct: 168 TIRNCFAIVRPPGHHAEPDEHMGFCFFNNCAVAARAMQVERKA---KKVLILDWDVHHGN 224
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQK F DP VL+ S+HR + YP G T GEGPGLGY++N+ W G GDAD
Sbjct: 225 GTQKAFLDDPTVLYISLHRFDI---YPGGQFGAVTSCGEGPGLGYSVNIAWPGGGMGDAD 281
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YL + +++P+A +F PD++I+SAGFDAA GD LG C VTP GY+ M L A GK+
Sbjct: 282 YLYAFQKVVMPIAVEFAPDLVIVSAGFDAARGDDLGECDVTPAGYAHMTHMLSSLANGKL 341
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKP 340
V+ALEGGYNL SI NS +A M VL+ + P
Sbjct: 342 VVALEGGYNLDSIRNSAVAVMRVLMGEAP 370
>gi|347963990|ref|XP_003437019.1| AGAP000532-PB [Anopheles gambiae str. PEST]
gi|333466941|gb|EGK96427.1| AGAP000532-PB [Anopheles gambiae str. PEST]
Length = 1118
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 226/392 (57%), Gaps = 16/392 (4%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQA-AGIPQRCVVLNAKEAKDKNLLS 72
RV +YDE M +H +HPE P RI I +L + QR L + A + L
Sbjct: 535 RVCYVYDELMLEHRNSAEKWHPEQPERIAKIMQRLTGDYQLAQRMKRLPGRLATTEELCL 594
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH HV LI + S + A + NSIY + + +A +A GSV+ V E V EG
Sbjct: 595 VHGPEHVRLIGEVCQS---STMKQTADQYNSIYFHPSTDASARMATGSVLTVVEDVLEGR 651
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
S +VRPPGHHAE D GFC+YN++AVAA + G+ ++LIVDWDVHHGN
Sbjct: 652 TRSGVCVVRPPGHHAEADTPHGFCIYNSIAVAARHAVKR---YGLRRVLIVDWDVHHGNG 708
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F +DP VL+ SVHR++ G F+P + D YT++G GPG G+N+N+PW GD +Y
Sbjct: 709 TQHIFEQDPHVLYVSVHRYDNGAFFPRSTDADYTVVGSGPGRGFNVNIPWNRKGMGDPEY 768
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + ++LP+A ++ P+++++SAGFDAA GDPLGGCRVTP Y + L A G++V
Sbjct: 769 VAAFHSVILPIAYEYEPELVLVSAGFDAAIGDPLGGCRVTPEAYGHFTQWLSVLAGGRLV 828
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDK-----PVAGSSEAYP--FESTWRVIQAVRKKLS 365
L LEGGYN+ SIS+++ C LL D PV+G++ P S + V
Sbjct: 829 LCLEGGYNVNSISHAMAMCAKALLGDPLPMLLPVSGTARTPPATHASCCETLSNVLSVQR 888
Query: 366 AFWPTLA--DELPTKLTSLKAPPAHMISSSDS 395
+W +L +LP+ L+ + +I + D+
Sbjct: 889 LYWRSLCFNKKLPSSEPLLEETGSELIEALDN 920
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 146/366 (39%), Positives = 205/366 (56%), Gaps = 7/366 (1%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKD 67
RT++ G+LYDER H +PE P R + + + RC + + A
Sbjct: 100 ARTVRGPTGILYDERFALHRCLWDTNYPECPERYLRVMERFTIGQLVDRCQFVAPRPATR 159
Query: 68 KNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAER 127
LL+ HT + L+ Q + +R++S ++I+++ S E + LA GS I++ E
Sbjct: 160 AELLTKHTAEQIELLAQTHGSQDEPELERLSSHYDAIFIHPTSYETSVLAVGSTIQLVES 219
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
V G + + AI+RPPGHHA E G+C +NNVA+AA L+ LG KILIVDWDV
Sbjct: 220 VWSGTVQNGMAILRPPGHHAMTAEYNGYCFFNNVAIAAQHALDH---LGTQKILIVDWDV 276
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHG TQ+MF+ DPRVL+FS+HR+E GTF+P + + +G G G GYN NVP
Sbjct: 277 HHGQGTQRMFYSDPRVLYFSIHRYEHGTFWPNLRESDFDYVGTGKGEGYNFNVPLNKTGM 336
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
+ DYLA+W +LLPVA +F P++II+SAG+D+A GD GC TP YS +L L+ A
Sbjct: 337 TNGDYLAIWQQLLLPVATEFAPELIIVSAGYDSALGDE-KGCMETPAFYSHLLSPLLLMA 395
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY--PFESTWRVIQAVRKKLS 365
QG++ + LEGGY L S++ + LL D P +EA P ES I
Sbjct: 396 QGRVAVVLEGGYCLESLAEGCALTLKTLLGD-PAPRLAEALQPPSESMQASILNCIYSHR 454
Query: 366 AFWPTL 371
+W L
Sbjct: 455 KYWKCL 460
>gi|294656174|ref|XP_458424.2| DEHA2C16918p [Debaryomyces hansenii CBS767]
gi|199430917|emb|CAG86506.2| DEHA2C16918p [Debaryomyces hansenii CBS767]
Length = 810
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 222/385 (57%), Gaps = 27/385 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRC---------- 57
+ GL+YD RM H Y HPE+P RI I+ KL AG+ Q
Sbjct: 90 KTGLVYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKKLAEAGLIQDSSLSGIDEIGP 149
Query: 58 --VVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI---ASKLNSIYLNEGSSE 112
V + +EA + +L VH+E H+ I++ + R+R+ + +SIY+N S
Sbjct: 150 LMVKIPIREASAEEILEVHSEEHLRFIESTETMS----RERLLEETERGDSIYVNNDSYL 205
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + ++ A+VRPPGHHAEPD GFCL++NVAVAA +L
Sbjct: 206 SAKLSCGGTIEACKAVIEGRVKNSLAVVRPPGHHAEPDTPGGFCLFSNVAVAAKNILKRY 265
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + +I+IVDWD+HHGN TQK F+ DPRVL+ S+HR+E G FYP G T GEG
Sbjct: 266 PE-SVRRIVIVDWDIHHGNGTQKAFYDDPRVLYISLHRYENGKFYPGTKYGNSTQTGEGA 324
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G GY++N+PW D DY ++ +++PV +F PD++I+S+GFDAA GD +GGC V+
Sbjct: 325 GEGYSLNIPWRTPGMDDGDYFYAFNKVVIPVITEFDPDLVIVSSGFDAADGDIIGGCHVS 384
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL SIS S L VL+ + P + + P
Sbjct: 385 PTGYGHMTHLLKGIAKGKLCVVLEGGYNLDSISKSALGVAKVLVGEPP-ENTIRSQPHIE 443
Query: 353 TWRVIQAVRKKLSAFWPTLADELPT 377
T VI V K S +W L PT
Sbjct: 444 TLEVIDEVIKIQSKYWNCLKPGNPT 468
>gi|344304180|gb|EGW34429.1| histone deacetylase HDA1 [Spathaspora passalidarum NRRL Y-27907]
Length = 891
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 160/382 (41%), Positives = 221/382 (57%), Gaps = 21/382 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL+YD RM H Y HPE+P RI I+ KL AG+ Q +
Sbjct: 200 KTGLVYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKKLAEAGLIQDSSLSGVNDIGP 259
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ +EA + +L VH+E+H+ I++ + D + K +SIY+N S +A
Sbjct: 260 LMLKIPIREATAEEILEVHSESHLKFIESTETMTRDQLMEE-TEKGDSIYVNNDSYFSAR 318
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G IE + V EG + ++ A+VRPPGHHAEPD GFCL++NVAVAA LL PE
Sbjct: 319 LSCGGTIEACKAVIEGRVKNSLAVVRPPGHHAEPDSPGGFCLFSNVAVAAKNLLKTYPE- 377
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ KI+I+DWD+HHGN TQK F+ DPRVL+ S+HR+E G FYP G +GE G G
Sbjct: 378 SVRKIVIIDWDIHHGNGTQKSFYNDPRVLYISMHRYENGRFYPGTKYGNSDQVGEEEGEG 437
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+NIN+PW + D DY+ ++ ++LP +F PD+II+S+GFDAA GD +GGC VTP G
Sbjct: 438 FNINIPWRSSGMHDGDYVYAFNKVILPTIIEFDPDLIIVSSGFDAADGDIIGGCHVTPAG 497
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
Y M L A+GK+ + LEGGYNL SIS S LA VL+ + P + P
Sbjct: 498 YGYMTHMLKGIAKGKLAVILEGGYNLDSISKSALAVAKVLVGEPP-ENTISMQPHLDAVE 556
Query: 356 VIQAVRKKLSAFWPTLADELPT 377
V+ V K + +W L +P+
Sbjct: 557 VVDEVIKIQAKYWKCLRHGIPS 578
>gi|396458606|ref|XP_003833916.1| hypothetical protein LEMA_P066770.1 [Leptosphaeria maculans JN3]
gi|312210464|emb|CBX90551.1| hypothetical protein LEMA_P066770.1 [Leptosphaeria maculans JN3]
Length = 857
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 159/377 (42%), Positives = 225/377 (59%), Gaps = 22/377 (5%)
Query: 14 RVGLLYDERMCKH-NTPDG-----DYHPENPNRIKAIWNKLQAAGI-----------PQR 56
R GL+YD RM H PD D HPE+P RI +I+ +++ AG+ +
Sbjct: 130 RTGLVYDPRMRFHAELPDSSHGADDIHPEDPRRIHSIFEEIKQAGLVDAVNEEGDAREDQ 189
Query: 57 CVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI-ASKLNSIYLNEGSSEAAY 115
C + + A +L +HTE H ++++ + D+ + ++ A +L+SIY N + + A
Sbjct: 190 CWRIGIRPATKPEILLIHTEEHYAFVESL--QYMDASQLKLEAERLDSIYFNRSTYDCAR 247
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
LAAG IE + V EG + +A AI+RPPGHHAE D+ GFC++NNV +A + P+
Sbjct: 248 LAAGGAIEACKAVVEGSVRNAIAIIRPPGHHAESDQPSGFCIFNNVPIAIRVCQDAYPQT 307
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
K+LI+DWDVHHGN Q F+ DP VL+ S+H + G FYP DG G+GPG G
Sbjct: 308 -CRKVLILDWDVHHGNGVQHAFYNDPNVLYISLHVYRNGHFYPNLPDGNLDYCGDGPGEG 366
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
N+N+PW GDA+YL + I++P+A +F PD++IISAGFDAA GD LGGC VTP
Sbjct: 367 KNVNIPWAEHGMGDAEYLYAFQEIVMPIATEFDPDLVIISAGFDAAEGDLLGGCFVTPAC 426
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSE-AYPFESTW 354
Y M LM A+GK+V+ LEGGYNL SI+ S LA VL+ + P + A P +S
Sbjct: 427 YGHMTHMLMRLAKGKLVVCLEGGYNLRSIARSALAVTRVLMLEPPDRLREDLAAPKDSAV 486
Query: 355 RVIQAVRKKLSAFWPTL 371
IQ V+++ S +W +L
Sbjct: 487 YTIQQVKRQHSRYWKSL 503
>gi|149246145|ref|XP_001527542.1| histone deacetylase HDA1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146447496|gb|EDK41884.1| histone deacetylase HDA1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 906
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/377 (42%), Positives = 220/377 (58%), Gaps = 21/377 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL+YD RM H Y HPE+P RI I+ +L AG+ Q +
Sbjct: 201 KTGLVYDVRMRYHAKIFTSYFEYTDPHPEDPRRIYRIYKRLAEAGLVQDPSLSGIDELGP 260
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ +EA + +L VH+E H+ I++ + D A+ +SIY+N S +A
Sbjct: 261 FIEKIPIREATIEEILEVHSEKHLEHIQSTETMTKDELLRETATG-DSIYVNNDSYFSAK 319
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G IE + V EG + ++ A VRPPGHHAEPD+ GFCL++NVAVAA +L PE
Sbjct: 320 LSCGGTIEACKAVIEGRVKNSLAAVRPPGHHAEPDDPGGFCLFSNVAVAAKNILKSYPE- 378
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +I+I+DWD+HHGN TQK F+ DPRVL+ S+HR+E G FYP G +GEG G G
Sbjct: 379 SVRRIVILDWDIHHGNGTQKSFYDDPRVLYISLHRYENGKFYPGTKYGGADQVGEGAGKG 438
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
YNIN+PW D DY+ ++ +++P +F PD+II+S+GFDAA GD +GGC V+P G
Sbjct: 439 YNINIPWRTAGMRDGDYVYAFNKVVIPTILEFDPDLIIVSSGFDAADGDVIGGCHVSPAG 498
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
Y M L A+GK+ + LEGGYNL SIS S LA VL+ + P + + P T
Sbjct: 499 YGYMTHMLKGIAKGKLAVILEGGYNLDSISESALAVAKVLIGEPP-ENTVKQQPHPDTIE 557
Query: 356 VIQAVRKKLSAFWPTLA 372
VI V K S FW L+
Sbjct: 558 VIDEVIKIQSRFWECLS 574
>gi|348553640|ref|XP_003462634.1| PREDICTED: histone deacetylase 6-like [Cavia porcellus]
Length = 1159
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/327 (44%), Positives = 206/327 (62%), Gaps = 13/327 (3%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+ R GL+YD+RM H +HPE P RI I L+ G+ RCV L + A + LL
Sbjct: 477 QARTGLVYDQRMMNHCNVWDSHHPETPQRILRIMRHLEELGLAGRCVTLPVRPATEAELL 536
Query: 72 SVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
+ H+ +V ++ ++++ +R R + +SIY+ + A LA G+V + E V
Sbjct: 537 TCHSAEYVERLR--ATEKMKTRELHREGANFDSIYICPSTFTCAQLATGAVCCLVEAVLS 594
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDWD 186
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDWD
Sbjct: 595 GEVLNGVAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGRTMRILIVDWD 648
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
+HHGN TQ +F DP VL+ S+HR + GTF+P D+G + +G G G+ +NV W R
Sbjct: 649 IHHGNGTQHIFEDDPSVLYVSLHRFDRGTFFPMGDEGASSQVGRAAGTGFTVNVAWNGPR 708
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
GDA+YLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 VGDAEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGL 768
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMN 333
A G+I+L LEGGYNL SIS S+ AC +
Sbjct: 769 ANGRIILVLEGGYNLTSISESMAACTH 795
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 207/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL++DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLMQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ ++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEFIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AIVRPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKH---RIQRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNEVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL S++ V A +++LL D S P S I + L FW L
Sbjct: 382 LEGGYNLHSLAEGVSASLHILLGDPCPMLESPGAPCPSAQASISCTLEALEPFWQIL 438
>gi|403297488|ref|XP_003939594.1| PREDICTED: histone deacetylase 6 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403297490|ref|XP_003939595.1| PREDICTED: histone deacetylase 6 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403297492|ref|XP_003939596.1| PREDICTED: histone deacetylase 6 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1213
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/473 (36%), Positives = 256/473 (54%), Gaps = 48/473 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 477 LQFRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLPPRPATEAEL 536
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+ H+ ++ ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 537 FTCHSAEYIARLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 594
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 595 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 648
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 649 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 708
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM
Sbjct: 709 RIGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG 768
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMN-------------VLLEDKPVAGSSEAYPFES 352
A G+I+L LEGGYNL SIS S+ AC +A +E
Sbjct: 769 LASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHR 828
Query: 353 T-WRVIQAV---------------RKKLSAFWPTLADELPTKLTS-LKAPPAHMISSSDS 395
WR ++ + +K PTLA+++ T+ L+A IS S
Sbjct: 829 RYWRSLRVMKVEDKEGPSSSKLITKKAPQPAKPTLAEQMLTREKKVLEASMGKAISLSRE 888
Query: 396 EDEDTKVETLEAVLQVALSKLKVDDGHAELGMATPWRSELSKVDVFYASFGSN 448
E ++++ AV+ V + A +G ATP ++ +SK + A G
Sbjct: 889 ESTADQIKSETAVVAVTQDQ----SSEAAMGGATPAQT-ISKAAIGGAMLGQT 936
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ + R +A +S+YL+ S A LA GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMKEGELR-VLADTYDSVYLHPNSYSCACLATGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 438
>gi|393244978|gb|EJD52489.1| hypothetical protein AURDEDRAFT_82103 [Auricularia delicata
TFB-10046 SS5]
Length = 684
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/364 (43%), Positives = 222/364 (60%), Gaps = 15/364 (4%)
Query: 16 GLLYDERMCKHN---TPDGDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLL 71
G +YD M +H PD + +PE P RI I + L+ GI P+R V ++ + A +L
Sbjct: 35 GYVYDPTMMQHKEIWRPDNNPNPEIPERILKIHDMLREGGILPRRMVQIHGRLATRSEVL 94
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAE 130
VH+E+ + + I D + I + S+Y++E +++ A L+ G IE A VA
Sbjct: 95 LVHSEDLWDRVDAIQHMDTDMIMNSITYYDHLSLYVSEATTKCALLSCGGTIEAALAVAT 154
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + +AFAIVRPPGHHAEP+E MGFC +NNVAVA + + E +ILI+DWDVHHG
Sbjct: 155 GRVRNAFAIVRPPGHHAEPEEHMGFCFFNNVAVATRVV---QEETNCKRILILDWDVHHG 211
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ+ FW DP VL+ S+HR++ G FYP+ G M+GEGPG GY +N+PW GDA
Sbjct: 212 NGTQRAFWDDPSVLYISLHRYDGGKFYPSGPFGSMEMVGEGPGRGYCVNIPWPEAGMGDA 271
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
+YL + +++P+A +F PD+++ISAGFDAA GDPLGGC V+P GY+ M L A GK
Sbjct: 272 EYLYAFQQLVMPIAYEFAPDMVMISAGFDAADGDPLGGCLVSPAGYAHMTHMLSGLAGGK 331
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPF---ESTWRVIQAVRKKLSAF 367
+ +ALEGGY I++S LA VL+ D P + P E++ + I LS F
Sbjct: 332 LCVALEGGYETKVIADSALAVARVLVGDAP----PQLGPLVANETSTQAIWQCSLVLSRF 387
Query: 368 WPTL 371
W ++
Sbjct: 388 WKSI 391
>gi|241958122|ref|XP_002421780.1| histone deacetylase, putative [Candida dubliniensis CD36]
gi|223645125|emb|CAX39722.1| histone deacetylase, putative [Candida dubliniensis CD36]
Length = 869
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/387 (42%), Positives = 223/387 (57%), Gaps = 27/387 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGI---PQRCVV----- 59
+ GL+YD RM H Y HPE+P RI I+ KL AGI P +
Sbjct: 161 KTGLVYDVRMRYHAKVFTSYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGP 220
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL---NSIYLNEGSSE 112
+ +EA + +L VH+E+H+ I++ D RD++ + +SIY+N S
Sbjct: 221 FMLKIPIREATAEEILEVHSEDHLKFIQSTE----DMSRDQLLKETETGDSIYVNNDSYL 276
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + ++ AIVRPPGHHAEP+ GFCL++NVAVAA +L
Sbjct: 277 SAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKTY 336
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + KI+IVDWD+HHGN TQK F+ DPRVL+ S+HR E G FYP G +GEGP
Sbjct: 337 PE-SVRKIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGRFYPGTKYGDSNQVGEGP 395
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+ IN+PW + D DY+ ++ I+ PV +F PD+II+S+GFDAA GD +G C VT
Sbjct: 396 GEGFTINIPWRSYGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVT 455
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL SIS S LA VL+ + P + P
Sbjct: 456 PAGYGYMTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPP-ENTITLRPHLE 514
Query: 353 TWRVIQAVRKKLSAFWPTLADELPTKL 379
T V+ V K S ++ L + P +
Sbjct: 515 TIEVVDEVMKIQSKYFKCLREGFPNSI 541
>gi|194763445|ref|XP_001963843.1| GF21044 [Drosophila ananassae]
gi|190618768|gb|EDV34292.1| GF21044 [Drosophila ananassae]
Length = 1142
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/367 (40%), Positives = 223/367 (60%), Gaps = 14/367 (3%)
Query: 14 RVGLLYDERMCKH-NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
RV YD +M +H N DG HPE P RI++I + + +R L+A+ A +
Sbjct: 544 RVCYAYDTQMLQHCNLHDGG-HPEQPFRIQSIHQMHKEYALLERMKQLSARAATTDEICL 602
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
HT +HVN ++ + + + ++ S NS+YL+ + + A LAAGSV++ + V GE
Sbjct: 603 AHTRSHVNSVRRLLGRDPEELH-QLGSTYNSVYLHPRTFDCATLAAGSVLQAVDSVLRGE 661
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
S VRPPGHHAEPD+ GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN
Sbjct: 662 SRSGICNVRPPGHHAEPDQPHGFCIFNNVAIAAQYAIRD---YGLQRVLIVDWDVHHGNG 718
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F +P+VL+ SVHR+E G F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 719 TQHIFESNPKVLYVSVHRYEHGAFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEY 778
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VTP GY ++ L A GKIV
Sbjct: 779 ALAFQQVIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGMLTHWLSALAGGKIV 838
Query: 313 LALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKL 364
+ LEGGYN+ SIS ++ C LL D P G++ ++S +QA +
Sbjct: 839 VCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAASLQKPATVAYQSCIETLQACLEVQ 898
Query: 365 SAFWPTL 371
A W +L
Sbjct: 899 RAHWQSL 905
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 130/332 (39%), Positives = 195/332 (58%), Gaps = 7/332 (2%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++R L+YDE M +H H E P R + + + + RC+ L ++ A +
Sbjct: 107 VRRPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLADRCLQLPSRAATKAEV 166
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H + +K S + D R + ++S+ +SIY++ + E + LA GS IE+ +++
Sbjct: 167 LRLHTEEHFDRLKATSGIRDDDRMEELSSRYDSIYIHPSTFELSLLATGSTIELVDQLIA 226
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + AI+RPPGHHA E G+C +NNVA+AA L+ + +ILI+D+DVHHG
Sbjct: 227 GSAQNGMAIIRPPGHHAMKAEFNGYCFFNNVALAAQHALDVH---KLQRILIIDYDVHHG 283
Query: 191 NSTQKMFWKDPR----VLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
TQ+ F+ DPR VL+FS+HR E+G+F+P + Y IG GPG GY NVP +
Sbjct: 284 QGTQRFFYNDPRQVNTVLYFSIHRFEYGSFWPHLHESDYHAIGSGPGTGYTFNVPLNSTG 343
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
+ DYLA++ +LLPVA +F P++I++SAG+DAA G P G VTP Y +L L+
Sbjct: 344 MTNGDYLAIFQQLLLPVALEFQPELIMVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRL 403
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
A K+ + LEGGY L S++ + LL D
Sbjct: 404 ADSKVAVVLEGGYCLDSLAEGAALTLRSLLGD 435
>gi|390479765|ref|XP_002762913.2| PREDICTED: histone deacetylase 6 [Callithrix jacchus]
Length = 1303
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 206/326 (63%), Gaps = 13/326 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 568 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLPPRPATEAEL 627
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 628 FTCHSAEYVARLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 685
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 686 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 739
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 740 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 799
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+++P GY+ + LM
Sbjct: 800 RIGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQISPEGYAHLTHLLMG 859
Query: 306 FAQGKIVLALEGGYNLGSISNSVLAC 331
A G+I+L LEGGYNL SIS S+ AC
Sbjct: 860 LASGRIILILEGGYNLTSISESMAAC 885
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/275 (42%), Positives = 164/275 (59%), Gaps = 3/275 (1%)
Query: 97 IASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFC 156
+A +S+YL+ S A LA GSV+ + + V E+ + AI+RPPGHHA+ G+C
Sbjct: 258 LADTYDSVYLHPNSYSCACLATGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYC 317
Query: 157 LYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF 216
++N+VAVAA + + I ++LIVDWDVHHG TQ F +DP VL+FS+HR+E G F
Sbjct: 318 MFNHVAVAARYAQQKHR---IQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRF 374
Query: 217 YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISA 276
+P ++ IG G G GY INVPW DADY+A + H+LLPV +F P +++++A
Sbjct: 375 WPHLKASNWSTIGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVTLEFQPQLVVVAA 434
Query: 277 GFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
GFDA GDP G TP G++ + LM A GK++L+LEGGYNL +++ V A ++ LL
Sbjct: 435 GFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLL 494
Query: 337 EDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
D S P S + + L FW L
Sbjct: 495 GDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 529
>gi|170052821|ref|XP_001862395.1| histone deacetylase [Culex quinquefasciatus]
gi|167873617|gb|EDS37000.1| histone deacetylase [Culex quinquefasciatus]
Length = 1108
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 215/361 (59%), Gaps = 9/361 (2%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV +YD+ + +H D HPE P RI I+++ + + R L + A L V
Sbjct: 513 RVCYVYDDLLLEHRNLHEDLHPEQPQRIARIFSRHEEYKLLPRMKRLKPRHATTDELCLV 572
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+ HVN+I+ ++ ++A K NS+Y + + E A LA GSV++V + V G+
Sbjct: 573 HSRQHVNVIRRTVERE---EMKQVADKFNSVYFHPKTFECATLATGSVLQVVDEVLNGQS 629
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S IVRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 630 RSGVCIVRPPGHHAESDMPHGFCIFNNVAIAAQYAIRDH---GLKRVLIVDWDVHHGNGT 686
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ SVHR++ TF+P + D Y +G G G G+N+N+PW GD +Y
Sbjct: 687 QHIFESNPKVLYMSVHRYDNATFFPKSKDANYDSVGNGTGEGFNVNIPWNKKGMGDQEYA 746
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + ++LP+A +F P+++++SAGFDAA GDPLGGC+VTP Y L A G++++
Sbjct: 747 AAFQQVILPIAYEFDPELVLVSAGFDAAIGDPLGGCKVTPEAYGHFTHWLSSLANGRVIV 806
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAY--PFESTWRVIQAVRKKLSAFWPT 370
LEGGYN+ SIS ++ C LL D P+ S+ Y P + I+ V FW +
Sbjct: 807 CLEGGYNVNSISYAMTLCTKSLLGDPLPMLHVSQRYNGPNAACVESIRNVLSVQEKFWKS 866
Query: 371 L 371
L
Sbjct: 867 L 867
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 227/442 (51%), Gaps = 33/442 (7%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ GL+YDE+ +H D +PE P R + + + + +RC V+ + A ++ +
Sbjct: 100 VRGPTGLVYDEKFAEHRCLWDDGYPECPERFTRVLERCRELKLVERCAVIEPRMASEEEV 159
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L+ HT + ++K+ Q + + ++S ++++++ S + + L+AGS IE+ + + E
Sbjct: 160 LTKHTPEQLEILKSTRGSQDVAALEELSSHYDAVFIHPSSYDCSLLSAGSTIELVDAILE 219
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + + AI+RPPGHHA E G+C +NNVA+AA L++R G+ +IL+VDWD+HHG
Sbjct: 220 GRVQNGMAIIRPPGHHAMKAEYNGYCFFNNVAIAAQHALDKR---GLKRILVVDWDIHHG 276
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+MF+ DPRVL+FS+HR+E GTF+P + + IGEG GLGYN NVP +
Sbjct: 277 QGTQRMFYDDPRVLYFSIHRYECGTFWPNLRESDFDCIGEGAGLGYNFNVPLNRIGMTNG 336
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA+W +LLPVA + G +TP Y +L LM AQGK
Sbjct: 337 DYLAIWQQLLLPVALE--------------------GQMEITPAFYPHLLSPLMSLAQGK 376
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWP 369
+ + LEGGY L S++ + LL D P+ P ES + I +W
Sbjct: 377 VAVVLEGGYCLTSLAEGGALTLRALLGDPCPLLVEKLQPPCESMQQTILNCVHSHRPYWK 436
Query: 370 TLADELPTKLTSLK----APPAHMI----SSSDSEDEDTKVETLEAV-LQVALSKLKVDD 420
L L L P H + + + E + ET +Q + K ++++
Sbjct: 437 NLQLNATYGLEELNNVNPQPNFHQVIQYYVQQEPKPEPVRYETRNCYPVQASEEKNRIEE 496
Query: 421 GHAELGMATPWRSELSKVDVFY 442
A L +AT ++V Y
Sbjct: 497 RLAMLQIATRLTFPATRVCYVY 518
>gi|336372977|gb|EGO01316.1| hypothetical protein SERLA73DRAFT_72261 [Serpula lacrymans var.
lacrymans S7.3]
Length = 678
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 217/353 (61%), Gaps = 11/353 (3%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
R ++ VG +Y M +H G H E P RI IW + A + Q+ + + AK +
Sbjct: 51 RILELTVGYVYSSEMLEHWCLRG--HEEQPERIIRIWKLISEAHLDQKMKRIPIRAAKRE 108
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIAS-KLNSIYLNEGSSEAAYLAAGSVIEVAER 127
+L VH+E+ + I+ I S +D A L S+Y+N G++ +A L+ G VIE
Sbjct: 109 EVLLVHSEDLWHRIQAIQSLTLQDIQDSEAYYDLLSLYVNTGTTRSALLSCGGVIEACLA 168
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
VA EL AFAIVRPPGHHAEPDE MGFC +NNVAVAA + P + +I+I+DWDV
Sbjct: 169 VARNELKKAFAIVRPPGHHAEPDEHMGFCFFNNVAVAARVVQLLTP---VKRIMILDWDV 225
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ+ F DP +L+ S+HR++ G FYP G + GEG G GY++N+PW
Sbjct: 226 HHGNGTQRAFNDDPSILYVSLHRYQNGQFYPGGTFGGISSCGEGAGRGYSVNIPWPEIGM 285
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GDADYL + I++P+A +F P+++IISAGFDA GDPLG CRVTP GY+ M L A
Sbjct: 286 GDADYLHAFTSIVMPIAMEFAPELVIISAGFDAVEGDPLGECRVTPIGYAHMTHMLSGLA 345
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLL----EDKPVAGSSEAYPFESTWRV 356
GK+++ALEGGY + + +NS LA V+L E+ P ++EA E+ W+V
Sbjct: 346 GGKLIVALEGGYCVDATANSALAVTRVMLGEPPEELPPMTATEA-ATETVWQV 397
>gi|238879680|gb|EEQ43318.1| histone deacetylase HDA1 [Candida albicans WO-1]
Length = 833
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/384 (42%), Positives = 223/384 (58%), Gaps = 27/384 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGI---PQRCVV----- 59
+ GL+YD RM H Y HPE+P RI I+ KL AGI P +
Sbjct: 118 KTGLVYDVRMRYHAKVFTSYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGP 177
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL---NSIYLNEGSSE 112
+ +EA + +L VH+E+H+ I++ D RD++ + +SIY+N S
Sbjct: 178 FMLKIPIREATSEEILQVHSEDHLKFIQSTE----DMSRDQLLKETETGDSIYVNNDSYL 233
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + ++ AIVRPPGHHAEP+ GFCL++NVAVAA +L
Sbjct: 234 SAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNY 293
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + +I+IVDWD+HHGN TQK F+ DPRVL+ S+HR E G FYP G +GEGP
Sbjct: 294 PE-SVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGP 352
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+ IN+PW + D DY+ ++ I+ PV +F PD+II+S+GFDAA GD +G C VT
Sbjct: 353 GEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVT 412
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL SIS S LA VL+ + P + P
Sbjct: 413 PAGYGYMTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPP-ENTITLRPQAE 471
Query: 353 TWRVIQAVRKKLSAFWPTLADELP 376
V+ V K S ++ +L + +P
Sbjct: 472 AIEVVDEVIKIQSKYFKSLRNGIP 495
>gi|428175094|gb|EKX43986.1| hypothetical protein GUITHDRAFT_157988 [Guillardia theta CCMP2712]
Length = 307
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/306 (47%), Positives = 199/306 (65%), Gaps = 8/306 (2%)
Query: 23 MCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLI 82
M H +GD+HPE P+RI A++ L AGI +RC + +E ++ +L VH+ H +
Sbjct: 1 MTLHRPEEGDHHPERPHRIAAMYQHLLDAGIARRCTQIKGRECTEEEVLMVHSLQHWQQV 60
Query: 83 KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRP 142
S+ +I + Y NE S+ A +A G+V EV RV GE + A+VRP
Sbjct: 61 HTSSAGVARGCCTQIGA---DTYCNEFSALCARMATGTVAEVCRRVLRGEAANGAALVRP 117
Query: 143 PGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPR 202
PGHHAE + MGFC +N VAVAA + E G+ ++LI+DWDVHHGN TQ MF+KDP
Sbjct: 118 PGHHAEHETIMGFCFFNYVAVAAEI---AKREFGLQRVLILDWDVHHGNGTQSMFFKDPS 174
Query: 203 VLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLP 262
VL+ S+HR+E G FYP G +G G G G+NIN+PW + GDA+YL ++ I++P
Sbjct: 175 VLYISLHRYEDGNFYPGT--GGAHEVGVGAGRGFNINIPWPHDEVGDAEYLMAFESIVMP 232
Query: 263 VAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLG 322
VA+ F P+++++SAGFDAA GDPLGGC VTPYGY++M L A GK+V+ALEGGYNL
Sbjct: 233 VARSFNPELVLVSAGFDAADGDPLGGCSVTPYGYAMMTNMLRGLAGGKVVVALEGGYNLR 292
Query: 323 SISNSV 328
SI+NS+
Sbjct: 293 SIANSM 298
>gi|380012501|ref|XP_003690319.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 6-like [Apis
florea]
Length = 1179
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/414 (37%), Positives = 239/414 (57%), Gaps = 15/414 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V ++YD+RM KH D HPE P+RI I+ K Q + R V + A + LL V
Sbjct: 550 KVCIVYDDRMLKHYDISDDNHPEKPHRINIIYKKFQEYNLLDRSYVQQGRSATKEELLLV 609
Query: 74 HTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
HT+ +++ IKN +K S+ + A NS+YL+ + +A ++ GS+++V + V GE
Sbjct: 610 HTKEYIDKIKN--TKNLKSKELKKQAETYNSVYLHPETWSSACISTGSLLQVIDSVLNGE 667
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
S AI+RPPGHHA D A GFC++NNVA+AA + + + ++LIVDWDVH+GN
Sbjct: 668 SQSGIAIIRPPGHHATEDAACGFCIFNNVAIAAKYAIEFH---HVKRVLIVDWDVHYGNG 724
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F +D +VL+ SVHR++ G+F+P + Y+ +G G G+ +N+PW GDA+Y
Sbjct: 725 TQSIFEEDSKVLYISVHRYDNGSFFPNSKRANYSYVGSESGEGFTVNIPWNKKGMGDAEY 784
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + I++P+A F P++I+ISAGFDA GDPLGGC VTP Y + L A G+++
Sbjct: 785 IAAFQQIIMPIAYQFNPELILISAGFDACIGDPLGGCFVTPELYGHLTHWLSSLANGRVI 844
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
L+LEGGYN S+++++ C LL D S P S I V K +WP L
Sbjct: 845 LSLEGGYNTNSVAHAMAICTKSLLGDPLPMLESGQIPCASAVHTIHNVLKTQKQYWPNL- 903
Query: 373 DELPTKLTSLKAPPAHMISSSDSEDEDTKVETL--EAVLQVALSKLKVDDGHAE 424
+ +L P ++S + T + + E +L+ + SK+ +++ E
Sbjct: 904 ------IFNLSLPKEKILSKPKVSYKKTNEQIINNEELLKYSESKIALEEIETE 951
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 203/355 (57%), Gaps = 23/355 (6%)
Query: 4 KSGEGRTIKR-RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
K+ + IKR G+++D M +H +PE P R+ + + + G+ RC ++
Sbjct: 92 KAIDAYNIKRMETGIVFDHSMAEHKCLWDLNYPECPARLIRVLQRCEELGLISRCKLITP 151
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A + +L H++ ++++K+ + + ++SK ++IY++ + + LA GS I
Sbjct: 152 RLASENEILMKHSQEQIDILKSTDGCTDTNNLELLSSKYDAIYIHPSTYRLSLLAVGSTI 211
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
+ E + +GE+ + AI+RPPGHHA E G+C +NNVA+AA +L +KILI
Sbjct: 212 NLVESICKGEIQNGMAIIRPPGHHAMKSEYCGYCFFNNVAIAAEKVLCNNLA---SKILI 268
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHG +TQ+MF+ +P+V++FS+HR+E G F+P + + +G+ G GYN NVP
Sbjct: 269 VDWDVHHGQATQQMFYDNPQVIYFSIHRYENGEFWPNLRESNFHFVGDDLGEGYNFNVPL 328
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP----------------- 285
+ADYLA++ +LLP+A +F PD+II+SAG+DAA G P
Sbjct: 329 NKIGMTNADYLAIFQQVLLPMAYEFQPDLIIVSAGYDAALGCPEFNSNLIIIXGFNLLIE 388
Query: 286 --LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
G +TP Y+ +L L+ A GK+ + LEGGY L S+S S + LL D
Sbjct: 389 NEKGEMLITPACYAHLLSSLLCLASGKVAVILEGGYCLKSLSESAALTLRTLLND 443
>gi|68475296|ref|XP_718366.1| likely class II histone deacetylase subunit Hda1p [Candida albicans
SC5314]
gi|68475497|ref|XP_718271.1| likely class II histone deacetylase subunit Hda1p [Candida albicans
SC5314]
gi|46440031|gb|EAK99342.1| likely class II histone deacetylase subunit Hda1p [Candida
albicans SC5314]
gi|46440130|gb|EAK99440.1| likely class II histone deacetylase subunit Hda1p [Candida
albicans SC5314]
Length = 833
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/384 (42%), Positives = 223/384 (58%), Gaps = 27/384 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGI---PQRCVV----- 59
+ GL+YD RM H Y HPE+P RI I+ KL AGI P +
Sbjct: 118 KTGLVYDVRMRYHAKVFTSYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGP 177
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL---NSIYLNEGSSE 112
+ +EA + +L VH+E+H+ I++ D RD++ + +SIY+N S
Sbjct: 178 FMLKIPIREATSEEILQVHSEDHLKFIQSTE----DMSRDQLLKETETGDSIYVNNDSYL 233
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + ++ AIVRPPGHHAEP+ GFCL++NVAVAA +L
Sbjct: 234 SAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNY 293
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + +I+IVDWD+HHGN TQK F+ DPRVL+ S+HR E G FYP G +GEGP
Sbjct: 294 PE-SVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGP 352
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+ IN+PW + D DY+ ++ I+ PV +F PD+II+S+GFDAA GD +G C VT
Sbjct: 353 GEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVT 412
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL SIS S LA VL+ + P + P
Sbjct: 413 PAGYGYMTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPP-ENTITLRPQAE 471
Query: 353 TWRVIQAVRKKLSAFWPTLADELP 376
V+ V K S ++ +L + +P
Sbjct: 472 AIEVVDEVIKIQSKYFKSLRNGIP 495
>gi|432951475|ref|XP_004084833.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 6-like, partial
[Oryzias latipes]
Length = 822
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/377 (40%), Positives = 227/377 (60%), Gaps = 9/377 (2%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+YDERM +H +HPE P RI I+++ Q G+ RC ++ ++ A ++ L H
Sbjct: 213 TGLVYDERMMEHVNLWDRHHPEQPQRIFKIFSRHQQLGLVDRCQLIQSRLATEEELAMCH 272
Query: 75 TENHVNLIKNISSKQFDSRRD--RIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+ H I+ +S+ RD R+ + SI+++ S ++A LAAGS E + G+
Sbjct: 273 SLQH---IQQMSATATMKPRDLHRLGDEFVSIFISNQSFQSAQLAAGSCFAAVEHMLNGQ 329
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+N+A AIVRPPGHHAE D GFCL+N A+ A +L +ILI+DWDVHHGN
Sbjct: 330 VNNAVAIVRPPGHHAEMDFPCGFCLFNTTALTARHAQKVSHDL---QILILDWDVHHGNG 386
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F D VL+ S+HR++ G F+P++ DG +G G GYN+N+ W GR GD+DY
Sbjct: 387 TQHIFEDDNSVLYISLHRYDNGAFFPSSKDGAPENVGVAKGAGYNVNLAWSGGRMGDSDY 446
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
LA + +++P+A +F P ++++SAGFDAA GDPLGG VTP GY+ LM A G+++
Sbjct: 447 LAAFHQVVMPIATEFNPGLVLVSAGFDAAQGDPLGGYHVTPEGYAHFTHMLMSLAGGRVL 506
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV-IQAVRKKLSAFWPTL 371
LEGGYNL SIS+S+ AC +VLL D P + ++ P V I V + + +W +L
Sbjct: 507 FILEGGYNLKSISDSMAACTSVLLGDPPPSLATPLPPPHHCAAVAINKVIQHHAPYWKSL 566
Query: 372 ADELPTKLTSLKAPPAH 388
++P + + P H
Sbjct: 567 RVQIPESVRAFLPSPKH 583
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 87/133 (65%)
Query: 204 LFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPV 263
L+FS+HR+E +F+P + + +G G +G NIN+PW DADY++ + H+LLPV
Sbjct: 1 LYFSIHRYEHASFWPHLPESDSSFVGSGHAIGRNINLPWNKIGMSDADYISAFQHVLLPV 60
Query: 264 AKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGS 323
A +F P ++++SAGFDAAAGDP G V+P + + LM A+G++VL LEGGYNL +
Sbjct: 61 AYEFQPQLVLVSAGFDAAAGDPKGEMNVSPQCFHTLTHMLMSLAEGRLVLVLEGGYNLKA 120
Query: 324 ISNSVLACMNVLL 336
+ AC+ LL
Sbjct: 121 TAEGAAACVRALL 133
>gi|58264444|ref|XP_569378.1| histone deacetylase clr3 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134110099|ref|XP_776260.1| hypothetical protein CNBC6490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258932|gb|EAL21613.1| hypothetical protein CNBC6490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225610|gb|AAW42071.1| histone deacetylase clr3, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 737
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/374 (44%), Positives = 225/374 (60%), Gaps = 24/374 (6%)
Query: 14 RVGLLYDERMCKH----------NTPD-GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
R G +YD M H N D GD HPE+P RIK I+ +L G+ +R L+
Sbjct: 60 RTGYIYDPLMMLHCMEGYMPTAENVMDNGDGHPEDPMRIKRIFTRLAEQGLIRRMKRLDF 119
Query: 63 KEAKDKNLLSVHTE---NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAG 119
+E K + +L VH E + V + +S +Q ++ S+Y+ ++ A L+AG
Sbjct: 120 EEVKFEQVLLVHGEEMWDKVQATELLSDQQIQDMKEYYDQL--SLYVCRETAHCARLSAG 177
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI-N 178
VI+ V + E+ +AFAIVRPPGHHAEP+E MGFC +NNVAVA + E G+
Sbjct: 178 GVIQACRSVCKNEVRNAFAIVRPPGHHAEPNEHMGFCFFNNVAVATREMQRE----GLAK 233
Query: 179 KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNI 238
K+LI+DWDVHHGN TQ+ FW D VL+ S+HRHE GTFYP +D G M+G+G G+G ++
Sbjct: 234 KVLILDWDVHHGNGTQRAFWHDGDVLYMSLHRHEGGTFYPNSDFGSLNMVGDGEGVGKSV 293
Query: 239 NVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSV 298
N+PW GDADY+ + I++P+A +F PD++IISAGFDAA GD LG CRVTP Y
Sbjct: 294 NIPWPGPGFGDADYIYAFQRIIMPIAYEFDPDLVIISAGFDAADGDMLGQCRVTPAAYGH 353
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL-EDKPVAGSSEAYPFESTWRVI 357
M L A GK+V+ALEGGYNL +IS+S LA VLL E P G A E+ V+
Sbjct: 354 MTHMLSSLAGGKLVVALEGGYNLRAISDSALAVARVLLGEIPPELGIMRAS--EAATEVV 411
Query: 358 QAVRKKLSAFWPTL 371
V + S +W +
Sbjct: 412 YQVALEQSKYWKCI 425
>gi|336385808|gb|EGO26955.1| hypothetical protein SERLADRAFT_436772 [Serpula lacrymans var.
lacrymans S7.9]
Length = 681
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 217/353 (61%), Gaps = 11/353 (3%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
R ++ VG +Y M +H G H E P RI IW + A + Q+ + + AK +
Sbjct: 51 RILELTVGYVYSSEMLEHWCLRG--HEEQPERIIRIWKLISEAHLDQKMKRIPIRAAKRE 108
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIAS-KLNSIYLNEGSSEAAYLAAGSVIEVAER 127
+L VH+E+ + I+ I S +D A L S+Y+N G++ +A L+ G VIE
Sbjct: 109 EVLLVHSEDLWHRIQAIQSLTLQDIQDSEAYYDLLSLYVNTGTTRSALLSCGGVIEACLA 168
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
VA EL AFAIVRPPGHHAEPDE MGFC +NNVAVAA + P + +I+I+DWDV
Sbjct: 169 VARNELKKAFAIVRPPGHHAEPDEHMGFCFFNNVAVAARVVQLLTP---VKRIMILDWDV 225
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ+ F DP +L+ S+HR++ G FYP G + GEG G GY++N+PW
Sbjct: 226 HHGNGTQRAFNDDPSILYVSLHRYQNGQFYPGGTFGGISSCGEGAGRGYSVNIPWPEIGM 285
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GDADYL + I++P+A +F P+++IISAGFDA GDPLG CRVTP GY+ M L A
Sbjct: 286 GDADYLHAFTSIVMPIAMEFAPELVIISAGFDAVEGDPLGECRVTPIGYAHMTHMLSGLA 345
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLL----EDKPVAGSSEAYPFESTWRV 356
GK+++ALEGGY + + +NS LA V+L E+ P ++EA E+ W+V
Sbjct: 346 GGKLIVALEGGYCVDATANSALAVTRVMLGEPPEELPPMTATEA-ATETVWQV 397
>gi|350400444|ref|XP_003485837.1| PREDICTED: histone deacetylase 6-like [Bombus impatiens]
Length = 1173
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 245/425 (57%), Gaps = 16/425 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V ++YD+RM KH D HPE P+RI I+ K Q + RC V + A + L+ V
Sbjct: 546 KVCIVYDDRMLKHCDMSNDNHPEKPHRINIIYKKYQECNLLDRCYVQQGRSATREELILV 605
Query: 74 HTENHVNLIK---NISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
H++ +++ IK N++ K+ R A NS+YL+ + +A ++ GS+++V + V
Sbjct: 606 HSKEYIDSIKDTENLNPKELK----RQAENYNSVYLHPETWTSACISTGSLLQVVDSVLN 661
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
GE S AIVRPPGHHA + A GFC++NN+AVAA + + + ++LIVDWDVHHG
Sbjct: 662 GESQSGIAIVRPPGHHAAENTACGFCIFNNIAVAARYAVEFH---HVKRVLIVDWDVHHG 718
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ +F +DP++L+ SVHR++ G F+P + Y+ +G G G+ +N+PW GDA
Sbjct: 719 NGTQSIFEEDPKILYMSVHRYDNGNFFPNSKRANYSYVGSLSGEGFTVNIPWNKKGMGDA 778
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
+Y+A + I++P+A F P+++++SAGFDA GDPLGGC VTP Y + L A G+
Sbjct: 779 EYIAAFQQIIMPIAYQFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWLSSLANGR 838
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWP 369
I+L+LEGGYN+ S+++++ C LL D P+ + + P S I V K +W
Sbjct: 839 IILSLEGGYNINSVAHAMAICTKSLLGDPLPILENGQT-PCASAIHTINNVIKTQKQYWT 897
Query: 370 TLAD--ELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSKLKVDDGHAELGM 427
L LP + K H+ ++ D + ++ E+ ++AL +++ +
Sbjct: 898 HLVFNLSLPKERVLPKPKVPHIKTNERVIDSEEILKHSES--KIALEEIETEKMQTRQKN 955
Query: 428 ATPWR 432
T W+
Sbjct: 956 LTTWK 960
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 203/336 (60%), Gaps = 4/336 (1%)
Query: 4 KSGEGRTIKRR-VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
K+ + IKR+ G+++D M +H +PE P R+ + + + G+ RC +
Sbjct: 107 KAIDAYNIKRKETGIVFDRSMTEHKCLWDPSYPECPARLIRVMQRCEELGLINRCKFVTP 166
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
++A + +L H++ ++++K + ++S ++IY++ + + + LA GS I
Sbjct: 167 RQASEDEILMKHSQEQIDILKATDECTDIDSLELLSSTYDAIYIHPSTYQLSLLAVGSTI 226
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
+ E + + E+ + AI+RPPGHHA E G+C +NNVA+AA +L+ +KILI
Sbjct: 227 NLVESICKEEIQNGMAIIRPPGHHAMKSEYCGYCFFNNVAIAAEKVLSSNLA---SKILI 283
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWD+HHG +TQ+MF+ DPRV++FS+HR+E G F+P + + +G+G G GYN NVP
Sbjct: 284 VDWDIHHGQATQQMFYNDPRVIYFSIHRYENGEFWPNLRESNFHFVGDGLGEGYNFNVPL 343
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ADYLA++ +LLP+A +F PD+II+SAG+DAA G P G +TP Y+ +L
Sbjct: 344 NKTGMTNADYLAIFQQVLLPMAYEFQPDLIIVSAGYDAALGCPEGEMLLTPACYAHLLSS 403
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
L+ A GK+ + LEGGY L S++ S + LL D
Sbjct: 404 LLSLASGKVAVILEGGYCLKSLAESAALTLRTLLGD 439
>gi|321460654|gb|EFX71695.1| hypothetical protein DAPPUDRAFT_308757 [Daphnia pulex]
Length = 357
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 217/350 (62%), Gaps = 9/350 (2%)
Query: 23 MCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLI 82
M H H E P RI +++ KLQ +G+ RC+ L+A+ A + LL +HT ++V+ +
Sbjct: 1 MALHRNVKQPSHLEQPARITSVYQKLQESGVLDRCLQLDARIATREELLWLHTADYVDEL 60
Query: 83 KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRP 142
S K+ S + + +S++L + +AA L+AGS ++V E + GE S FA++RP
Sbjct: 61 SATSEKK-QSILTALERQYDSVFLCPETYQAALLSAGSSLQVVESILSGESRSGFAVIRP 119
Query: 143 PGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPR 202
PGHHAE DEA GFC +NN A+AA + + + +ILIVDWD+HHGN QKMF +DPR
Sbjct: 120 PGHHAESDEAFGFCYFNNTALAAKYAIENHQ---LERILIVDWDIHHGNGIQKMFEEDPR 176
Query: 203 VLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLP 262
VL+ S+HR + F P N D M+G GPG+G+N+N+ W + GD++YLA + I++P
Sbjct: 177 VLYISLHRLDIFPFNPENCD--CNMVGTGPGVGFNVNIAWPSKGMGDSEYLAAFRRIIMP 234
Query: 263 VAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLG 322
+A + P +++++AGFDAA GDPLGGC+V+P GY M L A+G++ + LEGGYNL
Sbjct: 235 IANQYNPQLVLVAAGFDAALGDPLGGCKVSPEGYGQMCHMLTSLAEGRVAVLLEGGYNLK 294
Query: 323 SISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
S+S+S+L C N LL D P P + IQ V L +W +L
Sbjct: 295 SVSDSMLMCANALLGDPLPTTLIGALQPGAAV--TIQRVANYLLPYWTSL 342
>gi|409080659|gb|EKM81019.1| hypothetical protein AGABI1DRAFT_127061 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 547
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/366 (44%), Positives = 214/366 (58%), Gaps = 21/366 (5%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VG +Y M H D HPE P RI IW L +R + L + + L VH
Sbjct: 34 VGYVYSSEMTTHLKLGDDPHPEQPQRIVRIWKMLSDYHYIKRMLWLPIRPVTREEALLVH 93
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLN----SIYLNEGSSEAAYLAAGSVIEVAERVAE 130
TE+H + ++ I Q+ + + + S+ S+Y+ G++ AA L+ G VIE A VA+
Sbjct: 94 TEDHWDKVQAI---QYMTDQQIVDSEAYYEQLSLYVMAGTTRAALLSCGGVIEAALAVAQ 150
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G L AIVRPPGHHAEPDE MGFC +NN+AVAA + P I KILI+DWDVHHG
Sbjct: 151 GRLKKTLAIVRPPGHHAEPDEHMGFCFFNNIAVAARVVQQLTP---IKKILILDWDVHHG 207
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ+ F DP VL+ S+HR+E G FYP G GE GLGY++NVPW GDA
Sbjct: 208 NGTQRAFNDDPSVLYMSLHRYEQGNFYPTGPFGSMQSCGEEAGLGYSVNVPWPCAGVGDA 267
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY+ + ++LP+ +F PD+++ISAGFDAAAGD LG C VTP GY+ M L A G+
Sbjct: 268 DYIYAFQKVILPIGLEFAPDLVMISAGFDAAAGDELGECLVTPAGYAHMTHMLAGLANGR 327
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK-----PVAGSSEAYPFESTWRVIQAVRKKLS 365
+V+ALEGGYNL S S S LA VLL + P+ S E E+ W V K+ S
Sbjct: 328 MVVALEGGYNLDSNSVSALAVTKVLLGEAPDQLPPLVASDEG--TETVW----LVAKEQS 381
Query: 366 AFWPTL 371
+W ++
Sbjct: 382 KYWKSV 387
>gi|348540413|ref|XP_003457682.1| PREDICTED: histone deacetylase 6-like [Oreochromis niloticus]
Length = 1131
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 227/379 (59%), Gaps = 7/379 (1%)
Query: 10 TIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
++ GL+YDERM +H+ +HPE P RI I++K Q G+ RC + + A ++
Sbjct: 488 SVATTTGLVYDERMMEHSNLWDRHHPEQPQRIFKIFSKHQQLGLVDRCQRIPVRLATEEE 547
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L H+ H+ +K + + ++ + SIYLN+ S + A LAAGS + +++
Sbjct: 548 LSLCHSMQHIEQMKATAVMK-PRELHKLGDEFVSIYLNQQSFQCARLAAGSCLNALDQIL 606
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
G++ +A AIVRPPGHHAE D GFCL+N A+AA + + + +ILI+DWDVHH
Sbjct: 607 CGQVTNAVAIVRPPGHHAERDYPCGFCLFNTAALAARYAKKASHD-PLMRILILDWDVHH 665
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ MF D VL+ S+HR++ G F+P+++D +G G G+N+NV W GR GD
Sbjct: 666 GNGTQHMFEDDDSVLYISLHRYDNGAFFPSSEDAAPDKVGVAKGAGFNVNVAWSGGRMGD 725
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
+DYLA + +++P+A +F P ++++SAGFDAA GDPLGG VTP GY+ + LM A G
Sbjct: 726 SDYLAAFHRVVMPIATEFNPSLVLVSAGFDAARGDPLGGYNVTPEGYAHLTHMLMSLAGG 785
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSE-AYPFESTWRVIQAVRKKLSAFW 368
++++ LEGGYNL SIS+S+ C +VLL D P A + P S I V + +W
Sbjct: 786 RVLVILEGGYNLSSISDSMAMCTSVLLGDPPPALVTPLPPPHHSAVATINEVIRYHVPYW 845
Query: 369 PTLADELP----TKLTSLK 383
+L +P L SLK
Sbjct: 846 RSLRIHIPESVRAALPSLK 864
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 207/336 (61%), Gaps = 7/336 (2%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
H E+P+R+ A+ +L+ + C+ + +EA ++ LL H +++V+LIK+ + +
Sbjct: 124 HLESPDRVTAVMKELERQDLLPLCIRVEPREATEEELLLAHMKHYVDLIKSTQTMTL-AE 182
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
+++K +SIYL+ S + + A G+V+++ +RV EL + FAI+RPPGHHA+ +E
Sbjct: 183 LQTLSNKYDSIYLHPDSFKVSVTAVGAVLQLVDRVMTSELKNGFAIIRPPGHHAQANECN 242
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
G+ ++NNVA+AA + I+++LIVDWDVHHG Q F +DP VL+FSVHR+E
Sbjct: 243 GYSIFNNVAIAARYAQTRH---AISRVLIVDWDVHHGQGIQYRFQEDPSVLYFSVHRYEQ 299
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
G+F+P + +G GP G NIN+PW DADY+A + +LLPVA +F P +++
Sbjct: 300 GSFWPHLPESDSHFVGSGPAEGRNINLPWNQTGMTDADYIAAFQQVLLPVAYEFQPQLVL 359
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMN 333
+SAGFDAA GD G V+P + V+ LM A+G++VLALEGGYN S + S AC+
Sbjct: 360 VSAGFDAAVGDLKGDMCVSPQCFQVLTHMLMSLAEGRLVLALEGGYNYESSAESAAACIR 419
Query: 334 VLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWP 369
LL + P +S +Q++ + +SA +P
Sbjct: 420 ALLGGACPPLTPPTAPSDSA---LQSISQTISALYP 452
>gi|195130223|ref|XP_002009552.1| GI15174 [Drosophila mojavensis]
gi|193908002|gb|EDW06869.1| GI15174 [Drosophila mojavensis]
Length = 1137
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 213/365 (58%), Gaps = 11/365 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV YD +M +H HPE P RI+ I + R L+A+ A +
Sbjct: 514 RVCYAYDAQMLQHFNLHDATHPEQPMRIRQIHQMHDDYQLLGRMHQLSARAATTDEVCLA 573
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + + + + ++ + NS+YL+ + E A LA+GSV++ + V G+
Sbjct: 574 HTRAHVNSVRRLLGRSVEELQ-QMGAGYNSVYLHPRTFECATLASGSVLQAVDSVLRGQS 632
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAEPD+ GFC++NN+A+AA + + E G+ +ILIVDWDVHHGN T
Sbjct: 633 RSGICNVRPPGHHAEPDQPHGFCIFNNIAIAAQYAIRE---FGLERILIVDWDVHHGNGT 689
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G F+P G Y M+G+ G G+N+N+PW GD +Y
Sbjct: 690 QHIFESNPKVLYMSIHRYEHGAFFPKGPAGNYDMVGKNAGRGFNVNIPWNKKGMGDLEYA 749
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ ++LP+A +F P ++++SAGFDAA GDPLGGC+VTP GY + L A G+I++
Sbjct: 750 LAFQQLILPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGLFTHWLSALAGGRIIV 809
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDK-------PVAGSSEAYPFESTWRVIQAVRKKLSA 366
LEGGYN+ SIS ++ C LL D P A S F+S +Q ++
Sbjct: 810 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQFIPAAQRSATVAFQSCVETLQLCVEQQHQ 869
Query: 367 FWPTL 371
+W +L
Sbjct: 870 YWKSL 874
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 188/324 (58%), Gaps = 3/324 (0%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+YDE M +H H E P R + + + RC+ L ++ A +L +H
Sbjct: 84 TALIYDESMSEHCCLWDSTHQERPERFTRTMERCRELNLVDRCLQLKSRLATKDEILKLH 143
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ H ++ S + + + ++S ++IY++ + + + LA+GS IE+ +++ G+
Sbjct: 144 SIEHYERLEQTSGVRNEEAMEELSSHYDAIYIHPSTFKLSLLASGSTIELIDQLLLGKAQ 203
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA E G+C +NNVA+AA L + +ILI+D+DVHHG TQ
Sbjct: 204 NGMAIIRPPGHHAMKSEFNGYCYFNNVALAAQHALEAHQ---LQRILIIDYDVHHGQGTQ 260
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+ F+ D RVL+FS+HR+E G+F+P + Y IG GPG GYN NVP G+ DYLA
Sbjct: 261 RFFYNDSRVLYFSIHRYEHGSFWPNLQESDYHAIGSGPGTGYNFNVPLNTKGMGNGDYLA 320
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
++ +LLPVA ++ P++II+SAG+DAA G P G VTP Y +L L+ A ++ +
Sbjct: 321 IFQQLLLPVAMEYQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLHLANCRVAVV 380
Query: 315 LEGGYNLGSISNSVLACMNVLLED 338
LEGGY + S+S + LL D
Sbjct: 381 LEGGYCVESLSEGAALTLRALLGD 404
>gi|321473004|gb|EFX83972.1| putative histone deacetylase HDAC6 protein [Daphnia pulex]
Length = 1022
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 147/361 (40%), Positives = 217/361 (60%), Gaps = 7/361 (1%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K RV +YDERM H + HPE P RI +I+ KL G+ +RC L+A++A + LL
Sbjct: 468 KHRVCFIYDERMALHRNINEPGHPERPARITSIYQKLMEFGVLERCHRLDARDADREELL 527
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
+H ++++ I + K+ S +++ + SI++ + +AA L+AGS +++ E + G
Sbjct: 528 WLHQADYIDEIAATAGKK-QSTLNQLERQYGSIFICPETYQAALLSAGSSLQIVESILSG 586
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
E S +VRPPGHHAE DEA GFC +NN A+AA + + + +ILIVDWDVHHGN
Sbjct: 587 ESRSGIGVVRPPGHHAECDEAYGFCFFNNTALAAKYAIEIH---HLERILIVDWDVHHGN 643
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
Q+MF +DPRVL+ S+HR + F P D +++G G G GY +N+ W GD +
Sbjct: 644 GIQRMFEEDPRVLYISLHRFDIFPFKPEESDC--SVVGSGSGAGYTVNIAWPKRGMGDTE 701
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA + I++P+A + P +++++AGFDAA GDPLGGC++TP GY M L AQG++
Sbjct: 702 YLAAFQQIIMPIAYQYNPQLVLVAAGFDAAQGDPLGGCKITPEGYGQMTNMLSSLAQGRV 761
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+ LEGGYNL SIS+S+ C LL D P+ + I+ V L +W +L
Sbjct: 762 AILLEGGYNLDSISHSMTMCAKALLGD-PLPSPRIEPLNPAAISTIKQVVSHLLPYWSSL 820
Query: 372 A 372
Sbjct: 821 C 821
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 218/362 (60%), Gaps = 5/362 (1%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
I+ + G++YDERM +H +PE P R + + + G+ QRCV + ++A L
Sbjct: 41 IRGKTGIVYDERMVEHQCLWDPNYPECPERFTRVLERCREYGLAQRCVEIQPRKATQDEL 100
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HT + + L+K + I+S ++IY++ ++E A LAAGS +E+ + + +
Sbjct: 101 LKLHTPDRIELLKGTDGSPDAEALEAISSGYDAIYIHPSTNELALLAAGSTVEMVDALLD 160
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G++ + A++RPPGHHA E G+C +NNVAVAA L+ + G+ KILIVDWDVHHG
Sbjct: 161 GKIQNGMAVIRPPGHHAMKSEYCGYCFFNNVAVAAQHALDNK---GVEKILIVDWDVHHG 217
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
+TQ+MF++DPRVL+FSVHR+E G F+P + + IG G G G+N+NVP + G+A
Sbjct: 218 QATQQMFYEDPRVLYFSVHRYEHGAFWPNLRESDFHYIGSGAGKGFNVNVPLNKTKMGNA 277
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA+W +LLP+A +F P++II+SAG+DAA G G +TP YS + LM AQGK
Sbjct: 278 DYLAIWHQLLLPLAYEFQPELIIVSAGYDAALGCFEGEMEITPACYSHLTSSLMGLAQGK 337
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWP 369
+ + LEGGY L S++ + LL D PV E P +S I + L W
Sbjct: 338 LAVVLEGGYCLKSLAEGAALTLRTLLGDPCPVIAKIEQ-PCQSIQESILSAIYVLRPMWK 396
Query: 370 TL 371
L
Sbjct: 397 CL 398
>gi|242022432|ref|XP_002431644.1| histone deacetylase hda2, putative [Pediculus humanus corporis]
gi|212516952|gb|EEB18906.1| histone deacetylase hda2, putative [Pediculus humanus corporis]
Length = 1146
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 146/365 (40%), Positives = 217/365 (59%), Gaps = 6/365 (1%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
R RV YDE+M +H HPE P RI I+ + + +RC+ + ++ A ++
Sbjct: 499 RVPPNRVAFGYDEKMTEHRNNQESNHPEKPERITKIFLMHRDYNLLERCLSIKSRMATEE 558
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
+L HT +H+ +K + + + ++ + +SIYL+ S E A LAAG++++V + V
Sbjct: 559 EILLSHTNSHLEDMKKLPTMSAEELNEK-GNSYDSIYLHSKSYECALLAAGTLLQVVDSV 617
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
GE S A+VRPPGHHAE D A GFCL+NNV++AA + + + +IL++DWDVH
Sbjct: 618 INGEARSGVAVVRPPGHHAEDDTACGFCLFNNVSIAAKYAIEVH---SLKRILVLDWDVH 674
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN--GR 246
HGN TQK+F +D RVL+ S+HR+ G F+P +G + +G G G G+N+N+PW G
Sbjct: 675 HGNGTQKIFEEDDRVLYISLHRYNHGRFFPTTKEGDHDRVGIGRGEGFNVNIPWNRPGGG 734
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
D DY+A + I+LP+A F P+++++SAGFDA DPLG C+VTP Y+ M L
Sbjct: 735 MSDGDYIAAFHSIVLPIAYQFNPELVLVSAGFDACIHDPLGHCKVTPEAYAHMTHWLTTL 794
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSA 366
A GK++L+LEGGYN+ SIS ++ C LL D ++ P S IQ V
Sbjct: 795 ANGKVILSLEGGYNVTSISYALTLCTKALLGDPLPPLTTTLAPCSSAVETIQNVLNTQEK 854
Query: 367 FWPTL 371
+WP L
Sbjct: 855 YWPCL 859
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 217/363 (59%), Gaps = 4/363 (1%)
Query: 7 EGRTI-KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
E +TI + G++YD++M KH +PENP R I + + + RC + ++ A
Sbjct: 55 EAKTIIAGKTGIVYDDQMVKHFCMWDKNYPENPERFSKIIERCKELKLIDRCTRIESRLA 114
Query: 66 KDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVA 125
++ +L+ HT + + ++K ++ +++ ++++SK +S+Y+N + E + LA GS I++
Sbjct: 115 TEEEILTQHTIDKIKVLKETQNENDETKLEQLSSKYDSVYVNNFTYECSLLAVGSTIDLV 174
Query: 126 ERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
+ + +GE+ + AI+RPPGHHA DE G+C YNNVA+AA L + + +ILIVDW
Sbjct: 175 DAICKGEIQNGMAIIRPPGHHAMRDEYCGYCFYNNVAIAAQLALKK---FNLQRILIVDW 231
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHG +TQ+MF+ D RV++FS+HR++ G+F+P + + IG+ G G N N+P
Sbjct: 232 DIHHGQATQQMFYDDKRVVYFSIHRYDHGSFWPELRESNFHYIGDSAGKGKNFNIPLNET 291
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
DADYLA++ +LLP+A +F P++IIISAG+DAA P G V+P YS +L LM
Sbjct: 292 GMKDADYLAIFQQVLLPMAYEFQPELIIISAGYDAAINCPEGSMEVSPACYSHLLSPLMG 351
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLS 365
A GK+ + LEGGY L S+S V + LL D + P +S I V
Sbjct: 352 LAGGKVAVILEGGYCLKSLSEGVALTLRTLLGDPAPSLIDFGLPCDSVVESILNVIYVHK 411
Query: 366 AFW 368
+W
Sbjct: 412 PYW 414
>gi|388854062|emb|CCF52212.1| related to HDA1-histone deacetylase A [Ustilago hordei]
Length = 743
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 217/361 (60%), Gaps = 5/361 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R GL+Y M H+ P HPE P RI I KLQ GI + + ++ K+K +L V
Sbjct: 89 RSGLVYSSDMMLHSNPIDRDHPEKPVRIWMILRKLQEKGIIKHMKRIEIRQIKEKEVLLV 148
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLN--SIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H + ++N + D ++ + N S+Y+NE S+ AA L+ G +E+ + +A G
Sbjct: 149 HDKGIWKGVENSALYHPDILKEHVPMLENTSSLYINEHSAYAARLSCGGAVELCDAIASG 208
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+ + FA++RPPGHHAEP ++MGFC YNNVAVA LL + P I K+LI+DWDVHHGN
Sbjct: 209 RIRNGFAVIRPPGHHAEPHKSMGFCFYNNVAVATRCLLQKYPNT-IRKVLILDWDVHHGN 267
Query: 192 STQKMFWKDPRVLFFSVHRH-EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F D VL+ S+HR+ E G+FYP + G YT G GPG G ++NVPW + GDA
Sbjct: 268 GTQRAFESDAEVLYISLHRYDEDGSFYPGSSYGNYTSSGTGPGEGKSVNVPWPSKGMGDA 327
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY+ + H+++P+A++F PD +IISAGFDAA GDP+G RV+P GY+ M L QGK
Sbjct: 328 DYMYAFHHLVMPIAQEFAPDFVIISAGFDAAEGDPIGQNRVSPGGYAQMTHALTSLCQGK 387
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPT 370
+ + LEGGYN ++ S LA VLL K E + +Q V + S +W +
Sbjct: 388 VAVVLEGGYNPEVVAESSLAVTEVLLARK-TQEPQETVACTLAAQTVQQVCRFHSKYWKS 446
Query: 371 L 371
L
Sbjct: 447 L 447
>gi|426197573|gb|EKV47500.1| hypothetical protein AGABI2DRAFT_118070 [Agaricus bisporus var.
bisporus H97]
Length = 707
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 164/366 (44%), Positives = 214/366 (58%), Gaps = 21/366 (5%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VG +Y M H D HPE P RI IW L +R + L + + L VH
Sbjct: 89 VGYVYSSEMTTHLKLGDDPHPEQPQRIVRIWKMLSDYHYIKRMLWLPIRPVTREEALLVH 148
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLN----SIYLNEGSSEAAYLAAGSVIEVAERVAE 130
TE+H + ++ I Q+ + + + S+ S+Y+ G++ AA L+ G VIE A VA+
Sbjct: 149 TEDHWDKVQAI---QYMTDQQIVDSEAYYEQLSLYVMAGTTRAALLSCGGVIEAALAVAQ 205
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G L AIVRPPGHHAEPDE MGFC +NN+AVAA + P I KILI+DWDVHHG
Sbjct: 206 GRLKKTLAIVRPPGHHAEPDEHMGFCFFNNIAVAARVVQQLTP---IKKILILDWDVHHG 262
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ+ F DP VL+ S+HR+E G FYP G GE GLGY++NVPW GDA
Sbjct: 263 NGTQRAFNDDPSVLYISLHRYEQGNFYPTGPFGSMQSCGEEAGLGYSVNVPWPCAGVGDA 322
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY+ + ++LP+ +F PD+++ISAGFDAAAGD LG C VTP GY+ M L A G+
Sbjct: 323 DYIYAFQKVILPIGLEFAPDLVMISAGFDAAAGDELGECLVTPAGYAHMTHMLAGLANGR 382
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK-----PVAGSSEAYPFESTWRVIQAVRKKLS 365
+V+ALEGGYNL S S S LA VLL + P+ S E E+ W V K+ S
Sbjct: 383 MVVALEGGYNLDSNSVSALAVTKVLLGEAPDQLPPLVASDEGT--ETVW----LVAKEQS 436
Query: 366 AFWPTL 371
+W ++
Sbjct: 437 KYWKSV 442
>gi|198470023|ref|XP_001355195.2| GA19406 [Drosophila pseudoobscura pseudoobscura]
gi|198147145|gb|EAL32252.2| GA19406 [Drosophila pseudoobscura pseudoobscura]
Length = 1095
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/426 (37%), Positives = 237/426 (55%), Gaps = 30/426 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV Y+ M +H D HPE P RI+ I Q + R L+A+ A +
Sbjct: 509 RVCYAYNPEMMEHRNLDDLGHPEQPKRIQFIHKMHQDYQLLGRMKQLSARAATTDEICLA 568
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+ +HVN ++ + + + + + A+ NS+YL+ + A LAAGSV++ + V GE
Sbjct: 569 HSRSHVNTMRRVLGRDKEDLQAQ-AATYNSVYLHPATFGCATLAAGSVLQAVDSVLRGES 627
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
SA VRPPGHHAEPD+ GFC++NNVA+AA + + E G+ ++LI+DWDVHHGN T
Sbjct: 628 RSAICNVRPPGHHAEPDQPHGFCIFNNVAIAAQYAIRE---FGLKRVLILDWDVHHGNGT 684
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ SVHR+E GTF+P DG Y ++G+ G G+N+N+PW GD +Y
Sbjct: 685 QHIFESNPKVLYISVHRYENGTFFPKGPDGNYDVVGKHTGAGFNVNIPWNKKGMGDLEYA 744
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ I++P+A +F P+++++SAGFDAA GDPLGGC+V+P GY + L A G+I++
Sbjct: 745 LAFQQIVMPIAYEFQPELVLVSAGFDAAIGDPLGGCKVSPEGYGLFTHWLSALAGGRIIV 804
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAG-----SSEAYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P+ G F+S +Q +
Sbjct: 805 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPLLGVVALTRPPTTAFQSCLETLQCCVEVQR 864
Query: 366 AFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSKLKV--DDGHA 423
+W +L + + P + I +++ED L +L KL + DD
Sbjct: 865 QYWKSL------EFVGYRLPHGYQIGENNNED----------FLAASLLKLNISSDDAQG 908
Query: 424 ELGMAT 429
G T
Sbjct: 909 AAGGPT 914
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 197/328 (60%), Gaps = 3/328 (0%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ L+Y + M +H H E P+R + ++ + RC+ ++A+ A + +
Sbjct: 76 VRGETALVYHQSMEQHCCRWDPKHLECPDRFNRVLDRCNELKLLDRCLPVSARLATKQEI 135
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HT H L++ S D + ++S+ +SIY++ + + + LA+GS I++ + +
Sbjct: 136 LRLHTAQHFELLEQTSEVCDDQSMEELSSRFDSIYIHPSTFQCSLLASGSTIDLVDSIIT 195
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+AA L+ + +ILI+D+DVHHG
Sbjct: 196 GKAQNGMAIIRPPGHHAMKAEFNGYCFFNNVALAAQHALDVH---KLERILILDYDVHHG 252
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRVL+FS+HR E G F+P + Y IGEGPGLG+N NVP GD
Sbjct: 253 QGTQRFFYNDPRVLYFSIHRFEHGAFWPHLQESDYHAIGEGPGLGFNFNVPLNETGMGDG 312
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY+A++ +LLPVA ++ P++II+SAG+DAA G P G +VTP Y+ +L L+ A +
Sbjct: 313 DYMAIFQQLLLPVAMEYQPELIIVSAGYDAALGCPEGEMQVTPAFYAHLLNPLLRLADSR 372
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLED 338
+ + LEGGY L S++ M LL D
Sbjct: 373 VAVVLEGGYCLESLAEGAALTMRTLLGD 400
>gi|328781356|ref|XP_001121726.2| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 6 [Apis
mellifera]
Length = 1129
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/414 (36%), Positives = 238/414 (57%), Gaps = 15/414 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V ++YD+RM KH HPE P+RI I+ K Q + R V + A + LL V
Sbjct: 535 KVCIVYDDRMLKHYDISDANHPEKPHRINIIYKKFQEYNLLDRSFVQQGRSATKEELLLV 594
Query: 74 HTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
HT+ +++ IKN +K S+ + A NS+YL+ + +A ++ GS+++V + V GE
Sbjct: 595 HTKEYIDKIKN--TKNLKSKELKKQAETYNSVYLHPETWSSACISTGSLLQVVDNVLNGE 652
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
S AI+RPPGHHA D A GFC++NNVA+AA + + + ++LIVDWDVH+GN
Sbjct: 653 SQSGIAIIRPPGHHATEDAACGFCIFNNVAIAAKYAIEFH---HVKRVLIVDWDVHYGNG 709
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F +D +VL+ S+HR++ G+F+P + Y+ +G G G+ +N+PW GDA+Y
Sbjct: 710 TQSIFEEDSKVLYISIHRYDNGSFFPNSKRANYSYVGSESGEGFTVNIPWNKKGMGDAEY 769
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + I++P+A F P++I++SAGFDA GDPLGGC VTP Y + L A G+++
Sbjct: 770 IAAFQQIIMPIAYQFNPELILVSAGFDACIGDPLGGCFVTPELYGHLTHWLSSLANGRVI 829
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
L+LEGGYN SI++++ C LL D S P S I V K +WP L
Sbjct: 830 LSLEGGYNTNSIAHAMAICTKSLLGDPLPILESGQIPCASAVHTIHNVLKTQKQYWPNL- 888
Query: 373 DELPTKLTSLKAPPAHMISSSDSEDEDTKVETL--EAVLQVALSKLKVDDGHAE 424
+ +L P ++S + T + + E +L+ + SK+ +++ E
Sbjct: 889 ------IFNLSLPKEKILSKPKVSYKKTNEQIINNEELLKYSESKIALEEIETE 936
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 203/336 (60%), Gaps = 4/336 (1%)
Query: 4 KSGEGRTIKR-RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
K+ + IKR G+++D M +H +PE P R+ + + + G+ RC ++
Sbjct: 96 KAIDAYNIKRMETGIVFDHSMAEHKCLWDSNYPECPARLIRVLQRCEELGLISRCKLITP 155
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A + +L H++ ++++K+ + + ++SK ++IY++ + + LA GS I
Sbjct: 156 RLASENEILIKHSQEQIDILKSTDGCTDINNLELLSSKYDAIYIHPSTYRLSLLAVGSTI 215
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
+ E + +GE+ + AI+RPPGHHA E G+C +NNVA+AA +L +KILI
Sbjct: 216 NLVESICKGEIQNGMAIIRPPGHHAMKSEYCGYCFFNNVAIAAEKVLCNNLA---SKILI 272
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHG +TQ+MF+ +P+V++FS+HR+E G F+P + + +G+ G GYN NVP
Sbjct: 273 VDWDVHHGQATQQMFYDNPQVIYFSIHRYENGEFWPNLRESNFHFVGDDLGEGYNFNVPL 332
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ADYLA++ +LLP+A +F PD+II+SAG+DAA G P G +TP Y+ +L
Sbjct: 333 NKIGMTNADYLAIFQQVLLPMAYEFQPDLIIVSAGYDAALGCPEGEMLITPACYAHLLSS 392
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
L+ A GK+ + LEGGY L S+S S + LL D
Sbjct: 393 LLCLASGKVAVILEGGYCLKSLSESAALTLRTLLSD 428
>gi|14190349|gb|AAK55655.1| histone deacetylase HDA1 [Candida albicans]
Length = 653
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 223/387 (57%), Gaps = 27/387 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGI---PQRCVV----- 59
+ GL+YD RM H Y HPE+P RI I+ KL AGI P +
Sbjct: 118 KTGLVYDVRMRYHAKVFTSYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGP 177
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL---NSIYLNEGSSE 112
+ +EA + +L VH+E+H+ I++ D RD++ + +SIY+N S
Sbjct: 178 FMLKIPIREATSEEILQVHSEDHLKFIQSTE----DMSRDQLLKETETGDSIYVNNDSYL 233
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + ++ AIVRPPGHHAEP+ GFCL++NVAVAA +L
Sbjct: 234 SAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNY 293
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + +I+IVDWD+HHGN TQK F+ DPRVL+ S+HR E G FYP G +GEGP
Sbjct: 294 PE-SVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGP 352
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+ IN+PW + D DY+ ++ I+ PV +F PD+II+S+GFDAA GD +GGC VT
Sbjct: 353 GEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGGCHVT 412
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL S S S LA VL+ + P + P
Sbjct: 413 PAGYGYMTHTLKGIARGKLAVILEGGYNLDSTSKSALAVAKVLVGEPP-ENTITLRPQAE 471
Query: 353 TWRVIQAVRKKLSAFWPTLADELPTKL 379
V+ V K S ++ + + +P +
Sbjct: 472 AIEVVDEVIKIQSKYFKSSRNGIPNXI 498
>gi|393220433|gb|EJD05919.1| histone deacetylase clr3 [Fomitiporia mediterranea MF3/22]
Length = 733
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/369 (43%), Positives = 216/369 (58%), Gaps = 22/369 (5%)
Query: 14 RVGLLYDERMCKH---NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
R G +YD RM H + + + HPE P RI I+ +L+ G R + + +
Sbjct: 113 RFGYVYDVRMMNHAPVTSSNHEDHPEQPARIAGIYMRLRNFGCLLRMKHIPIRPVRKMEA 172
Query: 71 LSVHTENH---VNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAER 127
+ VH+E+H V +I + S+Q + S+Y+ ++ AA L+ G VIE A
Sbjct: 173 MLVHSEDHWEKVQMIARMDSEQI--AMSEAYYEFLSLYVCPSTTMAAQLSCGGVIEAALA 230
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
VA GEL +FAIVRPPGHHAEP+E MGFC +NNVAVAA + P + +ILI+DWDV
Sbjct: 231 VARGELEKSFAIVRPPGHHAEPEEHMGFCFFNNVAVAARVVQQLTP---LKRILILDWDV 287
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
H GN TQ+ F DP VL+ S+HR+E G FYP G GEG G G ++N+PW
Sbjct: 288 HQGNGTQRAFNDDPSVLYISIHRYENGIFYPGGPFGGLDSCGEGAGEGTSVNIPWPEAGM 347
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GDA+Y+ + I++P+A F P+++IISAGFDAA GD LG C VTP GY++M L A
Sbjct: 348 GDAEYIHAFTRIVIPIAMQFAPELVIISAGFDAADGDDLGECHVTPAGYAMMTHMLSSLA 407
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLED-----KPVAGSSEAYPFESTWRVIQAVRK 362
GK+V+ALEGGYN+ SISNS LA VLL D KPV + A E+ W V K
Sbjct: 408 GGKLVVALEGGYNVESISNSALAVTRVLLGDAPPELKPVVANEAAT--ETVW----LVAK 461
Query: 363 KLSAFWPTL 371
+ +W L
Sbjct: 462 RQHRYWQNL 470
>gi|195163866|ref|XP_002022770.1| GL14573 [Drosophila persimilis]
gi|194104793|gb|EDW26836.1| GL14573 [Drosophila persimilis]
Length = 1095
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 227/392 (57%), Gaps = 18/392 (4%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV Y+ M +H D HPE P RI+ I + + R L+A+ A +
Sbjct: 509 RVCYAYNPEMMEHRNLDDLGHPEQPKRIQFIHKMHEDYQLLGRMKQLSARAATTDEICLA 568
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+ +HVN ++ + + + + + A+ NS+YL+ + A LAAGSV++ + V GE
Sbjct: 569 HSRSHVNTMRRVLGRDKEDLQAQ-AATYNSVYLHPATFGCATLAAGSVLQAVDSVLRGES 627
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
SA VRPPGHHAEPD+ GFC++NNVA+AA + + E G+ ++LI+DWDVHHGN T
Sbjct: 628 RSAICNVRPPGHHAEPDQPHGFCIFNNVAIAAQYAIRE---FGLKRVLILDWDVHHGNGT 684
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ SVHR+E GTF+P DG Y ++G+ G G+N+N+PW GD +Y
Sbjct: 685 QHIFESNPKVLYISVHRYENGTFFPKGPDGNYDVVGKHTGAGFNVNIPWNKKGMGDLEYA 744
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ I++P+A +F P+++++SAGFDAA GDPLGGC+V+P GY + L A G+IV+
Sbjct: 745 LAFQQIVMPIAYEFQPELVLVSAGFDAAIGDPLGGCKVSPEGYGLFTHWLSALAGGRIVV 804
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAG-----SSEAYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P+ G F+S +Q +
Sbjct: 805 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPLLGVVALTRPPTTAFQSCLETLQCCVEVQR 864
Query: 366 AFWPTLADELPTKLTSLKAPPAHMISSSDSED 397
+W +L + + P + I +++ED
Sbjct: 865 QYWKSL------EFVGYRLPHGYQIGENNNED 890
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 197/328 (60%), Gaps = 3/328 (0%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ L+Y + M +H H E P+R + ++ + RC+ ++A+ A + +
Sbjct: 76 VRGETALVYHQSMEQHCCRWDPKHLECPDRFNRVLDRCNELKLLDRCLPVSARLATKQEI 135
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HT H L++ S D + ++S+ +SIY++ + + + LA+GS I++ + +
Sbjct: 136 LRLHTAQHFELLEQTSEVCDDQSMEELSSRFDSIYIHPSTFQCSLLASGSTIDLVDSIIT 195
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+AA L+ + +ILI+D+DVHHG
Sbjct: 196 GKAQNGMAIIRPPGHHAMKAEFNGYCFFNNVALAAQHALDVH---KLERILILDYDVHHG 252
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRVL+FS+HR E G F+P + Y IGEGPGLG+N NVP GD
Sbjct: 253 QGTQRFFYNDPRVLYFSIHRFEHGAFWPHLQESDYHAIGEGPGLGFNFNVPLNETGMGDG 312
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY+A++ +LLPVA ++ P++II+SAG+DAA G P G +VTP Y+ +L L+ A +
Sbjct: 313 DYMAIFQQLLLPVAMEYQPELIIVSAGYDAALGCPEGEMQVTPAFYAHLLNPLLRLADSR 372
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLED 338
+ + LEGGY L S++ M LL D
Sbjct: 373 VAVVLEGGYCLESLAEGAALTMRTLLSD 400
>gi|385304056|gb|EIF48091.1| histone deacetylase hda1 [Dekkera bruxellensis AWRI1499]
Length = 718
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/379 (41%), Positives = 218/379 (57%), Gaps = 27/379 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL YD RM H Y HPE+P RI I+ L G+ +
Sbjct: 44 KTGLCYDVRMRYHAKIYQSYLEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGRDNIGD 103
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSSE 112
+ + A D +L+VHT H+ IK ++ ++++ + + S+Y N S
Sbjct: 104 LMXKIPVRPATDAEILAVHTREHLEFIKKTTTMT----KEQLLHETDVGDSVYFNNDSYS 159
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A LA+G IE + V EG + +A A+VRPPGHHAEPD GFCL++NVAVAA +L
Sbjct: 160 SAKLASGGAIEACKAVVEGRVKNALAVVRPPGHHAEPDAPGGFCLFSNVAVAARAILKNY 219
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + KI IVDWDVHHGN TQK F+ DPRVL+ S+HR+E G +YP G +GEG
Sbjct: 220 PE-SVRKIAIVDWDVHHGNGTQKAFFNDPRVLYMSLHRYEQGKYYPGTPAGGADQVGEGA 278
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G+G+N+NVPW G GDA+Y+ + +++P+ +F PD +I+S+GFDAA GDP+GGC V+
Sbjct: 279 GVGFNVNVPWPTGGMGDAEYIYAFRKVIMPILYEFKPDFLIVSSGFDAAEGDPIGGCHVS 338
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GYS M + AQG I + LEGGYNL +IS S L VLL + P ++ P
Sbjct: 339 PSGYSQMTHYMKTIAQGNICVVLEGGYNLDAISVSALRVAKVLLGEAPEV-LQQSLPRPE 397
Query: 353 TWRVIQAVRKKLSAFWPTL 371
+ + V K S +W +L
Sbjct: 398 AVQAVSDVIKVQSRYWKSL 416
>gi|170117317|ref|XP_001889846.1| histone deacetylase complex protein [Laccaria bicolor S238N-H82]
gi|164635186|gb|EDQ99497.1| histone deacetylase complex protein [Laccaria bicolor S238N-H82]
Length = 705
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 221/385 (57%), Gaps = 41/385 (10%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VG +Y M H +P G HPE P RI IWN LQ + Q L + + + L VH
Sbjct: 47 VGFVYSTEMMAHFSPQG--HPERPARIDRIWNTLQNDQLTQNMKWLPIRPVRKEEALLVH 104
Query: 75 TENH---VNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
+++H V I+ +S +Q + S+Y+ G++ AA L+ G VIE VA G
Sbjct: 105 SDDHWDKVIAIQYMSDQQLADSEEYYEQM--SLYVMSGTTRAALLSCGGVIESCLAVARG 162
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
EL FAIVRPPGHHAEPDE MGFC +NNVAVAA + + I KI+I+DWDVHHGN
Sbjct: 163 ELKKTFAIVRPPGHHAEPDEHMGFCFFNNVAVAARVV---QQLTKIKKIMILDWDVHHGN 219
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ+ F +D VL+ S+HR+E GT+YP G GEGPGLG+++NVPW GDAD
Sbjct: 220 GTQRAFNEDNSVLYVSIHRYEQGTYYPCGPFGGMQSCGEGPGLGFSVNVPWPEAGMGDAD 279
Query: 252 YLAVWDHILLPVAKDFGPDII--------------------IISAGFDAAAGDPLGGCRV 291
YL + +++P+A +F P+++ I+SAGFDAAAGD LG C V
Sbjct: 280 YLHAFQKVVMPIAMEFAPELVISKCHFFCFNVAIAKPPTVYIVSAGFDAAAGDDLGECFV 339
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL-----EDKPVAGSSE 346
+P GY+ M L A G++V+ALEGGYNL SISNS LA +L+ E P+ S
Sbjct: 340 SPAGYAHMTHMLSGLAGGRLVVALEGGYNLDSISNSALAVARILMGQAPDELPPLVASEA 399
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTL 371
A E+ W V ++ S +W ++
Sbjct: 400 AT--ETVW----LVAREQSKYWKSV 418
>gi|443894818|dbj|GAC72165.1| histone deacetylase complex, catalytic component HDA1 [Pseudozyma
antarctica T-34]
Length = 725
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 206/340 (60%), Gaps = 3/340 (0%)
Query: 4 KSGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAK 63
+ G K R G +Y M H+ P HPE P RI I+ KLQ + Q + +
Sbjct: 80 EEASGALDKFRTGYVYSSEMMLHSNPIDPEHPERPVRIYKIFRKLQENSLLQYMKRIKIR 139
Query: 64 EAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAGSV 121
E ++ VH + + ++ + D ++++ L+S+Y+NE S+ AA L+ G
Sbjct: 140 EVTKDEVMLVHDQGIWDGVERTALYHPDIIKEQVPRLENLSSLYINEHSAFAARLSCGGA 199
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
IE+ + +A G + + FAIVRPPGHHAEPD++MGFC YNNVAVA +L + P+ I KIL
Sbjct: 200 IELCDAIASGRIRNGFAIVRPPGHHAEPDKSMGFCFYNNVAVATRYLQQKYPQT-IRKIL 258
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
I+DWDVHHGN TQ+ F D VL+ S+HR+E G FYP + G Y G GPG G ++NVP
Sbjct: 259 ILDWDVHHGNGTQRAFENDAEVLYVSLHRYEGGAFYPGSKYGNYDSAGTGPGEGKSVNVP 318
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLK 301
W GDADY+ + H+++P+A +F PD +IISAGFDAA GDP+G RVTP GY+ M
Sbjct: 319 WPTKGMGDADYMYAFHHLVMPIALEFAPDFVIISAGFDAAEGDPIGESRVTPGGYAQMTH 378
Query: 302 KLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPV 341
L GK+ + LEGGYN ++++S A V+L + V
Sbjct: 379 ALTSLCDGKVAVVLEGGYNPDAVADSAHAVTEVILARRTV 418
>gi|354544791|emb|CCE41516.1| hypothetical protein CPAR2_800680 [Candida parapsilosis]
Length = 846
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 221/384 (57%), Gaps = 21/384 (5%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV----- 59
I + GL+YD RM H Y HPE+P RI I+ KL AG+ Q +
Sbjct: 148 IPLKTGLVYDVRMRYHAKIFTSYFEYTDPHPEDPRRIYRIYKKLVEAGLVQDYSLSGIDE 207
Query: 60 -------LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSE 112
+ +EA +L VH+E H+ I++ + D A+ +SIY+N S
Sbjct: 208 LGPYMEKIPIREASADEILEVHSEEHLKHIQSTETMTKDELLKETATG-DSIYVNNDSFF 266
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG++ ++ A VRPPGHHAEPD GFCL++NVAVAA +L
Sbjct: 267 SAKLSCGGAIEACKAVVEGKVKNSLAAVRPPGHHAEPDSPGGFCLFSNVAVAAKNILKSY 326
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + KI+++DWD+HHGN TQK F+ DPRVL+ S+HR+E G FYP G +GEG
Sbjct: 327 PE-SVRKIVVLDWDIHHGNGTQKAFYDDPRVLYISLHRYENGKFYPGTKYGGAEQVGEGA 385
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+N+N+PW + D DY+ ++ +++PV ++ PD+II+S+GFDAA GD +G C V+
Sbjct: 386 GEGFNLNIPWRSHGMHDGDYVYAFNKVIIPVMLEYDPDLIIVSSGFDAADGDVIGACHVS 445
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL SISNS LA VLL + P + P
Sbjct: 446 PAGYGYMTHLLKAIARGKLAVILEGGYNLTSISNSALAVAKVLLGEPP-ENTIRMQPHGD 504
Query: 353 TWRVIQAVRKKLSAFWPTLADELP 376
V+ V K S +W L +P
Sbjct: 505 AIEVVDEVTKIQSKYWKCLKPGVP 528
>gi|350595673|ref|XP_003360363.2| PREDICTED: histone deacetylase 6-like [Sus scrofa]
Length = 1117
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/333 (45%), Positives = 210/333 (63%), Gaps = 11/333 (3%)
Query: 10 TIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
++ R GL+YD++M H +HPE P RI I +L+ G+ RC+ L A+ A D
Sbjct: 475 VLQARTGLVYDQQMMDHYNLWDSHHPEMPQRILRIMRRLEELGLAGRCLALPARPATDAE 534
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
LL+ H+ +V+ I+ + K R + +SIY+ G+ A LAAG+ + E V
Sbjct: 535 LLACHSAEYVSRIR-ATEKMRTRELHREGANYDSIYICPGTFACAQLAAGAACRLVEAVL 593
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 594 AGEVLNGIAVVRPPGHHAERDSACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 647
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ +F +DP VL+ S+HR++ GTF+P D+G + IG+ G G+ +NV W
Sbjct: 648 DVHHGNGTQHLFEEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWNGP 707
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GD +YLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P Y+ + LM
Sbjct: 708 RVGDPEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPECYAHLTHLLMG 767
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
A G+I+L LEGGYNL SIS S+ AC LL D
Sbjct: 768 LANGRIILILEGGYNLISISESMAACTRSLLGD 800
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 205/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLMQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VA+AA + + + ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVALAARYAQQKH---DVQRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL S++ V A ++ LL D P S + + L FW L
Sbjct: 382 LEGGYNLRSLAEGVSASLHTLLGDPCPLLEFPGAPCPSAQASLSCALEALEPFWEVL 438
>gi|384496447|gb|EIE86938.1| hypothetical protein RO3G_11649 [Rhizopus delemar RA 99-880]
Length = 686
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 207/344 (60%), Gaps = 23/344 (6%)
Query: 12 KRRV---GLLYDERMCKHNTPDG-DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKD 67
KRR+ G +YD M H TPD D HPE+P RI I+ L+ G+ C + +++A
Sbjct: 311 KRRLLKTGFVYDTSMSYHATPDPIDIHPEDPRRIFMIYTTLEKHGLLAECKRIKSRKATK 370
Query: 68 KNLLSVHTENHVNLIKNISSKQFDSRRDRIASK--LNSIYLNEGSSEAAYLAAGSVIEVA 125
+ + ++H ++ R I + +SIYLN S E+ AAGS+I +
Sbjct: 371 EEITAIH--------------KYSKRSQYIELEHIYDSIYLNASSFESGLYAAGSLIALL 416
Query: 126 ERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
E + + E+ +AFAI+RPPGHHAE D MGFCL+NNVA+A + + L + K LIVDW
Sbjct: 417 EALVKDEIRNAFAIIRPPGHHAEHDSPMGFCLFNNVAIAVNHCMKN---LAVKKTLIVDW 473
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+H GN TQ +F ++P VL+ S+HR++ FYPA+ G G G G G +N+PW G
Sbjct: 474 DIHFGNGTQNIFSENPNVLYISLHRYDDKMFYPADRKGAAEYTGHGKGEGTTVNIPWPCG 533
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
DADY + +++P+A +F PD++++SAGFDAA GDP+G C+VTP GY+ M L
Sbjct: 534 GMTDADYFYAFKEVVIPIAMEFDPDLLVVSAGFDAAIGDPIGQCKVTPAGYAHMTHMLKS 593
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP 349
GK+ +ALEGGYNL SI+ S L CMNVLL D P A + P
Sbjct: 594 INNGKLAIALEGGYNLNSIALSALGCMNVLLGDSPPAIENALVP 637
>gi|260942271|ref|XP_002615434.1| hypothetical protein CLUG_04316 [Clavispora lusitaniae ATCC 42720]
gi|238850724|gb|EEQ40188.1| hypothetical protein CLUG_04316 [Clavispora lusitaniae ATCC 42720]
Length = 534
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 212/376 (56%), Gaps = 21/376 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVVLNA----- 62
+ GL+YD RM H Y HPE+P RI I+ KL AG+ Q + A
Sbjct: 139 KTGLVYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKKLAEAGLIQDSTLAGADELGP 198
Query: 63 -------KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+EA + +L VHTE H+ I D K +SIY+N S +A
Sbjct: 199 LICKIPIREATAEEILQVHTEKHLQFIAATEDMTRAQLLDET-EKGDSIYVNNDSFLSAK 257
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G IE + V EG + +A AIVRPPGHHAEPD GFCL++NVAVAA +L PE
Sbjct: 258 LSCGGAIEACKAVVEGHVKNAMAIVRPPGHHAEPDAPGGFCLFSNVAVAAKNMLRAYPE- 316
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +I IVDWD+HHGN TQ+ F+ DPRVL+ S+HR+E G FYP G G G G G
Sbjct: 317 SVRRIAIVDWDIHHGNGTQRAFYDDPRVLYVSLHRYENGRFYPGTKFGGADQTGSGKGAG 376
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+++N+PW + GDADY+ + ++LPV +F PD++I+SAGFDAAAGD +G C VTP G
Sbjct: 377 FSLNIPWPSAGVGDADYVYAFRRVVLPVLCEFDPDLVIVSAGFDAAAGDLIGQCHVTPAG 436
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
Y M L A+GK+ + LEGGYNL SIS S + VL+ + P A P
Sbjct: 437 YGHMTHMLKGVARGKLAVVLEGGYNLESISASAVGVAKVLVGEPPEE-PVRALPRADVIE 495
Query: 356 VIQAVRKKLSAFWPTL 371
I AV + + FW +
Sbjct: 496 TIGAVVRAHAPFWQCM 511
>gi|195478214|ref|XP_002100445.1| GE16165 [Drosophila yakuba]
gi|194187969|gb|EDX01553.1| GE16165 [Drosophila yakuba]
Length = 1261
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 828 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 887
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L SVHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 888 LQSVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 944
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 945 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 1004
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 1005 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1060
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 1061 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1120
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1121 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1180
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1181 ERPPCQNAINTLQKTIAIQQTHWPCV 1206
>gi|194895597|ref|XP_001978293.1| GG19512 [Drosophila erecta]
gi|190649942|gb|EDV47220.1| GG19512 [Drosophila erecta]
Length = 1256
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 823 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 882
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L SVHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 883 LQSVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 939
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 940 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 999
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 1000 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1055
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 1056 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1115
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1116 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1175
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1176 ERPPCQNAINTLQKTIAIQQTHWPCV 1201
>gi|392593606|gb|EIW82931.1| histone deacetylase clr3 [Coniophora puteana RWD-64-598 SS2]
Length = 670
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 212/354 (59%), Gaps = 19/354 (5%)
Query: 15 VGLLYDERMCKHNT----PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
VG ++ M H + P+ HPE P RI++++ +Q AG+ + + + AK+ +
Sbjct: 43 VGYVFSHEMMLHRSFHGNPEAYGHPEAPERIQSVYAAIQRAGLFESMKYIPIRAAKEHEV 102
Query: 71 LSVHTEN---HVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAER 127
L VH+ V +N++ ++ S S+Y+ E ++ AA L+ G VIE +
Sbjct: 103 LLVHSAGLWAKVRAFENMTRQEISDSESYYDSL--SLYVMEQTTRAALLSCGGVIEASLA 160
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
VA GEL +FAIVRPPGHHAEPDE MGFC +NNVAVAA + P I +ILI+DWDV
Sbjct: 161 VARGELKKSFAIVRPPGHHAEPDEHMGFCFFNNVAVAARVVQQLTP---IRRILILDWDV 217
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ+ F DP VL+ S+HR+E GTFYP G GEG GLGY++N+PW
Sbjct: 218 HHGNGTQRAFNDDPSVLYISLHRYEKGTFYPCGPFGSMESCGEGDGLGYSVNIPWPRKGM 277
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
DADY+ + I++P+ +F P+++IISAGFDAA GD LG C VTP GY+ M L A
Sbjct: 278 VDADYIHAFQQIVMPICVEFAPELVIISAGFDAADGDDLGECHVTPAGYAHMTHMLSGLA 337
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLL-----EDKPVAGSSEAYPFESTWRV 356
GK+V+ALEGGYNL SIS S LA VL E P+ S Y E+ W V
Sbjct: 338 GGKVVVALEGGYNLDSISKSALAVARVLTGEAPPELPPLVASE--YGTETVWMV 389
>gi|395854526|ref|XP_003799739.1| PREDICTED: histone deacetylase 6 [Otolemur garnettii]
Length = 1236
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/395 (40%), Positives = 231/395 (58%), Gaps = 20/395 (5%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+RM H ++HPE P RI I +L+ G RC+ L + A + L
Sbjct: 514 LQARTGLIYDQRMLNHCNLWDNHHPEVPQRILRIMCRLEELGFAGRCLTLPVRPATNAEL 573
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
++ H+ +V ++ ++++ +R R +S +SIY+ + A LAAG+ + E V
Sbjct: 574 ITCHSAEYVGHLR--ATEKMKTRELYRESSNFDSIYICPSTFACAQLAAGAACRLVEAVL 631
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 632 SGEVLNGVAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGRALRILIVDW 685
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
D+HHGN TQ MF DP VL+ S+HR++ GTF+P ++G + IG G G+ +NV W
Sbjct: 686 DIHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGNEGASSQIGRAEGAGFTVNVAWNGP 745
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
R GDADYLA W ++LP+A +F P+++++SAGFDAA GDPLGG +V+P GY+ + LM
Sbjct: 746 RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAALGDPLGGYQVSPEGYAHLTHLLMG 805
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLS 365
A G+I+L LEGGYNL SIS S+ AC LL D P + P I +
Sbjct: 806 LANGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLALSRPPLSGALTSITETIQAHR 865
Query: 366 AFWPTLA-------DELPTKLTSLKAPPAHMISSS 393
+W +L + L + +++ K P IS S
Sbjct: 866 RYWRSLQGMKVEDKEGLYSSMSATKKAPQPAISGS 900
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 214/359 (59%), Gaps = 8/359 (2%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 123 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 182
Query: 75 TENHVNLIKNISSKQFDSRRDR--IASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+ +++L++ + Q+ + R+ +A +S+YL+ S A LA+GSV+ + + V E
Sbjct: 183 SLEYIDLME---TTQYMNERELHLLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAE 239
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + AIVRPPGHHA+ G+C++N+VA+AA + + GI ++LIVDWDVHHG
Sbjct: 240 IRNGMAIVRPPGHHAQHSLMDGYCMFNHVALAARYAQQKH---GIQRVLIVDWDVHHGQG 296
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY
Sbjct: 297 TQFIFNQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGEGQGYTINVPWNQVGMRDADY 356
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + HILLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++
Sbjct: 357 IAAFLHILLPVAFEFQPQLVLVAAGFDALRGDPKGEMAATPAGFAQLTHLLMGLAGGKLI 416
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
L+LEGGYNL S++ V A ++ LL D S P S + V + L FW L
Sbjct: 417 LSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCRSAKASLSCVLEALQPFWEIL 475
>gi|405123003|gb|AFR97768.1| histone deacetylase clr3 [Cryptococcus neoformans var. grubii H99]
Length = 731
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/373 (44%), Positives = 223/373 (59%), Gaps = 22/373 (5%)
Query: 14 RVGLLYDERMCKH----------NTPD-GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
R G +YD M H N D D HPE+P RIK I+ +L G+ +R L+
Sbjct: 50 RTGYIYDPLMMLHCMEGYMPTAENVMDNSDGHPEDPMRIKRIFTRLAEQGLIRRMKRLDF 109
Query: 63 KEAKDKNLLSVHTE---NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAG 119
+E K +L VH E + V + +S +Q + ++ S+Y+ ++ A L+AG
Sbjct: 110 EEVKFDQVLLVHGEEMWDKVQATELLSDQQIQAMKEYYDQL--SLYVCRETAHCARLSAG 167
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
VI+ V + E+ +AFAIVRPPGHHAEP+E MGFC +NNVAVA + +R L K
Sbjct: 168 GVIQACRSVCKNEVRNAFAIVRPPGHHAEPNEHMGFCFFNNVAVATREM--QREGLA-KK 224
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
+LI+DWDVHHGN TQ+ FW D VL+ S+HRHE GTFYP +D G M+G+G G+G ++N
Sbjct: 225 VLILDWDVHHGNGTQRAFWHDGDVLYMSLHRHEGGTFYPNSDFGSLNMVGDGEGVGKSVN 284
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+PW GDADY+ + I++P+A +F PD++IISAGFDAA GD LG C VTP Y M
Sbjct: 285 IPWPGPGFGDADYIYAFQRIIMPIAYEFNPDLVIISAGFDAADGDLLGQCHVTPAAYGHM 344
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL-EDKPVAGSSEAYPFESTWRVIQ 358
L A GK+V+ALEGGYNL +IS+S LA VLL E P G A E+ V+
Sbjct: 345 THMLSSLAGGKLVVALEGGYNLRAISDSALAVARVLLGEIPPELGIMRAS--EAATEVVY 402
Query: 359 AVRKKLSAFWPTL 371
V + S +W +
Sbjct: 403 QVALEQSKYWKCI 415
>gi|409044909|gb|EKM54390.1| hypothetical protein PHACADRAFT_196818 [Phanerochaete carnosa
HHB-10118-sp]
Length = 669
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 212/330 (64%), Gaps = 12/330 (3%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VG +YD RM H+ G HPE P RIK I++ + AG+ + + +EA+ +L VH
Sbjct: 42 VGYVYDSRMMGHSCISG--HPEQPERIKRIFDAFRDAGLISKMRKIPIREAERDEVLMVH 99
Query: 75 TE---NHVNLIKNISSKQF-DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
+E + V + ++S++ DS + + S+Y++ + EAA L+ G VIEVA +
Sbjct: 100 SETLWDKVMAVGDMSTQDIVDSEQ---YYQDLSLYVSPSTPEAARLSCGGVIEVAMAIVR 156
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G++ AFAIVRPPGHH+EPDE MGFC +NNVAVA ++ P KI+I+DWDVHHG
Sbjct: 157 GDVEKAFAIVRPPGHHSEPDEHMGFCFFNNVAVAIK-VIQMWP--AFKKIMILDWDVHHG 213
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQK F+ DP VL+ S+HR+E G FYP G G+GPGLG ++N+PW GDA
Sbjct: 214 NGTQKAFYDDPDVLYVSLHRYENGQFYPNGPFGSLKSCGDGPGLGCSVNIPWPTKGMGDA 273
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY+ + I++P+A +F PD++IISAGFDAA GD LG C VTP GY+ M L A+GK
Sbjct: 274 DYIYAFQRIVMPIAMEFAPDLVIISAGFDAAKGDDLGECEVTPAGYAHMTHMLAGLARGK 333
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKP 340
+++ALEGGY L +IS+S A VL+ + P
Sbjct: 334 MLVALEGGYCLDAISSSATAVAKVLVGEAP 363
>gi|386764357|ref|NP_001245651.1| HDAC4, isoform F [Drosophila melanogaster]
gi|383293369|gb|AFH07365.1| HDAC4, isoform F [Drosophila melanogaster]
Length = 1242
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 809 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 868
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 869 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 925
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 926 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 985
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 986 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1041
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 1042 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1101
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1102 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1161
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1162 ERPPCQNAINTLQKTIAIQQTHWPCV 1187
>gi|195448415|ref|XP_002071647.1| GK25029 [Drosophila willistoni]
gi|194167732|gb|EDW82633.1| GK25029 [Drosophila willistoni]
Length = 1322
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/386 (40%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 889 KITTGLAYDPLMLKHSCICGDNSLHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 948
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ S L++ ++ NE ++ A
Sbjct: 949 LQTVHTEAHAMLF---GSNQCQLSRPKLESALSASFVRLSCGGLGVDLDTTWNEHHTATA 1005
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 1006 ARMAAGCVIDLAFKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRLP 1065
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 1066 E--VKRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGAGAG 1121
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+AK F PDII++S+GFDAA G PLGG
Sbjct: 1122 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIAKYFNPDIILVSSGFDAATGHPAPLGG 1181
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1182 YHVSPACFGYMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKTEL 1241
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1242 ERPPCQNAINTLQRTIAIQQTHWPCV 1267
>gi|340718184|ref|XP_003397551.1| PREDICTED: histone deacetylase 6-like [Bombus terrestris]
Length = 1160
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 241/416 (57%), Gaps = 19/416 (4%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V ++YD+RM KH D HPE P+RI I+ K Q + RC V + A + L+ V
Sbjct: 533 KVCIVYDDRMLKHCDMFNDNHPEKPHRINIIYKKYQEYNLLDRCYVQQGRSATREELILV 592
Query: 74 HTENHVNLIK---NISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
H++ +++ IK N+ K+ + A NS+YL+ + +A ++ GS+++V + V
Sbjct: 593 HSKEYIDSIKDTENLKPKELKKQ----AETYNSVYLHPETWTSACISTGSLLQVVDSVLN 648
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
GE S AIVRPPGHHA + A GFC++NN+A+AA + + + ++LIVDWDVHHG
Sbjct: 649 GESQSGIAIVRPPGHHAGENIACGFCIFNNIAIAAKYAVEFH---HVKRVLIVDWDVHHG 705
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ +F +DP+VL+ SVHR++ G F+P + Y+ +G G G+ +N+PW GDA
Sbjct: 706 NGTQSIFEEDPKVLYISVHRYDNGNFFPNSKRANYSYVGSLSGEGFTVNIPWNKKGMGDA 765
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
+Y+A + I++P+A F P+++++SAGFDA GDPLGGC VTP Y + L A G+
Sbjct: 766 EYIAAFQQIIMPIAYQFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWLSSLANGR 825
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWP 369
I+L+LEGGYN+ SI++++ C LL D P+ + + P S I V K +W
Sbjct: 826 IILSLEGGYNINSIAHAMAICTKSLLGDPLPILENGQT-PCASAIHTINNVIKTQKQYWT 884
Query: 370 TLADELPT-KLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSKLKVDDGHAE 424
L L K L P I +++ +V E +L+ + SK+ +++ E
Sbjct: 885 HLVFNLSLPKERVLPKPKVPHIKTNE------RVINSEKILKHSESKIALEEIETE 934
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 199/327 (60%), Gaps = 3/327 (0%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
++ G+++D M +H +PE P R+ + + + G+ RC ++ ++A + +L
Sbjct: 103 RKETGIVFDRSMAEHKCLWDPSYPECPARLTRVIQRCEELGLINRCKLVTPRQASEDEIL 162
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H++ ++++K + ++S ++IY++ + + + LA GS I + E + +
Sbjct: 163 MKHSQEQIDILKATDECTDVDSLELLSSTYDAIYIHPSTYQLSLLAVGSTINLVESICKE 222
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
E+ + AI+RPPGHHA E G+C +NNVA+AA +L+ +KILIVDWD+HHG
Sbjct: 223 EIQNGMAIIRPPGHHAMKSEYCGYCFFNNVAIAAEKVLSSNLA---SKILIVDWDIHHGQ 279
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
+TQ+MF+ DPRV++FS+HR+E G F+P + + +G+G G GYN NVP +AD
Sbjct: 280 ATQQMFYNDPRVIYFSIHRYENGEFWPNLRESNFHFVGDGLGEGYNFNVPLNKTGMTNAD 339
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA++ +LLP+A +F PD+II+SAG+DAA G P G +TP Y+ +L L+ A GK+
Sbjct: 340 YLAIFQQVLLPMAYEFQPDLIIVSAGYDAALGCPEGEMLLTPACYAHLLSSLLSLAAGKV 399
Query: 312 VLALEGGYNLGSISNSVLACMNVLLED 338
+ LEGGY L S++ S + LL D
Sbjct: 400 AVILEGGYCLKSLAESAALTLRTLLGD 426
>gi|320583009|gb|EFW97225.1| Putative catalytic subunit of a class II histone deacetylase
complex [Ogataea parapolymorpha DL-1]
Length = 716
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/378 (42%), Positives = 218/378 (57%), Gaps = 25/378 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ GL YD RM H Y HPE+P RI I+ L G I
Sbjct: 43 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGRDQIGD 102
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEA 113
V + +EA + +L VHT H+ I+ S Q ++ + +A K +S+Y N S +
Sbjct: 103 LMVKIPVREASAEEILLVHTPEHLRFIE---STQQMTKEELMAHTEKGDSVYFNNDSLLS 159
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A L+ G IE + V EG + +A A+VRPPGHHAEPD GFCL++NVAVAA +L P
Sbjct: 160 AKLSCGGAIEACKAVVEGRVKNALAVVRPPGHHAEPDAPGGFCLFSNVAVAAKSILASYP 219
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +I+IVDWDVHHGN TQK F+ DPRVL+ S+HR+E G +YP G +G G G
Sbjct: 220 E-SVRRIVIVDWDVHHGNGTQKAFFDDPRVLYISLHRYEHGKYYPGTKAGGADQVGSGAG 278
Query: 234 LGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTP 293
G+N+N+PW G GDADY+ ++ +++PV +F PD++IIS+GFDAA GD +GGC V+P
Sbjct: 279 EGFNVNIPWPVGGVGDADYIYAFNRVIMPVCHEFAPDLVIISSGFDAADGDIIGGCHVSP 338
Query: 294 YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST 353
GY M L A+G + + LEGGYNL +I++S L VLL + P S E T
Sbjct: 339 AGYGHMTHALKSLAKGNLCVVLEGGYNLDAIASSALRVAKVLLGEPPEELKSVQLKTE-T 397
Query: 354 WRVIQAVRKKLSAFWPTL 371
VI V K S +W TL
Sbjct: 398 IEVIDDVIKIQSQYWKTL 415
>gi|405970377|gb|EKC35286.1| Histone deacetylase 6 [Crassostrea gigas]
Length = 887
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/377 (40%), Positives = 216/377 (57%), Gaps = 24/377 (6%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+YDERM KH D+HPENP RI + + G+ RCV L A+ + + +L H
Sbjct: 96 TGLIYDERMLKHKNLWDDHHPENPARISGPFKRCCELGLIDRCVRLEAQYSTEDMILLQH 155
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
++ + +K+ + + R A K +SIYLN S E A L+ GS +E+ E++ + ++
Sbjct: 156 SQMLIETLKHTTEMNLEELRAE-AIKYDSIYLNNSSYECALLSLGSTVELMEQILKRKVR 214
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA +E GFC +NNVA+AA L L + KILI+DWDVHHG TQ
Sbjct: 215 NGMAIIRPPGHHAMTEEFNGFCFFNNVAIAAKHALEN---LKLKKILIIDWDVHHGQGTQ 271
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+MF+ DPRVL+FS+HR+EFG F+P + Y IGEG G+GYNINVP D DYLA
Sbjct: 272 QMFYNDPRVLYFSIHRYEFGKFWPNLRESDYDFIGEGKGVGYNINVPLNQIGMADHDYLA 331
Query: 255 VWDHILLPVAKDFG--------------------PDIIIISAGFDAAAGDPLGGCRVTPY 294
++ IL+P+A +F P+++I+SAG+D+A GDP G VTP
Sbjct: 332 IFHQILMPIASEFDPELVLISAGYDCAIGCPEFEPELVIVSAGYDSAIGDPKGQMGVTPA 391
Query: 295 GYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTW 354
++ + K+M AQG++ + LEGGY L S++ S + LL D P +S
Sbjct: 392 AFAHLTHKVMSLAQGRVAVILEGGYCLKSLTESAAMTLRTLLGDPCPRIPPSQEPCDSVT 451
Query: 355 RVIQAVRKKLSAFWPTL 371
I +V K L W L
Sbjct: 452 ESILSVIKVLRPHWKCL 468
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 184/336 (54%), Gaps = 53/336 (15%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K R + YDE M H T YHPE P+RI I++K G+ QRC + + A + L
Sbjct: 540 KHRTCIAYDEGMRAHYTSSSYYHPEAPDRITRIFDKHTEWGLTQRCTRVETRMATEAELA 599
Query: 72 SVHTENHVNLIKNISSKQ-FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
+H+ ++N IK++ K F+ + ++ K SIYL S A +AAG V++V + V
Sbjct: 600 LIHSTTYLNEIKSLEDKNPFELK--KLERKFQSIYLCRDSYFCARMAAGFVLDVVDNVMT 657
Query: 131 GE-----------------------------LNSAFA-IVRPPGHHAEPDEAMGFCLYNN 160
+ L F I RPPGHHAE EAMGFC +NN
Sbjct: 658 EQHPVLMYVSPANQSYLLGHFRHPDNWFPIPLTKIFEWISRPPGHHAECTEAMGFCFFNN 717
Query: 161 VAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAN 220
+A+AA + N + + K+LIVDWD+HHGN TQ+ F+ DP VLF S+HR++ G FYP++
Sbjct: 718 IAIAAKYAQN---KYNVKKVLIVDWDIHHGNGTQRQFYDDPSVLFISLHRYDRGFFYPSS 774
Query: 221 DDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDA 280
G TM G GD++Y+A + I++P+A +FGP+++++SAGFDA
Sbjct: 775 PQGCQTM-----------------GPMGDSEYIAAFQQIVMPIAYEFGPELVLVSAGFDA 817
Query: 281 AAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALE 316
A GDPLG VTP GY M L A G+++LALE
Sbjct: 818 ALGDPLGNYLVTPLGYGHMTHMLSSLANGRVILALE 853
>gi|442616198|ref|NP_001259509.1| HDAC4, isoform I [Drosophila melanogaster]
gi|442616200|ref|NP_001259510.1| HDAC4, isoform J [Drosophila melanogaster]
gi|440216728|gb|AGB95351.1| HDAC4, isoform I [Drosophila melanogaster]
gi|440216729|gb|AGB95352.1| HDAC4, isoform J [Drosophila melanogaster]
Length = 1205
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 772 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 831
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 832 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 888
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 889 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 948
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 949 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1004
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 1005 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1064
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1065 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1124
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1125 ERPPCQNAINTLQKTIAIQQTHWPCV 1150
>gi|23194387|gb|AAN15143.1| histone deacetylase dHDAC4 isoform b [Drosophila melanogaster]
Length = 1255
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 822 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 881
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 882 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 938
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 939 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 998
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 999 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1054
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 1055 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1114
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1115 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1174
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1175 ERPPCQNAINTLQKTIAIQQTHWPCV 1200
>gi|281360799|ref|NP_572868.3| HDAC4, isoform D [Drosophila melanogaster]
gi|272506083|gb|AAF48245.3| HDAC4, isoform D [Drosophila melanogaster]
gi|383873390|gb|AFH55501.1| FI19806p1 [Drosophila melanogaster]
Length = 1252
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 819 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 878
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 879 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 935
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 936 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 995
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 996 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1051
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 1052 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1111
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1112 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1171
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1172 ERPPCQNAINTLQKTIAIQQTHWPCV 1197
>gi|448508263|ref|XP_003865908.1| Hda1 hypothetical proteinistone deacetylase [Candida orthopsilosis
Co 90-125]
gi|380350246|emb|CCG20467.1| Hda1 hypothetical proteinistone deacetylase [Candida orthopsilosis
Co 90-125]
Length = 838
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 221/384 (57%), Gaps = 21/384 (5%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV----- 59
I + GL+YD RM H Y HPE+P RI I+ KL AG+ Q +
Sbjct: 140 IPLKTGLVYDVRMRYHAKIFTSYFEYTDPHPEDPRRIYRIYKKLVEAGLVQDYSLSGIDE 199
Query: 60 -------LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSE 112
+ +EA +L VH+E H+ I++ + D A+ +SIY+N S
Sbjct: 200 LGPYMQKIPIREALADEILEVHSEEHLKHIQSTETMTKDELLKETANG-DSIYVNNDSFF 258
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + ++ A VRPPGHHAEPD GFCL++NVAVAA +L
Sbjct: 259 SAKLSCGGAIEACKAVVEGRVKNSLAAVRPPGHHAEPDSPGGFCLFSNVAVAAKNILKSY 318
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + +I+++DWD+HHGN TQK F+ DPRVL+ S+HR+E G FYP G +GEG
Sbjct: 319 PE-SVRRIVVLDWDIHHGNGTQKAFYDDPRVLYISLHRYENGKFYPGTKYGGADQVGEGA 377
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+N+N+PW + D DY+ ++ +++PV ++ PD+II+S+GFDAA GD +G C V+
Sbjct: 378 GEGFNLNIPWRSHGMHDGDYVYAFNKVIIPVMLEYDPDLIIVSSGFDAADGDVIGACHVS 437
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P GY M L A+GK+ + LEGGYNL SISNS LA VLL + P + + P
Sbjct: 438 PAGYGYMTHLLKAIARGKLAVILEGGYNLTSISNSALAVAKVLLGEPP-ENTIKKQPHGD 496
Query: 353 TWRVIQAVRKKLSAFWPTLADELP 376
VI V K S +W L +P
Sbjct: 497 AIEVIDEVTKIQSKYWKCLKAGVP 520
>gi|442616194|ref|NP_001259507.1| HDAC4, isoform G [Drosophila melanogaster]
gi|440216726|gb|AGB95349.1| HDAC4, isoform G [Drosophila melanogaster]
Length = 1269
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 836 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 895
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 896 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 952
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 953 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 1012
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 1013 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1068
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 1069 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1128
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1129 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1188
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1189 ERPPCQNAINTLQKTIAIQQTHWPCV 1214
>gi|24641720|ref|NP_727682.1| HDAC4, isoform B [Drosophila melanogaster]
gi|442616196|ref|NP_001259508.1| HDAC4, isoform H [Drosophila melanogaster]
gi|22832177|gb|AAN09318.1| HDAC4, isoform B [Drosophila melanogaster]
gi|440216727|gb|AGB95350.1| HDAC4, isoform H [Drosophila melanogaster]
Length = 1181
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 748 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 807
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 808 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 864
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 865 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 924
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 925 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 980
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 981 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1040
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1041 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1100
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1101 ERPPCQNAINTLQKTIAIQQTHWPCV 1126
>gi|390338172|ref|XP_003724721.1| PREDICTED: histone deacetylase 6-like [Strongylocentrotus
purpuratus]
Length = 1144
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 216/356 (60%), Gaps = 6/356 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYH--PENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD+R +H P G H E P R+ A KLQA G+ RC ++A+ A D+ +LS
Sbjct: 100 TGLVYDDRFKEHYCPIGSEHGKSECPERLTACMEKLQAGGLVDRCTRVSARPASDEEILS 159
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+H++ +++ +K + D ++ +A +S++L S E A LA G ++E+ E+V +GE
Sbjct: 160 LHSQEYLDTLKRSGTLSPDELKE-LAQSYDSVFLCNESFEIARLAVGGLLELTEKVVKGE 218
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
L + FA +RP GHH++ D A G+ L NN+A+ A R +L + +ILIVDWDVHHG
Sbjct: 219 LRNGFAFIRPCGHHSQRDIANGYSLVNNIALTAKI---ARTKLNVERILIVDWDVHHGQG 275
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q + DP +++FS+HR+E +F+P + Y IGEG G GYN+NVPW GDA+Y
Sbjct: 276 IQYLTQDDPSIMYFSMHRYENTSFWPHLEASNYDHIGEGAGKGYNVNVPWNKIGMGDAEY 335
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
L V+ +LLP+A +F P ++++SAGFDAA GDP G ++P G++ M LM AQGK+V
Sbjct: 336 LTVFRQLLLPLAYEFNPQLVLVSAGFDAAEGDPKGEMCISPDGFAHMTHHLMGLAQGKVV 395
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
L LEGGY+L ++ S C LL D P S Y ++ I V K L +W
Sbjct: 396 LGLEGGYSLEALGKSAAMCTRTLLGDSPNPLSQIKYVSDNALETIHNVTKALKPYW 451
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/500 (34%), Positives = 254/500 (50%), Gaps = 37/500 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R G +YDERM H T D HPE P RI I++K Q G+ RC+ L +EA + L +
Sbjct: 511 RTGFVYDERMKLHRTFD---HPERPERIARIYSKHQEHGLIDRCIKLETREATAEELETC 567
Query: 74 HTENHVNLIKNIS----------SKQFDSRR-------DRIASKLNSI--YLNEGSSEAA 114
H + + IK S +F+S R + S L+ I ++ + + +A
Sbjct: 568 HLADMIGDIKETSKHTARELIDIQDKFNSTRYSRDIYVHPVMSYLSHILLFVPQDTYLSA 627
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
+AAG + + + V ++ +A IVRPPGHHA+ A GFC +NNVA+A+ + N+
Sbjct: 628 SVAAGCTLNLVDAVLSNQVLNAVGIVRPPGHHADSKLASGFCFFNNVAIASKYAQNK--- 684
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
G+ ++LIVDWDVHHGN TQ++F DP VL+ S+HRHE G ++P +G +G+G G
Sbjct: 685 YGVKRVLIVDWDVHHGNGTQRLFESDPSVLYISLHRHENGMYFPMGPEGAVDQVGKGDGQ 744
Query: 235 GYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRV 291
GYN+N+ W G GDA+YLA + HI++P+A F P+++ ISAGFDAA GDPLG C V
Sbjct: 745 GYNVNIGWNTGNKGLMGDAEYLAAFHHIIMPLAYQFNPELVFISAGFDAAKGDPLGNCLV 804
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFE 351
+P GY M L A G+++ LEGGYNL SI+ S+ C ++L D P S P
Sbjct: 805 SPEGYGHMTHMLSSIAGGRVITVLEGGYNLNSIAVSMAMCTRIMLGD-PCPDLSPGIPSS 863
Query: 352 STWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQV 411
+ I K FW ++ D++ T + +D+ D+ + A
Sbjct: 864 CGMQAIYDAAKAHEKFWSSMKDQVGFLETMIFKEDESSTEDNDTIQTDSTSSSNAAPRDA 923
Query: 412 ALSKLKVDDGHAELGMATPWRS--------ELSKVDVFYASFGSNMWKSRFLCYIEGGQV 463
S+ V + E+ S E D+ G N+ + R GG
Sbjct: 924 VTSEPSVPERVDEVSSTKAEASSAAGDGDGEDGLKDILEGMSGMNLQQPREASVTTGGAG 983
Query: 464 EGMQKPCSGSKDRNPPKEIL 483
G ++ ++D P E L
Sbjct: 984 AGAKEDAVQTQDDVPEDEAL 1003
>gi|23194385|gb|AAN15142.1| histone deacetylase dHDAC4 isoform a [Drosophila melanogaster]
Length = 1203
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 770 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 829
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 830 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 886
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 887 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 946
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 947 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1002
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 1003 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1062
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1063 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1122
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1123 ERPPCQNAINTLQKTIAIQQTHWPCV 1148
>gi|281360801|ref|NP_001014736.2| HDAC4, isoform E [Drosophila melanogaster]
gi|272506084|gb|AAX52490.2| HDAC4, isoform E [Drosophila melanogaster]
Length = 1203
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 770 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 829
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 830 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 886
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 887 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 946
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 947 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1002
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 1003 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1062
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1063 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1122
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1123 ERPPCQNAINTLQKTIAIQQTHWPCV 1148
>gi|443906771|gb|AGD79326.1| RE18386p1 [Drosophila melanogaster]
Length = 1181
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 748 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 807
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 808 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 864
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 865 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 924
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 925 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 980
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 981 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1040
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1041 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1100
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1101 ERPPCQNAINTLQKTIAIQQTHWPCV 1126
>gi|296422385|ref|XP_002840741.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636964|emb|CAZ84932.1| unnamed protein product [Tuber melanosporum]
Length = 441
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 206/340 (60%), Gaps = 18/340 (5%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI--------------PQRCVVL 60
GL YD RM H +G+ HPE+P RI I+ K+ G+ P V +
Sbjct: 3 TGLCYDRRMTSHRIIEGE-HPEDPKRISVIYEKIVNCGLVNDPEFSGTSNPENPGLMVRI 61
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
A+EA ++ + +H+ + + + D + + ++ +S+Y N+ + + L+ G
Sbjct: 62 EAREATEREIGLIHSRDQFEFARELEDHD-DEQLIMMTNEADSVYFNQHTFMCSKLSCGG 120
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
IE RVA+G + +A A+VRPPGHHA PD +MGFC++NNV V+A L P+ I KI
Sbjct: 121 AIETCLRVAQGHVKNAIAVVRPPGHHATPDCSMGFCIFNNVCVSAKTLQERMPD--IKKI 178
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
LI+DWD+HHGN TQ F+ DP VL+ S+HR E GTFYP + G T G G G G+N+N+
Sbjct: 179 LILDWDIHHGNGTQDAFYNDPSVLYISLHRFERGTFYPNDPRGDSTFCGSGQGTGFNVNI 238
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
PW G D DY+ + +++P+A ++ PD +I+SAGFDAAAGD LG C +TP G++ M
Sbjct: 239 PWTEGGKLDGDYIYAFQKLVMPIALEYNPDFVIVSAGFDAAAGDELGECYITPAGFAHMT 298
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
LM A+GK+ + LEGGYNL SIS+S LA + VL+ P
Sbjct: 299 YMLMSLAKGKMAVCLEGGYNLSSISDSALAVIKVLMGQAP 338
>gi|390601936|gb|EIN11329.1| histone deacetylase clr3 [Punctularia strigosozonata HHB-11173 SS5]
Length = 687
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/361 (43%), Positives = 216/361 (59%), Gaps = 7/361 (1%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
R + +G ++D RM H+ DG HPE P RI +I+ L G ++ + + K +
Sbjct: 34 RLPRHSIGYVFDARMMAHSCLDG--HPEQPERIVSIYRLLAENGCLEKMKHIPIRMVKKQ 91
Query: 69 NLLSVHTENHVNLIKNISS-KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAER 127
L VH+E + + IS + D + +L S+Y+N + AA L+ G VIE
Sbjct: 92 EALLVHSEELWDKVLAISRLRAQDIEDTKRYYELMSLYVNPHTPSAARLSCGGVIEATLA 151
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
VA GE+ +FAIVRPPGHHAEP+E MGFC +NNVAVA + I K+LI+DWD+
Sbjct: 152 VARGEVRKSFAIVRPPGHHAEPEEHMGFCFFNNVAVAVRV---AQQLTKIRKVLILDWDI 208
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQK F DP VL+ S+HR++ G FYP+ G GEGPG+G+++N+PW
Sbjct: 209 HHGNGTQKAFNDDPDVLYISLHRYDAGQFYPSTTFGAMNSCGEGPGIGFSVNIPWPGPGM 268
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
DADYL + I++P+A +F P+++IISAGFDAA GD LG C VTP GY+ M L A
Sbjct: 269 RDADYLHAFQKIVMPIAIEFAPELVIISAGFDAADGDELGECHVTPTGYAHMTHMLSSLA 328
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAF 367
GK+V+ALEGGYNL SI+NS LA V+L + P + T V Q R++ S +
Sbjct: 329 GGKLVVALEGGYNLQSIANSSLAVAKVILGEAPPQIAPMVASELGTETVWQVARQQ-SKW 387
Query: 368 W 368
W
Sbjct: 388 W 388
>gi|157816406|gb|ABV82197.1| GH08881p [Drosophila melanogaster]
Length = 1151
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 718 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 777
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 778 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 834
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 835 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 894
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 895 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 950
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 951 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1010
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1011 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1070
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1071 ERPPCQNAINTLQKTIAIQQTHWPCV 1096
>gi|427778695|gb|JAA54799.1| Putative hdac6 [Rhipicephalus pulchellus]
Length = 587
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/361 (39%), Positives = 222/361 (61%), Gaps = 11/361 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R L+YDERM KH D HPE P RI W ++ G+ C++L+++ A LL V
Sbjct: 83 RTALVYDERMAKHRCLDERGHPERPERILKPWQVMEKRGLLNLCILLDSRSATVDELLMV 142
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H + +V ++ + ++ ++ K S+YL + +A LAAGS++++ + V +
Sbjct: 143 HDKKYVQKMRGCQEMK-NADLIKLQEKYPSVYLCRDTFSSALLAAGSLLQLVDAVCTNKC 201
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ A++RPPGHHAE EA GFC++NNVA+AA + G+ +ILI+DWDVHHGN T
Sbjct: 202 QNGMALIRPPGHHAERGEAGGFCIFNNVAIAARHAIET---YGLQRILILDWDVHHGNGT 258
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F+ DPRVL+ S+HR++ G+F+P + + +GEG G G+NINV W + D DYL
Sbjct: 259 QHAFYDDPRVLYLSIHRYDNGSFFPCLPEADFGAVGEGAGQGFNINVAWNSEGMSDGDYL 318
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ ++LPVA + P+++++S+GFD+ GDPLG CRVT Y+ + L+ A+G+++L
Sbjct: 319 TAFFQLVLPVAYAYNPELVLVSSGFDSCVGDPLGYCRVTAEAYAHLTHLLLPLARGRVIL 378
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKL---SAFWPT 370
LEGGYNL + ++V C++ LL +P + A P S +Q++R+ L S++WP
Sbjct: 379 TLEGGYNLSKLPSAVCHCVSALLGLRPPQLRTAA-PCPSA---VQSIRRTLGAHSSYWPC 434
Query: 371 L 371
L
Sbjct: 435 L 435
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 23 MCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENH 78
M KH D HPE P RI W ++ G+ C++L+++ A LL V H
Sbjct: 1 MAKHRCLDERGHPERPERILKPWQVMEKRGLLNLCILLDSRSATVDELLMVXXXEH 56
>gi|157129659|ref|XP_001655442.1| histone deacetylase [Aedes aegypti]
gi|108882043|gb|EAT46268.1| AAEL002528-PA [Aedes aegypti]
Length = 1112
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/382 (40%), Positives = 235/382 (61%), Gaps = 27/382 (7%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL +D M KH GD HPE+ R+++IW +L G+ RC L +++A +
Sbjct: 675 KPTTGLAFDSLMLKHTCVCGDNAAHPEHSGRLQSIWARLMETGLAARCDKLRSRKATQEE 734
Query: 70 LLSVHTENHVNLI--KNISSKQFDSRR--------DRIASKLNSIYLNEGSSEAAYLAAG 119
L SVH+E H L I+ ++ D+ + L++ + ++ AA +AAG
Sbjct: 735 LQSVHSEAHSLLFGTNQINRQKVDASGVSFVRLGCGGVGVDLDTTWNEHHTAAAARMAAG 794
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
VI++ + A+GE+ + FA+VRPPGHHAEP+ AMGFC +N++A+AA LL +R I +
Sbjct: 795 CVIDLCYKAAKGEIRNGFAVVRPPGHHAEPNAAMGFCFFNSIAIAAK-LLRQRLSSEIQR 853
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
+L+VDWDVHHGN TQ++F+ DP VL+ S+HRH+ G F+P G T G GPGLG+N+N
Sbjct: 854 VLVVDWDVHHGNGTQQVFYDDPSVLYLSIHRHDDGNFFPGT--GGPTECGAGPGLGFNVN 911
Query: 240 VPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPY 294
+ W G GDA+YLA + I++P+A+DF PDI+++SAGFDAA G PLGG V+P
Sbjct: 912 IAWSGGLNPPLGDAEYLAAFRTIVMPIARDFQPDIVLVSAGFDAAFGHPAPLGGYMVSPA 971
Query: 295 GYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSSEAYPFES 352
+ + ++LM A GK++LALEGGY+L +I +S C+ LL D P+A + + P
Sbjct: 972 CFGYLTRELMKLADGKVILALEGGYDLAAICDSAQECVRALLGDDLAPIAATELSRPPCQ 1031
Query: 353 TWRVIQAVRKKLS---AFWPTL 371
T ++ ++K ++ WP +
Sbjct: 1032 T--AVETLQKTIAIQMTHWPCV 1051
>gi|302768945|ref|XP_002967892.1| hypothetical protein SELMODRAFT_169296 [Selaginella moellendorffii]
gi|300164630|gb|EFJ31239.1| hypothetical protein SELMODRAFT_169296 [Selaginella moellendorffii]
Length = 545
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 221/378 (58%), Gaps = 19/378 (5%)
Query: 9 RTIKRRVGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEA 65
R RR + YD+RM H + HPE P+R+++I AAG+ P C+++ A+E
Sbjct: 137 RLSVRRTAIGYDDRMLLHAEFQMKSNPHPERPDRLRSILAGFTAAGLYPGGCILIPAREI 196
Query: 66 KDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEV 124
L +VHT HV +++ SS + +S S Y N S+ AA LAAG ++
Sbjct: 197 TRVELETVHTHEHVEVVEATSSLE--------SSYFTSDTYANGHSALAARLAAGVCADL 248
Query: 125 AERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVD 184
A + G++++ FA+VRPPGHHAE MGFCL+NN +AA K+LIVD
Sbjct: 249 ASAILSGQVDNGFALVRPPGHHAEGATVMGFCLHNNACIAAKASQAAG----AKKVLIVD 304
Query: 185 WDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN 244
WDVHHGN TQ++F DP VL+ S+HRHE G FYP + G +G GPG G++IN+PW
Sbjct: 305 WDVHHGNGTQEIFEHDPSVLYISLHRHEGGLFYPGS--GAAHEVGSGPGEGFSINIPWPC 362
Query: 245 GRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM 304
GD DY+ + HI+LP+AK F PDI I+SAGFDAA GDPLGGC+VTP G++ M + L
Sbjct: 363 SGIGDNDYIVAFQHIVLPIAKQFAPDITIVSAGFDAARGDPLGGCQVTPAGFAQMTQLLS 422
Query: 305 DFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVA-GSSEAYPFESTWRVIQAVRKK 363
+ GK+++ LEGGYNL SIS S A + VL + P + E P E+ W + V
Sbjct: 423 TVSGGKLLVVLEGGYNLRSISASATAVLRVLCGEAPESLDDEELLPSEAGWATVLEVYAV 482
Query: 364 LSAFWPTLADELPTKLTS 381
S +W L K TS
Sbjct: 483 QSRYWSALCLPAFMKFTS 500
>gi|48958438|gb|AAT47772.1| GH10588p [Drosophila melanogaster]
Length = 611
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 230/386 (59%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 178 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 237
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 238 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 294
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 295 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 354
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 355 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 410
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 411 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 470
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 471 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 530
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 531 ERPPCQNAINTLQKTIAIQQTHWPCV 556
>gi|410899128|ref|XP_003963049.1| PREDICTED: histone deacetylase 7-like [Takifugu rubripes]
Length = 895
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/390 (40%), Positives = 243/390 (62%), Gaps = 33/390 (8%)
Query: 10 TIKRR--VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
+IK R GL+YD +M KH GD HPE+ RI++IW++LQ G+ +C + ++A
Sbjct: 458 SIKPRFTTGLVYDSQMLKHQCTCGDNSSHPEHAGRIQSIWSRLQERGLRGQCESIRGRKA 517
Query: 66 KDKNLLSVHTENHVNL--IKNISSKQFDSRR------DRIASKL---------NSIYLNE 108
+ L SVHTE HV L ++ + D+R+ R+ L ++I+
Sbjct: 518 TLEELQSVHTERHVLLYGTNPLNRLKLDNRKLAGILSQRMFVMLPCGGVGVDNDTIWNES 577
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL 168
+S A+ +AAGSV+E+A RVA+GEL + FA+VRPPGHHA+P MGFC +N+VA+AA L
Sbjct: 578 HTSTASRMAAGSVVELAFRVAKGELKNGFAVVRPPGHHADPSNPMGFCYFNSVAIAAKQL 637
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
+ +L ++KILIVDWDVHHGN TQ++F+ DP VL+ S+HR++ G F+P + G +
Sbjct: 638 QH---KLSVSKILIVDWDVHHGNGTQEVFYSDPSVLYISLHRYDDGNFFPGS--GSPAEV 692
Query: 229 GEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD- 284
G G G G+N+N+ W G GDA+YLA + +++P+A++F PD++++SAGFDAA G+
Sbjct: 693 GSGAGEGFNVNISWTGGLDPPMGDAEYLAAFRSVVMPIAQEFSPDVVLVSAGFDAAEGNP 752
Query: 285 -PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPV 341
PLGG +V+ +S + +LM A G++VL LEGG++L +I ++ AC++ LL +D
Sbjct: 753 APLGGYKVSAKCFSFLTHQLMSLAGGRVVLVLEGGHDLTAICDASEACVSTLLGIQDPLA 812
Query: 342 AGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
P + +Q V K S +W ++
Sbjct: 813 EEVLLKKPNANAVHSLQTVIKIQSQYWQSV 842
>gi|198470256|ref|XP_001355273.2| GA14617 [Drosophila pseudoobscura pseudoobscura]
gi|198145365|gb|EAL32330.2| GA14617 [Drosophila pseudoobscura pseudoobscura]
Length = 1295
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/384 (40%), Positives = 229/384 (59%), Gaps = 33/384 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 862 KITTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 921
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L + ++ NE ++ A
Sbjct: 922 LQTVHTEAHAMLF---GSNQCQLTRPKLETTLAASFVRLSCGGLGVDLDTTWNEHHTATA 978
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L + P
Sbjct: 979 ARMAAGCVIDLAFKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKRLRQQMP 1038
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E+ +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 1039 EM--RRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1094
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+AK F PDI+++S+GFDAA G PLGG
Sbjct: 1095 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIAKGFNPDIVLVSSGFDAATGHPAPLGG 1154
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P++ S
Sbjct: 1155 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPISQSEL 1214
Query: 346 EAYPFESTWRVIQAVRKKLSAFWP 369
E P ++ +Q WP
Sbjct: 1215 ERPPCQNAINTLQKTIAIQQTHWP 1238
>gi|302761220|ref|XP_002964032.1| hypothetical protein SELMODRAFT_166606 [Selaginella moellendorffii]
gi|300167761|gb|EFJ34365.1| hypothetical protein SELMODRAFT_166606 [Selaginella moellendorffii]
Length = 545
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 221/378 (58%), Gaps = 19/378 (5%)
Query: 9 RTIKRRVGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEA 65
R RR + YD+RM H + HPE P+R+++I AAG+ P C+++ A+E
Sbjct: 137 RLSVRRTAIGYDDRMLLHAEFQMKSNPHPERPDRLRSILAGFTAAGLYPGGCILIPAREI 196
Query: 66 KDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEV 124
L +VHT HV +++ SS + +S S Y N S+ AA LAAG ++
Sbjct: 197 TRVELETVHTHEHVEVVEATSSLE--------SSYFTSDTYANGHSALAARLAAGVCADL 248
Query: 125 AERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVD 184
A + G++++ FA+VRPPGHHAE MGFCL+NN +AA K+LIVD
Sbjct: 249 ASAILSGQVDNGFALVRPPGHHAEGATVMGFCLHNNACIAAKASQAAG----AKKVLIVD 304
Query: 185 WDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN 244
WDVHHGN TQ++F DP VL+ S+HRHE G FYP + G +G GPG G++IN+PW
Sbjct: 305 WDVHHGNGTQEIFEHDPSVLYISLHRHEGGLFYPGS--GAAHEVGSGPGEGFSINIPWPC 362
Query: 245 GRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM 304
GD DY+ + HI+LP+AK F PDI I+SAGFDAA GDPLGGC+VTP G++ M + L
Sbjct: 363 SGIGDNDYIVAFQHIVLPIAKQFAPDITIVSAGFDAARGDPLGGCQVTPAGFAQMTQLLS 422
Query: 305 DFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVA-GSSEAYPFESTWRVIQAVRKK 363
+ GK+++ LEGGYNL SIS S A + VL + P + E P E+ W + V
Sbjct: 423 TVSGGKLLVVLEGGYNLRSISASATAVLRVLCGEAPESLDDEELLPSEAGWATVLEVYAV 482
Query: 364 LSAFWPTLADELPTKLTS 381
S +W L K TS
Sbjct: 483 QSRYWSALCLPAFMKFTS 500
>gi|345482186|ref|XP_001605910.2| PREDICTED: histone deacetylase 4-like [Nasonia vitripennis]
Length = 961
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 226/379 (59%), Gaps = 27/379 (7%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL YD M KH G+ HPE+ R++++W +L G+ QRC + +++A + + +
Sbjct: 528 TGLAYDPLMLKHACACGEMRSHPEHGGRLQSVWARLSETGLLQRCDRVRSRKATLEEIQT 587
Query: 73 VHTENHVNLIKN--ISSKQFDSRRDR----------IASKLNSIYLNEGSSEAAYLAAGS 120
HTE H L ++ + D + + I ++ + + ++ AA +A G
Sbjct: 588 CHTEAHALLFGTNPLTRHKLDMSKMQPSFVRLSCGGIGVDSDTTWNDIHTAPAARMAVGC 647
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
VIE+A + A G++ + FA+VRPPGHHAE + AMGFC +N VA+AA LL + L + KI
Sbjct: 648 VIELAFKAAMGDIKNGFAVVRPPGHHAEANLAMGFCFFNAVAIAAKLLLQK---LDLRKI 704
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
LI+DWDVHHGN TQ+MF+ DPRVL+ S+HRH+ G F+P G T G G G+G N+NV
Sbjct: 705 LILDWDVHHGNGTQQMFYDDPRVLYLSIHRHDDGNFFPGT--GGPTECGAGEGMGRNVNV 762
Query: 241 PWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYG 295
W G GDA+YLA + I++P+AKDF PD++++SAGFDAA G PLGG +V+P
Sbjct: 763 AWSGGLNPPIGDAEYLAAFRTIVMPIAKDFDPDLVLVSAGFDAAHGHPAPLGGYKVSPAC 822
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
+ M + LM A GK+VLALEGGY+L +I +S C+ LL D+P E
Sbjct: 823 FGRMTQMLMTLAGGKVVLALEGGYDLTAICDSAQECVRALLGDEPTPIRDEELTRAPCQN 882
Query: 356 VIQAVRKKLS---AFWPTL 371
I ++K ++ + WP +
Sbjct: 883 AIDTLQKTIAIQMSHWPCV 901
>gi|348523309|ref|XP_003449166.1| PREDICTED: histone deacetylase 7-like [Oreochromis niloticus]
Length = 962
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/386 (40%), Positives = 240/386 (62%), Gaps = 43/386 (11%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD +M KH GD HPE+ RI++IW++LQ G+ +C + ++A + L S
Sbjct: 532 TGLVYDSQMLKHQCTCGDNSSHPEHAGRIQSIWSRLQERGLKGQCESIRGRKATLEELQS 591
Query: 73 VHTENHVNL--IKNISSKQFDSRR------DRIASKL---------NSIYLNEGSSEAAY 115
VHTE HV L ++ + D+R+ R+ L ++I+ +S A+
Sbjct: 592 VHTERHVLLYGTNPLNRLKLDNRKLAGILSQRMFVMLPCGGVGVDNDTIWNESHTSTASR 651
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
LAAGSV+E+A RVA+GEL + FA+VRPPGHHA+P MGFC +N+VA+AA L + +L
Sbjct: 652 LAAGSVVELAFRVAKGELKNGFAVVRPPGHHADPSNPMGFCYFNSVAIAAKQLQH---KL 708
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
++KILIVDWDVHHGN T+++F+ DP VL+ S+HR++ G F+P + G +G G G G
Sbjct: 709 SVSKILIVDWDVHHGNGTEEVFYNDPSVLYISLHRYDDGNFFPGS--GSPAEVGSGAGEG 766
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GDA+YLA + +++P+A++F PD++++SAGFDAA G+ PLGG +
Sbjct: 767 FNVNVAWTGGLDPPMGDAEYLAAFRSVVMPIAQEFSPDVVLVSAGFDAAEGNPAPLGGYK 826
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPF 350
V+ + + ++LM A G++VLALEGG++L +I ++ AC++ LL G E P
Sbjct: 827 VSAKCFGFLTRQLMSLAGGRLVLALEGGHDLTAICDASEACVSSLL------GIQEPLPE 880
Query: 351 E--------STWRVIQAVRKKLSAFW 368
+ + R +Q V + S +W
Sbjct: 881 DVLLQKPNANAVRSLQTVIQIQSQYW 906
>gi|321253099|ref|XP_003192629.1| histone deacetylase clr3 [Cryptococcus gattii WM276]
gi|317459098|gb|ADV20842.1| histone deacetylase clr3, putative [Cryptococcus gattii WM276]
Length = 734
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 222/373 (59%), Gaps = 22/373 (5%)
Query: 14 RVGLLYDERMCKH----------NTPD-GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
R G +YD M H N D GD HPE+P RIK I+ +L G+ +R L+
Sbjct: 48 RTGYIYDPLMMLHCMEGYMPTAENVMDNGDGHPEDPMRIKRIFTRLAEQGLIRRMKRLDF 107
Query: 63 KEAKDKNLLSVHTE---NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAG 119
+E + +L VH E + V + ++ +Q ++ S+Y+ ++ A L+AG
Sbjct: 108 EEVTFEQVLLVHGEEMWDKVQATELLTDQQIQDTKEYYDQL--SLYVCRETAHCARLSAG 165
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
VI+ V + E+ +AFAIVRPPGHHAEP+E MGFC +NNVAVA + +R L K
Sbjct: 166 GVIQTCRSVCKNEVRNAFAIVRPPGHHAEPNEHMGFCFFNNVAVATREM--QREGLA-KK 222
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
+LI+DWDVHHGN TQ+ FW D VL+ S+HRHE GTFYP D G M+G+G G+G ++N
Sbjct: 223 VLILDWDVHHGNGTQRAFWHDGDVLYMSLHRHEGGTFYPNGDFGSLNMVGDGEGVGKSVN 282
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+PW GDADY+ + I++P+A +F PD++IISAGFDAA GD LG C VTP Y M
Sbjct: 283 IPWPGPGFGDADYIYAFQRIIMPIAYEFNPDLVIISAGFDAADGDMLGQCHVTPAAYGHM 342
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL-EDKPVAGSSEAYPFESTWRVIQ 358
L A GK+V+ALEGGYNL +IS+S LA VLL E P G A ++ V+
Sbjct: 343 THMLSSLAGGKLVVALEGGYNLRAISDSALAVARVLLGEIPPELGILRAS--QAATEVVY 400
Query: 359 AVRKKLSAFWPTL 371
V + S +W +
Sbjct: 401 QVALEQSKYWECI 413
>gi|307180954|gb|EFN68742.1| Histone deacetylase 4 [Camponotus floridanus]
Length = 1084
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 165/437 (37%), Positives = 253/437 (57%), Gaps = 59/437 (13%)
Query: 15 VGLLYDERMCKHNTPDGDY---HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
GL YD M KH G+ HPE+ R++++W +L G+ QRC + +++A + +
Sbjct: 646 TGLAYDPLMLKHACVCGETVRGHPEHGGRLQSVWARLSETGLLQRCDRVRSRKASLEEIQ 705
Query: 72 SVHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL-------------------NE-G 109
+ H+E H L ++ ++ D SKL+ + + NE
Sbjct: 706 TCHSEAHALLFGTNPLNRQKLD------MSKLSQLPIKSFVRLPCGGVGVDSDTTWNELN 759
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
++ AA +A G V+E+A + A G++ + FA+VRPPGHHAE ++AMGFC +N+VA+A L
Sbjct: 760 TAPAARMAVGCVVELAFKTALGDIKNGFAVVRPPGHHAETNQAMGFCFFNSVAIATRLL- 818
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + KILI+DWDVHHGN TQ+MF+ DPRVL+ S+HRH+ G F+P G T G
Sbjct: 819 --QQKLDVRKILILDWDVHHGNGTQQMFYDDPRVLYLSIHRHDDGNFFPGT--GGPTECG 874
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G GLGYN+NV W G GDA+YLA + I++P+AK++ PD++I+SAGFDAA G
Sbjct: 875 AGEGLGYNVNVAWSGGLNPPMGDAEYLAAFRTIVMPIAKEYDPDLVIVSAGFDAAVGHPA 934
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG +V+P + M ++L++ A GK+VLALEGGY+L +I +S C+ LL D+P
Sbjct: 935 PLGGYKVSPACFGKMTQQLLNLADGKVVLALEGGYDLAAICDSAQECVRALLGDEPSPLR 994
Query: 345 SEAYPFESTWRVIQAVRKKLS---AFWPTLADELPTKLTSLKAPPAHMISSS---DSEDE 398
E I ++K ++ + WP + KLT AH ++ S S+ E
Sbjct: 995 DEELARIPCQNAIDTLQKTIAIQMSHWPCV------KLT------AHTVAMSAIEASQKE 1042
Query: 399 DTKVETLEAVLQVALSK 415
+ ET+ A+ +++ +
Sbjct: 1043 HDETETVSAMASLSMQQ 1059
>gi|326475552|gb|EGD99561.1| histone deacetylase HdaA [Trichophyton tonsurans CBS 112818]
Length = 794
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 224/394 (56%), Gaps = 30/394 (7%)
Query: 6 GEGRTIKRR---VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-------- 52
G R + R G YD RM H P D HPE+P R+ I+ +L AG
Sbjct: 137 GRSRALHRAQLPTGYCYDNRMRYHCEVKPTLDVHPEDPRRVYYIYRELGRAGLIADGGEF 196
Query: 53 ----IPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE 108
+PQ + A++A + ++ VHT+ H +K+ D + + +SIY N
Sbjct: 197 QGPLVPQPLKRIEARDATEAEIMLVHTKEHYEFVKSTKDMSEDELLE-LEHTRDSIYFNS 255
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA--- 165
+ +A L+ G IE + VAE + +A A++RPPGHHAE ++ MGFCL+NNV+VAA
Sbjct: 256 LTFTSALLSCGGAIETCKAVAEERVKNAIAVIRPPGHHAESNKTMGFCLFNNVSVAARAC 315
Query: 166 SFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFY 225
+L ++ KI+I+DWDVHHGN Q+MF+ DP VL+ S+H + G+FYP D+G +
Sbjct: 316 QHVLGDK----CRKIMILDWDVHHGNGVQRMFYNDPNVLYISIHVYRDGSFYPGGDEGNW 371
Query: 226 TMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP 285
GEG GLG N+N+PW GD DYL + +++P+ +F PD++IISAGFDAAAGD
Sbjct: 372 DYCGEGLGLGKNVNIPWPTQGMGDGDYLYAFQEVVMPIGYEFDPDLVIISAGFDAAAGDE 431
Query: 286 LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP--VAG 343
LGGC VTP YS M + LM+ A GK+ + LEGGYN SIS S LA L+ + P +
Sbjct: 432 LGGCFVTPPCYSHMTRMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEPPDRLTA 491
Query: 344 SSEAYPFESTWRVIQAVRKKLSAFWPTLADELPT 377
S + P T R + + S +W + + P+
Sbjct: 492 PSASRPAVETVREVAMMH---SRYWKCMYPKGPS 522
>gi|327301305|ref|XP_003235345.1| histone deacetylase [Trichophyton rubrum CBS 118892]
gi|326462697|gb|EGD88150.1| histone deacetylase [Trichophyton rubrum CBS 118892]
Length = 794
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 224/394 (56%), Gaps = 30/394 (7%)
Query: 6 GEGRTIKRR---VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-------- 52
G R + R G YD RM H P D HPE+P R+ I+ +L AG
Sbjct: 137 GRSRALHRAQLPTGYCYDNRMRYHCEVKPTLDVHPEDPRRVYYIYRELGRAGLIADGGEF 196
Query: 53 ----IPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE 108
+PQ + A++A + ++ VHT+ H +K+ D + + +SIY N
Sbjct: 197 QGPLVPQPLKRIEARDATEAEIMLVHTKEHYEFVKSTKDMSEDELLE-LEHTRDSIYFNS 255
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA--- 165
+ +A L+ G IE + VAE + +A A++RPPGHHAE ++ MGFCL+NNV+VAA
Sbjct: 256 LTFTSALLSCGGAIETCKAVAEERVKNAIAVIRPPGHHAESNKTMGFCLFNNVSVAARAC 315
Query: 166 SFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFY 225
+L ++ KI+I+DWDVHHGN Q+MF+ DP VL+ S+H + G+FYP D+G +
Sbjct: 316 QHVLGDK----CRKIMILDWDVHHGNGVQRMFYNDPNVLYISIHVYRDGSFYPGGDEGNW 371
Query: 226 TMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP 285
GEG GLG N+N+PW GD DYL + +++P+ +F PD++IISAGFDAAAGD
Sbjct: 372 DYCGEGLGLGKNVNIPWPTQGMGDGDYLYAFQEVVMPIGYEFDPDLVIISAGFDAAAGDE 431
Query: 286 LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP--VAG 343
LGGC VTP YS M + LM+ A GK+ + LEGGYN SIS S LA L+ + P +
Sbjct: 432 LGGCFVTPPCYSHMTRMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEPPDRLIA 491
Query: 344 SSEAYPFESTWRVIQAVRKKLSAFWPTLADELPT 377
S + P T R + + S +W + + P+
Sbjct: 492 PSASRPAVETVREVAMMH---SRYWKCMYPKGPS 522
>gi|195044067|ref|XP_001991747.1| GH11896 [Drosophila grimshawi]
gi|193901505|gb|EDW00372.1| GH11896 [Drosophila grimshawi]
Length = 1312
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 228/384 (59%), Gaps = 33/384 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 879 KITTGLAYDPLMLKHACICGDNASHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 938
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ S L++ ++ NE ++ A
Sbjct: 939 LQTVHTEAHSMLF---GSNQGQLTRPKLESTLSASFVRLACGGLGVDLDTTWNEHHTATA 995
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 996 ARMAAGCVIDLAFKTARGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRVP 1055
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
++ +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 1056 DM--KRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGAGAG 1111
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
+GYN+N+ W N GDA+Y+A + +++P+AK F PDI+++S+GFDAA G PLGG
Sbjct: 1112 IGYNVNISWSGALNPPLGDAEYIAAFRTVVMPIAKCFNPDIVLVSSGFDAATGHPAPLGG 1171
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVA-GSS 345
V+P + +M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A G
Sbjct: 1172 YHVSPACFGLMTRELLQLANGKVVLALEGGYDLTAICDSAQECVRALLGDPAAPIAQGEL 1231
Query: 346 EAYPFESTWRVIQAVRKKLSAFWP 369
E P ++ +Q WP
Sbjct: 1232 ERPPCQNAINTLQKTIAIQQTHWP 1255
>gi|326483151|gb|EGE07161.1| histone deacetylase hda1 [Trichophyton equinum CBS 127.97]
Length = 796
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 224/394 (56%), Gaps = 30/394 (7%)
Query: 6 GEGRTIKRR---VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-------- 52
G R + R G YD RM H P D HPE+P R+ I+ +L AG
Sbjct: 137 GRSRALHRAQLPTGYCYDNRMRYHCEVKPTLDVHPEDPRRVYYIYRELGRAGLIADGGEF 196
Query: 53 ----IPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE 108
+PQ + A++A + ++ VHT+ H +K+ D + + +SIY N
Sbjct: 197 QGPLVPQPLKRIEARDATEAEIMLVHTKEHYEFVKSTKDMSEDELLE-LEHTRDSIYFNS 255
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA--- 165
+ +A L+ G IE + VAE + +A A++RPPGHHAE ++ MGFCL+NNV+VAA
Sbjct: 256 LTFTSALLSCGGAIETCKAVAEERVKNAIAVIRPPGHHAENNKTMGFCLFNNVSVAARAC 315
Query: 166 SFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFY 225
+L ++ KI+I+DWDVHHGN Q+MF+ DP VL+ S+H + G+FYP D+G +
Sbjct: 316 QHVLGDK----CRKIMILDWDVHHGNGVQRMFYNDPNVLYISIHVYRDGSFYPGGDEGNW 371
Query: 226 TMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP 285
GEG GLG N+N+PW GD DYL + +++P+ +F PD++IISAGFDAAAGD
Sbjct: 372 DYCGEGLGLGKNVNIPWPTQGMGDGDYLYAFQEVVMPIGYEFDPDLVIISAGFDAAAGDE 431
Query: 286 LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP--VAG 343
LGGC VTP YS M + LM+ A GK+ + LEGGYN SIS S LA L+ + P +
Sbjct: 432 LGGCFVTPPCYSHMTRMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEPPDRLTA 491
Query: 344 SSEAYPFESTWRVIQAVRKKLSAFWPTLADELPT 377
S + P T R + + S +W + + P+
Sbjct: 492 PSASRPAVETVREVAMMH---SRYWKCMYPKGPS 522
>gi|328791286|ref|XP_391882.3| PREDICTED: histone deacetylase 4 [Apis mellifera]
Length = 1094
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 161/434 (37%), Positives = 247/434 (56%), Gaps = 53/434 (12%)
Query: 15 VGLLYDERMCKHNTPDGDY---HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
GL YD M KH G+ HPE+ R++++W +L G+ QRC + +++A + +
Sbjct: 656 TGLAYDPLMLKHACVCGETVRGHPEHGGRLQSVWARLSETGLLQRCDRIRSRKATLEEIQ 715
Query: 72 SVHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL-------------------NE-G 109
+ H+E H L ++ ++ D SKL+ + + NE
Sbjct: 716 TCHSEAHALLFGTNPMNRQKLD------VSKLSQLPIKSFVRLPCGGVGVDSDTTWNELN 769
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
++ AA +A G V+++A + A G++ + FA+VRPPGHHAE ++AMGFC +N++A+AA L
Sbjct: 770 TAPAARMAVGCVVDLAFKTAMGDIKNGFAVVRPPGHHAETNQAMGFCFFNSIAIAARLL- 828
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L I KILI+DWDVHHGN TQ+MF+ DPRVL+ S+HRH+ G F+P G T G
Sbjct: 829 --QQKLDIRKILILDWDVHHGNGTQQMFYDDPRVLYLSIHRHDEGNFFPGT--GGPTECG 884
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G GLGYN+NV W G GDA+YLA + I++P+AK F P I+++SAGFDAA G
Sbjct: 885 AGEGLGYNVNVAWSGGLNPPMGDAEYLAAFRSIVMPIAKAFDPSIVLVSAGFDAAIGHPA 944
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG +V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D+P
Sbjct: 945 PLGGYKVSPACFGKMTQQLLGLANGKVVLALEGGYDLAAICDSAQECVRALLGDEPTQLR 1004
Query: 345 SEAYPFESTWRVIQAVRKKLS---AFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E + ++K ++ + WP + L A A M + + E +
Sbjct: 1005 EEELTRAPCQNAVDTLQKTIAVQMSHWPCV---------KLNAHTASMSAIEAGQKERDE 1055
Query: 402 VETLEAVLQVALSK 415
ET+ A+ +++ +
Sbjct: 1056 TETVSAMASLSMQQ 1069
>gi|315049039|ref|XP_003173894.1| histone deacetylase clr3 [Arthroderma gypseum CBS 118893]
gi|311341861|gb|EFR01064.1| histone deacetylase clr3 [Arthroderma gypseum CBS 118893]
Length = 796
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 224/394 (56%), Gaps = 30/394 (7%)
Query: 6 GEGRTIKRR---VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-------- 52
G R + R G YD RM H P D HPE+P R+ I+ +L AG
Sbjct: 138 GRSRALHRAQLPTGYCYDNRMRYHCEVKPTLDVHPEDPRRVYYIYRELGRAGLIADGGEF 197
Query: 53 ----IPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE 108
+PQ + A++A + + VHT+ H +K+ D + + +SIY N
Sbjct: 198 QGPLVPQPLKRIEARDATEAEITLVHTKEHYEFVKSTKDMSEDELLE-LEHTRDSIYFNS 256
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA--- 165
+ +A L+ G IE + VAE ++ +A A++RPPGHHAE ++ MGFCL+NNV+VAA
Sbjct: 257 LTFTSALLSCGGAIETCKAVAEEKVKNAIAVIRPPGHHAESNKTMGFCLFNNVSVAARAC 316
Query: 166 SFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFY 225
+L ++ KILI+DWDVHHGN Q+MF+ DP VL+ S+H + G+FYP D+G +
Sbjct: 317 QHVLGDK----CRKILILDWDVHHGNGVQRMFYNDPNVLYISIHVYRDGSFYPGGDEGNW 372
Query: 226 TMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP 285
GEG GLG N+N+PW GD DYL + +++P+ +F PD++IISAGFDAAAGD
Sbjct: 373 DYCGEGLGLGKNVNIPWPTQGMGDGDYLYAFQEVVMPIGYEFDPDLVIISAGFDAAAGDE 432
Query: 286 LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP--VAG 343
LGGC VTP YS M + LM+ A GK+ + LEGGYN SIS S LA L+ + P +
Sbjct: 433 LGGCFVTPPCYSHMTRMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEPPDRLIA 492
Query: 344 SSEAYPFESTWRVIQAVRKKLSAFWPTLADELPT 377
S + P T R + + S +W + + P+
Sbjct: 493 PSASRPAVETVREVAMMH---SRYWKCMYPKGPS 523
>gi|195432308|ref|XP_002064165.1| GK20022 [Drosophila willistoni]
gi|194160250|gb|EDW75151.1| GK20022 [Drosophila willistoni]
Length = 1136
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 158/411 (38%), Positives = 237/411 (57%), Gaps = 24/411 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV Y+E M +H HPE P RIK I + + R + L + A +
Sbjct: 548 RVCYAYEEEMLQHCNLHDVGHPEQPMRIKHIHQMHKEYELLTRMMPLMPRAATTDEVCLA 607
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT +HVN I+ + + + ++ + + NS+YL+ + + A LAAGSV++ + V GE
Sbjct: 608 HTRSHVNSIRRLLGRSPEELQE-LGAGFNSVYLHPRTFDCATLAAGSVLQAVDCVLRGET 666
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAEPD+ GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 667 RSGICNVRPPGHHAEPDQPHGFCIFNNVAIAAQYAIRD---FGLQRVLIVDWDVHHGNGT 723
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ SVHR+E G+F+P DG Y ++G+ G G+N+N+PW GD +Y
Sbjct: 724 QHIFEANPKVLYISVHRYEHGSFFPKGPDGNYDVVGKQAGRGFNVNIPWNKKGMGDMEYA 783
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VTP GY + L A GKI++
Sbjct: 784 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGLFTHWLSALAGGKIIV 843
Query: 314 ALEGGYNLGSISNSVLACMNVLLED-KPVA----GSSEA-----YPFESTWRVIQAVRKK 363
LEGGYN+ SIS ++ C LL D P GS +A F+S +Q+ +
Sbjct: 844 CLEGGYNVNSISYAMTMCTKSLLGDPMPTPQFNNGSGDARKPPTVAFQSCLETLQSCLEV 903
Query: 364 LSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALS 414
W ++ D + +L PA S++ +ED TL+ Q++LS
Sbjct: 904 QRHHWKSV-DFVNRRL------PAGQGVVSENNNEDFLAATLQ---QLSLS 944
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 191/324 (58%), Gaps = 3/324 (0%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L++DE M +H H E P R + + Q + RC+ + ++ A + +L +H
Sbjct: 115 TALIFDETMSQHCCLWDKLHWERPERFTRVLERCQELKLVDRCLRIKSRSATKEEILKLH 174
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
T H ++ S + D + ++S +SIY++ + E + LA+GS IE+ +++ G+
Sbjct: 175 TAEHYEQLELTSGIRDDENMEELSSHFDSIYIHPSTFELSLLASGSTIELVDQLIMGKAQ 234
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA E G+C +NNVA+AA L++ + +ILI+D+DVHHG TQ
Sbjct: 235 NGMAIIRPPGHHAMKAEFNGYCFFNNVALAAKHALDKH---KLQRILIIDYDVHHGQGTQ 291
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+ F+ DPRVL+FS+HR E+G+F+P + + IG G G GYN NVP + DYLA
Sbjct: 292 RFFYDDPRVLYFSIHRFEYGSFWPNLHESDFHAIGTGAGQGYNFNVPLNATGMTNGDYLA 351
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
++ +L+PVA +F P++I++SAG+DAA G P G VTP Y +L L+ A ++ +
Sbjct: 352 IFQQLLMPVALEFQPELILVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLASCRVAVV 411
Query: 315 LEGGYNLGSISNSVLACMNVLLED 338
LEGGY L S++ + LL D
Sbjct: 412 LEGGYCLESLAEGAALSLRSLLGD 435
>gi|430811311|emb|CCJ31234.1| unnamed protein product [Pneumocystis jirovecii]
Length = 730
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 224/388 (57%), Gaps = 26/388 (6%)
Query: 3 VKSGEGRTIKRRVGLLYDERMCKHNTPDG-DYHPENPNRIKAIWNKLQAAGIPQ----RC 57
VK + + GL YD RM H T + D+HPE+P RI I+ ++ AG+ + C
Sbjct: 96 VKEKHKYKFRLKTGLCYDVRMRFHATINPIDFHPEDPRRIYRIYKEIADAGLIEYYKWTC 155
Query: 58 V---------VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE 108
++A+E + L VHTENH + + S S NS+Y N
Sbjct: 156 SGSNKDEIMHRISARELTREEALLVHTENHWDTLLQTEGMSL-SELMYFESIHNSVYFNN 214
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL 168
S+ A L+AG IE VAE ++ +A AIVRPPGHHAE D AMGFCL++NVA+AA +
Sbjct: 215 ESAFCARLSAGGTIETCVAVAEEKVRNAIAIVRPPGHHAESDCAMGFCLFSNVAIAAKCI 274
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
+ I +ILI+DWDVHHGN TQ++F+ D VL+ S+HR+E G FYP G Y +
Sbjct: 275 FQKFS--NIQRILILDWDVHHGNGTQRVFYDDDSVLYISLHRYEDGRFYPGTKYGNYDKV 332
Query: 229 GEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGG 288
G G GLG +N+PW GD+DY+ + ++LP+A ++ P+++IIS+GFDAA GD +G
Sbjct: 333 GSGKGLGKTVNIPWPCKGMGDSDYIYAFQKVVLPIAYEYNPNMVIISSGFDAAIGDEIGE 392
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP----VAGS 344
C VTP GY+ M + LM AQGK+V LEGGYNL SIS S LA L+ + P + +
Sbjct: 393 CFVTPVGYAHMTQMLMGLAQGKLVAVLEGGYNLDSISRSALAVTKTLIGEPPPELKITKA 452
Query: 345 SEAYPFESTWRVIQAVRKKLSAFWPTLA 372
S+A + IQ V + S +W +
Sbjct: 453 SDA-----CIQTIQKVISEHSKYWNCMT 475
>gi|380018600|ref|XP_003693215.1| PREDICTED: histone deacetylase 4-like [Apis florea]
Length = 1095
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 247/434 (56%), Gaps = 53/434 (12%)
Query: 15 VGLLYDERMCKHNTPDGDY---HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
GL YD M KH G+ HPE+ R++++W +L G+ QRC + +++A + +
Sbjct: 657 TGLAYDPLMLKHACVCGETVRGHPEHGGRLQSVWARLSETGLLQRCDRIRSRKATLEEIQ 716
Query: 72 SVHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL-------------------NE-G 109
+ H+E H L ++ ++ D SKL+ + + NE
Sbjct: 717 TCHSEAHALLFGTNPMNRQKLD------VSKLSQLPIKSFVRLPCGGVGVDSDTTWNELN 770
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
++ AA +A G V+++A + A G++ + FA+VRPPGHHAE ++AMGFC +N++A+AA L
Sbjct: 771 TAPAARMAVGCVVDLAFKTAMGDIKNGFAVVRPPGHHAETNQAMGFCFFNSIAIAARLL- 829
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L I KILI+DWDVHHGN TQ+MF+ DPRVL+ S+HRH+ G F+P G T G
Sbjct: 830 --QQKLDIRKILILDWDVHHGNGTQQMFYDDPRVLYLSIHRHDEGNFFPGT--GGPTECG 885
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G GLGYN+NV W G GDA+YLA + I++P+AK F P+I+++SAGFDAA G
Sbjct: 886 AGEGLGYNVNVAWSGGLNPPMGDAEYLAAFRSIVMPIAKSFDPNIVLVSAGFDAAIGHPA 945
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG +V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D+P
Sbjct: 946 PLGGYKVSPACFGKMTQQLLGLANGKVVLALEGGYDLAAICDSAQECVRALLGDEPSQLR 1005
Query: 345 SEAYPFESTWRVIQAVRKKLS---AFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E + ++K ++ + WP + L A M + + E +
Sbjct: 1006 EEELTRAPCQNAVDTLQKTIAVQMSHWPCV---------KLNAHTVSMSAIEAGQKERDE 1056
Query: 402 VETLEAVLQVALSK 415
ET+ A+ +++ +
Sbjct: 1057 TETVSAMASLSMQQ 1070
>gi|189195388|ref|XP_001934032.1| histone deacetylase 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979911|gb|EDU46537.1| histone deacetylase 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 698
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 213/375 (56%), Gaps = 30/375 (8%)
Query: 14 RVGLLYDERMCKH------NTPDGDYHPENPNRIKAIWNKLQAAGI----------PQRC 57
+ GL+YD RM H N D HPE+P RI +I+ +++ AG+ C
Sbjct: 117 KTGLVYDPRMRFHAELPDMNINPDDIHPEDPRRIHSIFKEIKEAGLVASSTSEEDQQDHC 176
Query: 58 VVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLA 117
+ + A +L +HTE H + +K A L+SIY N + E A LA
Sbjct: 177 WRIATRYATKPEILLIHTEEHYDFLK------------EQAEGLDSIYFNHSTFECAKLA 224
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
AG IE + V +G + +A AI+RPPGHHAE D GFC++NNV +A PE
Sbjct: 225 AGGAIEACKAVVQGHVRNAIAIIRPPGHHAETDSPSGFCIFNNVPIATRVCQKAYPET-C 283
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
K+LI+DWDVHHGN Q F+ DP VL+ S+H + G FYP DG GEGPG G N
Sbjct: 284 RKVLILDWDVHHGNGIQHAFYNDPNVLYISLHVFKGGNFYPNLPDGDLNYCGEGPGEGKN 343
Query: 238 INVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
+N+PW + GDA+YL + +++P+A +F PD++IISAGFDAA GD LGGC VTP Y
Sbjct: 344 VNIPWADHGMGDAEYLYAFQEVVMPIATEFDPDLVIISAGFDAAEGDLLGGCFVTPACYG 403
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSE-AYPFESTWRV 356
M LM A+GK+V+ LEGGYNL SI+ S LA VL+ + P + P +S
Sbjct: 404 HMTHMLMRLAKGKLVVCLEGGYNLRSIARSALAVTRVLMLEPPDRLHIDLPGPKDSAVHT 463
Query: 357 IQAVRKKLSAFWPTL 371
++ V+++ S +W +L
Sbjct: 464 VENVKREHSRYWKSL 478
>gi|432864418|ref|XP_004070312.1| PREDICTED: histone deacetylase 7-like [Oryzias latipes]
Length = 953
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/380 (40%), Positives = 238/380 (62%), Gaps = 31/380 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD +M KH GD HPE+ RI++IW++LQ G+ +C + ++A + L S
Sbjct: 523 TGLVYDSQMLKHQCACGDNSSHPEHAGRIQSIWSRLQERGLRGQCESIRGRKATLEELQS 582
Query: 73 VHTENHVNL--IKNISSKQFDSRR------DRIASKL---------NSIYLNEGSSEAAY 115
VHTE HV L ++ + D+R+ R+ + L ++I+ +S A+
Sbjct: 583 VHTERHVLLYGTNPLNRLKLDNRKLAGIFSQRMFTMLPCGGVGVDNDTIWNESHTSTASR 642
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+AAGSV+E+A RVA+GEL + FA+VRPPGHHA+P MGFC +N+VA+AA L + +L
Sbjct: 643 MAAGSVVELAFRVAKGELKNGFAVVRPPGHHADPSNPMGFCYFNSVAIAAKQL---QQKL 699
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
++KILIVDWDVHHGN TQ++F+ D VL+ S+HR++ G F+P + G +G G G G
Sbjct: 700 SVSKILIVDWDVHHGNGTQEVFYNDRSVLYISLHRYDDGNFFPGS--GSPAEVGSGAGEG 757
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+N+ W G GDA+YLA + +++P+A++F PD++++SAGFDAA G+ PLGG +
Sbjct: 758 FNVNLAWTGGLDPPMGDAEYLAAFRSVVMPIAQEFSPDVVLVSAGFDAAEGNPAPLGGYK 817
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSSEAY 348
V+ + + +LM A G+++LALEGG++L +I ++ AC++ LL +D
Sbjct: 818 VSAKCFGFLTHQLMSLAGGRLILALEGGHDLTAICDASEACVSALLGMQDSMPEDVLLQK 877
Query: 349 PFESTWRVIQAVRKKLSAFW 368
P + R +Q V + S FW
Sbjct: 878 PNANAVRSLQTVIQIQSQFW 897
>gi|389739149|gb|EIM80343.1| histone deacetylase complex protein [Stereum hirsutum FP-91666 SS1]
Length = 674
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/368 (43%), Positives = 222/368 (60%), Gaps = 22/368 (5%)
Query: 15 VGLLYDERMCKH---NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
VG +Y+ +M H NT HPE P RI+ I++ R L ++A+ + +L
Sbjct: 44 VGYVYEPQMMLHSDENTSSAGDHPEQPARIRYIYDLFHQHKCLVRMRKLKIRKAEKEEVL 103
Query: 72 SVHTE---NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
VH+E HV ++++S ++F + +S+Y++ + +A L+ G VIE V
Sbjct: 104 LVHSEALWEHVMQLRDMSPEEFTLSESFYEA--DSLYVHPMTPLSARLSCGGVIEATLAV 161
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
A GEL FAIVRPPGHHAEP+ MGFC +NNV+VA + N P I K+LI+DWDVH
Sbjct: 162 ARGELLKTFAIVRPPGHHAEPNRPMGFCFFNNVSVAIKVMQNLTP---IKKVLILDWDVH 218
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQK F +DP VL+ S+HR+E G FYP+ G GEGPGLG+++N+PW G
Sbjct: 219 HGNGTQKAFNEDPNVLYISLHRYEGGRFYPSGPFGSMVSSGEGPGLGFSVNIPWPEKGTG 278
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DADY+ + I++P+A +F P+++IISAGFDAA GD LG C+VTP GY+ M L A
Sbjct: 279 DADYIHAFQRIVMPIAIEFSPEMVIISAGFDAAEGDHLGECKVTPAGYAHMTHMLSGLAG 338
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLL-----EDKPVAGSSEAYPFESTWRVIQAVRKK 363
G++V+ALEGGYNL + S S L+ LL E P+ S A E+ W+V AV +
Sbjct: 339 GRVVVALEGGYNLEATSTSALSVGRTLLGEAPPELGPLVASEAAS--ETVWQV--AVHQ- 393
Query: 364 LSAFWPTL 371
S +W L
Sbjct: 394 -SKYWHNL 400
>gi|195060356|ref|XP_001995788.1| GH17575 [Drosophila grimshawi]
gi|193896574|gb|EDV95440.1| GH17575 [Drosophila grimshawi]
Length = 1098
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 211/369 (57%), Gaps = 15/369 (4%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV YD +M H HPE P RI+ I + +R L + A +
Sbjct: 520 RVCYAYDAQMLLHCNLHDVTHPEQPQRIRQIHQMHTDYQLVERMKPLQPRTATTDEVCLA 579
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ ++ ++ D + ++ + NS+YL+ + + A LAAG+V++ + V GE
Sbjct: 580 HTRAHVNTVRRLAGRKPDELQ-QLGADYNSVYLHPSTFDCATLAAGAVLQAVDSVMRGET 638
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + E + +ILIVDWDVHHGN T
Sbjct: 639 RSGICNVRPPGHHAESDHPHGFCIFNNVAIAAQYAIRE---YQLERILIVDWDVHHGNGT 695
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ SVHR+E G F+P DG Y + G+ G G+N+N+PW GD +Y
Sbjct: 696 QHIFESNPKVLYISVHRYENGAFFPKGPDGNYDVCGKNAGCGFNVNIPWNKKGMGDVEYA 755
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ ++LP+A +F P ++++SAGFDAA GDPLGGC+VTP GY + L A G+I++
Sbjct: 756 LAFQQLILPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGLFTHWLSALAGGRIIV 815
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDK-PVAG----------SSEAYPFESTWRVIQAVRK 362
LEGGYN+ SIS ++ C LL D P++ S+ F+S +Q +
Sbjct: 816 CLEGGYNVNSISYAMTMCTKTLLGDPVPISSTSASSSSSALGSQTVAFQSCVETLQLCVE 875
Query: 363 KLSAFWPTL 371
+ W +L
Sbjct: 876 QQRKHWKSL 884
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 191/324 (58%), Gaps = 3/324 (0%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+YD+ M +H + H E P R + + + RC+ L ++ A + +L +H
Sbjct: 80 TALIYDDSMSEHRCLWDETHQERPERFTRTMERCRELKLVDRCLQLKSRLATKEEILKLH 139
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ H ++ S Q D + ++S ++I+++ + + + LA+GS IE+ +++ G+
Sbjct: 140 SMEHYERLEQTSGVQNDEALEELSSHYDAIFIHPSTFKLSLLASGSTIELVDQLLLGKAQ 199
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA E G+C +NNVA+AA ++ + +ILI+D+DVHHG TQ
Sbjct: 200 NGMAIIRPPGHHAMKSEFNGYCYFNNVALAAQHAIDA---YQLQRILIIDYDVHHGQGTQ 256
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+ F+ DPRVL+FS+HR+E G+F+P + + IG G G GYN NVP G+ DYLA
Sbjct: 257 RFFYNDPRVLYFSIHRYEHGSFWPNLPESDFHAIGSGAGTGYNFNVPLNAKGMGNGDYLA 316
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
++ +L+PVA +F P++I++SAG+DAA G P G VTP Y +L L+ A +I +
Sbjct: 317 IFQQLLVPVALEFQPELILVSAGYDAALGCPEGEMEVTPACYPHLLNPLLPLANARIAVI 376
Query: 315 LEGGYNLGSISNSVLACMNVLLED 338
LEGGY + S+S + LL D
Sbjct: 377 LEGGYCVDSLSEGAALTLRALLGD 400
>gi|327264204|ref|XP_003216905.1| PREDICTED: histone deacetylase 6-like [Anolis carolinensis]
Length = 1138
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 217/362 (59%), Gaps = 4/362 (1%)
Query: 10 TIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
T+ GL++DERM + P + PE P R+ AI +KL G+ +RCV + A+E ++
Sbjct: 118 TVPVGTGLVFDERMTEFCCPWDESFPECPERLVAIRDKLLQCGLLERCVPVLAREISEEE 177
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+L H+ ++ L+K+ + + ++ +S+YL+ S A LAAGSV++V E+V
Sbjct: 178 ILLAHSPEYLALMKSTETMS-KAELKSLSDTFDSVYLHPNSYHCACLAAGSVLQVVEKVW 236
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
GEL + A+VRPPGHHA+ D+ G+C++NNV +AA + R +LG++++LIVDWDVHH
Sbjct: 237 SGELCNGLAVVRPPGHHAQHDKMDGYCMFNNVGIAAQY---ARQKLGVDRVLIVDWDVHH 293
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
G TQ +F +P V +FS+HR+E G F+P + +G G G GYNINVPW+ GD
Sbjct: 294 GQGTQYLFEDNPSVCYFSIHRYEGGNFWPHLPESDSHAVGRGRGEGYNINVPWDQIGMGD 353
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
ADYLA + HIL+PVA +F P +++++AGFD+ GDP G TP ++ + LM + G
Sbjct: 354 ADYLAAFLHILMPVALEFQPQLVLVAAGFDSVIGDPKGEMATTPGCFAHLAHLLMPLSGG 413
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWP 369
K+VL+LEGGYNL S++ + LL D S P S + S FW
Sbjct: 414 KLVLSLEGGYNLQSLAEGTCTVLKALLGDPCPLLDSPLAPCRSALHSVSQTIAAHSKFWK 473
Query: 370 TL 371
L
Sbjct: 474 AL 475
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 233/428 (54%), Gaps = 32/428 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R G++YDE+M +H HPE P R+ I+ + + +RC L+A+ A ++ L
Sbjct: 520 RTGIVYDEKMMEHYNMWDSQHPELPQRVSRIFQRHGELRLTERCCRLSARLASEEELRMC 579
Query: 74 HTENHVNLIKNISSKQFDSRRD--RIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H+ +V +K+ ++ + RD R + NSI++ S E A LAAGS E V G
Sbjct: 580 HSLAYVETVKSTATMK---PRDLHRQGDQYNSIFICTSSYECARLAAGSAFSAVEAVLSG 636
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL--LNERPELGINKILIVDWDVHH 189
E+ +A AIVRPPGHHAE D A GFC +N+VA++A + L RP +++I+DWDVHH
Sbjct: 637 EVQNAVAIVRPPGHHAESDTACGFCFFNSVALSARYAQRLTGRP----MRVMILDWDVHH 692
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ MF DP VL+ S+HR++ GTF+P ++D Y +G GPG G+ +NVPW R GD
Sbjct: 693 GNGTQHMFENDPSVLYISIHRYDNGTFFPTSEDADYDQVGLGPGKGFTLNVPWNCPRMGD 752
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
+YLA + I++PVA +F P+++++SAGFDAA GDPLGGC VTP + M L+
Sbjct: 753 PEYLAAFHQIVMPVAYEFNPELVLVSAGFDAARGDPLGGCLVTPECKAHMTHLLLGLGG- 811
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWP 369
YNL SIS S+ C LL D P A P S + + V +W
Sbjct: 812 ---------YNLESISESMTMCTRSLLGDPPPALGRLKAPHPSALQSLACVASVHRKYWA 862
Query: 370 TLADELPTKL---------TSLKAPPAHMISSSDSEDEDTKVETLEAV--LQVALSKLKV 418
+L E+P L P +I +S + + + + VAL L++
Sbjct: 863 SLRLEVPALLWEKPRTRFGKGFPIPNDFLIKASQELLQSPTAQLVNPADEVVVALGSLQI 922
Query: 419 DDGHAELG 426
+D AE G
Sbjct: 923 EDSLAEEG 930
>gi|307192627|gb|EFN75801.1| Histone deacetylase 4 [Harpegnathos saltator]
Length = 845
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 250/434 (57%), Gaps = 53/434 (12%)
Query: 15 VGLLYDERMCKHNTPDGDY---HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
GL YD M KH G+ HPE+ R++++W +L G+ QRC + +++A + +
Sbjct: 407 TGLAYDPLMLKHACACGETVRGHPEHGGRLQSVWARLSETGLLQRCDRVRSRKATLEEIQ 466
Query: 72 SVHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL-------------------NE-G 109
+ H+E H L ++ ++ D SKL+ + + NE
Sbjct: 467 TCHSEAHALLFGTNPLNRQKLD------MSKLSQLPIKSFVRLPCGGVGVDSDTTWNELN 520
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
++ AA +A G V+++A + A G++ + FA+VRPPGHHAE ++AMGFC +N+VA+AA L
Sbjct: 521 TAPAARMAVGCVVDLAFKAAMGDIKNGFAVVRPPGHHAETNQAMGFCFFNSVAIAARLL- 579
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + +ILI+DWDVHHGN TQ+MF+ DP+VL+ S+HRH+ G F+P G T G
Sbjct: 580 --QQKLDVRRILILDWDVHHGNGTQQMFYDDPQVLYLSIHRHDDGNFFPGT--GGPTECG 635
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G GLGYN+NV W G GDA+YLA + I++P+AK+F PDI+I+SAGFDAA G
Sbjct: 636 AGEGLGYNVNVAWSGGLNPPMGDAEYLAAFRTIVMPIAKEFDPDIVIVSAGFDAAVGHPA 695
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG +V+P + M ++L++ A GK++LALEGGY+L +I +S C+ LL D+P
Sbjct: 696 PLGGYKVSPACFGRMTQQLLNLADGKVILALEGGYDLAAICDSAQECVRALLGDEPSPLR 755
Query: 345 SEAYPFESTWRVIQAVRKKLS---AFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
+ I ++K ++ + WP + L A M + S+ E +
Sbjct: 756 DDELTRIPCQNAIDTLQKTIAIQMSHWPCV---------KLAAHTVGMSAIEASQKEHDE 806
Query: 402 VETLEAVLQVALSK 415
ET+ A+ +++ +
Sbjct: 807 TETVSAMASLSMQQ 820
>gi|340720509|ref|XP_003398679.1| PREDICTED: histone deacetylase 4-like [Bombus terrestris]
Length = 1090
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 244/434 (56%), Gaps = 53/434 (12%)
Query: 15 VGLLYDERMCKHNTPDGDY---HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
GL YD M KH G+ HPE+ R++++W +L G+ QRC + +++A + +
Sbjct: 652 TGLAYDPLMLKHACVCGETVRGHPEHGGRLQSVWARLSETGLLQRCDRIRSRKATLEEIQ 711
Query: 72 SVHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL-------------------NE-G 109
+ H+E H L ++ ++ D SKL+ + + NE
Sbjct: 712 TCHSEAHALLFGTNPMNRQKLD------VSKLSQLPIKSFVRLPCGGVGVDSDTTWNELN 765
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
++ AA +A G V+++A + A G++ + FA+VRPPGHHAE ++AMGFC +N+VA+AA L
Sbjct: 766 TAPAARMAVGCVVDLAFKTAMGDIKNGFAVVRPPGHHAETNQAMGFCFFNSVAIAARLLH 825
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ L I KILI+DWDVHHGN TQ+MF+ DPRVL+ S+HRH+ G F+P G T G
Sbjct: 826 QK---LDIRKILILDWDVHHGNGTQQMFYDDPRVLYMSIHRHDEGNFFPGT--GGPTECG 880
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G GLGYN+NV W G GDA+YLA + I++P+AK F P I+++SAGFDAA G
Sbjct: 881 AGEGLGYNVNVAWSGGLNPPMGDAEYLAAFRTIVMPIAKAFDPSIVLVSAGFDAAVGHPA 940
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG +V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D+P
Sbjct: 941 PLGGYKVSPACFGKMTQQLLGLANGKVVLALEGGYDLAAICDSAQECVRALLGDEPTQLR 1000
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E P ++ +Q + WP + L A M + + E +
Sbjct: 1001 EEELTRIPCQNAVDTLQKTIAVQMSHWPCV---------KLNAHTVSMSAIEAGQKERDE 1051
Query: 402 VETLEAVLQVALSK 415
ET+ A+ +++ +
Sbjct: 1052 TETVSAMASLSMQQ 1065
>gi|326936481|ref|XP_003214282.1| PREDICTED: histone deacetylase 7-like [Meleagris gallopavo]
Length = 931
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 159/381 (41%), Positives = 228/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L
Sbjct: 499 TGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQC 558
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEGSSEAAY 115
VHTE HV L + ++A L ++I+ SS AA
Sbjct: 559 VHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAAR 618
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV E+A +VA EL + FA+VRPPGHHA+P AMGFC +N+VA+AA L +
Sbjct: 619 WAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKG--- 675
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+NKILIVDWDVHHGN TQ++F++DP VL+ S+HRH+ G F+P + G +G GPG G
Sbjct: 676 KLNKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGS--GAADEVGAGPGEG 733
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
+N+N+ W G GD +YLA + +++P+A +F PD++++SAGFDAA G PLGG +
Sbjct: 734 FNVNIAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYK 793
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EA 347
V+ + M K+LM A G +VLALEGG++L +I ++ AC++ LL E P+ S
Sbjct: 794 VSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQ 853
Query: 348 YPFESTWRVIQAVRKKLSAFW 368
P + R ++AV + S +W
Sbjct: 854 KPNANAVRSLEAVIQVQSKYW 874
>gi|383847406|ref|XP_003699345.1| PREDICTED: histone deacetylase 4-like [Megachile rotundata]
Length = 1173
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 248/434 (57%), Gaps = 53/434 (12%)
Query: 15 VGLLYDERMCKHNTPDGDY---HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
GL YD M KH G+ HPE+ R++++W +L G+ QRC + +++A + +
Sbjct: 735 TGLAYDPLMLKHACDCGETVRGHPEHGGRLQSVWARLSETGLLQRCDRIRSRKATLEEIQ 794
Query: 72 SVHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL-------------------NE-G 109
+ H+E H L ++ ++ D SKL+ + + NE
Sbjct: 795 TCHSEAHALLFGTNPMNRQKLD------VSKLSQLPIKSFVRLPCGGIGVDSDTTWNELN 848
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
++ AA +A G V+++A + A G++ + FA+VRPPGHHAE ++AMGFC +N+VA+AA L
Sbjct: 849 TAPAARMAVGCVVDLAFKTAMGDIKNGFAVVRPPGHHAETNQAMGFCFFNSVAIAARLL- 907
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + KI+I+DWDVHHGN TQ+MF+ DPRVL+ S+HRH+ G F+P G T G
Sbjct: 908 --QQKLDVRKIMILDWDVHHGNGTQQMFYDDPRVLYLSIHRHDEGNFFPGT--GGPTECG 963
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G GLGYN+NV W G GDA+YLA + +++P+A+ F P I+++SAGFDAA G
Sbjct: 964 AGEGLGYNVNVAWSGGLNPPMGDAEYLAAFRTVVMPIARAFDPSIVLVSAGFDAAVGHPA 1023
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG +V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D+P
Sbjct: 1024 PLGGYKVSPACFGKMTQQLLGLANGKVVLALEGGYDLAAICDSAQECVRALLGDEPSQLR 1083
Query: 345 SEAYPFESTWRVIQAVRKKLSA---FWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E I ++K ++ WP + KL + AP + + + DE
Sbjct: 1084 DEELTRAPCQNAIDTLQKTIAVQMPHWPCV------KLNAHTAPMSAIEAGQKERDES-- 1135
Query: 402 VETLEAVLQVALSK 415
ET+ A+ +++ +
Sbjct: 1136 -ETVSAMASLSMQQ 1148
>gi|355757339|gb|EHH60864.1| Histone deacetylase 6 [Macaca fascicularis]
Length = 1307
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 204/365 (55%), Gaps = 54/365 (14%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 532 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 591
Query: 71 LSVHTE----------------------------------------NHVNLIKNISSKQF 90
L+ H E H+ + + +++
Sbjct: 592 LTCHRELLQDLRGAEVPVLRVGSREGMDPPHCPAGAPLCTSSAEYVGHLRATEKMKTREL 651
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD 150
R +S +SIY+ + A LA G+ + E V GE+ + A+VRPPGHHAE D
Sbjct: 652 H----RESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQD 707
Query: 151 EAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDWDVHHGNSTQKMFWKDPRVLFF 206
A GFC +N+VAVAA R I+ +ILIVDWDVHHGN TQ MF DP VL+
Sbjct: 708 AACGFCFFNSVAVAA------RHAQAISGRALRILIVDWDVHHGNGTQHMFEDDPSVLYV 761
Query: 207 SVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKD 266
S+HR++ GTF+P D+G + IG G G+ +NV W R GDADYLA W ++LP+A +
Sbjct: 762 SLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYE 821
Query: 267 FGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISN 326
F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM A G+I+L LEGGYNL SIS
Sbjct: 822 FNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISE 881
Query: 327 SVLAC 331
S+ AC
Sbjct: 882 SMAAC 886
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 208/367 (56%), Gaps = 14/367 (3%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 131 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 190
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 191 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 249
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 250 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 306
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN--------GR 246
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW +
Sbjct: 307 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVSIHPPFVPK 366
Query: 247 CG--DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM 304
G DADY+A + H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM
Sbjct: 367 VGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLM 426
Query: 305 DFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKL 364
A GK++L+LEGGYNL +++ V A ++ LL D S P S + + L
Sbjct: 427 GLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEAL 486
Query: 365 SAFWPTL 371
FW L
Sbjct: 487 EPFWEVL 493
>gi|193786046|dbj|BAG50935.1| unnamed protein product [Homo sapiens]
Length = 726
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 195/304 (64%), Gaps = 13/304 (4%)
Query: 33 YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDS 92
+HPE P RI I +L+ G+ RC+ L + A + LL+ H+ +V ++ ++++ +
Sbjct: 10 HHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLR--ATEKMKT 67
Query: 93 RR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDE 151
R R +S +SIY+ + A LA G+ + E V GE+ + A+VRPPGHHAE D
Sbjct: 68 RELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDA 127
Query: 152 AMGFCLYNNVAVAASFLLNERPELGIN----KILIVDWDVHHGNSTQKMFWKDPRVLFFS 207
A GFC +N+VAVAA R I+ +ILIVDWDVHHGN TQ MF DP VL+ S
Sbjct: 128 ACGFCFFNSVAVAA------RHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVS 181
Query: 208 VHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDF 267
+HR++ GTF+P +G + IG G G+ +NV W R GDADYLA W ++LP+A +F
Sbjct: 182 LHRYDHGTFFPMGGEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEF 241
Query: 268 GPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNS 327
P+++++SAGFDAA GDPLGGC+V+P GY+ + LM A G+I+L LEGGYNL SIS S
Sbjct: 242 NPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISES 301
Query: 328 VLAC 331
+ AC
Sbjct: 302 MAAC 305
>gi|389640459|ref|XP_003717862.1| histone deacetylase HDA1 [Magnaporthe oryzae 70-15]
gi|351640415|gb|EHA48278.1| histone deacetylase HDA1 [Magnaporthe oryzae 70-15]
gi|440469698|gb|ELQ38800.1| histone deacetylase HDA1 [Magnaporthe oryzae Y34]
gi|440479122|gb|ELQ59908.1| histone deacetylase HDA1 [Magnaporthe oryzae P131]
Length = 758
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 229/395 (57%), Gaps = 38/395 (9%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----------- 53
RR GLL YD+RM H D G +HPE+P+RI+AI+ + AG+
Sbjct: 74 RRRGLLPTGCCYDDRMKLHANADFGAGPHHPEDPSRIEAIFKTFKQAGLVFTGTDSELID 133
Query: 54 -----PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN----S 103
P + + A+EA + + VH H + +K +S+K R R+ +L+ S
Sbjct: 134 IIANKPSSYMWRIPAREATKEEICLVHYAKHYDWVKELSTKPTAQLR-RLTKELDKGQTS 192
Query: 104 IYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAV 163
+Y+ + EA+ ++AG IE + + G++ + FA++RPPGHHAE D AMGFC++NNV +
Sbjct: 193 VYVGSLTFEASLISAGGAIETCKSIVSGQIKNGFAVIRPPGHHAEQDSAMGFCIFNNVPI 252
Query: 164 AASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA---- 219
AA E PE+ K+LI+DWDVHHGN Q +F++DP VL+ S+H ++ G FYP
Sbjct: 253 AAKVCQAEYPEI-CQKVLILDWDVHHGNGIQNVFYEDPNVLYISLHVYKNGEFYPGKPEN 311
Query: 220 --NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAG 277
DG + G GPGLG NIN+ W++ GD +Y+A + I++P+A +F PD++IISAG
Sbjct: 312 PMTADGSISSCGSGPGLGRNINIGWDDQGMGDGEYIAAFQKIIMPIAHEFNPDLVIISAG 371
Query: 278 FDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL- 336
FDAAAGD LGGC VTP Y+ M LM A G++ + LEGGYNL +IS S LA L+
Sbjct: 372 FDAAAGDQLGGCFVTPPCYAHMTHMLMSLAHGRVAVCLEGGYNLSAISKSALAVARTLMG 431
Query: 337 EDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
E P G + R++ V+ + +W +
Sbjct: 432 EPPPKMGMASPKINREAARLLAQVQAYQAPYWECM 466
>gi|50553927|ref|XP_504372.1| YALI0E24893p [Yarrowia lipolytica]
gi|49650241|emb|CAG79971.1| YALI0E24893p [Yarrowia lipolytica CLIB122]
Length = 748
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 226/401 (56%), Gaps = 24/401 (5%)
Query: 3 VKSGEGRTIKRRVGLLYDERMCKHN---TPDGDY---HPENPNRIKAIWNKLQAAGI--- 53
+K+ + R I + G+ YD RM H + DY HPE+P RI +++ L AG+
Sbjct: 79 LKAPQLRYIPLKTGVCYDVRMRYHARLVSTSYDYVDPHPEDPRRIFSVYKALVDAGLVVD 138
Query: 54 PQRCVV---------LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSI 104
P+ + + +EA +L VHT HV+ + + + K + K +S+
Sbjct: 139 PEYLGLEDIGPLMEKIPIREASLDEVLEVHTPAHVDFLAS-TEKMNRPQLLEEGEKGDSV 197
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y N S A L+ G IE V E + +A A+VRPPGHHAEP GFC+++NVAVA
Sbjct: 198 YFNNESFSAGKLSCGGTIETCRAVIERNVKNAIAVVRPPGHHAEPGNPAGFCMFSNVAVA 257
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGF 224
A LL PE + +ILI+DWDVHHGN TQ+ F DPRVL+ S+H++E G FYP G
Sbjct: 258 AKVLLKRYPER-VKRILILDWDVHHGNGTQRAFLDDPRVLYISLHQYENGKFYPGGTFGA 316
Query: 225 YTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284
+T +G G G GY++N+PW GDADY+ + +++P+ +F PD +I+SAGFDAA GD
Sbjct: 317 HTSVGTGAGEGYSVNIPWSAPGAGDADYIYAFQKVVMPIGMEFDPDFVIVSAGFDAAEGD 376
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
LGGC++TP GY M L A G + + LEGGY L + + S LA VLL + P+
Sbjct: 377 LLGGCKITPSGYGHMTHMLKGLASGNLAVVLEGGYTLEATAKSALAVTKVLLGEAPLPLP 436
Query: 345 SEAYPFESTWRVIQAVRKKLSAFW----PTLADELPTKLTS 381
+ P +T V+Q V + S +W P +P ++T+
Sbjct: 437 AAFKPTSATISVVQDVVETQSQYWRCLQPGFETIIPKEITT 477
>gi|195356210|ref|XP_002044573.1| GM20078 [Drosophila sechellia]
gi|194132204|gb|EDW53826.1| GM20078 [Drosophila sechellia]
Length = 619
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 235/429 (54%), Gaps = 28/429 (6%)
Query: 10 TIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
+ R + YD +M H + HPE P+RI+ I G+ + L+A+ A
Sbjct: 17 AVGERCAMPYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLTQMKQLSARAATTDE 76
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+ HT HVN ++ + ++ D A NS+YL+ + + A LAAGSV++ + V
Sbjct: 77 VCLAHTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCAVLAAGSVLQAVDSVL 135
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
GE S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHH
Sbjct: 136 RGESRSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHH 192
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD
Sbjct: 193 GNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGD 252
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
+Y + +++P+A +F P ++++SAGFDAA GDPLGGC+VTP GY ++ L A G
Sbjct: 253 LEYALAFQQLVMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGMLTHWLSALASG 312
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVR 361
+I++ LEGGYN+ SIS ++ C LL D P G++ F+S +Q
Sbjct: 313 RIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQLCL 372
Query: 362 KKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSKLKVDDG 421
+ W +L + + P ++ +++ED L +L L + +
Sbjct: 373 QVQRNHWRSL------EFVGRRLPRDPVVGENNNED----------FLTASLRHLNISND 416
Query: 422 HAELGMATP 430
A + + P
Sbjct: 417 DATVAASGP 425
>gi|194692590|gb|ACF80379.1| unknown [Zea mays]
Length = 354
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/338 (44%), Positives = 201/338 (59%), Gaps = 60/338 (17%)
Query: 349 PFESTWRVIQAVRKKLSAFWPTLADELPTKLT-SLKAPPAHMISS---SDSEDEDTKVET 404
PFESTWRVIQAVR +L WP L+ +LP ++ +K P+ + +S SDSED D + T
Sbjct: 3 PFESTWRVIQAVRNELKTCWPVLSSKLPENVSLRIKPAPSELYASDSESDSEDVDELLGT 62
Query: 405 LEAVLQVA---------LSKLKVDDGHAEL------------------------------ 425
+ +V + LSK+K+DD +
Sbjct: 63 VASVSVIEATGVAISEHLSKMKLDDDSLAVKTNSSCSAAEQHPVDSVKVHNNASVVLTKK 122
Query: 426 --GMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEIL 483
++ WRS+LSK DV+YASFGSNMW+ RFLCYI+GG+ EGM PC GS+D + PK +
Sbjct: 123 ISDLSLEWRSDLSKTDVWYASFGSNMWRPRFLCYIQGGKAEGMNIPCCGSRDTSSPKGTV 182
Query: 484 WKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQEN---- 539
WKT PH L FG S+ WG GGVAFLNPE + K+Y+C+Y+ITLEQFND+L QEN
Sbjct: 183 WKTVPHRLLFGRSSTPCWGTGGVAFLNPEINYNEKSYVCMYKITLEQFNDILFQENRLVL 242
Query: 540 --------VYSDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTM 591
VY D SPL ++++ ++ +AV LE +K+ WY NV+YLG E +PILTM
Sbjct: 243 EDGKDGNTVYPD---SPLIGSSEIKFISTNRAVHLEPIKDSWYSNVLYLGNEDEVPILTM 299
Query: 592 TCSLSAVGKFKSGEFPLRAPAPPYTNTLIKGLVEGKQL 629
TC S + ++KSGE L P+ Y TLIKGLVEGKQ+
Sbjct: 300 TCPASDIERYKSGELRLAPPSETYAATLIKGLVEGKQM 337
>gi|444509359|gb|ELV09218.1| Histone deacetylase 6 [Tupaia chinensis]
Length = 1241
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/308 (45%), Positives = 201/308 (65%), Gaps = 9/308 (2%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K R GL+YD+RM H+ ++HPE P RI I ++L+ G+ +RC+ L A+ A + LL
Sbjct: 506 KARTGLVYDQRMMSHHNLWDNHHPEMPQRISRIMSRLEELGLARRCLPLPARLATNAELL 565
Query: 72 SVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
+ H+ +V+ ++ ++++ SR R + +SIY+ + A LA G+V + E V
Sbjct: 566 TCHSAEYVSRLR--ATERMKSRELHREGANYDSIYICPSTFACAQLATGAVCRLVEAVLR 623
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA--SFLLNERPELGINKILIVDWDVH 188
GE+ + AIVRPPGHHAE D A GFC +N+VAVAA + L+ R +ILIVDWDVH
Sbjct: 624 GEVLNGAAIVRPPGHHAEQDAACGFCFFNSVAVAARHAQALSGR----ALRILIVDWDVH 679
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ MF DP VL+ S+HR++ GTF+P +G IG G+G+ +NV W R G
Sbjct: 680 HGNGTQHMFEDDPSVLYMSLHRYDHGTFFPMGHEGASNQIGRAAGIGFTVNVAWNGPRMG 739
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DADYLA W ++LP+A +F P+++++SAGFDAA GDPLGGC+V+P GY+ + LM A
Sbjct: 740 DADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLAN 799
Query: 309 GKIVLALE 316
G+++L LE
Sbjct: 800 GRVLLILE 807
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 204/387 (52%), Gaps = 34/387 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE+P R AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 87 TGLVLDEQLNEFHCLWDDSFPESPQRFHAIKEQLIQEGLLDRCVSFPARFAEKEELMLVH 146
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ ++L++ + R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 147 SLEFIDLMETTQYMSEEELR-VLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEIR 205
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AIVRPPGHHA+ G+C++N+VA+AA + + ++LIVDWDVHHG TQ
Sbjct: 206 NGMAIVRPPGHHAQHSLMDGYCMFNHVAIAARYAQQKH---STQRVLIVDWDVHHGQGTQ 262
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 263 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 322
Query: 255 VWDHILLPVA------------------------------KDFGPDIIIISAGFDAAAGD 284
+ H+LLPVA F P +++++AGFDA GD
Sbjct: 323 AFLHVLLPVALEVLGTWGVFGRDCVEGQPVRTGDLIVCSPTQFQPQLVLVAAGFDALQGD 382
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
P G TP G++ + LM A G+++L+LEGGYNL S++ V A ++ LL D
Sbjct: 383 PKGEMAATPAGFAQLTHLLMGLAGGRLILSLEGGYNLRSLAKGVSASLHTLLGDPCPMLE 442
Query: 345 SEAYPFESTWRVIQAVRKKLSAFWPTL 371
S P S + + L FW L
Sbjct: 443 SPGAPCRSAQISLSCALEALEPFWEIL 469
>gi|330928204|ref|XP_003302166.1| hypothetical protein PTT_13889 [Pyrenophora teres f. teres 0-1]
gi|311322639|gb|EFQ89752.1| hypothetical protein PTT_13889 [Pyrenophora teres f. teres 0-1]
Length = 884
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 211/375 (56%), Gaps = 30/375 (8%)
Query: 14 RVGLLYDERMCKH------NTPDGDYHPENPNRIKAIWNKLQAAGI----------PQRC 57
+ GL+YD RM H N D HPE+P RI +I+ +++ AG+ C
Sbjct: 117 KTGLVYDPRMRFHAELPDMNINPDDIHPEDPRRIHSIFEEIKQAGLVASSTSEEDQQDHC 176
Query: 58 VVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLA 117
+ + A +L +HTE H + +K A L+SIY N + E A LA
Sbjct: 177 WRIATRFATKPEILLIHTEEHYDFLKEQ------------AEGLDSIYFNHSTYECAKLA 224
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
AG IE + V EG + +A AI+RPPGHHAE D GFC++NNV +A PE
Sbjct: 225 AGGAIEACKAVVEGHVRNAIAIIRPPGHHAETDSPSGFCIFNNVPIATRVCQKAYPET-C 283
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
K+LI+DWDVHHGN Q F+ DP VL+ S+H + G FYP DG GEG G G N
Sbjct: 284 RKVLILDWDVHHGNGIQHAFYDDPNVLYISLHVFKDGNFYPNLPDGNLNYCGEGLGEGKN 343
Query: 238 INVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
+N+PW GDA+YL + +++P+A +F PD++IISAGFDAA GD LGGC VTP Y
Sbjct: 344 VNIPWAEHGMGDAEYLYAFQEVVMPIATEFDPDLVIISAGFDAAEGDLLGGCFVTPACYG 403
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSE-AYPFESTWRV 356
M LM A+GK+V+ LEGGYNL SI+ S LA VL+ + P + P +S
Sbjct: 404 HMTHMLMRLAKGKLVVCLEGGYNLRSIARSALAVTRVLMLEPPDRLHIDLPGPKDSAVHT 463
Query: 357 IQAVRKKLSAFWPTL 371
++ V+++ S +W +L
Sbjct: 464 VENVKREHSRYWKSL 478
>gi|332023700|gb|EGI63924.1| Histone deacetylase 4 [Acromyrmex echinatior]
Length = 1030
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 250/443 (56%), Gaps = 53/443 (11%)
Query: 6 GEGRTIKRRVGLLYDERMCKHNTPDGDY---HPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
G + + GL YD M KH G+ HPE+ R++++W +L G+ QRC + +
Sbjct: 586 ARGSSHRPTTGLAYDPLMLKHACVCGETVRGHPEHGGRLQSVWARLSETGLLQRCDRIRS 645
Query: 63 KEAKDKNLLSVHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL-------------- 106
++A + + + H+E H L ++ ++ D SKL+ + +
Sbjct: 646 RKATLEEIQTCHSEAHALLFGTNPLNRQKLD------MSKLSQLPIKSFVRLPCGGVGVD 699
Query: 107 -----NE-GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNN 160
NE ++ AA +A G V+++A + A G++ + FA+VRPPGHHAE ++AMGFC +N+
Sbjct: 700 SDTTWNELNTAPAARMAVGCVVDLAFKTAVGDIKNGFAVVRPPGHHAETNQAMGFCFFNS 759
Query: 161 VAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAN 220
VA+AA L + +L + KILI+DWDVHHGN TQ+MF+ DPRVL+ S+HRH+ G F+P
Sbjct: 760 VAIAARLL---QQKLDVRKILILDWDVHHGNGTQQMFYDDPRVLYLSIHRHDDGNFFPGT 816
Query: 221 DDGFYTMIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAG 277
G T G G GLGYN+NV W G DA+YLA + I++P+AK+F PDI+I+SAG
Sbjct: 817 --GGPTECGAGKGLGYNVNVAWSGGLNPPMSDAEYLAAFRTIVMPIAKEFDPDIVIVSAG 874
Query: 278 FDAAAGD--PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
FDAA G PLGG +V+P + M + L++ A GK+VLALEGGY+L +I +S C+ L
Sbjct: 875 FDAAVGHPAPLGGYKVSPACFGRMTQHLLNVADGKVVLALEGGYDLAAICDSAQECVRAL 934
Query: 336 LEDKPVAGSSEAYPFESTWRVIQAVRKKLS---AFWPTLADELPTKLTSLKAPPAHMISS 392
L D+ E I ++K ++ + WP + L A M +
Sbjct: 935 LGDELSPLRDEELTRIPCQNAIDTLQKTIAIQMSHWPCV---------KLAAHTVAMSAI 985
Query: 393 SDSEDEDTKVETLEAVLQVALSK 415
S+ E + ET+ A+ +++ +
Sbjct: 986 EASQKEHDETETVSAMASLSMQQ 1008
>gi|71897189|ref|NP_001026573.1| histone deacetylase 7 [Gallus gallus]
gi|60098543|emb|CAH65102.1| hypothetical protein RCJMB04_3k14 [Gallus gallus]
Length = 946
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/426 (39%), Positives = 244/426 (57%), Gaps = 39/426 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L
Sbjct: 514 TGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQC 573
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEGSSEAAY 115
VHTE HV L + ++A L ++I+ SS AA
Sbjct: 574 VHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAAR 633
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV E+A +VA EL + FA+VRPPGHHA+P AMGFC +N+VA+AA L +
Sbjct: 634 WAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKG--- 690
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
++KILIVDWDVHHGN TQ++F++DP VL+ S+HRH+ G F+P + G +G GPG G
Sbjct: 691 KLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGS--GAADEVGAGPGEG 748
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
+N+N+ W G GD +YLA + +++P+A +F PD++++SAGFDAA G PLGG +
Sbjct: 749 FNVNIAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYK 808
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EA 347
V+ + M K+LM A G IVLALEGG++L +I ++ AC++ LL E P+ S
Sbjct: 809 VSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQ 868
Query: 348 YPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEA 407
P + R ++AV + S +W +KL+ + + E E+ + T A
Sbjct: 869 KPNANAVRSLEAVIQVQSKYW-VAVQRFASKLS------CSFLEAQHHEAEEVETVTALA 921
Query: 408 VLQVAL 413
L VA+
Sbjct: 922 SLSVAV 927
>gi|168059644|ref|XP_001781811.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162666718|gb|EDQ53365.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 535
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/330 (45%), Positives = 203/330 (61%), Gaps = 15/330 (4%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNL 70
+++ + YD+RM H G HPE P+R++AI LQA+G+ C + A+EA L
Sbjct: 122 EKKTAIGYDDRMLLHEE-TGKSHPERPDRLRAIMGGLQASGLLSGTCFTIPAREATQAEL 180
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
VHT NH+ ++ + ++ Y NE S+ AA LAAG ++A +
Sbjct: 181 ELVHTANHIGAVQATEGQD-------LSYFTPDTYANEHSALAARLAAGICTDLASAIMT 233
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ ++ FA VRPPGHHAE ++ MGFCL+NN VAA + K+LIVDWDVHHG
Sbjct: 234 GKAHNGFAAVRPPGHHAEQEQVMGFCLHNNACVAARAAQAAGAK----KVLIVDWDVHHG 289
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ++F +DP VL+ S+HRHE G FYP G+ +G GPG G+ +N+PW G GD
Sbjct: 290 NGTQEIFEQDPTVLYISLHRHEAGAFYPGT--GWAHQVGSGPGEGFCVNIPWSCGGIGDG 347
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYL+ + H+++P+A+ F PD+ IISAGFDAA GDPLGGC VTP GY+ M L + G+
Sbjct: 348 DYLSAFQHVVMPIARQFEPDMTIISAGFDAARGDPLGGCDVTPEGYAQMTFLLSSLSGGR 407
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKP 340
I++ LEGGYNL SIS S A M VL P
Sbjct: 408 ILVVLEGGYNLRSISASAAAVMKVLQGTNP 437
>gi|328854528|gb|EGG03660.1| hypothetical protein MELLADRAFT_90044 [Melampsora larici-populina
98AG31]
Length = 670
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 221/381 (58%), Gaps = 19/381 (4%)
Query: 15 VGLLYDERMCKHNTPDGDY-----------HPENPNRIKAIWNKLQAAGIPQRCVVLNAK 63
G+ E+M KH PD + PE P+RI I ++ A + + + +
Sbjct: 48 TGICSSEQMLKHWKPDCHFDHEDDDDDDDDEPERPSRITRIMAQVTKAKLIPHLLHVQVR 107
Query: 64 EAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAGSV 121
+A + ++ VH+E H N I++ +S +DR S+L S+++N + + A L+ G V
Sbjct: 108 KATKEEIMLVHSEGHWNRIQDTASMDIQELKDRATYYSRL-SLFVNAETFDCARLSCGGV 166
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
IE+ V EG + + FA+VRPPGHH+EP++ GFC++NN AV A +L P+ I +IL
Sbjct: 167 IEMCRAVVEGRIRNGFAVVRPPGHHSEPEDPSGFCVFNNAAVTAKWLRTIYPD-KIRRIL 225
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRH-EFGT---FYPANDDGFYTMIGEGPGLGYN 237
++DWDVHHGN TQ+ F+ DP VL+ S+HR+ E G FYP +D G T IGEG G GYN
Sbjct: 226 LIDWDVHHGNGTQRSFYHDPSVLYISIHRYLENGRTTYFYPGSDWGGSTRIGEGLGRGYN 285
Query: 238 INVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
+N+PW GD DY+ + +++P+A +F PD +I+SAGFDAA DPLG C VTP G++
Sbjct: 286 VNIPWPEAGMGDEDYIFAFQRLVMPIAMEFNPDFVIVSAGFDAAKNDPLGECNVTPAGFA 345
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVI 357
+M L A G IVLALEGGY+L S++ S C+ VL+ + P + +
Sbjct: 346 LMTHMLSSLANGNIVLALEGGYHLESLALSATECIKVLMGETPPKLEKALVASDVATETV 405
Query: 358 QAVRKKLSAFWPTLADELPTK 378
+ + FW +L L T+
Sbjct: 406 DECLRVQAEFWKSLPRGLLTQ 426
>gi|398407225|ref|XP_003855078.1| histone deacetylase [Zymoseptoria tritici IPO323]
gi|339474962|gb|EGP90054.1| histone deacetylase [Zymoseptoria tritici IPO323]
Length = 795
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 228/396 (57%), Gaps = 27/396 (6%)
Query: 14 RVGLLYDERMCKH--NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCV-----------VL 60
+ GL+YD RM H + P+ D HPE+P RI AI+ AG+ R +
Sbjct: 72 QTGLIYDVRMRFHVESEPEEDLHPEDPRRIHAIFEAFVNAGLVWRQSEVGPPSGYYMGRI 131
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIAS---KLNSIYLNEGSSEAAYLA 117
+ + + VHTENH N ++++S K+ D RD + +L+S+YL+ + A L+
Sbjct: 132 DTRMVTKDEVCLVHTENHWNWVQSLSRKEPDELRDELQHPPHRLDSVYLSTSTPYCAGLS 191
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
AG IE + G++ + FA++RPPGHHAE ++A GFC Y+NV++A E +
Sbjct: 192 AGGAIEACRAIIMGKVKNVFAVIRPPGHHAEREDAKGFCFYDNVSIATKVCQKEFGD-KC 250
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAN---DD----GFYTMIGE 230
K+LI+DWDVHHGN Q+ + DP VL+ S+H H+ GTFYP DD G + GE
Sbjct: 251 RKVLILDWDVHHGNGIQQANYSDPNVLYISLHVHKKGTFYPEKSYRDDRVSYGDHLHCGE 310
Query: 231 GPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCR 290
G GLG N+N+PW GDADY+ + +++P+A +F PD++II+AGFDAA GD LGGC+
Sbjct: 311 GAGLGKNVNIPWSKMGMGDADYVYAFQQVVMPIATEFNPDLVIIAAGFDAAEGDMLGGCK 370
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPF 350
VTP GY+ M LM A+GK+ + LEGGYNL +I+ S A ++ + P A
Sbjct: 371 VTPAGYAHMTHMLMSLAKGKMAVCLEGGYNLDAIARSSCAVGRTMMGEPPDRLEDLAASR 430
Query: 351 ESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPP 386
V Q +R++ S FW +L + P + L PP
Sbjct: 431 SGIDDVKQVLRQQ-SRFWASLHPKDPASM--LPGPP 463
>gi|194894640|ref|XP_001978099.1| GG17876 [Drosophila erecta]
gi|190649748|gb|EDV47026.1| GG17876 [Drosophila erecta]
Length = 1130
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 200/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV YD +M H + HPE P RI+ I + R L+A+ A +
Sbjct: 534 RVCYAYDAQMLLHCNLNDTGHPEQPTRIQQIHKMHGEYALLPRMKQLSARAATTDEVCLA 593
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ + A+ NS+YL+ + + A LAAGSV++ + V GE
Sbjct: 594 HTRAHVNTVRRLLGREPEDLHG-AAAIYNSVYLHPRTFDCATLAAGSVLQAVDSVLRGES 652
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D+ GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 653 RSGICNVRPPGHHAEQDQPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 709
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 710 QHIFESNPKVLYMSLHRYEHGAFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 769
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VTP GY ++ L A G+I++
Sbjct: 770 LAFQQLVMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGMLTHWLSALASGRIIV 829
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 830 CLEGGYNVNSISYAMTMCTKTLLGD 854
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 129/328 (39%), Positives = 194/328 (59%), Gaps = 3/328 (0%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M H H E P R + + + +P+RC+ L ++ A +
Sbjct: 103 VRKPTALIYDESMSHHCCLWDKEHYECPERFTRVLERCRELNLPERCLELPSRSATKDEI 162
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 163 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 222
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+AA L+ + +ILI+D+DVHHG
Sbjct: 223 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALAAQHALDVHK---LQRILIIDYDVHHG 279
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 280 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLQESDYHAIGAGAGTGYNFNVPLNALGMTNG 339
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 340 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 399
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLED 338
+ + LEGGY L S++ + LL D
Sbjct: 400 VAVVLEGGYCLDSLAEGAALTLRSLLGD 427
>gi|432935583|ref|XP_004082033.1| PREDICTED: histone deacetylase 4-like [Oryzias latipes]
Length = 1084
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 246/407 (60%), Gaps = 27/407 (6%)
Query: 11 IKRR--VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
+K R GL+YD M KH G+ HPE+ RI++IW++LQ G+ C V+ ++A
Sbjct: 654 VKHRFTTGLVYDSLMQKHQCICGNSTIHPEHAGRIQSIWSRLQETGLRAHCEVIRGRKAS 713
Query: 67 DKNLLSVHTENHVNLI-KNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYL 116
+ L +VH+E HV L N ++ D + + +L ++I+ SS AA L
Sbjct: 714 PEELQTVHSEAHVQLYGTNPLRQRLDCSVNPVFVRLPCGGIGVDSDTIWNEVHSSSAARL 773
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
A GSV+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L
Sbjct: 774 AVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LN 830
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G+G+
Sbjct: 831 VSKILIVDWDVHHGNGTQQAFYADPNVLYLSLHRYDDGNFFPGS--GAPDEVGSGAGVGF 888
Query: 237 NINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRV 291
N+NV + G DA+YLA + +++P+AK+F PD++++S+GFDA G PLGG +V
Sbjct: 889 NVNVAFTGGLEPPMADAEYLAAFRTVVMPIAKEFAPDMVLVSSGFDAVDGHAPPLGGYKV 948
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAY 348
T + + ++LMD A G++VLALEGG++L +I ++ AC++ LL E +P+ +
Sbjct: 949 TSKCFGYLTRQLMDLAGGRLVLALEGGHDLTAICDASEACISALLGNELEPIPEEVLQQR 1008
Query: 349 PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDS 395
P + ++ V + S +W +L T SL H + +++
Sbjct: 1009 PNANAVSSLEKVMETHSKYWRSLQRSASTLCCSLSEALQHDVEEAET 1055
>gi|195478791|ref|XP_002100654.1| GE17180 [Drosophila yakuba]
gi|194188178|gb|EDX01762.1| GE17180 [Drosophila yakuba]
Length = 1136
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 202/325 (62%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV YD +M H + HPE P+RI+ I + R +L+A+ A +
Sbjct: 542 RVCYAYDAQMLLHCNLNDTGHPEQPSRIEHIHKMHGEYALLPRMKLLSARAATTDEVCLA 601
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ + A+ NS+YL+ + + A LAAGSV++ + V GE
Sbjct: 602 HTRAHVNTVRRLLGREPEDLYG-AAAIYNSVYLHPRTFDCATLAAGSVLQAVDSVLRGES 660
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D+ GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 661 RSGICNVRPPGHHAEQDQPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 717
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 718 QHIFESNPKVLYISLHRYEHGAFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 777
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VTP GY ++ L A G+I++
Sbjct: 778 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGMLTHWLSALASGRIIV 837
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 838 CLEGGYNVNSISYAMTMCTKTLLGD 862
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 231/443 (52%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 111 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLAERCLELPSRSATKDEI 170
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K + + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 171 LRLHTEEHFERLKATAGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLIA 230
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ ++ AI+RPPGHHA E G+C +NNVA+AA L+ + +ILI+D+DVHHG
Sbjct: 231 GKAHNGMAIIRPPGHHAMKAEFNGYCFFNNVALAAQHALDVH---KLQRILIIDYDVHHG 287
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 288 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 347
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 348 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 407
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 408 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 466
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + K+ W P D PT+ T++ PP + S++
Sbjct: 467 RCLQLQQTYDCADLQDRDKEQELHKVLRHWIGGPPPVDRYPTRDTAIPLPPEKLASNA-- 524
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L ++++ ++V
Sbjct: 525 ----ARLQVLRTETKLSVPSVRV 543
>gi|19111896|ref|NP_595104.1| histone deacetylase (class II) Clr3 [Schizosaccharomyces pombe
972h-]
gi|3023933|sp|P56523.1|CLR3_SCHPO RecName: Full=Histone deacetylase clr3; AltName: Full=Cryptic loci
regulator 3
gi|4159999|gb|AAD05212.1| putative histone deacetylase [Schizosaccharomyces pombe]
gi|9716243|emb|CAC01518.1| histone deacetylase (class II) Clr3 [Schizosaccharomyces pombe]
Length = 687
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/425 (38%), Positives = 232/425 (54%), Gaps = 28/425 (6%)
Query: 4 KSGEGRTIKRRVGLLYDERMCKHNT-PDGDYHPENPNRIKAIWNKLQAAG----IPQRCV 58
+S E I ++ GL YD RM H T + D HPE+P R+ ++ ++ AG +P
Sbjct: 46 ESHEMSQILKKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSD 105
Query: 59 V---LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
V + A+EA + LL VH++ + + N + K + +S+Y N S+ A
Sbjct: 106 VFLRIPAREATLEELLQVHSQEMYDRVTN-TEKMSHEDLANLEKISDSLYYNNESAFCAR 164
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
LA GS IE V G++ +AFA+VRPPGHHAEP + GFCL+NNV+V A +L P+
Sbjct: 165 LACGSAIETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPD- 223
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I ++LIVDWD+HHGN TQ F+ DP VL+ S+HR+E G FYP + G GEGPGLG
Sbjct: 224 KIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLG 283
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N+PW GD DY+ + +++PVA +F PD++I+S GFDAAAGD +G +TP
Sbjct: 284 RTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAA 343
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
Y+ M + LM A GK+ ++LEGGYNL SIS S LA LL P Y
Sbjct: 344 YAHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPP-GRLHTTYACPQAVA 402
Query: 356 VIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSK 415
I V K S +W + P H D+ +D V+ L V++ +K
Sbjct: 403 TINHVTKIQSQYWRCMR-------------PKHF----DANPKDAHVDRLHDVIRTYQAK 445
Query: 416 LKVDD 420
+D
Sbjct: 446 KLFED 450
>gi|345564453|gb|EGX47416.1| hypothetical protein AOL_s00083g509 [Arthrobotrys oligospora ATCC
24927]
Length = 770
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 219/393 (55%), Gaps = 45/393 (11%)
Query: 14 RVGLLYDERMCKHNTPDG-DYHPENPNRIKAIWNKLQAAGIPQR-------------CVV 59
R GL YD RM H T D D HPE+P RI I+ L +AG+ + V
Sbjct: 110 RTGLCYDVRMRFHATLDEEDVHPEDPRRIHVIYQALASAGLTKLPEGGSELENEDGLMVR 169
Query: 60 LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAG 119
+ A+E + L VHT +H + + S + + +S++ N S A L+ G
Sbjct: 170 IRAREVTEDEALLVHTSDHWRFLTTLPDLDKASLLNLTLTG-DSVFYNNQSFTCAKLSCG 228
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
IE + V G++ +A A+VRPPGHHAEP ++MGFCL+NNVAVAA + PE K
Sbjct: 229 GSIETCKAVWSGQVKNAIAVVRPPGHHAEPHKSMGFCLFNNVAVAARVIRQGNPEC--EK 286
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
I+I+DWDVHHGN TQ F++D VL+ S+HR E GTFYP DG T GEG GLGYN+N
Sbjct: 287 IMILDWDVHHGNGTQTAFYEDDSVLYVSLHRFEGGTFYPPYPDGDLTYCGEGGGLGYNVN 346
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+PW G DADY+ + +++P+A ++ PD++IISAGFDAAAGD +G C VTP GY+ M
Sbjct: 347 IPWATGGIRDADYIYAFQRVVMPIAYEYQPDLVIISAGFDAAAGDKIGECFVTPAGYAHM 406
Query: 300 LKKLMDFAQGKIVLALE---------------------GGYNLGSISNSVLACMNVLLED 338
LM A G++ + LE GGYNL SISNS LA L+ +
Sbjct: 407 THMLMSLANGRVAVCLEVIRFPTRLPISIPSKLTTMLQGGYNLNSISNSALAVARTLMGE 466
Query: 339 KPVAGSSEAYPFESTWRVIQAVRKKL---SAFW 368
P + ++ +V++ V + + S +W
Sbjct: 467 PP----EPLHDVHASPKVVEVVNQVIIQQSQYW 495
>gi|401885828|gb|EJT49913.1| histone deacetylase clr3 [Trichosporon asahii var. asahii CBS 2479]
Length = 709
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/369 (43%), Positives = 218/369 (59%), Gaps = 37/369 (10%)
Query: 14 RVGLLYDERMCKH------NTPD----GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAK 63
R G +YD M H T D G+ HPE P RIK I+ +L+ G+ +R L ++
Sbjct: 77 RTGYVYDPLMMLHCQDGYVPTEDIHDTGEGHPEEPMRIKRIFTRLKDNGLIRRMKALPSR 136
Query: 64 EAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIE 123
E + + VH ++H +K ++ F D + Y N
Sbjct: 137 ECTLEQVRLVHGDDH--WLKVQGTETF---TDEYIQETKQYYEN---------------- 175
Query: 124 VAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI-NKILI 182
++ V G++ +AFAIVRPPGHHAEPDE MGFC +NNVAVAA + E G+ K+LI
Sbjct: 176 LSLAVCTGQVRNAFAIVRPPGHHAEPDEHMGFCFFNNVAVAAREMQKE----GLAKKVLI 231
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
+DWDVHHGN TQ+ FW DP VL+ S+HRH+ G FYP++D G M+GEGPG G ++N+PW
Sbjct: 232 LDWDVHHGNGTQRAFWNDPNVLYISLHRHDGGKFYPSSDFGALDMVGEGPGEGKSVNIPW 291
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+G GD DY+ + I++P+A +F PD++IIS+GFDAA GD LG C VTP GY M
Sbjct: 292 PSGGFGDGDYIYAFQKIVMPIAYEFEPDLVIISSGFDAADGDHLGQCHVTPAGYGHMTHM 351
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
L A G++V+ALEGGYNL +IS+S LA VLL + P A + E+ V++ V K
Sbjct: 352 LSALAGGRLVVALEGGYNLRAISDSSLAVAQVLLGETP-AELTHVEASEAATEVVRQVAK 410
Query: 363 KLSAFWPTL 371
S FW ++
Sbjct: 411 VQSRFWKSV 419
>gi|302680236|ref|XP_003029800.1| hypothetical protein SCHCODRAFT_78264 [Schizophyllum commune H4-8]
gi|300103490|gb|EFI94897.1| hypothetical protein SCHCODRAFT_78264 [Schizophyllum commune H4-8]
Length = 673
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 212/349 (60%), Gaps = 18/349 (5%)
Query: 1 MEVKSGEGR----TIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQR 56
MEV + E R R VG ++ M H+ P+G H E P RI I+ LQ +G +
Sbjct: 12 MEVGNHEKRPQSYETSRAVGYVFSPEMLGHSKPEG--HEEQPARITRIFEALQRSGCIEA 69
Query: 57 CVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN-----SIYLNEGSS 111
+ L + A + ++ VH+E+H N + + Q+ + + +IA N S+Y+ + ++
Sbjct: 70 MIRLKIRPALKEEVILVHSEDHWN---KVMAFQYMTDQ-QIADSANFYEHLSLYVCQSTT 125
Query: 112 EAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNE 171
AA ++ G VIE VA GE+ +FAIVRPPGHHAEP+E GFC NNVAVAA +
Sbjct: 126 LAARMSCGGVIEACLAVARGEVAKSFAIVRPPGHHAEPEEHSGFCFLNNVAVAARVV--- 182
Query: 172 RPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEG 231
+ I KI+I+DWD+HHGN T + F DP VL+ S+HR++ G FYP G + GEG
Sbjct: 183 QQATNIKKIMILDWDIHHGNGTHRAFIDDPSVLYISLHRYDGGVFYPGGTLGGMSSCGEG 242
Query: 232 PGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRV 291
GLGY++N+PW DADY+ + I++P+A +F P+++IISAGFDAA GD LG C V
Sbjct: 243 AGLGYSVNIPWPQAGMTDADYIHAFQRIVMPIAMEFAPELVIISAGFDAADGDTLGECHV 302
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
+P GYS M L A GK+V+ALEGGYNL SIS S A +V+L P
Sbjct: 303 SPAGYSHMTHMLASLAGGKLVVALEGGYNLDSISASADAVAHVILGGAP 351
>gi|347963763|ref|XP_310688.5| AGAP000410-PA [Anopheles gambiae str. PEST]
gi|333467046|gb|EAA06252.5| AGAP000410-PA [Anopheles gambiae str. PEST]
Length = 1004
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 235/396 (59%), Gaps = 22/396 (5%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL +D M KH GD HPE+ R+++IW +L G+ RC L +++A + L +
Sbjct: 588 TGLAFDSLMLKHVCACGDNANHPEHSGRLQSIWARLLGTGLAIRCDKLRSRKATQEELQT 647
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VHTE H L + Q + R+ S+++ + L + AA +AAG VI+++ +VA GE
Sbjct: 648 VHTEGHALLF---GTSQLN-RQKVDTSRVSFVRLAIIPAAAARMAAGCVIDLSYKVARGE 703
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ FA+VRPPGHHAE D AMGFC +N++A+AA L + P + +ILIVDWDVHHGN
Sbjct: 704 NRNGFAVVRPPGHHAEADAAMGFCFFNSIALAARLLRHRMPH-EMRRILIVDWDVHHGNG 762
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG---RCGD 249
TQ+ F+ D VL+ SVHRH+ G F+P G G G GLGYN+NV W G GD
Sbjct: 763 TQQAFYDDASVLYLSVHRHDDGNFFPGT--GGPAECGVGTGLGYNVNVAWSGGVNPPLGD 820
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYSVMLKKLMDFA 307
A+YLA + +++P+A+DF PDI+++SAGFDAA G PLGG V+P + + ++LM A
Sbjct: 821 AEYLAAFRTVVMPIARDFAPDIVLVSAGFDAAVGHPAPLGGYVVSPACFGHLTRELMQLA 880
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSSEAY-PFESTWRVIQAVRKKL 364
GKIVLALEGGY+L +I +S C+ LL + +A S A P ++ +Q
Sbjct: 881 NGKIVLALEGGYDLPAICDSAEECVRALLGESTSSIAPSELARPPCQAAVETLQKTIAIQ 940
Query: 365 SAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDT 400
+ WP + T L A AH SS+ E+ DT
Sbjct: 941 VSHWPCVKRLAHT--VGLSALQAH---SSEREESDT 971
>gi|255718405|ref|XP_002555483.1| KLTH0G10340p [Lachancea thermotolerans]
gi|238936867|emb|CAR25046.1| KLTH0G10340p [Lachancea thermotolerans CBS 6340]
Length = 708
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 155/376 (41%), Positives = 212/376 (56%), Gaps = 26/376 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ GL YD RM H Y HPE+P RI I+ L G I
Sbjct: 58 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLIDDPTLSGVDSIGD 117
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI---ASKLNSIYLNEGSSE 112
+ + +EA D+ +L VHT+ H+ I SK RD++ K +S+Y N S
Sbjct: 118 LMLKIPVREATDEEILQVHTKEHLEFI----SKTTSMTRDQLLKETEKGDSVYFNNDSYL 173
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + +A A+VRPPGHHAEP+ A GFCL++NVAVAA +L
Sbjct: 174 SAKLSCGGAIEACKAVVEGRVKNALAVVRPPGHHAEPEVAGGFCLFSNVAVAAQNILKNY 233
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + KI+++DWDVHHGN TQK F+ D RVL+ S+HRHE G +YP G +GEG
Sbjct: 234 PE-SVRKIMVLDWDVHHGNGTQKAFYDDDRVLYISLHRHELGKYYPGTIHGNSDRVGEGK 292
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+N N+PW GD++YL ++ +++P+ ++F PD++IIS+GFDAA GD +G C VT
Sbjct: 293 GEGFNCNIPWPWKGVGDSEYLWAFEQVIMPMGREFRPDLVIISSGFDAADGDTVGQCHVT 352
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFES 352
P Y M L A+G + LEGGY+L SI+ S LA VL+ + P P
Sbjct: 353 PSCYGHMTHMLKSLARGNLCAVLEGGYSLDSIAKSALAVAKVLIGEPPDELPVVKQPKLE 412
Query: 353 TWRVIQAVRKKLSAFW 368
VI +V K S +W
Sbjct: 413 AVEVIDSVIKTQSKYW 428
>gi|406695694|gb|EKC98996.1| histone deacetylase clr3 [Trichosporon asahii var. asahii CBS 8904]
Length = 709
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 158/369 (42%), Positives = 218/369 (59%), Gaps = 37/369 (10%)
Query: 14 RVGLLYDERMCKH------NTPD----GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAK 63
R G +YD M H T D G+ HPE P RIK I+ +L+ G+ +R L ++
Sbjct: 77 RTGYVYDPLMMLHCQDGYVPTEDIHDTGEGHPEEPMRIKRIFTRLKDNGLIRRMKALPSR 136
Query: 64 EAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIE 123
E + + VH ++H +K ++ F D + Y N
Sbjct: 137 ECTLEQVRLVHGDDH--WLKVQGTETF---TDEYIQETKQYYEN---------------- 175
Query: 124 VAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI-NKILI 182
++ V G++ +AFAIVRPPGHHAEPDE MGFC +NNVAVAA + E G+ K+LI
Sbjct: 176 LSLAVCTGQVRNAFAIVRPPGHHAEPDEHMGFCFFNNVAVAAREMQKE----GLAKKVLI 231
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
+DWDVHHGN TQ+ FW DP VL+ S+HRH+ G FYP++D G M+GEGPG G ++N+PW
Sbjct: 232 LDWDVHHGNGTQRAFWNDPNVLYISLHRHDGGKFYPSSDFGALDMVGEGPGEGKSVNIPW 291
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+G GD DY+ + I++P+A +F PD++IIS+GFDAA GD LG C VTP GY M
Sbjct: 292 PSGGFGDGDYIYAFQKIVMPIAYEFEPDLVIISSGFDAADGDHLGQCHVTPAGYGHMTHM 351
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
L A G++V+ALEGGYNL +IS+S LA VLL + P A + E+ V++ V K
Sbjct: 352 LSALAGGRLVVALEGGYNLRAISDSSLAVAQVLLGETP-AELTHVEASEAATEVVRQVAK 410
Query: 363 KLSAFWPTL 371
S +W ++
Sbjct: 411 VQSRYWKSV 419
>gi|242770238|ref|XP_002341938.1| histone deacetylase HdaA [Talaromyces stipitatus ATCC 10500]
gi|218725134|gb|EED24551.1| histone deacetylase HdaA [Talaromyces stipitatus ATCC 10500]
Length = 763
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 150/380 (39%), Positives = 215/380 (56%), Gaps = 19/380 (5%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG--------------IPQRCV 58
GL YD RM H P + HPE+P RI I+ ++ AG +P
Sbjct: 108 TGLCYDIRMRYHCEVRPAAEVHPEDPRRIYYIYKEICRAGLIEDLDIVSSPKPLVPMPLK 167
Query: 59 VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAA 118
++ + A + + VHT+ H + + + D + +SIY N + +A L+A
Sbjct: 168 RIDVRNATKEEVELVHTDEHFQFVSDTQNLP-DETLIMLEESRDSIYFNRLTFASALLSA 226
Query: 119 GSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN 178
G IE VA ++ +A A++RPPGHHAE D+ MGFCL+NNV++AA + E
Sbjct: 227 GGAIETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSIAAKVCQRKLGE-ACR 285
Query: 179 KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNI 238
KILIVDWDVHHGN QK F+ +P VL+ S+H + G FYP +G + +GEG GLG NI
Sbjct: 286 KILIVDWDVHHGNGIQKAFYDEPNVLYISLHVYADGKFYPGGKEGNWDAVGEGAGLGKNI 345
Query: 239 NVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSV 298
N+PW + GD DY+ + +++P+A +F PD++I+++GFDAAAGD LGGC VTP YS
Sbjct: 346 NIPWPSQGMGDGDYMFAFQQVIMPIASEFDPDLVIVASGFDAAAGDELGGCFVTPACYSH 405
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQ 358
M LM A GK+ + LEGGYN SIS S LA L+ + P A + P +V++
Sbjct: 406 MTHMLMTLANGKVSVCLEGGYNFRSISKSALAVTKTLMGEPP-ARLAATMPSNPAVQVVR 464
Query: 359 AVRKKLSAFWPTLADELPTK 378
V S +W + ++PT+
Sbjct: 465 TVMAAQSKYWRCMYPKIPTQ 484
>gi|327279554|ref|XP_003224521.1| PREDICTED: histone deacetylase 7-like [Anolis carolinensis]
Length = 931
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/346 (43%), Positives = 215/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 502 TGIVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQS 561
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEGSSEAAY 115
VHTE HV L + ++A L ++I+ SS AA
Sbjct: 562 VHTERHVLLYGTNPLSRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAAR 621
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV E+A +VA +L + FA+VRPPGHHA+P AMGFC +N+VA+AA L +
Sbjct: 622 WAAGSVTELAFKVASRQLKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKG--- 678
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
INKILIVDWDVHHGN TQ++F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 679 KINKILIVDWDVHHGNGTQQVFYRDPNVLYISLHRHDNGNFFPGS--GAADEVGSGAGEG 736
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
+ +NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG +
Sbjct: 737 FTVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAREFCPDVVLVSAGFDAAEGHPPPLGGYK 796
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
V+P + M ++LM+ A G +VLALEGG++L +I ++ AC++ LL
Sbjct: 797 VSPKCFGYMTQQLMNVAGGALVLALEGGHDLTAICDASEACVSALL 842
>gi|195131949|ref|XP_002010406.1| GI15905 [Drosophila mojavensis]
gi|193908856|gb|EDW07723.1| GI15905 [Drosophila mojavensis]
Length = 1224
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/395 (40%), Positives = 231/395 (58%), Gaps = 36/395 (9%)
Query: 3 VKSGEGRTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVL 60
V+SG K GL YD M KH GD HPE+ R++++W +L + +RC L
Sbjct: 785 VESGLPAHKKITTGLAYDPLMLKHACICGDNAPHPEHSGRLQSVWARLNETDLVKRCDRL 844
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL-------------- 106
A++A + L +VHTE H L S Q R ++ S L++ ++
Sbjct: 845 RARKATQEELQTVHTEAHAMLF---GSNQGQLTRPKLESTLSASFVRLSCGGLGVDLDTT 901
Query: 107 -NEG-SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
NE ++ AA +AAG VI++A + A+GEL + FA+VRPPGHHAE + AMGFC +N++A+A
Sbjct: 902 WNEHHTATAARMAAGCVIDLAFKTAKGELRNGFAVVRPPGHHAEANLAMGFCFFNSIAIA 961
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGF 224
A L PE+ +ILI DVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G
Sbjct: 962 AKLLRQRVPEM--KRILI---DVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GG 1014
Query: 225 YTMIGEGPGLGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAA 281
T G G GLGYN+N+ W N GDA+Y+A + +++P+AK F PDI+++S+GFDAA
Sbjct: 1015 PTECGSGAGLGYNVNISWSGALNPPLGDAEYIAAFRTVVMPIAKCFNPDIVLVSSGFDAA 1074
Query: 282 AGD--PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED- 338
G PLGG V+P + +M ++L+ A GK+VLALEGGY+L +I +S C+ LL D
Sbjct: 1075 TGHPAPLGGYHVSPACFGLMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDP 1134
Query: 339 -KPVAGSS-EAYPFESTWRVIQAVRKKLSAFWPTL 371
P+A S E P ++ +Q WP +
Sbjct: 1135 AAPIAPSELERPPCQNAINTLQKTIAIQQTHWPCV 1169
>gi|395548130|ref|XP_003775206.1| PREDICTED: histone deacetylase 6 [Sarcophilus harrisii]
Length = 905
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/342 (44%), Positives = 209/342 (61%), Gaps = 7/342 (2%)
Query: 32 DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS-KQF 90
++HPE P RI I + G+ RCV L A+ A + LL+ H+E +++ I+ S K
Sbjct: 348 NHHPERPERIAHIAQRHLELGLTPRCVSLPARCATLRELLNCHSEEYIDRIRATSRLKPR 407
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD 150
D R+ NSIYL+ S A LAAG+ + E + GE+++ AIVRPPGHHAE D
Sbjct: 408 DLHRE--GENYNSIYLSSQSFACAQLAAGAACRLVEAILTGEVHNGLAIVRPPGHHAERD 465
Query: 151 EAMGFCLYNNVAVAASFLLNERPELGIN-KILIVDWDVHHGNSTQKMFWKDPRVLFFSVH 209
A GFC +N+VAVAA + + +G +ILIVDWD+HHGN TQ +F +DP VL+ S+H
Sbjct: 466 AACGFCFFNSVAVAAR---HAQDMVGRALRILIVDWDIHHGNGTQHIFEEDPSVLYVSLH 522
Query: 210 RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGP 269
R++ GTF+P +D +G G G G+ +NV W R GD+DYL+ HI++P+A +F P
Sbjct: 523 RYDHGTFFPMAEDAASKCVGRGRGEGFTVNVAWNGPRLGDSDYLSAMHHIVMPIAYEFNP 582
Query: 270 DIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVL 329
+++++SAGFDAA GDPLGGC V+P GY+ M LM A G + L LEGGYNL SIS+S+
Sbjct: 583 ELVLVSAGFDAARGDPLGGCLVSPEGYAHMTHLLMGLAGGHVALVLEGGYNLSSISDSMA 642
Query: 330 ACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
AC LL D P P T+ + V + +W L
Sbjct: 643 ACTRTLLGDPPPLFPWLRPPLPGTFVTLAEVAQVHQKYWQCL 684
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%)
Query: 258 HILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEG 317
H+LLP+A +F P+I++++AGFDA DP G VTP G++ + LM A+G+++L+LEG
Sbjct: 230 HVLLPIALEFQPEIVLVAAGFDAVLEDPKGEMAVTPGGFAHLTHLLMSLAKGRLILSLEG 289
Query: 318 GYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
GYNL S++ V A + LL D + P S + FW
Sbjct: 290 GYNLRSLALGVSATLQTLLGDPCPLLETPCIPCFSALESMSCTLAAQKPFW 340
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
I GL+ DERM P D PE P R++A+ +L + +RC+ + A+ A + L
Sbjct: 74 IPSGTGLVLDERMGSFRCPWDDSFPERPERLQAVQQQLSRDCLLERCIPIEAQPATPQEL 133
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
VH++ +V+L+ + RR ++ +S+YL+ S A LA G+++ + + +
Sbjct: 134 QLVHSQEYVDLMSSTPDMTQMERRA-LSDTYDSVYLHPNSFPCALLATGALLRLVDALMG 192
Query: 131 GELNSAFAIVRPPG 144
G++ + A+VR G
Sbjct: 193 GDIRNGLALVRESG 206
>gi|350633406|gb|EHA21771.1| histone deacetylase [Aspergillus niger ATCC 1015]
Length = 800
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 204/338 (60%), Gaps = 15/338 (4%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI---PQRCVVL--------NA 62
GL YD +M H P D HPE+P RI I+ +L AG+ P+ C L NA
Sbjct: 132 GLCYDVQMRYHCEVRPTADVHPEDPRRIYYIYKELCRAGLVDDPESCRPLVSRPLKRINA 191
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A + + +HT +H +++ + D + +SIY N+ + ++ L+ G I
Sbjct: 192 RNATEAEISLIHTPDHFAFVES-TKDMSDDELIALEHTRDSIYFNKLTFASSILSVGGAI 250
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV+VAA N R KILI
Sbjct: 251 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQN-RLGDSCRKILI 309
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
+DWDVHHGN QK F+ DP +L+ S+H ++ G FYP ++G + GEGPG+G N+N+PW
Sbjct: 310 LDWDVHHGNGIQKAFYDDPNILYISLHVYQDGKFYPGGEEGDWDHCGEGPGVGRNVNIPW 369
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GD DY+ + +++P+A +F PD++I+++GFDAAAGD LGGC VTP Y+ M
Sbjct: 370 PSQGMGDGDYMYAFQQVVMPIAHEFNPDLVIVASGFDAAAGDELGGCFVTPSCYAHMTHM 429
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
LM A GK+ + LEGGYN SIS S LA L+ D P
Sbjct: 430 LMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGDPP 467
>gi|317036036|ref|XP_001397497.2| histone deacetylase hda1 [Aspergillus niger CBS 513.88]
Length = 800
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 204/338 (60%), Gaps = 15/338 (4%)
Query: 16 GLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGI---PQRCVVL--------NA 62
GL YD +M H P D HPE+P RI I+ +L AG+ P+ C L NA
Sbjct: 132 GLCYDVQMRYHCEVRPTADVHPEDPRRIYYIYKELCRAGLVDDPESCRPLVSRPLKRINA 191
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A + + +HT +H +++ + D + +SIY N+ + ++ L+ G I
Sbjct: 192 RNATEAEISLIHTPDHFAFVES-TKDMSDDELIALEHTRDSIYFNKLTFASSILSVGGAI 250
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV+VAA N R KILI
Sbjct: 251 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQN-RLGDSCRKILI 309
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
+DWDVHHGN QK F+ DP +L+ S+H ++ G FYP ++G + GEGPG+G N+N+PW
Sbjct: 310 LDWDVHHGNGIQKAFYDDPNILYISLHVYQDGKFYPGGEEGDWDHCGEGPGVGRNVNIPW 369
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GD DY+ + +++P+A +F PD++I+++GFDAAAGD LGGC VTP Y+ M
Sbjct: 370 PSQGMGDGDYMYAFQQVVMPIAHEFNPDLVIVASGFDAAAGDELGGCFVTPSCYAHMTHM 429
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
LM A GK+ + LEGGYN SIS S LA L+ D P
Sbjct: 430 LMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGDPP 467
>gi|358368190|dbj|GAA84807.1| histone deacetylase Hda1 [Aspergillus kawachii IFO 4308]
Length = 798
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 204/338 (60%), Gaps = 15/338 (4%)
Query: 16 GLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGI---PQRCVVL--------NA 62
GL YD +M H P D HPE+P RI I+ +L AG+ P+ C L NA
Sbjct: 130 GLCYDVQMRYHCEVRPTADVHPEDPRRIYYIYKELCRAGLVDDPESCRPLVSRPLKRINA 189
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A + + +HT +H +++ + D + +SIY N+ + ++ L+ G I
Sbjct: 190 RNATEAEISLIHTPDHFAFVES-TKDMSDDELIALEHTRDSIYFNKLTFASSILSVGGAI 248
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV+VAA N R KILI
Sbjct: 249 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQN-RLGDSCRKILI 307
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
+DWDVHHGN QK F+ DP +L+ S+H ++ G FYP ++G + GEGPG+G N+N+PW
Sbjct: 308 LDWDVHHGNGIQKAFYDDPNILYISLHVYQDGKFYPGGEEGDWDHCGEGPGVGRNVNIPW 367
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GD DY+ + +++P+A +F PD++I+++GFDAAAGD LGGC VTP Y+ M
Sbjct: 368 PSQGMGDGDYMYAFQQVVMPIAHEFNPDLVIVASGFDAAAGDELGGCFVTPSCYAHMTHM 427
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
LM A GK+ + LEGGYN SIS S LA L+ D P
Sbjct: 428 LMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGDPP 465
>gi|328699049|ref|XP_001942623.2| PREDICTED: histone deacetylase 6-like [Acyrthosiphon pisum]
Length = 839
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 218/359 (60%), Gaps = 6/359 (1%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
I +V + +D M + + HPE P RI AI N + R ++L ++EA++ L
Sbjct: 466 INNKVCVSFDLIMDQKHESSESGHPECPGRISAILNMYNEFQLTHRLLILPSREAEESEL 525
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L H+ HV+ + N+ K S +S+YL + + + LA+G +++V + V +
Sbjct: 526 LLAHSREHVDEMSNLH-KLSPSELSEKEKCYDSVYLTTDTYKVSTLASGCLLQVVDSVMK 584
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
E S A++RPPGHHAE D A GFC++N+VA+AAS+ LN+ G+ +I+I+DWD+H G
Sbjct: 585 NESASGVAVIRPPGHHAELDIACGFCIFNSVAIAASYALNK---YGLKRIMILDWDIHFG 641
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N T + F DPRVL+ S+HR++ F+P +++G + + G G G GY IN+PW GDA
Sbjct: 642 NGTMRAFSSDPRVLYISIHRYQNAKFFPCSEEGSHKVTGSGSGEGYTINIPWNKNGMGDA 701
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
+Y++V +I+LPVA +F P+++++SAGFDAA GDPLGGC+VTP Y + L A GK
Sbjct: 702 EYISVMQNIILPVAYEFCPELVLVSAGFDAAVGDPLGGCKVTPECYGHLTHFLSSLANGK 761
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPF-ESTWRVIQAVRKKLSAFW 368
I+LALEGGYN+ ++S + C LL D P+ +P ++ + I+ V +W
Sbjct: 762 IILALEGGYNIDAVSYCMTMCTKALLGD-PLPPLDLEFPICKNAQKTIKRVVNVQKNYW 819
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 209/356 (58%), Gaps = 3/356 (0%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+ G++YD++ H +PENP R ++I + G+ +RC+ + + A + LL
Sbjct: 53 KSTGIIYDDQFANHLCAWDINYPENPQRYESIIERCNELGLIERCIKIQCRNATNDELLM 112
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
H+++ ++++K+ Q ++SK ++IY + + + + LA GS IE+ + + E +
Sbjct: 113 KHSQSIIDILKSTDDIQSVDLLQTLSSKFDAIYFHPSTYKQSLLATGSSIELVKAICENK 172
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A +RPPGHHA E G+C +NN+A+ A ++L ++KILIVDWDVHHG S
Sbjct: 173 IQNGMAFIRPPGHHAMKSEFCGYCFFNNIAITAEYVLRH---YSVSKILIVDWDVHHGQS 229
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ+MF+ DPRVL+FS+HR+E G F+P + + G G G G+NINVP D DY
Sbjct: 230 TQQMFYDDPRVLYFSIHRYEHGQFWPNLRESDWDYTGNGDGQGFNINVPLNATGMRDTDY 289
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
LA++ ILLPVA +F PD+I+IS+G+DAA G P G VTP Y+ ++ LM FA G++
Sbjct: 290 LAIFHQILLPVASEFQPDLILISSGYDAALGCPEGEMEVTPACYAHLVHSLMGFACGRVA 349
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
+ LEGGY L S++ + LL D + + P S + IQ V +W
Sbjct: 350 VLLEGGYCLKSLAEGAALTLKSLLGDPCPSLDMTSNPCTSIIQTIQNVIFAHQKYW 405
>gi|82884146|gb|ABB92849.1| histone deacetylase 4 [Danio rerio]
Length = 1023
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/418 (38%), Positives = 249/418 (59%), Gaps = 32/418 (7%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 599 TGLVYDTLMQKHQCMCGNSNIHPEHAGRIQSIWSRLQETGLRGQCECIRGRKATLEELQT 658
Query: 73 VHTENHVNLI-KNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSVI 122
VH+E HV L N ++ DS + +L ++I+ SS AA LA GSV+
Sbjct: 659 VHSEAHVLLYGTNPLRQKLDSSVTPMFVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVV 718
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
++ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++KILI
Sbjct: 719 DLVFKVASGELRNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LNVSKILI 775
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+ +
Sbjct: 776 VDWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGS--GAPDEVGIGPGVGFNVNMAF 833
Query: 243 ENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYS 297
G GDADYLA + +++P+A +F PD++++S+GFDA G PLGG ++T +
Sbjct: 834 TGGLEPPMGDADYLAAFTSVVMPIANEFSPDVVLVSSGFDAVEGHPPPLGGYKLTAKCFG 893
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVI 357
+ K+LM A G++VLALEGG++L +I ++ AC++ LL ++ + I
Sbjct: 894 YLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELDPIPEDILQQRPNANAI 953
Query: 358 QAVRKKL---SAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVA 412
Q++ K L S +W +L + T SL+ + E+E+ + T A L VA
Sbjct: 954 QSMEKVLEVQSKYWRSLQRSVSTLGYSLR-------EAQRCENEEAETVTAMASLSVA 1004
>gi|348541327|ref|XP_003458138.1| PREDICTED: histone deacetylase 4-like [Oreochromis niloticus]
Length = 1111
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 231/374 (61%), Gaps = 25/374 (6%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 686 TGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETGLRAQCECIRGRKATLEELQT 745
Query: 73 VHTENHVNLI-KNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSVI 122
VH+E HV L N ++ D + +L ++I+ SS AA LA GSV+
Sbjct: 746 VHSEAHVLLYGTNPLRQKLDCSITPMFVRLPCGGVGVDSDTIWNEVHSSSAARLAVGSVV 805
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L +NKILI
Sbjct: 806 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LNVNKILI 862
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQ+ F+ DP VL+ SVHR++ G F+P + G +G GPG+G+N+NV +
Sbjct: 863 VDWDVHHGNGTQQAFYDDPNVLYISVHRYDDGNFFPGS--GAPDEVGSGPGVGFNVNVAF 920
Query: 243 ENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYS 297
G GDA+YLA + +++P+A +F PDI+++S+GFDA G PLGG +T +
Sbjct: 921 TGGLDPPMGDAEYLAAFRSVVMPIANEFAPDIVLVSSGFDAVEGHPPPLGGYTLTSKCFG 980
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFESTW 354
+ ++LM A G++VLALEGG++L +I ++ AC+ LL E P+ + E P +
Sbjct: 981 YLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVAALLSQELDPLPKAVLEQRPNPNAV 1040
Query: 355 RVIQAVRKKLSAFW 368
R ++ V + S +W
Sbjct: 1041 RSLEKVLETHSKYW 1054
>gi|212541901|ref|XP_002151105.1| histone deacetylase HdaA [Talaromyces marneffei ATCC 18224]
gi|210066012|gb|EEA20105.1| histone deacetylase HdaA [Talaromyces marneffei ATCC 18224]
Length = 780
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/380 (39%), Positives = 215/380 (56%), Gaps = 19/380 (5%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI--------------PQRCV 58
GL YD RM H P + HPE+P RI I+ ++ AG+ P
Sbjct: 124 TGLCYDIRMRYHCEVRPAAEVHPEDPRRIYYIYKEICRAGLVEDPDIVATPRMLAPVPLK 183
Query: 59 VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAA 118
++A+ A + + VHT+ H + + + D + +SIY N + +A L+A
Sbjct: 184 RIDARNATKEEVELVHTDEHYQFVSDTQNLP-DETLIMLEETRDSIYFNRLTYASALLSA 242
Query: 119 GSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN 178
G IE VA ++ +A A++RPPGHHAE D+ MGFCL+NNV++AA + E
Sbjct: 243 GGAIETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSIAAKVCQRQLGE-ACR 301
Query: 179 KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNI 238
KILIVDWDVHHGN QK F+ DP VL+ S+H + G FYP +G + +GE GLG NI
Sbjct: 302 KILIVDWDVHHGNGIQKAFYDDPNVLYMSLHVYADGKFYPGGKEGNWDHVGEVAGLGKNI 361
Query: 239 NVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSV 298
N+PW + GD DY+ + +++P+A +F PD++I+++GFDAAAGD LGGC VTP YS
Sbjct: 362 NIPWPSQGMGDGDYMYAFQQVVMPIATEFDPDLVIVASGFDAAAGDELGGCFVTPACYSH 421
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQ 358
M LM A GK+ + LEGGYN SIS S LA L+ + P A + P +V++
Sbjct: 422 MTHMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGEPP-ARLAATTPSNPAVQVVR 480
Query: 359 AVRKKLSAFWPTLADELPTK 378
V S +W + ++PT+
Sbjct: 481 TVMAAQSKYWRCMYPKIPTQ 500
>gi|443921209|gb|ELU40937.1| histone deacetylase complex protein [Rhizoctonia solani AG-1 IA]
Length = 848
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 226/421 (53%), Gaps = 54/421 (12%)
Query: 14 RVGLLYDERMCKH-------NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
R G YD M H + P+ ++HPE P RI I L + +R + ++ +
Sbjct: 57 RTGYCYDSAMTMHTQHGVDPDDPESEHHPEKPQRITCIRAILANNRLLERMHQIPIRQVR 116
Query: 67 DKNLLSVHTENHVNLIKNIS-----SKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSV 121
++ VHT + V+ + + + + ++ + +L S+Y+ + +S+AA L+ G V
Sbjct: 117 TNEVMLVHTRDLVDKVAGLERSIAMTNEHITQTAQFYEQL-SLYVTQATSQAAALSCGGV 175
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
IE A VA G++ ++FAIVRPPGHHAEPDE MGFC YNNVAVA + NE P + ++L
Sbjct: 176 IECALAVARGQVRNSFAIVRPPGHHAEPDEHMGFCFYNNVAVATRVVFNETP---VKRVL 232
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
I+DWDVHHGN TQ F DP VL+ S+HR++ G FYP G +G G G G ++N+P
Sbjct: 233 ILDWDVHHGNGTQLAFEDDPNVLYISIHRYDGGEFYPGGTYGSMNSVGLGAGKGKSVNIP 292
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDII------------------IISAGFDAAAG 283
W G GDADY+ + +I++P+A +F P+++ I+SAGFDAAAG
Sbjct: 293 WPEGHMGDADYMYAFLNIVMPIAYEFAPELVFSTLFYSLAPSIKCSSNLIVSAGFDAAAG 352
Query: 284 DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG 343
D LG C VTP Y+ M L A GK+V+ALEGGYNL SI+ S LA LL D P+
Sbjct: 353 DTLGNCEVTPECYAHMTALLSTLAGGKLVVALEGGYNLDSIAKSALAVTRALLGD-PLPE 411
Query: 344 SSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVE 403
E V+ V + S +W H I +S E DT E
Sbjct: 412 LPRLDASEIATEVVWQVARIQSQYW-------------------HCIQASSLEPSDTIDE 452
Query: 404 T 404
T
Sbjct: 453 T 453
>gi|116175247|ref|NP_001034447.2| histone deacetylase 4 [Danio rerio]
gi|115528766|gb|AAI24584.1| Zgc:152701 [Danio rerio]
gi|182889818|gb|AAI65681.1| Zgc:152701 protein [Danio rerio]
Length = 1023
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/418 (38%), Positives = 249/418 (59%), Gaps = 32/418 (7%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 599 TGLVYDTLMQKHQCMCGNSNIHPEHAGRIQSIWSRLQETGLRGQCECIRGRKATLEELQT 658
Query: 73 VHTENHVNLI-KNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSVI 122
VH+E HV L N ++ DS + +L ++I+ SS AA LA GSV+
Sbjct: 659 VHSEAHVLLYGTNPLRQKLDSSVTPMFVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVV 718
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
++ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++KILI
Sbjct: 719 DLVFKVASGELRNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LNVSKILI 775
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+ +
Sbjct: 776 VDWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGS--GAPDEVGIGPGVGFNVNMAF 833
Query: 243 ENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYS 297
G GDADYLA + +++P+A +F PD++++S+GFDA G PLGG ++T +
Sbjct: 834 TGGLEPPMGDADYLAAFRSVVMPIANEFSPDVVLVSSGFDAVEGHPPPLGGYKLTAKCFG 893
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVI 357
+ K+LM A G++VLALEGG++L +I ++ AC++ LL ++ + I
Sbjct: 894 YLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELDPIPEDILQQRPNANAI 953
Query: 358 QAVRKKL---SAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVA 412
Q++ K L S +W +L + T SL+ + E+E+ + T A L VA
Sbjct: 954 QSMEKVLEVQSKYWRSLQRSVSTLGYSLR-------EAQRCENEEAETVTAMASLSVA 1004
>gi|321474949|gb|EFX85913.1| hypothetical protein DAPPUDRAFT_98501 [Daphnia pulex]
Length = 721
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/358 (38%), Positives = 215/358 (60%), Gaps = 4/358 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G++YD+RM H + E P R + + + + QRC+ L +EA ++ LL +H
Sbjct: 3 TGVVYDQRMADHKCLWDLKYNEKPERFINVLKRCEELKLLQRCLPLKPREATEEELLKLH 62
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
T + ++++K+ S + ++++SK + +Y++ + + + LAAGS +E+ + +G++
Sbjct: 63 TPDMISILKDTDSISDEEALEKLSSKYDFLYIHPSTYQLSLLAAGSTVELVSNILDGKIR 122
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA E G+C YNNVA+A L+ R G+ +ILIVDWD+HHG +TQ
Sbjct: 123 NGMAIIRPPGHHAMKSEYCGYCFYNNVAIATQHALDNR---GLKRILIVDWDIHHGQATQ 179
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+MF+ DPRVL+FS+H + G F+P + Y IG G GLGYNINVP + G++DY+A
Sbjct: 180 QMFYDDPRVLYFSIHGFQNGAFWPHLRESDYHNIGRGAGLGYNINVPMNEVKMGNSDYMA 239
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
++ +LLP+A +F P++II+SAG+DAA G P G +TP YS LM A G++ +
Sbjct: 240 IFHQLLLPIAYEFNPELIIVSAGYDAALGCPEGEMEITPACYSHFTNSLMGLANGRLAVV 299
Query: 315 LEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY L S+S + LL D P S+ P +S + +V L +W L
Sbjct: 300 LEGGYCLKSLSEGAALTLRTLLGDPCPPLLSNLDTPTKSAQNTVLSVMYVLRRYWKCL 357
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 29/233 (12%)
Query: 159 NNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYP 218
N V + + +++R + ++ +D H QK F +D R+L+ S+ +
Sbjct: 496 NIVIDSLKYAIDDR---SLQNVMFIDMRTHPDREIQKFFQEDVRILYASL--------FA 544
Query: 219 ANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
D +G + +NV + CGD D L+ ILLPVA FGP +I++
Sbjct: 545 FLDSCGSESVGAKK---FTVNVGLQQS-CGDGDVLSALFRILLPVAYQFGPQLIVV---- 596
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
AA P GG +G + L L + G++ + + + S + + C+ LL D
Sbjct: 597 -AADRSPSGGVSSECFGQVIHL--LTSLSGGRLAVIFKHNKDPSSSLSGLKICVKALLGD 653
Query: 339 KPVA-----GSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPP 386
P++ G+++ S + +R++ +AFW L E+ ++ PP
Sbjct: 654 -PISMSTPKGTNQQLNVVSMCAIRNVIREQ-NAFWNALQFEVQVPDINVLIPP 704
>gi|239614851|gb|EEQ91838.1| histone deacetylase [Ajellomyces dermatitidis ER-3]
Length = 806
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/341 (43%), Positives = 206/341 (60%), Gaps = 19/341 (5%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----PQRCVV------LN 61
GL YD RM H P D HPE+P RI I+ +L AG+ R +V +
Sbjct: 142 TGLCYDIRMRYHCEVKPTLDVHPEDPRRIYYIYKELCKAGLVDDPESSRPLVSLPLQRIG 201
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAG 119
A+EA ++ + VH H + +K S ++ S + IA +SIY N + ++ L+ G
Sbjct: 202 AREATEEEISLVHDTEHYDFVK---STKYMSEEELIALEHTRDSIYFNSLTFTSSILSCG 258
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
IE + V G++ +A A++RPPGHHAE ++ MGFCL+NNV VAA E E K
Sbjct: 259 GAIETCKAVVSGQVKNAIAVIRPPGHHAEQNKTMGFCLFNNVCVAARVCQREFGE-KCRK 317
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
ILI+DWDVHHGN QK F+ DP +L+ S+H + G+FYP ++G + GEG GLG NIN
Sbjct: 318 ILILDWDVHHGNGVQKAFYDDPNILYISLHVYRDGSFYPGGEEGNWDHCGEGNGLGKNIN 377
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+PW GD DY+ + +++P+A +F PD++IISAGFDAAAGD LGGC VTP Y+ M
Sbjct: 378 IPWPTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYAHM 437
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
+ LM+ A GK+ + LEGGYN SIS S LA L+ + P
Sbjct: 438 TRMLMNVAGGKVAVCLEGGYNFRSISKSALAVTRTLMGEPP 478
>gi|328717398|ref|XP_001942814.2| PREDICTED: histone deacetylase 6-like [Acyrthosiphon pisum]
Length = 733
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/355 (38%), Positives = 223/355 (62%), Gaps = 8/355 (2%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
G++YD+ H + + ENP R ++ ++ + G+ RC+ +++++A + LLS HT
Sbjct: 3 GVVYDDNFITHKCLWDENYSENPQRYISVLDRCNSLGLINRCIKISSRQATKEELLSKHT 62
Query: 76 ENHVNLIKNISSKQF-DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
H++L++ S++ + D + ++ +S+ +SIY++ + + LAAGS IE+ + V +G +
Sbjct: 63 VEHIDLLE--STEHYNDEKLEKFSSRYDSIYVHNSTYRQSLLAAGSSIELVKAVVDGRIQ 120
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A VRPPGHHA E G+C NNVA+A +LL++ I KILIVDWD+HHG +TQ
Sbjct: 121 NGMAFVRPPGHHAMESEYSGYCFINNVAIATQYLLDKT---AIQKILIVDWDIHHGQATQ 177
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+MF++DPRVL+FS+HR+E G F+P + + +G G G G+N+NVP + + DY+A
Sbjct: 178 QMFYEDPRVLYFSIHRYEHGQFWPNLRESDFDHVGNGSGTGFNVNVPLNDTGMKNEDYMA 237
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ ++L+P+A +F PD+II+S+G+D+A GDP G VTP Y+ + +KLM + G++V
Sbjct: 238 IIHYLLIPLATEFSPDLIIVSSGYDSAIGDPKGEMLVTPACYAHITQKLMSLSCGRVVAI 297
Query: 315 LEGGYNLGSISNSVLACMNVLLEDK-PVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
LEGGY L S++ S + LL D PV GS + P +S I V +W
Sbjct: 298 LEGGYYLKSLAESAALTLRALLGDPCPVIGSLKQ-PCKSVMETIGNVIYAHRHYW 351
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 124/271 (45%), Gaps = 34/271 (12%)
Query: 82 IKNISSKQFDSRRDRIASKL-NSIYLNEGSSEAAY-LAAGSVIEVAERVAEGELNSAFAI 139
IK I +KQ + K+ N+ Y+ + + +AG ++++ + + E E+ S I
Sbjct: 465 IKEILNKQKSIDEKKCTIKIINNEYIEDNPMFNTFSFSAGPLLQIIDSIFENEIKSG--I 522
Query: 140 VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWK 199
+ +E C N + A++ + + + +ILI++ + N TQ +
Sbjct: 523 FVSSISNLNKNEVS--CTLNASIIGANYAI---KKYFLKRILIIELN---ENVTQ--IYS 572
Query: 200 DPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN--INVPWENGRCGDADYLAVWD 257
+ ++L S+H +++ + N IN+ W +A++ +
Sbjct: 573 NDQILVISMH----------------SLLNNSKAINENNHINISWSKKILNEAEFTTIVQ 616
Query: 258 HILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEG 317
H++LP+A ++ P++II+S+ F + + + G ++TP +++ L A G+++L +
Sbjct: 617 HLILPIAYEYNPELIIVSSTFYSNINNYINGIQMTPIMCGYLIQWLSTLANGRLILYEQD 676
Query: 318 GYNLGSISNS-VLACMNVLLEDKPVAGSSEA 347
++ N +L C LL +P++ S A
Sbjct: 677 AHDNSIHRNKCLLQCSKALL-GEPISQLSVA 706
>gi|296817495|ref|XP_002849084.1| histone deacetylase hda1 [Arthroderma otae CBS 113480]
gi|238839537|gb|EEQ29199.1| histone deacetylase hda1 [Arthroderma otae CBS 113480]
Length = 817
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/407 (38%), Positives = 224/407 (55%), Gaps = 43/407 (10%)
Query: 6 GEGRTIKRR---VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-------- 52
G R + R G YD RM H P D HPE+P R+ I+ +L AG
Sbjct: 121 GRSRALHRAQLPTGYCYDNRMRYHCEVKPTLDVHPEDPRRVYYIYRELGRAGLIADEGEF 180
Query: 53 ----IPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE 108
+PQ + A++A + + VHT+ H +KN D + + +SIY N
Sbjct: 181 QGSLVPQPLKRIEARDATEAEITLVHTKEHYEFVKNTKDMSEDELLE-LEQTRDSIYFNS 239
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASF- 167
+ +A L+ G IE + VAE ++ +A A++RPPGHHAE ++ MGFCL+NNV+VAA
Sbjct: 240 LTFTSALLSCGGAIETCKAVAEEKVKNAIAVIRPPGHHAESNKTMGFCLFNNVSVAARAC 299
Query: 168 --LLNERPELGINKILIVDW-------------DVHHGNSTQKMFWKDPRVLFFSVHRHE 212
+L ++ KI+I+DW DVHHGN Q+MF+ DP VL+ S+H +
Sbjct: 300 QKILGDK----CRKIMILDWSLDGTRADWTYNRDVHHGNGVQRMFYNDPNVLYISIHVYR 355
Query: 213 FGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDII 272
G+FYP D+G + GEG GLG N+N+PW GD DYL + +++P+ +F PD++
Sbjct: 356 DGSFYPGGDEGNWDYCGEGLGLGKNVNIPWPTQGMGDGDYLYAFQEVVMPIGYEFDPDLV 415
Query: 273 IISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACM 332
IISAGFDAAAGD LGGC VTP YS M + LM+ A GK+ + LEGGYN SIS S LA
Sbjct: 416 IISAGFDAAAGDELGGCFVTPPCYSHMTRMLMNLANGKVAVCLEGGYNFRSISKSALAVT 475
Query: 333 NVLLEDKP--VAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPT 377
L+ + P + S + P T R + + + +W + + P+
Sbjct: 476 RTLMGEPPDRLIAPSASRPAVETVREVAMMHAR---YWKCMYPKGPS 519
>gi|388582703|gb|EIM23007.1| hypothetical protein WALSEDRAFT_59725 [Wallemia sebi CBS 633.66]
Length = 697
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 218/362 (60%), Gaps = 6/362 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R G +YD M +H D D HPE P RI +I+ L + +R + +N++ + V
Sbjct: 55 RSGYVYDYEMTRHAPFDEDDHPEQPARITSIYESLNNSQCIKRMLKINSRNVTRAEVTLV 114
Query: 74 HTENH---VNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
H+ H VN++ I + + R + SIY+N ++ AA L+AGS++E+ + V +
Sbjct: 115 HSPEHWDRVNMLAFI--PEVELRALIPLHERMSIYVNPMTTYAALLSAGSLLELTKAVCD 172
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
+ + FAIVRPPGHHAEP++ MGF +NN ++AA + P + ++LI+DWDVHHG
Sbjct: 173 ERIRNGFAIVRPPGHHAEPEQMMGFSFFNNASIAARWAQKNYPN-SVKRVLILDWDVHHG 231
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ+ F+ DP VL+ S+HR+E GTFYP +D G M G G G G+++N+PW + GD
Sbjct: 232 NGTQRAFYDDPSVLYISLHRYENGTFYPGSDFGGMNMTGSGAGEGFSVNIPWPHAGMGDP 291
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
+YL ++ +++P++++F PD++IISAG+DAA DPLG +TP GY+ M +L A GK
Sbjct: 292 EYLQAFNQVVMPISQEFAPDLVIISAGYDAAINDPLGENLITPLGYAQMTHQLSSLAGGK 351
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPT 370
+V+ALEGGYNL SI+ S + LL + P + + + V S +W +
Sbjct: 352 MVVALEGGYNLDSIATSATSTTQTLLGEIPPQAPFNSVAKTTAMETLHDVCMVQSKYWKS 411
Query: 371 LA 372
++
Sbjct: 412 VS 413
>gi|261190666|ref|XP_002621742.1| histone deacetylase [Ajellomyces dermatitidis SLH14081]
gi|239591165|gb|EEQ73746.1| histone deacetylase [Ajellomyces dermatitidis SLH14081]
Length = 800
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/341 (43%), Positives = 206/341 (60%), Gaps = 19/341 (5%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----PQRCVV------LN 61
GL YD RM H P D HPE+P RI I+ +L AG+ R +V +
Sbjct: 136 TGLCYDIRMRYHCEVKPTLDVHPEDPRRIYYIYKELCKAGLVDDPESSRPLVSLPLQRIG 195
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAG 119
A+EA ++ + VH H + +K S ++ S + IA +SIY N + ++ L+ G
Sbjct: 196 AREATEEEISLVHDTEHYDFVK---STKYMSEEELIALEHTRDSIYFNSLTFTSSILSCG 252
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
IE + V G++ +A A++RPPGHHAE ++ MGFCL+NNV VAA E E K
Sbjct: 253 GAIETCKAVVSGQVKNAIAVIRPPGHHAEQNKTMGFCLFNNVCVAARVCQREFGE-KCRK 311
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
ILI+DWDVHHGN QK F+ DP +L+ S+H + G+FYP ++G + GEG GLG NIN
Sbjct: 312 ILILDWDVHHGNGVQKAFYDDPNILYISLHVYRDGSFYPGGEEGNWDHCGEGNGLGKNIN 371
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+PW GD DY+ + +++P+A +F PD++IISAGFDAAAGD LGGC VTP Y+ M
Sbjct: 372 IPWPTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYAHM 431
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
+ LM+ A GK+ + LEGGYN SIS S LA L+ + P
Sbjct: 432 TRMLMNVAGGKVAVCLEGGYNFRSISKSALAVTRTLMGEPP 472
>gi|350412722|ref|XP_003489740.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 4-like [Bombus
impatiens]
Length = 1023
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 245/436 (56%), Gaps = 55/436 (12%)
Query: 15 VGLLYDERMCKHNTPDGDY---HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
GL YD M KH G+ HPE+ R++++W +L G+ QRC + +++A + +
Sbjct: 583 TGLAYDPLMLKHACVCGETVRGHPEHGGRLQSVWARLSETGLLQRCDRIRSRKATLEEIQ 642
Query: 72 SVHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL-------------------NE-G 109
+ H+E H L ++ ++ D SKL+ + + NE
Sbjct: 643 TCHSEAHALLFGTNPMNRQKLD------VSKLSQLPIKSFVRLPCGGVGVDSDTTWNELN 696
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
++ AA +A G V+++A + A ++ + FA+VRPPGHHAE ++AMGFC +N+VA+AA L
Sbjct: 697 TAPAARMAVGCVVDLAFKTAMADIKNGFAVVRPPGHHAETNQAMGFCFFNSVAIAARLL- 755
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L I KILI+DWDVHHGN TQ+MF+ DPRVL+ S+HRH+ G F+P G T G
Sbjct: 756 --QQKLDIRKILILDWDVHHGNGTQQMFYDDPRVLYMSIHRHDEGNFFPGT--GGPTECG 811
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAG--FDAAAGD 284
G GLGYN+NV W G GDA+YLA + I++P+AK F P I+++SAG FDAA G
Sbjct: 812 AGEGLGYNVNVAWSGGLNPPMGDAEYLAAFRTIVMPIAKAFDPSIVLVSAGSRFDAAVGH 871
Query: 285 --PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVA 342
PLGG +V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D+P
Sbjct: 872 PAPLGGYKVSPACFGKMTQQLLGLANGKVVLALEGGYDLAAICDSAQECVRALLGDEPTQ 931
Query: 343 GSSEAYPFESTWRVIQAVRKKLS---AFWPTLADELPTKLTSLKAPPAHMISSSDSEDED 399
E + ++K ++ + WP + L A M + + E
Sbjct: 932 LREEELTRIPCQNAVDTLQKTIAVQMSHWPCV---------KLNAHTVSMSAIEAGQKER 982
Query: 400 TKVETLEAVLQVALSK 415
+ ET+ A+ +++ +
Sbjct: 983 DETETVSAMASLSMQQ 998
>gi|242012669|ref|XP_002427051.1| histone deacetylase 7A, putative [Pediculus humanus corporis]
gi|212511301|gb|EEB14313.1| histone deacetylase 7A, putative [Pediculus humanus corporis]
Length = 1002
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 229/385 (59%), Gaps = 35/385 (9%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL +D M KH GD HPE+ R++++W +L G+ RC L A++A + + S
Sbjct: 569 TGLAFDNLMLKHACVCGDNSSHPEHGGRLQSVWARLLETGLVARCDRLRARKATIEEIQS 628
Query: 73 VHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
H+E H L ++ ++ D ++IA+ ++ NE ++ AA
Sbjct: 629 CHSEAHALLFGTNPLNRQKLDI--NKIAALPIKCFVRLPCGGVGVDSDTTWNELHTAPAA 686
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
+A G V+++A + A G++ + FA+VRPPGHHAE +AMGFC +N+VA+AA LL +R
Sbjct: 687 RMAVGCVVDLAMKTAMGDMKNGFAVVRPPGHHAENSQAMGFCFFNSVAIAAK-LLQQR-- 743
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L + KILI DWDVHHGN TQ+MF+ DP VL+ SVHRH+ G F+P G T G G GL
Sbjct: 744 LRVRKILIFDWDVHHGNGTQQMFYDDPHVLYLSVHRHDDGNFFPGT--GGPTECGTGEGL 801
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGC 289
GYN+N+ + G GDA+YLA + I++P+AK F PDI+++SAGFDAAAG PLGG
Sbjct: 802 GYNVNIAFSGGLQPPMGDAEYLAAFRTIVMPIAKKFDPDIVLVSAGFDAAAGHPPPLGGY 861
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP 349
+V+ + M ++L++ A GK+VLALEGGY+L SI ++ C+ LL D P S E
Sbjct: 862 KVSASCFGHMTQELLNLADGKVVLALEGGYDLPSICDAAQECVRALLGDDPTPISEEELT 921
Query: 350 FESTWRVIQAVRKKLS---AFWPTL 371
+ ++K ++ WP L
Sbjct: 922 RPPCQAAVDTMQKTIAIQLTHWPCL 946
>gi|225579787|gb|ACN94067.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 543 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 602
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 603 HTRAHVNTVRRLLGRELKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 661
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 662 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 718
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 719 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 778
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 779 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 838
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 839 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 898
Query: 366 AFWPTL 371
W +L
Sbjct: 899 NHWRSL 904
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 112 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 171
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 172 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 231
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 232 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 288
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 289 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 348
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 349 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 408
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 409 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 467
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 468 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 525
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 526 ----ARLQVLRAETKLSVPSFKV 544
>gi|115443266|ref|XP_001218440.1| histone deacetylase clr3 [Aspergillus terreus NIH2624]
gi|114188309|gb|EAU30009.1| histone deacetylase clr3 [Aspergillus terreus NIH2624]
Length = 760
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 218/376 (57%), Gaps = 16/376 (4%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----PQRCVV------LNA 62
GL YD +M H P + HPE+P RI I+ +L AG+ R +V +NA
Sbjct: 125 GLCYDVQMRYHCEVRPTSEVHPEDPRRIYYIYKELCRAGLVDDPESSRPLVSRPLKRINA 184
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A ++ + VHT +H +++ + D + +SIY N+ + ++ L+ G I
Sbjct: 185 RNATEEEISLVHTPDHYAFVES-TKDMTDEELIALEHTRDSIYFNKLTFASSLLSVGGAI 243
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV+VAA N+ E KI+I
Sbjct: 244 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQNQLGE-SCRKIMI 302
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
+DWDVHHGN QK F+ DP VL+ S+H ++ G FYP D+G + G G G+G N+N+PW
Sbjct: 303 LDWDVHHGNGIQKAFYDDPNVLYISLHVYQEGRFYPGGDEGDWDHCGTGAGVGRNVNIPW 362
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GD DY+ + +++P+A++F PD++II++GFDAA GD LGGC VTP Y+ M
Sbjct: 363 KTQGMGDGDYMYAFQQVVMPIAQEFNPDLVIIASGFDAAVGDELGGCFVTPACYAHMTHM 422
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
LM A GK+ + LEGGYN SIS S LA L+ D P S P E V++ V
Sbjct: 423 LMTLANGKVAVCLEGGYNFRSISKSSLAVTKTLMGDPPDRLYSTT-PSEDATSVVRQVMM 481
Query: 363 KLSAFWPTLADELPTK 378
S +W + + P +
Sbjct: 482 IQSKYWSCMYPKGPQE 497
>gi|213408403|ref|XP_002174972.1| histone deacetylase clr3 [Schizosaccharomyces japonicus yFS275]
gi|212003019|gb|EEB08679.1| histone deacetylase clr3 [Schizosaccharomyces japonicus yFS275]
Length = 678
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 149/380 (39%), Positives = 227/380 (59%), Gaps = 15/380 (3%)
Query: 2 EVKSGEGRTIKRRVGLLYDERMCKHNTPDG-DYHPENPNRIKAIWNKLQAAG----IP-- 54
+V+ + + + GL YD RM H T D + HPE+P RI ++ ++ AG IP
Sbjct: 41 DVEEQKPDVLNMKSGLCYDPRMRFHATLDEVEDHPEDPRRILQVFEAIKEAGYVSAIPTA 100
Query: 55 -QRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI-ASKLN-SIYLNEGSS 111
+ + ++EA + +L VH+++ +++K S + SR + + K N S+Y N +
Sbjct: 101 RDAFIRIPSREATLEEILRVHSKDVYDMVK---SSETMSREELVNLEKTNDSLYFNNQTF 157
Query: 112 EAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNE 171
A LA+GS +E V G++ +AFAI+RPPGHH+EP+++ GFCL+NNVA+ A ++
Sbjct: 158 FCARLASGSAVETCNAVVNGKVKNAFAIIRPPGHHSEPNKSGGFCLFNNVAITARSMMAR 217
Query: 172 RPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEG 231
PE + ++LI+DWDVHHGN TQ F+ DP VL+ S+HR+E G FYP G GEG
Sbjct: 218 YPE-QVKRVLILDWDVHHGNGTQMAFYDDPNVLYISLHRYENGRFYPGTTYGSAENCGEG 276
Query: 232 PGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRV 291
GLG +N+PW D DY+ + +++P+ +F PD++IISAGFDAAAGDPLG C +
Sbjct: 277 EGLGKTVNIPWPCAGMSDGDYIYAFQKVVMPIGYEFNPDLVIISAGFDAAAGDPLGQCYL 336
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFE 351
TP Y+ M + L+ A+GK+ +++EGGY+L SIS + LA LL P A Y
Sbjct: 337 TPAAYAHMTQMLLGLAEGKLFVSMEGGYSLSSISTAGLAVAQTLLGIPP-AKLHTVYATA 395
Query: 352 STWRVIQAVRKKLSAFWPTL 371
+ ++ V + S +W +
Sbjct: 396 PAVKTVEEVTRIQSRYWKCM 415
>gi|328718332|ref|XP_001945475.2| PREDICTED: histone deacetylase 4-like isoform 1 [Acyrthosiphon pisum]
gi|328718334|ref|XP_003246454.1| PREDICTED: histone deacetylase 4-like isoform 2 [Acyrthosiphon pisum]
Length = 1055
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 226/383 (59%), Gaps = 31/383 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL +D M KH G+ HPE+ R++++W +L G+ +RC L ++A + L +
Sbjct: 624 TGLAFDSLMLKHACKCGNNAIHPEHSGRLQSVWARLIETGLARRCDKLRPRKATIEELQT 683
Query: 73 VHTENHVNLI-KNISSKQ-FDSRR--------------DRIASKLNSIYLNEGSSEAAYL 116
HTE H L N++S+Q DS + + ++ + ++ AA +
Sbjct: 684 CHTEPHTLLFGTNLASRQKMDSSKLAELPVKALVRLPCGGLGVDSDTTWNELHTAPAARM 743
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
A G VI++A + A G++ + FAIVRPPGHHAE ++AMGFC +N++AVA L +
Sbjct: 744 AVGCVIDLAFKAALGDIKNGFAIVRPPGHHAEANQAMGFCFFNSIAVACRLLQQRQ---A 800
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
+ +ILIVDWDVHHGN TQ++F+ D VL+ S+HRH+ G F+P G G G GLGY
Sbjct: 801 VRRILIVDWDVHHGNGTQQIFYDDRSVLYLSIHRHDEGNFFPGT--GAPGECGAGSGLGY 858
Query: 237 NINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRV 291
N+N+ W G GDA+YLA + +++P+A+D+ P+II++SAGFDAA+G PLGG V
Sbjct: 859 NVNIAWSGGLQPPLGDAEYLAAFRTVVMPIARDYAPEIILVSAGFDAASGHPAPLGGYNV 918
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS-EAY 348
TP ++ M ++LM A GK++L+LEGGY+L +I +S C+ LLED P+ S
Sbjct: 919 TPACFAYMTQQLMQIADGKVILSLEGGYDLTAICDSAEECVRALLEDDVTPIVQSELHRT 978
Query: 349 PFESTWRVIQAVRKKLSAFWPTL 371
P ++ + +Q WP L
Sbjct: 979 PCQNAIKTLQKTIAIQLPHWPVL 1001
>gi|225579783|gb|ACN94063.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 533 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 592
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 593 HTRAHVNTVRRLLGRELKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 651
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 652 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 708
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 709 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 768
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 769 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 828
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 829 CLEGGYNVNSISYAMTMCTKTLLGD 853
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 102 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 161
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 162 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 221
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 222 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 278
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 279 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 338
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 339 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 398
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 399 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 457
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 458 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 515
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 516 ----ARLQVLRAETKLSVPSFKV 534
>gi|384875346|gb|AFI26266.1| HDAC4 [Drosophila melanogaster]
Length = 1181
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/386 (38%), Positives = 226/386 (58%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 748 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 807
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 808 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 864
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 865 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 924
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDW GN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 925 E--VRRILIVDWXXXXGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 980
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 981 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1040
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1041 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1100
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1101 ERPPCQNAINTLQKTIAIQXTHWPCV 1126
>gi|225579786|gb|ACN94066.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 540 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 599
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 600 HTRAHVNTVRRLLGRELKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 658
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 659 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 715
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 716 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 775
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 776 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 835
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 836 CLEGGYNVNSISYAMTMCTKTLLGD 860
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 109 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 168
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 169 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 228
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 229 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 285
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 286 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 345
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 346 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 405
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 406 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 464
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 465 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 522
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 523 ----ARLQVLRAETKLSVPSFKV 541
>gi|432859979|ref|XP_004069331.1| PREDICTED: histone deacetylase 7-like [Oryzias latipes]
Length = 1001
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 249/420 (59%), Gaps = 33/420 (7%)
Query: 5 SGEGRTIKRR--VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVL 60
S G +K R GL YD +M +H GD HPE+ RI+++W++L G+ +C +
Sbjct: 564 SNAGSDVKLRFTTGLAYDSQMQRHQCSCGDNSRHPEHSGRIQSVWSRLNERGLKNQCECI 623
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIAS---------------KLNSIY 105
+++A + L S+H+E HV+L N + + ++ +++++
Sbjct: 624 QSRKATAEELQSIHSEKHVHLFGNDTLSRLKQDNHKLTGPQPLFVLLPCGGVGVDIDTVW 683
Query: 106 LNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA 165
++ A+ +AAG VI++A +VA+ EL + FA+VRPPGHHA +GFC +N+VA+AA
Sbjct: 684 NEHHTAAASRIAAGCVIDLALKVAQRELRNGFAVVRPPGHHATHSSPLGFCFFNSVAIAA 743
Query: 166 SFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFY 225
L + +L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G
Sbjct: 744 KQL---QSKLNVSKILIVDWDVHHGNGTQEAFYDDPSVLYISLHRYDDGNFFPGS--GNP 798
Query: 226 TMIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAA 282
+G G G G+N+NV W G GDA YLA + +++P+A +F P+++++SAGFDA
Sbjct: 799 NEVGSGEGKGFNVNVGWMGGLNPPMGDAKYLAAFRAVVMPIAHEFSPEVVLVSAGFDAVE 858
Query: 283 GDP--LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--ED 338
G LGG +VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL E
Sbjct: 859 GHSAALGGYKVTAKCFGFLTRQLMSLAGGRVVLALEGGHDLKAICDASEACVSALLGMEV 918
Query: 339 KPVAGSS-EAYPFESTWRVIQAVRKKLSAFWPTLADELPT-KLTSLKAPPAHMISSSDSE 396
+P++ S + P E+ R +Q V + FW ++ D T L+ L+A + SDSE
Sbjct: 919 EPLSQSVLDQKPCENAVRSLQRVIQVQGEFWQSVRDSAATVDLSYLQAQRQRLRRDSDSE 978
>gi|301612382|ref|XP_002935701.1| PREDICTED: histone deacetylase 4 [Xenopus (Silurana) tropicalis]
Length = 974
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 151/346 (43%), Positives = 216/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH GD HPE+ RI++IW++LQ G+ C + ++A + L S
Sbjct: 538 TGIVYDSVMLKHQCTCGDNSNHPEHAGRIQSIWSRLQERGLRNNCECIRGRKATLEELQS 597
Query: 73 VHTENHVNL--IKNISSKQFDSRR------DRIASKL---------NSIYLNEGSSEAAY 115
VHTE HV L ++ + D+R+ R+ L ++I+ SS AA
Sbjct: 598 VHTETHVLLYGTNPLNRLKLDNRKLAGILSQRMFVMLPCGGLGVDSDTIWNELHSSNAAR 657
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSVI++A +VA EL + FA+VRPPGHHA+P AMGFC +N+VA+AA L R
Sbjct: 658 WAAGSVIDLAFKVASRELKNGFALVRPPGHHADPSTAMGFCFFNSVAIAAKQLQLRR--- 714
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ KILIVDWDVHHGN TQ++F+ DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 715 DVRKILIVDWDVHHGNGTQRVFYTDPNVLYISLHRHDDGNFFPGS--GAADEVGAGNGEG 772
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YL + +++P+A +F PD++++SAGFDAA G PLGG +
Sbjct: 773 FNVNVAWTGGLDPPMGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAAEGHPAPLGGYK 832
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + M ++LM A G++VLALEGG++L SI ++ AC++ LL
Sbjct: 833 VTAKCFGHMTRQLMSLAGGRVVLALEGGHDLTSICDASEACVSALL 878
>gi|384875345|gb|AFI26265.1| HDAC4 [Drosophila melanogaster]
Length = 1252
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 150/386 (38%), Positives = 226/386 (58%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 819 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 878
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 879 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 935
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 936 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 995
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDW GN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 996 E--VRRILIVDWXXXXGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1051
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 1052 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1111
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1112 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1171
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1172 ERPPCQNAINTLQKTIAIQXTHWPCV 1197
>gi|240280940|gb|EER44443.1| histone deacetylase hda1 [Ajellomyces capsulatus H143]
Length = 781
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 214/372 (57%), Gaps = 26/372 (6%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-----------IPQRCVVLN 61
GL YD RM H P D HPE+P RI I+ +L AG +PQ ++
Sbjct: 133 TGLCYDIRMRYHCEVKPTLDVHPEDPRRIYYIYKELCKAGLVDDPESSRPLVPQPLQRID 192
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAG 119
A+EA ++ + VH H + ++ S +F + IA +SIY N + +A L+ G
Sbjct: 193 AREATEEEISLVHDAEHYDFVQ---STKFMLEEELIALEHTRDSIYFNSLTFTSAVLSCG 249
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
IE V + ++ +A A++RPPGHHAE ++ MGFCL+NNV VAA E + K
Sbjct: 250 GAIETCMAVVDRQVKNAIAVIRPPGHHAERNKTMGFCLFNNVCVAAKVCQKEFGD-KCRK 308
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
ILI+DWDVHHGN QK F+ DP +L+ S+H + G+FYP + G + G G GLG NIN
Sbjct: 309 ILILDWDVHHGNGIQKAFYDDPNILYISIHVYRDGSFYPGGEGGNWDRCGAGSGLGKNIN 368
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+PW GD DY+ + +++P+A +F PD++IISAGFDAAAGD LGGC VTP Y+ M
Sbjct: 369 IPWPTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYAHM 428
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQA 359
+ LM+ A GK+ + LEGGYN SIS S LA L+ + P Y ++ + +
Sbjct: 429 TRMLMNLAGGKVAVCLEGGYNFRSISKSALAVTRTLMGEPP----DRLYASSASRQAVNT 484
Query: 360 VRKKL---SAFW 368
V++ SA+W
Sbjct: 485 VKRVAMIQSAYW 496
>gi|325096734|gb|EGC50044.1| histone deacetylase hda1 [Ajellomyces capsulatus H88]
Length = 781
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 214/372 (57%), Gaps = 26/372 (6%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-----------IPQRCVVLN 61
GL YD RM H P D HPE+P RI I+ +L AG +PQ ++
Sbjct: 133 TGLCYDIRMRYHCEVKPTLDVHPEDPRRIYYIYKELCKAGLVDDPESSRPLVPQPLQRID 192
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAG 119
A+EA ++ + VH H + ++ S +F + IA +SIY N + +A L+ G
Sbjct: 193 AREATEEEISLVHDAEHYDFVQ---STKFMLEEELIALEHTRDSIYFNSLTFTSAVLSCG 249
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
IE V + ++ +A A++RPPGHHAE ++ MGFCL+NNV VAA E + K
Sbjct: 250 GAIETCMAVVDRQVKNAIAVIRPPGHHAERNKTMGFCLFNNVCVAAKVCQKEFGD-KCRK 308
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
ILI+DWDVHHGN QK F+ DP +L+ S+H + G+FYP + G + G G GLG NIN
Sbjct: 309 ILILDWDVHHGNGIQKAFYDDPNILYISIHVYRDGSFYPGGEGGNWDRCGAGSGLGKNIN 368
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+PW GD DY+ + +++P+A +F PD++IISAGFDAAAGD LGGC VTP Y+ M
Sbjct: 369 IPWPTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYAHM 428
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQA 359
+ LM+ A GK+ + LEGGYN SIS S LA L+ + P Y ++ + +
Sbjct: 429 TRMLMNLAGGKVAVCLEGGYNFRSISKSALAVTRTLMGEPP----DRLYASSASRQAVNT 484
Query: 360 VRKKL---SAFW 368
V++ SA+W
Sbjct: 485 VKRVAMIQSAYW 496
>gi|384875344|gb|AFI26264.1| HDAC4 [Drosophila melanogaster]
Length = 1203
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 150/386 (38%), Positives = 226/386 (58%), Gaps = 33/386 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 770 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 829
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 830 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 886
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 887 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 946
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDW GN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 947 E--VRRILIVDWXXXXGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1002
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLGG
Sbjct: 1003 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGG 1062
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1063 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAEL 1122
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1123 ERPPCQNAINTLQKTIAIQXTHWPCV 1148
>gi|195168964|ref|XP_002025300.1| GL13309 [Drosophila persimilis]
gi|194108756|gb|EDW30799.1| GL13309 [Drosophila persimilis]
Length = 1286
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 212/340 (62%), Gaps = 30/340 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 868 KITTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 927
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L + ++ NE ++ A
Sbjct: 928 LQTVHTEAHAMLF---GSNQCQLTRPKLETTLAASFVRLSCGGLGVDLDTTWNEHHTATA 984
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L + P
Sbjct: 985 ARMAAGCVIDLAFKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKRLRQQMP 1044
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E+ +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 1045 EM--RRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1100
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LG+N+N+ W N GDA+Y+A + +++P+AK F PDI+++S+GFDAA G PLGG
Sbjct: 1101 LGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIAKGFNPDIVLVSSGFDAATGHPAPLGG 1160
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSV 328
V+P + M ++L+ A GK+VLALEGGY+L +I +S
Sbjct: 1161 YHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSA 1200
>gi|50308651|ref|XP_454328.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643463|emb|CAG99415.1| KLLA0E08383p [Kluyveromyces lactis]
Length = 704
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 144/374 (38%), Positives = 215/374 (57%), Gaps = 21/374 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQR----------- 56
+ G+ YD RM H Y HPE+P RI ++ L G+ Q
Sbjct: 53 KTGICYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRVYKILAENGLIQDPTLSGADSIGD 112
Query: 57 -CVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
V + +EA+++ +L VH+ H++ I + +S +S+Y N S +A
Sbjct: 113 LMVKVPVREAEEEEILQVHSRQHLDFISQTEQLERESLLKETEGG-DSVYFNNDSYLSAK 171
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G IE + V EG + ++ A+VRPPGHHAEP+ A GFCL++NVAVAA+ +L PE
Sbjct: 172 LSCGGAIEACKAVVEGRVKNSIAVVRPPGHHAEPEIAGGFCLFSNVAVAAANMLKSYPE- 230
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ KI+IVDWD+HHGN TQK F+ D RVL+ S+HR++ G +YP G Y GEG G G
Sbjct: 231 SVRKIMIVDWDIHHGNGTQKAFYDDDRVLYVSLHRYQLGKYYPGTIHGNYDQTGEGKGEG 290
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N N+ W G GDA+Y+ ++ +++P+ ++F PD+++IS+GFDAA GD +G C VTP
Sbjct: 291 FNCNITWPTGGVGDAEYMWAFEQVIMPMGREFEPDLVLISSGFDAADGDTIGQCHVTPAC 350
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP-VAGSSEAYPFESTW 354
Y M L+ A+G + + LEGGYNL SI+ S L VL+ + P + + P
Sbjct: 351 YGHMTHMLLSLAKGNLCVVLEGGYNLDSIAKSALGVCKVLVGEPPDELPAPKKQPTPEAK 410
Query: 355 RVIQAVRKKLSAFW 368
++I+ V + S +W
Sbjct: 411 KMIETVIRTQSKYW 424
>gi|367000379|ref|XP_003684925.1| hypothetical protein TPHA_0C03390 [Tetrapisispora phaffii CBS 4417]
gi|357523222|emb|CCE62491.1| hypothetical protein TPHA_0C03390 [Tetrapisispora phaffii CBS 4417]
Length = 701
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/377 (40%), Positives = 214/377 (56%), Gaps = 27/377 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ G+ YD RM H Y HPE+P RI I+ L G I
Sbjct: 52 KTGICYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPSLTGVSDIGD 111
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL---NSIYLNEGSSE 112
+ + +EA + +L VHTE H+ +++ R+ + SK +S+YLN S
Sbjct: 112 LMLKIPVREATKEEILDVHTEEHMQFLESTEKMT----REELLSKTEKGDSVYLNNDSYI 167
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG + +A AIVRPPGHHAEP A GFCL++NV+VAA +L
Sbjct: 168 SARLSCGGAIEACKAVVEGRVKNALAIVRPPGHHAEPQAAGGFCLFSNVSVAAKSILKTY 227
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + KILIVDWD+HHGN TQK F++D VL+ S+HR E G FYP +G Y +G+G
Sbjct: 228 PE-SVRKILIVDWDIHHGNGTQKAFYEDDNVLYISLHRFELGKFYPGFPEGNYDKVGDGK 286
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+N N+ W GD +Y+ ++ I++P+A++F PD++I+S+GFDAA GD +G C VT
Sbjct: 287 GKGFNCNITWPVKGVGDVEYIWAFEQIVIPMAREFRPDLVIVSSGFDAAHGDTIGQCHVT 346
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP-VAGSSEAYPFE 351
P Y M L A+G + + LEGGYNL SISNS LA +L+ + P S+ P
Sbjct: 347 PNCYGYMTHMLKSLARGNLCVVLEGGYNLDSISNSALAVAKILIGEPPDEIPESDRDPKP 406
Query: 352 STWRVIQAVRKKLSAFW 368
+I V + S +W
Sbjct: 407 GVLEMINKVIRVQSKYW 423
>gi|194764073|ref|XP_001964156.1| GF21406 [Drosophila ananassae]
gi|190619081|gb|EDV34605.1| GF21406 [Drosophila ananassae]
Length = 1282
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/387 (38%), Positives = 229/387 (59%), Gaps = 34/387 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGD---YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
K GL +D M KH+ G +HPE+ R++++W +L + +RC L A++A +
Sbjct: 848 KVTTGLAFDPLMLKHSCTCGGNNAHHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQE 907
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLN----------------EGSSE 112
L +VHTE H L S Q R ++ + L++ ++ + ++
Sbjct: 908 ELQTVHTEAHAMLF---GSNQCQLSRPKLDNALSASFVKLSCGGLGVDLDTTWNEQHTAA 964
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
AA +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L
Sbjct: 965 AARMAAGCVIDLAFKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRM 1024
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE+ +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G
Sbjct: 1025 PEM--RRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGA 1080
Query: 233 GLGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLG 287
GLG+N+N+ W N GDA+Y+A + +++P+A+ F PDI+++S+GFDAA G PLG
Sbjct: 1081 GLGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLG 1140
Query: 288 GCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS 345
G V+P + M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+A +
Sbjct: 1141 GYHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAE 1200
Query: 346 -EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1201 LERPPCQNAINTLQKTIAIQQTHWPCV 1227
>gi|355564164|gb|EHH20664.1| hypothetical protein EGK_03566, partial [Macaca mulatta]
Length = 446
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 225/379 (59%), Gaps = 32/379 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 67 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 126
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 127 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 186
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 187 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 246
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 247 QQSKA---SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 301
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 302 AGSGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPA 361
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG + P G+ M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 362 PLGGYHIQPLGFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 421
Query: 345 SEAY---PFESTWRVIQAV 360
E + P + R ++AV
Sbjct: 422 EEGWKQKPNLNAIRSLEAV 440
>gi|395330702|gb|EJF63085.1| histone deacetylase complex protein [Dichomitus squalens LYAD-421
SS1]
Length = 677
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/367 (42%), Positives = 213/367 (58%), Gaps = 13/367 (3%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
R +VG +Y +M H+ H E P RI I++ L+ G L + +
Sbjct: 46 RESAYQVGYVYSSKMMTHSCIRS--HCEQPERISRIFDILKQNGCLSEMKQLPIRRVLRE 103
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAER 127
+L VH+++ + + + S D A + S+Y++ + AA L+AG VIE +
Sbjct: 104 EVLLVHSQSLWDKVLALHSLTDQDIADSEAYYNDLSLYVHPTTPYAAQLSAGGVIEASLA 163
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
VA GE+ AFAIVRPPGHHAEPDE MGFC +NNV++AA + P I KILI+DWDV
Sbjct: 164 VARGEVKKAFAIVRPPGHHAEPDEHMGFCFFNNVSIAAKVVQLRTP---IKKILILDWDV 220
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ+ F DP VL+ S+HR+E G FYP G T GEG GLGY++N+PW
Sbjct: 221 HHGNGTQRAFNDDPSVLYISLHRYEGGNFYPNGPFGSMTSCGEGRGLGYSVNIPWPEPGM 280
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GDADY+ + I++P+A +F PD+++ISAGFDAA GD LG C V+P GY+ M L A
Sbjct: 281 GDADYILAFQKIVMPIALEFSPDLVMISAGFDAADGDDLGECHVSPAGYAHMTHMLCSLA 340
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPF---ESTWRVIQAVRKKL 364
GK+V+ALEGGY L +I+NS LA V+L P + P E+ I V +
Sbjct: 341 GGKVVVALEGGYCLDAIANSALAVTQVILGGMP----PQLEPMIASEAATETIYQVAMEQ 396
Query: 365 SAFWPTL 371
S +W L
Sbjct: 397 SKYWKNL 403
>gi|156615356|ref|XP_001647545.1| predicted protein [Nematostella vectensis]
gi|156214778|gb|EDO35756.1| predicted protein [Nematostella vectensis]
Length = 418
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 209/337 (62%), Gaps = 26/337 (7%)
Query: 23 MCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVN 80
M KH GD HPE+P R+++IW +LQ G+ C + ++A +LSVH+E H
Sbjct: 1 MLKHQCSCGDATSHPEHPGRLQSIWARLQETGVVNMCDRVRPRKATLAEILSVHSEQHTM 60
Query: 81 LIKNISSKQFDSRRDRIAS--------------KLNSIYLNEGSSEAAYLAAGSVIEVAE 126
L + + + I + ++I+ S+ AA +A G V+E+ +
Sbjct: 61 LFGGSTQCRTKAEDGTITTLKCFSSLPCGGMGVDGDTIWNEVHSANAARMAVGCVVELTQ 120
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
+VA E+ + AIVRPPGHHAE +AMGFC +NNVA+AA L R ++ I+++LIVDWD
Sbjct: 121 KVAAQEIKNGMAIVRPPGHHAEAHQAMGFCYFNNVAIAARLL---RLKMSIDRVLIVDWD 177
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
+HHGN TQ+MF+ DP VL+ S+HRH+ GTF+P G G G G+GYN+N+ W G
Sbjct: 178 IHHGNGTQQMFYDDPHVLYISLHRHDDGTFFPGT--GKAEECGAGIGVGYNVNIAWSGGL 235
Query: 247 ---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSVMLK 301
GDA+YLA + +++P+AK+F PDII++S GFDAAAG LGG +V+ ++ +
Sbjct: 236 DPPYGDAEYLAAFRSVVIPIAKEFQPDIILVSCGFDAAAGHSPQLGGYKVSAPCFAHLTN 295
Query: 302 KLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
+LMD A G++VLALEGGY+L S+ ++ AC+ LL D
Sbjct: 296 QLMDLADGRVVLALEGGYSLPSLCDAAEACLRALLSD 332
>gi|301604840|ref|XP_002932071.1| PREDICTED: histone deacetylase 4-like [Xenopus (Silurana) tropicalis]
Length = 1085
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/428 (37%), Positives = 246/428 (57%), Gaps = 44/428 (10%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ C + ++A + L +
Sbjct: 661 TGLVYDTLMLKHQCICGNTNSHPEHAGRIQSIWSRLQETGLRSMCECIRGRKATLEELQT 720
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSV 121
VH+E H L ++ ++ + + +L ++I+ SS AA LA G V
Sbjct: 721 VHSEAHTLLYGTNPLNRQKLEGSLASLFVRLSCGGVGVDSDTIWNEVHSSGAARLAVGCV 780
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+A +V GEL + FA+VRPPGHHAE MGFC +N+VA+AA L + L + K L
Sbjct: 781 VELASKVVSGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKVL---QQRLNVEKTL 837
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+
Sbjct: 838 IVDWDVHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMA 895
Query: 242 WENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGY 296
+ G GDA+YLA + +++P+A F PD++++SAGFDA G PLGG V+ +
Sbjct: 896 FTGGLEPPMGDAEYLAAFRTVVMPIAAKFSPDVVLVSAGFDAVEGHPAPLGGYNVSAKCF 955
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK--PVAGSS-EAYPFEST 353
+ K+LM+ A G++VLALEGG++L +I ++ AC++ LL +K P+ S + P +
Sbjct: 956 GYLTKQLMELAGGRVVLALEGGHDLTAICDASEACVSALLGNKLEPLPESVLQQRPNGNA 1015
Query: 354 WRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSED--EDTKVETLEAVLQV 411
R ++ V + S +WP L H+ SS+ + E K E EA
Sbjct: 1016 ARSMENVIQIQSEYWPCL----------------HITSSTVAYSLIEAQKCENEEAETVT 1059
Query: 412 ALSKLKVD 419
A++ L VD
Sbjct: 1060 AMASLSVD 1067
>gi|357625415|gb|EHJ75870.1| putative histone deacetylase 7A [Danaus plexippus]
Length = 906
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 219/375 (58%), Gaps = 23/375 (6%)
Query: 15 VGLLYDERMCKHNTPDGDY---HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
GL YD M KH G + HPE+ R++++W +L G+ R A++A + L
Sbjct: 454 TGLAYDALMLKHGCACGAHAPTHPEHGGRLQSVWARLCETGLAARTERTRARKATLEELQ 513
Query: 72 SVHTENHVNL-IKNISSKQFDSRRDRIAS--------KLNSIYLNEGSSEAAYLAAGSVI 122
SVH E HV D R R+ ++ + + + AA LAAG++I
Sbjct: 514 SVHGEAHVAAWAGRGRPGAGDGRAVRLVRLACGGLGVDADTAFSDAHTPPAARLAAGALI 573
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
++A R A EL + FAIVRPPGHHAEP++AMGFC +NNVA+AA L LG+ +ILI
Sbjct: 574 DLATRTATNELRNGFAIVRPPGHHAEPNQAMGFCFFNNVAIAARILHT---RLGLQRILI 630
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQ++F++DP VL+ S+HRH+ G F+P G + G GPGLGY +NV W
Sbjct: 631 VDWDVHHGNGTQQIFYEDPHVLYISLHRHDDGNFFPGT--GAASECGAGPGLGYTVNVAW 688
Query: 243 ENG-RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYSVM 299
DA+YLA + +++P+AK++ P+++++S GFDAAAG P+GG V+ ++ M
Sbjct: 689 PGSPPLADAEYLAAFRTVVMPIAKEYDPELVLVSCGFDAAAGHPAPMGGYNVSAACFAHM 748
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQA 359
++LM A GK+VL+LEGGY+L ++ + C+ LL ++ A S A
Sbjct: 749 TRELMSLAGGKVVLSLEGGYDLAAMCDCAQECVRALLGERLAAPSLSELARAPAPHAQAA 808
Query: 360 VRKKLSA---FWPTL 371
+R L+A WP L
Sbjct: 809 LRTALAAQSPHWPVL 823
>gi|367016591|ref|XP_003682794.1| hypothetical protein TDEL_0G02160 [Torulaspora delbrueckii]
gi|359750457|emb|CCE93583.1| hypothetical protein TDEL_0G02160 [Torulaspora delbrueckii]
Length = 714
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 206/345 (59%), Gaps = 20/345 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ L YD RM H Y HPE+P RI ++ L G I
Sbjct: 65 KTALCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRVYKILAENGLINDPTLSGIDEIGD 124
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ + +EA D+ +L VH++ ++ ++ SS+ + K +S+Y N S +A
Sbjct: 125 LMLKIPVREATDEEILEVHSKENLEFVER-SSRMKREELLKETEKGDSVYFNNDSYVSAK 183
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G VI+ + V EG + +A A+VRPPGHHAEP+ GFCL++NVAVAA +L + PE
Sbjct: 184 LSCGGVIDACKAVVEGRVKNALAVVRPPGHHAEPEAPGGFCLFSNVAVAAQNILKQYPE- 242
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +ILI+DWD+HHGN TQK F+ DPRVL+ S+HR E G +YP +G Y GEG G G
Sbjct: 243 SVRRILILDWDIHHGNGTQKAFYNDPRVLYISLHRFEMGKYYPGTINGRYDQTGEGKGEG 302
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N N+ W G GDA+Y+ ++ I++P+A++F PD++IIS+GFDAA GD +G C VTP
Sbjct: 303 FNCNITWPVGGVGDAEYMLAFEQIVMPMAREFQPDLVIISSGFDAADGDTIGQCHVTPSC 362
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + +ALEGGYNL +I+ S L+ VL+ + P
Sbjct: 363 YGQMTHMLKSLARGNLCVALEGGYNLDAIAISALSVAKVLIGEPP 407
>gi|183985772|gb|AAI66352.1| LOC100158627 protein [Xenopus (Silurana) tropicalis]
Length = 546
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/349 (43%), Positives = 218/349 (62%), Gaps = 29/349 (8%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH GD HPE+ RI++IW++LQ G+ C + ++A + L S
Sbjct: 110 TGIVYDSVMLKHQCTCGDNSNHPEHAGRIQSIWSRLQERGLRNNCECIRGRKATLEELQS 169
Query: 73 VHTENHVNLIKN--ISSKQFDSRR------DRIASKL---------NSIYLNEGSSEAAY 115
VHTE HV L ++ + D+R+ R+ L ++I+ SS AA
Sbjct: 170 VHTETHVLLYGTNPLNRLKLDNRKLAGILSQRMFVMLPCGGLGVDSDTIWNELHSSNAAR 229
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSVI++A +VA EL + FA+VRPPGHHA+P AMGFC +N+VA+AA L R
Sbjct: 230 WAAGSVIDLAFKVASRELKNGFALVRPPGHHADPSTAMGFCFFNSVAIAAKQLQLRR--- 286
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ KILIVDWDVHHGN TQ++F+ DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 287 DVRKILIVDWDVHHGNGTQRVFYTDPNVLYISLHRHDDGNFFPGS--GAADEVGAGNGEG 344
Query: 236 YNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YL + +++P+A +F PD++++SAGFDAA G PLGG +
Sbjct: 345 FNVNVAWTGGLDPPMGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAAEGHPAPLGGYK 404
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
VT + M ++LM A G++VLALEGG++L SI ++ AC++ LL ++
Sbjct: 405 VTAKCFGHMTRQLMSLAGGRVVLALEGGHDLTSICDASEACVSALLGNE 453
>gi|156361230|ref|XP_001625421.1| predicted protein [Nematostella vectensis]
gi|156212255|gb|EDO33321.1| predicted protein [Nematostella vectensis]
Length = 369
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 218/377 (57%), Gaps = 27/377 (7%)
Query: 15 VGLLYDERMCKH----------NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE 64
GL+YD+RM +H NT + E P+RI + K + G+ RC + ++
Sbjct: 1 TGLVYDDRMKRHVNIWDKYVYINTLICSLY-EVPDRIGRPYEKHKEYGLLDRCYKIPSRH 59
Query: 65 AKDKNLLSVHTENHVNLIKNISSKQFDSRRD--RIASKLNSIYLNEGSSEAAYLAAGSVI 122
A +++LL +H++ H++ +K S Q RD + + +SIY+++ + A L+ G +
Sbjct: 60 ATEEDLLCLHSKEHIDKMK---STQDMKPRDLFNLGEEYDSIYMSKDVYDCALLSCGCTL 116
Query: 123 EVAERVAEGE-------LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
E VA + +N F +RPPGHHA+ D AMG+C +NNVA+AA +
Sbjct: 117 AAVEHVATNKSSKHSIHINQLF-FLRPPGHHADADSAMGYCFFNNVAIAAKL---AQQRW 172
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
G+ +ILIVDWD+HHGN TQ +F DP VL+FS+HR++ FYP + Y ++G+G G G
Sbjct: 173 GMQRILIVDWDIHHGNGTQNLFESDPSVLYFSLHRYDHANFYPFSAQANYDIVGKGQGKG 232
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N+NVPW GDADY+A + ILLP+A +F PDI+++SAGFD+A GDP G C +TP G
Sbjct: 233 FNVNVPWNKSHIGDADYIAAFQQILLPIAYEFDPDIVLVSAGFDSARGDPKGYCDITPEG 292
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
Y + LM A GK+V+ LEGGYN+ S++ S+ +C + LL D P +S +
Sbjct: 293 YCHLTNMLMSLAGGKVVVILEGGYNITSVAESMCSCTSTLLGDPCPRLDGPMVPCQSVLK 352
Query: 356 VIQAVRKKLSAFWPTLA 372
I V FW L
Sbjct: 353 SISNVVNVHKQFWKNLT 369
>gi|189237454|ref|XP_967425.2| PREDICTED: similar to histone deacetylase [Tribolium castaneum]
Length = 807
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/404 (39%), Positives = 226/404 (55%), Gaps = 46/404 (11%)
Query: 7 EGRTIKRR-------VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRC 57
+G T+ RR GL YD +M KH G+ HPE+ R+++IW++L G+ RC
Sbjct: 358 DGPTLSRRRASSTPTTGLAYDSQMLKHACICGNNAIHPEHAGRLQSIWSRLLETGLVSRC 417
Query: 58 VVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIAS------------------ 99
L ++A L H+E H L S + +++S
Sbjct: 418 DRLRPRKASTTELQMCHSEAHALLYGTSSMNRHKMDMSKLSSLPVTAFVRLPCGGIGVDT 477
Query: 100 --KLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCL 157
N +Y ++ AA +A G +++A R G++ + FA+VRPPGHHAEP +AMGFC
Sbjct: 478 DTTWNEVY----TAPAARMAVGCTVDLAVRTWTGDIRNGFAVVRPPGHHAEPQQAMGFCF 533
Query: 158 YNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFY 217
+N+VA+AA L E ++KILI DW VHHGN TQ +F+ DPRVL S+HRH+ G F+
Sbjct: 534 FNSVAIAARVLQREH---RVHKILIFDWGVHHGNGTQDIFYDDPRVLVISMHRHDDGNFF 590
Query: 218 PANDDGFYTMIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIII 274
P G G G G+G+N+N+ W G DADYLA + I++P+A++F PDI+++
Sbjct: 591 PGT--GSPGECGAGAGVGFNVNIAWSGGLNPPLADADYLAAFRAIVMPIAREFNPDIVLV 648
Query: 275 SAGFDAAAGD--PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACM 332
SAGFDA G PLGG +V+ + M ++LM A+G++VLALEGGY+L SI +S C+
Sbjct: 649 SAGFDATDGHLPPLGGYKVSAACFGHMTRQLMQLARGRVVLALEGGYDLPSICDSAEECV 708
Query: 333 NVLLED--KPVAGSSEAY-PFESTWRVIQAVRKKLSAFWPTLAD 373
VLL D P+A S A P + +Q V SA WP L +
Sbjct: 709 RVLLGDSPSPIAPSELARAPCGNAVLALQKVISVQSAHWPCLQE 752
>gi|225579850|gb|ACN94123.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 543 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 602
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 603 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 661
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 662 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 718
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 719 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 778
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 779 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 838
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 839 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 898
Query: 366 AFWPTL 371
W +L
Sbjct: 899 NHWRSL 904
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 112 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 171
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 172 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 231
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + ++LI+D+DVHHG
Sbjct: 232 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRVLIIDYDVHHG 288
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 289 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 348
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 349 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 408
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 409 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 467
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 468 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 525
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 526 ----ARLQVLRAETKLSVPSFKV 544
>gi|402885752|ref|XP_003906310.1| PREDICTED: histone deacetylase 7 isoform 1 [Papio anubis]
gi|383419041|gb|AFH32734.1| histone deacetylase 7 isoform a [Macaca mulatta]
Length = 991
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 553 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 612
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 613 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 672
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 673 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 732
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 733 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 787
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 788 AGSGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPA 847
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 848 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 907
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 908 EEGWKQKPNLNAIRSLEAVIRVHSKYW 934
>gi|386764457|ref|NP_001245681.1| HDAC6, isoform F [Drosophila melanogaster]
gi|383293407|gb|AFH07395.1| HDAC6, isoform F [Drosophila melanogaster]
Length = 1022
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 540 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 599
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 600 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 658
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 659 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 715
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 716 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 775
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 776 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 835
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 836 CLEGGYNVNSISYAMTMCTKTLLGD 860
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 109 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 168
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 169 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 228
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 229 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 285
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 286 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 345
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 346 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 405
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 406 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 464
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 465 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 522
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 523 ----ARLQVLRAETKLSVPSFKV 541
>gi|395541062|ref|XP_003772467.1| PREDICTED: histone deacetylase 7 isoform 3 [Sarcophilus harrisii]
Length = 950
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 229/388 (59%), Gaps = 32/388 (8%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 510 ARTLPYTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKA 569
Query: 66 KDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNE 108
+ L SVH E HV L + ++A L ++I+
Sbjct: 570 SLEELQSVHDERHVLLYGTNPLSRLKLDNGKLAGILAQRMFVMLPCGGVGVDTDTIWNEL 629
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL 168
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A+ L
Sbjct: 630 HSSNAARWAAGSVTDLAFKVAARELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIASRQL 689
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
+ ++KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +
Sbjct: 690 QQQG---KVSKILIVDWDVHHGNGTQQTFYEDPSVLYISLHRHDDGNFFPGS--GAVDEV 744
Query: 229 GEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG-- 283
G G G G+NINV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 745 GAGNGEGFNINVAWAGGLDPPMGDPEYLAAFRTVVMPIAQEFSPDLVMVSAGFDAADGHP 804
Query: 284 DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG 343
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K
Sbjct: 805 PPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVTALLGNKVDPL 864
Query: 344 SSEAY---PFESTWRVIQAVRKKLSAFW 368
S E++ P + R ++AV + S +W
Sbjct: 865 SEESWKQKPNLNAIRSLEAVIRVHSKYW 892
>gi|384875350|gb|AFI26269.1| HDAC6 [Drosophila melanogaster]
Length = 1138
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 543 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 602
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 603 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 661
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 662 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 718
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 719 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 778
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 779 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 838
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 839 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 898
Query: 366 AFWPTL 371
W +L
Sbjct: 899 NHWRSL 904
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 112 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 171
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 172 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 231
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 232 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 288
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 289 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 348
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 349 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 408
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 409 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 467
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 468 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 525
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 526 ----ARLQVLRAETKLSVPSFKV 544
>gi|24642142|ref|NP_573017.2| HDAC6, isoform A [Drosophila melanogaster]
gi|22833159|gb|AAF48443.2| HDAC6, isoform A [Drosophila melanogaster]
gi|28557633|gb|AAO45222.1| LD43531p [Drosophila melanogaster]
gi|220947430|gb|ACL86258.1| HDAC6-PA [synthetic construct]
gi|225579765|gb|ACN94047.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579774|gb|ACN94055.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579792|gb|ACN94071.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579801|gb|ACN94079.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579837|gb|ACN94111.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579855|gb|ACN94127.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579864|gb|ACN94135.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579873|gb|ACN94143.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579882|gb|ACN94151.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579891|gb|ACN94159.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579900|gb|ACN94167.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579918|gb|ACN94183.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579927|gb|ACN94191.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579947|gb|ACN94209.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579963|gb|ACN94223.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 533 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 592
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 593 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 651
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 652 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 708
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 709 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 768
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 769 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 828
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 829 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 888
Query: 366 AFWPTL 371
W +L
Sbjct: 889 NHWRSL 894
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 102 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 161
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 162 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 221
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 222 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 278
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 279 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 338
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 339 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 398
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 399 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 457
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 458 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 515
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 516 ----ARLQVLRAETKLSVPSFKV 534
>gi|24642146|ref|NP_727843.1| HDAC6, isoform C [Drosophila melanogaster]
gi|22833161|gb|AAN09662.1| HDAC6, isoform C [Drosophila melanogaster]
gi|225579769|gb|ACN94051.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579778|gb|ACN94059.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579796|gb|ACN94075.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579805|gb|ACN94083.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579841|gb|ACN94115.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579859|gb|ACN94131.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579868|gb|ACN94139.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579877|gb|ACN94147.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579886|gb|ACN94155.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579895|gb|ACN94163.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579904|gb|ACN94171.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579922|gb|ACN94187.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579931|gb|ACN94195.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579949|gb|ACN94211.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579967|gb|ACN94227.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 543 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 602
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 603 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 661
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 662 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 718
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 719 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 778
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 779 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 838
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 839 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 898
Query: 366 AFWPTL 371
W +L
Sbjct: 899 NHWRSL 904
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 112 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 171
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 172 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 231
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 232 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 288
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 289 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 348
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 349 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 408
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 409 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 467
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 468 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 525
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 526 ----ARLQVLRAETKLSVPSFKV 544
>gi|24642144|ref|NP_727842.1| HDAC6, isoform B [Drosophila melanogaster]
gi|22833160|gb|AAN09661.1| HDAC6, isoform B [Drosophila melanogaster]
gi|225579768|gb|ACN94050.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579777|gb|ACN94058.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579795|gb|ACN94074.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579804|gb|ACN94082.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579840|gb|ACN94114.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579858|gb|ACN94130.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579867|gb|ACN94138.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579876|gb|ACN94146.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579885|gb|ACN94154.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579894|gb|ACN94162.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579903|gb|ACN94170.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579921|gb|ACN94186.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579930|gb|ACN94194.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579948|gb|ACN94210.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579966|gb|ACN94226.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 540 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 599
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 600 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 658
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 659 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 715
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 716 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 775
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 776 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 835
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 836 CLEGGYNVNSISYAMTMCTKTLLGD 860
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 109 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 168
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 169 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 228
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 229 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 285
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 286 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 345
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 346 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 405
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 406 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 464
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 465 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 522
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 523 ----ARLQVLRAETKLSVPSFKV 541
>gi|225579940|gb|ACN94203.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 543 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 602
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 603 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 661
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 662 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 718
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 719 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 778
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 779 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 838
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 839 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 898
Query: 366 AFWPTL 371
W +L
Sbjct: 899 NHWRSL 904
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 112 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 171
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 172 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 231
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 232 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 288
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR + G+F+P + Y IG G G GYN NVP +
Sbjct: 289 QGTQRFFYNDPRVVYFSIHRFQHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 348
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 349 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 408
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 409 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 467
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 468 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 525
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 526 ----ARLQVLRAETKLSVPSFKV 544
>gi|225579849|gb|ACN94122.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 540 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 599
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 600 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 658
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 659 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 715
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 716 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 775
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 776 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 835
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 836 CLEGGYNVNSISYAMTMCTKTLLGD 860
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 109 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 168
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 169 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 228
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + ++LI+D+DVHHG
Sbjct: 229 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRVLIIDYDVHHG 285
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 286 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 345
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 346 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 405
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 406 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 464
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 465 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 522
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 523 ----ARLQVLRAETKLSVPSFKV 541
>gi|225579846|gb|ACN94119.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 533 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 592
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 593 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 651
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 652 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 708
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 709 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 768
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 769 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 828
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 829 CLEGGYNVNSISYAMTMCTKTLLGD 853
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 102 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 161
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 162 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 221
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + ++LI+D+DVHHG
Sbjct: 222 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRVLIIDYDVHHG 278
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 279 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 338
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 339 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 398
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 399 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 457
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 458 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 515
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 516 ----ARLQVLRAETKLSVPSFKV 534
>gi|225579936|gb|ACN94199.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 533 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 592
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 593 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 651
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 652 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 708
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 709 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 768
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 769 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 828
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 829 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 888
Query: 366 AFWPTL 371
W +L
Sbjct: 889 NHWRSL 894
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 102 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 161
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 162 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 221
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 222 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 278
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR + G+F+P + Y IG G G GYN NVP +
Sbjct: 279 QGTQRFFYNDPRVVYFSIHRFQHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 338
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 339 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 398
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 399 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 457
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 458 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 515
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 516 ----ARLQVLRAETKLSVPSFKV 534
>gi|225579832|gb|ACN94107.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 543 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 602
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 603 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 661
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 662 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 718
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 719 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 778
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 779 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 838
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 839 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 898
Query: 366 AFWPTL 371
W +L
Sbjct: 899 NHWRSL 904
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 227/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 112 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 171
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 172 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 231
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 232 GRAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 288
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 289 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 348
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 349 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 408
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 409 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 467
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 468 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 525
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 526 ----ARLQVLRAETKLSVPSFKV 544
>gi|384875349|gb|AFI26268.1| HDAC6 [Drosophila melanogaster]
Length = 1128
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 533 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 592
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 593 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 651
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 652 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 708
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 709 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 768
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 769 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 828
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 829 CLEGGYNVNSISYAMTMCTKTLLGD 853
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 102 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 161
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 162 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 221
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 222 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 278
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 279 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 338
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 339 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 398
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 399 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 457
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 458 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 515
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 516 ----ARLQVLRAETKLSVPSFKV 534
>gi|225579813|gb|ACN94090.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579822|gb|ACN94098.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 540 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 599
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 600 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 658
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 659 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 715
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 716 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 775
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 776 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 835
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 836 CLEGGYNVNSISYAMTMCTKTLLGD 860
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 227/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 109 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 168
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 169 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 228
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 229 GRAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 285
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 286 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 345
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 346 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 405
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 406 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 464
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 465 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 522
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 523 ----ARLQVLRAETKLSVPSFKV 541
>gi|225579758|gb|ACN94041.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579909|gb|ACN94175.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579954|gb|ACN94215.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 533 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 592
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 593 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 651
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 652 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 708
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 709 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 768
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 769 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 828
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 829 CLEGGYNVNSISYAMTMCTKTLLGD 853
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 102 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 161
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 162 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 221
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 222 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 278
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 279 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 338
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 339 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 398
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 399 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 457
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 458 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 515
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 516 ----ARLQVLRAETKLSVPSFKV 534
>gi|255982634|gb|ACU45748.1| AT13940p [Drosophila melanogaster]
Length = 1022
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 540 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 599
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 600 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 658
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 659 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 715
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 716 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 775
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 776 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 835
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 836 CLEGGYNVNSISYAMTMCTKTLLGD 860
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 229/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 109 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 168
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 169 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 228
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 229 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 285
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 286 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 345
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P GG VTP Y +L L+ A +
Sbjct: 346 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGGMEVTPACYPHLLNPLLRLADAR 405
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 406 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 464
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 465 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 522
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 523 ----ARLQVLRAETKLSVPSFKV 541
>gi|225579814|gb|ACN94091.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579823|gb|ACN94099.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 543 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 602
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 603 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 661
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 662 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 718
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 719 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 778
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 779 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 838
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 839 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 898
Query: 366 AFWPTL 371
W +L
Sbjct: 899 NHWRSL 904
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 227/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 112 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 171
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 172 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 231
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 232 GRAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 288
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 289 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 348
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 349 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 408
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 409 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 467
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 468 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 525
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 526 ----ARLQVLRAETKLSVPSFKV 544
>gi|384875348|gb|AFI26267.1| HDAC6 [Drosophila melanogaster]
Length = 1135
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 540 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 599
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 600 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 658
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 659 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 715
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 716 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 775
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 776 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 835
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 836 CLEGGYNVNSISYAMTMCTKTLLGD 860
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 109 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 168
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 169 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 228
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 229 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 285
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 286 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 345
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 346 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 405
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 406 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 464
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 465 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 522
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 523 ----ARLQVLRAETKLSVPSFKV 541
>gi|225579760|gb|ACN94043.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579913|gb|ACN94179.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579958|gb|ACN94219.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 543 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 602
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 603 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 661
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 662 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 718
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 719 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 778
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 779 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 838
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 839 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 898
Query: 366 AFWPTL 371
W +L
Sbjct: 899 NHWRSL 904
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 112 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 171
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 172 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 231
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 232 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 288
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 289 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 348
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 349 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 408
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 409 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 467
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 468 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 525
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 526 ----ARLQVLRAETKLSVPSFKV 544
>gi|115470717|ref|NP_001058957.1| Os07g0164100 [Oryza sativa Japonica Group]
gi|113610493|dbj|BAF20871.1| Os07g0164100 [Oryza sativa Japonica Group]
gi|125557339|gb|EAZ02875.1| hypothetical protein OsI_25007 [Oryza sativa Indica Group]
gi|125599217|gb|EAZ38793.1| hypothetical protein OsJ_23197 [Oryza sativa Japonica Group]
Length = 623
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/367 (44%), Positives = 216/367 (58%), Gaps = 22/367 (5%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + + HPE P+R++AI L AAGI P +CV++ +E + LL VHT
Sbjct: 208 FDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPSKCVMVPPREITKEELLRVHT 267
Query: 76 ENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+H++ + KN+ F S Y N S+ AA LAAG ++A + G
Sbjct: 268 SDHIDSVEQTKNMLYSYFTS----------DTYANGHSACAAKLAAGICADLANLIVSGR 317
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + FA+VRPPGHHA +AMGFCL+NN AVAA + K+LIVDWDVHHGN
Sbjct: 318 VRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAK----KVLIVDWDVHHGNG 373
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F D VL+ S+HRHE G+FYP G +G G G+++N+PW G GD DY
Sbjct: 374 TQEIFDGDNSVLYISLHRHEDGSFYPGT--GAANEVGVMDGQGFSVNIPWSRGGVGDNDY 431
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ + H++LP+A +F PDI IISAGFDAA GDPLG C VTP GYS M L +QGK++
Sbjct: 432 IFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACSQGKLL 491
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
+ LEGGYNL SIS+S + VLL D PV + P E + + V FWP L
Sbjct: 492 VILEGGYNLRSISSSATEVVKVLLGDSPVYDTDATEPSEEGIQTVLQVLSIQQQFWPVLV 551
Query: 373 DELPTKL 379
+ L
Sbjct: 552 PSFASVL 558
>gi|225579810|gb|ACN94087.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579819|gb|ACN94095.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 533 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 592
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 593 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 651
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 652 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 708
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 709 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 768
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 769 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 828
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 829 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 888
Query: 366 AFWPTL 371
W +L
Sbjct: 889 NHWRSL 894
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 227/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 102 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 161
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 162 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 221
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 222 GRAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 278
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 279 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 338
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 339 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 398
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 399 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 457
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 458 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 515
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 516 ----ARLQVLRAETKLSVPSFKV 534
>gi|225579939|gb|ACN94202.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 540 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 599
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 600 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 658
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 659 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 715
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 716 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 775
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 776 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 835
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 836 CLEGGYNVNSISYAMTMCTKTLLGD 860
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 109 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 168
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 169 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 228
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 229 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 285
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR + G+F+P + Y IG G G GYN NVP +
Sbjct: 286 QGTQRFFYNDPRVVYFSIHRFQHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 345
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 346 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 405
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 406 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 464
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 465 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 522
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 523 ----ARLQVLRAETKLSVPSFKV 541
>gi|380797645|gb|AFE70698.1| histone deacetylase 7 isoform a, partial [Macaca mulatta]
Length = 637
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 199 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 258
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 259 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDAIWNELH 318
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 319 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 378
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 379 QQSK---ASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 433
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 434 AGSGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPA 493
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 494 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 553
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 554 EEGWKQKPNLNAIRSLEAVIRVHSKYW 580
>gi|225579828|gb|ACN94103.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 533 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 592
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 593 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 651
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 652 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 708
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 709 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 768
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 769 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 828
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 829 CLEGGYNVNSISYAMTMCTKTLLGD 853
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 227/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 102 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 161
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 162 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 221
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 222 GRAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 278
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 279 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 338
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 339 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 398
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 399 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 457
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 458 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 515
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 516 ----ARLQVLRAETKLSVPSFKV 534
>gi|270007657|gb|EFA04105.1| hypothetical protein TcasGA2_TC014342 [Tribolium castaneum]
Length = 863
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/404 (39%), Positives = 226/404 (55%), Gaps = 46/404 (11%)
Query: 7 EGRTIKRR-------VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRC 57
+G T+ RR GL YD +M KH G+ HPE+ R+++IW++L G+ RC
Sbjct: 414 DGPTLSRRRASSTPTTGLAYDSQMLKHACICGNNAIHPEHAGRLQSIWSRLLETGLVSRC 473
Query: 58 VVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIAS------------------ 99
L ++A L H+E H L S + +++S
Sbjct: 474 DRLRPRKASTTELQMCHSEAHALLYGTSSMNRHKMDMSKLSSLPVTAFVRLPCGGIGVDT 533
Query: 100 --KLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCL 157
N +Y ++ AA +A G +++A R G++ + FA+VRPPGHHAEP +AMGFC
Sbjct: 534 DTTWNEVY----TAPAARMAVGCTVDLAVRTWTGDIRNGFAVVRPPGHHAEPQQAMGFCF 589
Query: 158 YNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFY 217
+N+VA+AA L E ++KILI DW VHHGN TQ +F+ DPRVL S+HRH+ G F+
Sbjct: 590 FNSVAIAARVLQREH---RVHKILIFDWGVHHGNGTQDIFYDDPRVLVISMHRHDDGNFF 646
Query: 218 PANDDGFYTMIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIII 274
P G G G G+G+N+N+ W G DADYLA + I++P+A++F PDI+++
Sbjct: 647 PGT--GSPGECGAGAGVGFNVNIAWSGGLNPPLADADYLAAFRAIVMPIAREFNPDIVLV 704
Query: 275 SAGFDAAAGD--PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACM 332
SAGFDA G PLGG +V+ + M ++LM A+G++VLALEGGY+L SI +S C+
Sbjct: 705 SAGFDATDGHLPPLGGYKVSAACFGHMTRQLMQLARGRVVLALEGGYDLPSICDSAEECV 764
Query: 333 NVLLED--KPVAGSSEAY-PFESTWRVIQAVRKKLSAFWPTLAD 373
VLL D P+A S A P + +Q V SA WP L +
Sbjct: 765 RVLLGDSPSPIAPSELARAPCGNAVLALQKVISVQSAHWPCLQE 808
>gi|225579759|gb|ACN94042.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579912|gb|ACN94178.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579957|gb|ACN94218.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 540 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 599
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 600 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 658
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 659 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 715
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 716 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 775
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 776 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 835
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 836 CLEGGYNVNSISYAMTMCTKTLLGD 860
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 109 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 168
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 169 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 228
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 229 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 285
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 286 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 345
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 346 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 405
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 406 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 464
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 465 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 522
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 523 ----ARLQVLRAETKLSVPSFKV 541
>gi|402885756|ref|XP_003906312.1| PREDICTED: histone deacetylase 7 isoform 3 [Papio anubis]
Length = 974
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 536 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 595
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 596 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 655
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 656 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 715
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 716 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 770
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 771 AGSGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPA 830
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 831 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 890
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 891 EEGWKQKPNLNAIRSLEAVIRVHSKYW 917
>gi|225579831|gb|ACN94106.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 540 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 599
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 600 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 658
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 659 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 715
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 716 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 775
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 776 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 835
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 836 CLEGGYNVNSISYAMTMCTKTLLGD 860
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 227/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 109 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 168
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 169 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 228
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 229 GRAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 285
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 286 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 345
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 346 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 405
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 406 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 464
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 465 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 522
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 523 ----ARLQVLRAETKLSVPSFKV 541
>gi|281360899|ref|NP_001162760.1| HDAC6, isoform D [Drosophila melanogaster]
gi|4455131|gb|AAD21090.1| histone deacetylase HDA2 [Drosophila melanogaster]
gi|272506112|gb|ACZ95295.1| HDAC6, isoform D [Drosophila melanogaster]
gi|384875351|gb|AFI26270.1| HDAC6 [Drosophila melanogaster]
Length = 883
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 458 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 517
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 518 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 576
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 577 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 633
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 634 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 693
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 694 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 753
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 754 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 813
Query: 366 AFWPTL 371
W +L
Sbjct: 814 NHWRSL 819
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 27 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 86
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 87 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 146
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 147 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 203
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 204 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 263
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 264 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 323
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 324 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 382
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 383 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 440
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 441 ----ARLQVLRAETKLSVPSFKV 459
>gi|386764455|ref|NP_001245680.1| HDAC6, isoform E [Drosophila melanogaster]
gi|383293406|gb|AFH07394.1| HDAC6, isoform E [Drosophila melanogaster]
Length = 1108
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 513 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 572
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 573 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 631
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 632 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 688
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 689 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 748
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 749 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 808
Query: 314 ALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRKKLS 365
LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 809 CLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQR 868
Query: 366 AFWPTL 371
W +L
Sbjct: 869 NHWRSL 874
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 82 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 141
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 142 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 201
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 202 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 258
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 259 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 318
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 319 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 378
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 379 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 437
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 438 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 495
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 496 ----ARLQVLRAETKLSVPSFKV 514
>gi|442616414|ref|NP_001259569.1| HDAC6, isoform G [Drosophila melanogaster]
gi|440216793|gb|AGB95411.1| HDAC6, isoform G [Drosophila melanogaster]
Length = 1179
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V YD +M H + HPE P+RI+ I G+ ++ L+ + A +
Sbjct: 533 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLA 592
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + ++ D A NS+YL+ + + A LAAG V++ + V GE
Sbjct: 593 HTRAHVNTVRRLLGREPKELHD-AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGES 651
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHGN T
Sbjct: 652 RSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHGNGT 708
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD +Y
Sbjct: 709 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYA 768
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++P+A +F P ++++SAGFDAA GDPLGGC+VT GY ++ L A G+I++
Sbjct: 769 LAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIV 828
Query: 314 ALEGGYNLGSISNSVLACMNVLLED 338
LEGGYN+ SIS ++ C LL D
Sbjct: 829 CLEGGYNVNSISYAMTMCTKTLLGD 853
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 102 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 161
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 162 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVA 221
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 222 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 278
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G G GYN NVP +
Sbjct: 279 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNG 338
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 339 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 398
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST----------------W 354
+ + LEGGY L S++ + LL D P E P W
Sbjct: 399 VAVVLEGGYCLDSLAEGAALTLRSLLGD-PCPPLVETVPLPRAELAQALLSCIAVHRPHW 457
Query: 355 RVIQAVRK----------------KLSAFW---PTLADELPTKLTSLKAPPAHMISSSDS 395
R +Q + + W P D PT+ T++ PP + S++
Sbjct: 458 RCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDTAIPLPPEKLTSNA-- 515
Query: 396 EDEDTKVETLEAVLQVALSKLKV 418
+++ L A ++++ KV
Sbjct: 516 ----ARLQVLRAETKLSVPSFKV 534
>gi|403217120|emb|CCK71615.1| hypothetical protein KNAG_0H02010 [Kazachstania naganishii CBS
8797]
Length = 693
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 204/350 (58%), Gaps = 20/350 (5%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG---------- 52
R + GL YD RM H Y HPE+P RI I+ L G
Sbjct: 37 RYTPLKTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLITDPMLSGI 96
Query: 53 --IPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGS 110
I + + +EA + +L VH++ H+ I++++ D + +S+Y N S
Sbjct: 97 DDIGDLMLKIPVREATSQEVLEVHSKEHLEFIESVTKMSHDELLKSTETG-DSVYFNNDS 155
Query: 111 SEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLN 170
S +A L+ G IE + V EG + +AFA+VRPPGHH+EP+ A GFCL++NVAVA+ +L
Sbjct: 156 SSSAKLSCGGAIEACKAVVEGRVKNAFAVVRPPGHHSEPESAGGFCLFSNVAVASKNILR 215
Query: 171 ERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGE 230
PE + +I+I+DWD+HHGN TQK F+ D RVL+ S+HR E G +YP G Y GE
Sbjct: 216 NYPE-SVRRIMILDWDIHHGNGTQKAFYDDDRVLYISLHRFELGKYYPGTAQGHYDKTGE 274
Query: 231 GPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCR 290
G G G+N N+ W G GDA+Y+ ++ +++P++++F PD++IISAGFDAA GD +G C
Sbjct: 275 GKGEGFNCNITWPVGGVGDAEYMWAFEQVVMPMSREFRPDLVIISAGFDAADGDTIGQCH 334
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
V+P Y M L A G + + LEGGYNL +I+ S L+ VL+ + P
Sbjct: 335 VSPSCYGHMTHMLKSLANGNLCVVLEGGYNLDAIARSALSVAKVLIGEPP 384
>gi|395541060|ref|XP_003772466.1| PREDICTED: histone deacetylase 7 isoform 2 [Sarcophilus harrisii]
Length = 921
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 229/388 (59%), Gaps = 32/388 (8%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 481 ARTLPYTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKA 540
Query: 66 KDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNE 108
+ L SVH E HV L + ++A L ++I+
Sbjct: 541 SLEELQSVHDERHVLLYGTNPLSRLKLDNGKLAGILAQRMFVMLPCGGVGVDTDTIWNEL 600
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL 168
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A+ L
Sbjct: 601 HSSNAARWAAGSVTDLAFKVAARELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIASRQL 660
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
+ ++KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +
Sbjct: 661 QQQG---KVSKILIVDWDVHHGNGTQQTFYEDPSVLYISLHRHDDGNFFPGS--GAVDEV 715
Query: 229 GEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG-- 283
G G G G+NINV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 716 GAGNGEGFNINVAWAGGLDPPMGDPEYLAAFRTVVMPIAQEFSPDLVMVSAGFDAADGHP 775
Query: 284 DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG 343
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K
Sbjct: 776 PPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVTALLGNKVDPL 835
Query: 344 SSEAY---PFESTWRVIQAVRKKLSAFW 368
S E++ P + R ++AV + S +W
Sbjct: 836 SEESWKQKPNLNAIRSLEAVIRVHSKYW 863
>gi|402885754|ref|XP_003906311.1| PREDICTED: histone deacetylase 7 isoform 2 [Papio anubis]
gi|383419043|gb|AFH32735.1| histone deacetylase 7 isoform d [Macaca mulatta]
Length = 954
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 516 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 575
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 576 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 635
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 636 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 695
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 696 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 750
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 751 AGSGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPA 810
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 811 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 870
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 871 EEGWKQKPNLNAIRSLEAVIRVHSKYW 897
>gi|449488629|ref|XP_004186156.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 7 [Taeniopygia
guttata]
Length = 682
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 221/360 (61%), Gaps = 30/360 (8%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
HPE+ RI++IW++LQ G+ RC L ++A + L SVH+E HV L +
Sbjct: 271 HPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQSVHSERHVLLYGTNPLNRLKLD 330
Query: 94 RDRIASKL-----------------NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
++A L ++I+ SS AA AAGSV E+A +VA EL +
Sbjct: 331 NGKLAGILSQRTFVMLPCGGLGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNG 390
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
FA+VRPPGHHA+P AMGFC +N+VA+AA L + ++KILIVDWDVHHGN TQ++
Sbjct: 391 FAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKG---KLSKILIVDWDVHHGNGTQQI 447
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG---RCGDADYL 253
F++DP VL+ S+HRH+ G F+P + G +G GPG G+N+NV W G GD +YL
Sbjct: 448 FYRDPEVLYISLHRHDDGNFFPGS--GAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYL 505
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYSVMLKKLMDFAQGKI 311
A + +++P+A +F PD++++SAGFDAA G PLGG +V+ + M K+LM A G +
Sbjct: 506 AAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAV 565
Query: 312 VLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFESTWRVIQAVRKKLSAFW 368
VLALEGG++L +I ++ AC++VLL E +P+ S P + R ++AV + S +W
Sbjct: 566 VLALEGGHDLTAICDASEACVSVLLGHEPEPLPEDSLRQKPNANAVRSLEAVIQVQSKYW 625
>gi|395541064|ref|XP_003772468.1| PREDICTED: histone deacetylase 7 isoform 4 [Sarcophilus harrisii]
Length = 889
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 229/388 (59%), Gaps = 32/388 (8%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 449 ARTLPYTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKA 508
Query: 66 KDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNE 108
+ L SVH E HV L + ++A L ++I+
Sbjct: 509 SLEELQSVHDERHVLLYGTNPLSRLKLDNGKLAGILAQRMFVMLPCGGVGVDTDTIWNEL 568
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL 168
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A+ L
Sbjct: 569 HSSNAARWAAGSVTDLAFKVAARELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIASRQL 628
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
+ ++KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +
Sbjct: 629 QQQG---KVSKILIVDWDVHHGNGTQQTFYEDPSVLYISLHRHDDGNFFPGS--GAVDEV 683
Query: 229 GEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG-- 283
G G G G+NINV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 684 GAGNGEGFNINVAWAGGLDPPMGDPEYLAAFRTVVMPIAQEFSPDLVMVSAGFDAADGHP 743
Query: 284 DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG 343
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K
Sbjct: 744 PPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVTALLGNKVDPL 803
Query: 344 SSEAY---PFESTWRVIQAVRKKLSAFW 368
S E++ P + R ++AV + S +W
Sbjct: 804 SEESWKQKPNLNAIRSLEAVIRVHSKYW 831
>gi|452985836|gb|EME85592.1| hypothetical protein MYCFIDRAFT_107291, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 664
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/396 (38%), Positives = 225/396 (56%), Gaps = 27/396 (6%)
Query: 14 RVGLLYDERMCKH---NTPDGDYHPENPNRIKAIWNKLQAAGIPQR-----------CVV 59
+ GL+YD RM H + D HPE+P RI AI+ AG+ R
Sbjct: 17 QTGLVYDVRMRFHVEAEPSEDDLHPEDPRRIHAIFEAFVNAGLAWREGDSGPTSDYYMGR 76
Query: 60 LNAKEAKDKNLLSVHTENHVNLIKNI---SSKQFDSRRDRIASKLNSIYLNEGSSEAAYL 116
++A+ + + VHT NH N ++++ S++Q + S+ +SIYL+ + A L
Sbjct: 77 VDARMVTREEVCLVHTANHWNWVQSLGVMSAEQLKTEEQHEGSRNDSIYLSNSTPYCASL 136
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
+AG IE V G++ + FA++RPPGHHAE ++A GFC Y+NV++A E E
Sbjct: 137 SAGGAIEACRAVMLGKVKNIFAVIRPPGHHAEREDAKGFCFYDNVSIATKVCQKEFGER- 195
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD-------GFYTMIG 229
K+ I+DWDVHHGN Q+ + DP VL+ S+H H+ GTFYP + G + G
Sbjct: 196 CRKVFILDWDVHHGNGIQQANYDDPNVLYISLHVHKRGTFYPEHSYRDNRIAYGDHLHCG 255
Query: 230 EGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGC 289
EGPGLG N+N+PW GDADY+ + +++P+A +F PD++II+AGFDAA GD LGGC
Sbjct: 256 EGPGLGKNVNIPWSRQGMGDADYIYAFQQVVMPIATEFNPDLVIIAAGFDAAEGDMLGGC 315
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP 349
+VTP GY+ M LM A GK+ + LEGGYNL SI+ S A ++ + P + + P
Sbjct: 316 KVTPAGYAHMTHMLMSLADGKLAVCLEGGYNLESIARSATAVGRTMMGEPPDRLDNLS-P 374
Query: 350 FESTWRVIQAVRKKLSAFWPTL-ADELPTKLTSLKA 384
S ++ V ++ S FW L +L +L+ L+
Sbjct: 375 TNSGVDDVKLVLRQQSRFWSCLYPKDLSARLSQLRG 410
>gi|395541066|ref|XP_003772469.1| PREDICTED: histone deacetylase 7 isoform 5 [Sarcophilus harrisii]
Length = 852
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 229/388 (59%), Gaps = 32/388 (8%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 412 ARTLPYTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKA 471
Query: 66 KDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNE 108
+ L SVH E HV L + ++A L ++I+
Sbjct: 472 SLEELQSVHDERHVLLYGTNPLSRLKLDNGKLAGILAQRMFVMLPCGGVGVDTDTIWNEL 531
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL 168
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A+ L
Sbjct: 532 HSSNAARWAAGSVTDLAFKVAARELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIASRQL 591
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
+ ++KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +
Sbjct: 592 QQQG---KVSKILIVDWDVHHGNGTQQTFYEDPSVLYISLHRHDDGNFFPGS--GAVDEV 646
Query: 229 GEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG-- 283
G G G G+NINV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 647 GAGNGEGFNINVAWAGGLDPPMGDPEYLAAFRTVVMPIAQEFSPDLVMVSAGFDAADGHP 706
Query: 284 DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG 343
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K
Sbjct: 707 PPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVTALLGNKVDPL 766
Query: 344 SSEAY---PFESTWRVIQAVRKKLSAFW 368
S E++ P + R ++AV + S +W
Sbjct: 767 SEESWKQKPNLNAIRSLEAVIRVHSKYW 794
>gi|395541058|ref|XP_003772465.1| PREDICTED: histone deacetylase 7 isoform 1 [Sarcophilus harrisii]
Length = 913
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 229/387 (59%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 474 RTLPYTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 533
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH E HV L + ++A L ++I+
Sbjct: 534 LEELQSVHDERHVLLYGTNPLSRLKLDNGKLAGILAQRMFVMLPCGGVGVDTDTIWNELH 593
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A+ L
Sbjct: 594 SSNAARWAAGSVTDLAFKVAARELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIASRQLQ 653
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ ++KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 654 QQG---KVSKILIVDWDVHHGNGTQQTFYEDPSVLYISLHRHDDGNFFPGS--GAVDEVG 708
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
G G G+NINV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 709 AGNGEGFNINVAWAGGLDPPMGDPEYLAAFRTVVMPIAQEFSPDLVMVSAGFDAADGHPP 768
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 769 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVTALLGNKVDPLS 828
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E++ P + R ++AV + S +W
Sbjct: 829 EESWKQKPNLNAIRSLEAVIRVHSKYW 855
>gi|344266741|ref|XP_003405438.1| PREDICTED: histone deacetylase 7-like [Loxodonta africana]
Length = 1090
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 227/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 652 RTLPFTTGLFYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 711
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 712 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 771
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 772 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADRSTAMGFCFFNSVAIACRQLQ 831
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ NKILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 832 QQG---KANKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAADEVG 886
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 887 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPP 946
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 947 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 1006
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 1007 EEGWKQKPNLNAIRSLEAVIRVHSKYW 1033
>gi|410920445|ref|XP_003973694.1| PREDICTED: histone deacetylase 7-like [Takifugu rubripes]
Length = 893
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 238/390 (61%), Gaps = 32/390 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD +M KH GD HPE+ R+++IW++L G+ +C + +++A + L S
Sbjct: 454 TGLVYDSQMQKHQCTCGDNSRHPEHAGRVQSIWSRLHERGLRGQCERIRSRKATLEELQS 513
Query: 73 VHTENHVNLIKN--ISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV + ++ + D+R+ + +++++ +S A+
Sbjct: 514 VHSEKHVLVFGTNPLNRLKLDNRKLAGILSQRTFVMLPCGGVGVDIDTVWNEHHTSTASR 573
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+AAG V ++A +VA+GEL + FA+VRPPGHHA +GFC +N+VA+AA L L
Sbjct: 574 IAAGCVTDLALKVAQGELKNGFAVVRPPGHHATHSSPLGFCFFNSVAIAAKQLQQR---L 630
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
++KILIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P G + +G+G G G
Sbjct: 631 NVSKILIVDWDIHHGNGTQEAFYSDPSVLYISLHRYDGGNFFPGG--GHPSEVGKGAGEG 688
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
+N+N+ W G GDA+YLA + ++P+A F PD++++SAGFDA AG LGG +
Sbjct: 689 FNVNIGWTGGLNPPIGDAEYLAAFRTAVMPIAHQFSPDVVLVSAGFDAVAGHSSSLGGYK 748
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EA 347
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL E +P++ S+ E
Sbjct: 749 VTAKCFGFLTRQLMSLAGGRVVLALEGGHDLKAICDASEACVSALLGMEVEPLSSSTLEQ 808
Query: 348 YPFESTWRVIQAVRKKLSAFWPTLADELPT 377
P E+ + +Q+V + +W ++ D T
Sbjct: 809 KPCENAVKSLQSVIQVHGEYWQSVEDSADT 838
>gi|383423195|gb|AFH34811.1| histone deacetylase 4 [Macaca mulatta]
Length = 1079
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 161/420 (38%), Positives = 246/420 (58%), Gaps = 33/420 (7%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 654 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 713
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSV 121
VH+E H L ++ ++ DS + +L ++I+ S+ AA LA G V
Sbjct: 714 VHSEAHTLLYGTNPLNRQKLDSSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCV 773
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R L ++KIL
Sbjct: 774 VELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR--LSVSKIL 830
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+
Sbjct: 831 IVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMA 888
Query: 242 WENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGY 296
+ G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG ++ +
Sbjct: 889 FTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCF 948
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFEST 353
+ K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ + P +
Sbjct: 949 GYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANA 1008
Query: 354 WRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
R ++ V + S +W L T SL I + E+E+ + T A L V +
Sbjct: 1009 VRSMEKVMEIHSKYWRCLQRATSTAGRSL-------IEAQTCENEEAETVTAMASLSVGV 1061
>gi|195566858|ref|XP_002106992.1| HDAC6 [Drosophila simulans]
gi|194204389|gb|EDX17965.1| HDAC6 [Drosophila simulans]
Length = 777
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 215/369 (58%), Gaps = 12/369 (3%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+K G+ DERM + ++ + P+RI+ I G+ + L+A+ A +
Sbjct: 176 LKETSGIRDDERMEELSSRYDSIYIHPPSRIQHIHKMHDDYGLLTQMKQLSARAATTDEV 235
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
HT HVN ++ + ++ D A NS+YL+ + + A LAAGSV++ + V
Sbjct: 236 CLAHTRAHVNTVRRLLGREPKELHD-AAGVYNSVYLHPRTFDCAVLAAGSVLQAVDSVLR 294
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
GE S VRPPGHHAE D GFC++NNVA+AA + + + G+ ++LIVDWDVHHG
Sbjct: 295 GESRSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD---FGLERVLIVDWDVHHG 351
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ +F +P+VL+ S+HR+E G+F+P DG + ++G+G G G+N+N+PW GD
Sbjct: 352 NGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDL 411
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
+Y + +++P+A +F P ++++SAGFDAA GDPLGGC+VTP GY ++ L A G+
Sbjct: 412 EYALAFQQLVMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGMLTHWLSALASGR 471
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLED---KPVAGSSE-----AYPFESTWRVIQAVRK 362
I++ LEGGYN+ SIS ++ C LL D P G++ F+S +Q +
Sbjct: 472 IIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQLCLQ 531
Query: 363 KLSAFWPTL 371
W +L
Sbjct: 532 VQRTHWRSL 540
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 105 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 164
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGS 110
L +HTE H +K S + D R + ++S+ +SIY++ S
Sbjct: 165 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPPS 204
>gi|334349157|ref|XP_001372584.2| PREDICTED: histone deacetylase 9-like [Monodelphis domestica]
Length = 1219
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 220/357 (61%), Gaps = 31/357 (8%)
Query: 9 RTIKR--RVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE 64
RT++R GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++
Sbjct: 647 RTLQRVSETGLVYDALMLKHQCICGRSALHPEHAGRIQSIWSRLQETGLLSKCERIQGRK 706
Query: 65 AKDKNLLSVHTENHVNLIKN--ISSKQFDSR--RDRIASKLNSIYLNEG----------- 109
A + L VH+++H L +S ++ D R R + K+ S+ G
Sbjct: 707 ASLEELRLVHSDHHSLLYGTDPLSRQKLDPRMLRGDTSQKVFSLLPCGGLGVDSDTIWNE 766
Query: 110 --SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASF 167
SS AA +A G VIE+A +V GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +
Sbjct: 767 LHSSAAARMAVGCVIELASKVVSGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKY 826
Query: 168 LLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTM 227
L + + + KIL+VD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G
Sbjct: 827 L---QEQFNVAKILVVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNE 881
Query: 228 IGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284
+G GPG GYN+N+ W G GDA+YLA + +++P+A++F PDI+++SAGFDA G
Sbjct: 882 VGSGPGEGYNVNIAWTGGLDPPMGDAEYLAAFRTVVMPIAREFDPDIVLVSAGFDAVEGH 941
Query: 285 --PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
PLGG +VT + + +LM A G +V+ALEGG++L +I ++ AC+N LLE++
Sbjct: 942 TPPLGGYKVTAKCFGNLTSQLMQVANGHVVMALEGGHDLTAICDASEACVNALLENE 998
>gi|395841588|ref|XP_003793616.1| PREDICTED: histone deacetylase 7 isoform 3 [Otolemur garnettii]
Length = 953
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 251/444 (56%), Gaps = 41/444 (9%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT++ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 515 RTLRFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQEQGLRSQCECLRGRKAS 574
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L +F +++A L ++I+
Sbjct: 575 LEELQSVHSERHVLLYGTNPLSRFKLDNEKLAGILAERMFVMLPCGGVGVDTDTIWNELH 634
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA +L + FA+VRPPGHHA+ AMGFC +N+VAVA L
Sbjct: 635 SSNAACWAAGSVTDLAFKVASRKLKNGFAVVRPPGHHADHSTAMGFCFFNSVAVACRQLQ 694
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++D VL+ S+HRH+ G F+P + G +G
Sbjct: 695 QQS---KASKILIVDWDVHHGNGTQQTFYQDSSVLYISLHRHDDGNFFPGS--GAVDEVG 749
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 750 AGNGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPA 809
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL K S
Sbjct: 810 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGKKVDPLS 869
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E + P + R ++AV + S +W + +L S P +D+E+
Sbjct: 870 EEGWKQKPNLNAIRSLEAVIRAHSKYWGCM-----QRLASCPDPWVPRRPGADTEE---- 920
Query: 402 VETLEAVLQVALSKLKVDDGHAEL 425
VE + A+ +++ L D +L
Sbjct: 921 VEAVTALASLSVGILAEDRSSEQL 944
>gi|431912251|gb|ELK14388.1| Histone deacetylase 4 [Pteropus alecto]
Length = 456
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/378 (40%), Positives = 234/378 (61%), Gaps = 26/378 (6%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 43 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELRT 102
Query: 73 VHTENHVNLIKN--ISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSV 121
VH+E H L ++ ++ DS + +L ++I+ SS AA LA G V
Sbjct: 103 VHSEAHALLYGTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCV 162
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+ RVA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++K+L
Sbjct: 163 VELVFRVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LSVSKML 219
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+
Sbjct: 220 IVDWDVHHGNGTQQAFYSDPSVLYISLHRYDDGNFFPGS--GAPDEVGAGPGVGFNVNMA 277
Query: 242 WENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGY 296
+ G GD +YLA + +++P+A +FGPD++++S+GFDA G PLGG ++ +
Sbjct: 278 FTGGLDPPMGDVEYLAAFRMVVMPIANEFGPDVVLVSSGFDAVEGHPTPLGGYNLSAKCF 337
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFEST 353
+ K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ + P +
Sbjct: 338 GYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANA 397
Query: 354 WRVIQAVRKKLSAFWPTL 371
R ++ V + S +WP+L
Sbjct: 398 VRSMEKVIEIHSRYWPSL 415
>gi|33115101|gb|AAP95013.1|AF306859_1 putative histone deacetylase [Emericella nidulans]
Length = 782
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/369 (40%), Positives = 214/369 (57%), Gaps = 16/369 (4%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----PQRCVV------LNA 62
GL YD +M H P D HPE+P RI I+ +L AG+ R +V ++A
Sbjct: 126 GLCYDVQMRYHCEVRPTSDVHPEDPRRIYYIYKELCRAGLVDDIESTRPLVARPLKRIHA 185
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A ++ + VHT H +++ + D + +SIY N + ++ L+ G I
Sbjct: 186 RNATEEEISLVHTAAHYAFVES-TKDMSDEELIALEHTRDSIYFNNLTFASSLLSVGGAI 244
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV+VAA + +R L KI+I
Sbjct: 245 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAAR-VCQQRLGLSCRKIMI 303
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
+DWDVHHGN QK F+ DP VL+ S+H ++ G+FYP DG G G G G N+N+PW
Sbjct: 304 LDWDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPW 363
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GD DY+ + +++P+A++F PD++II++GFDAAAGD LGGC VTP Y+ M
Sbjct: 364 PSQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGFDAAAGDTLGGCFVTPACYAHMTHM 423
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
LM AQGK+ + LEGGYN SIS S LA L+ + P S P E+ I+ V
Sbjct: 424 LMTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMGNPPDRLSFTC-PSEAAISTIRRVSS 482
Query: 363 KLSAFWPTL 371
S +W +
Sbjct: 483 IQSDYWKCM 491
>gi|432107235|gb|ELK32649.1| Histone deacetylase 4 [Myotis davidii]
Length = 1039
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/420 (38%), Positives = 249/420 (59%), Gaps = 33/420 (7%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 614 TGLVYDTLMLKHQCTCGNSNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 673
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSV 121
VH+E H L ++ ++ DS + +L ++I+ SS AA LA G V
Sbjct: 674 VHSEAHTLLYGTNPLNRQKLDSSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCV 733
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R L ++K L
Sbjct: 734 VELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAR-LLQQR--LNVSKTL 790
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+
Sbjct: 791 IVDWDVHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMA 848
Query: 242 WENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGY 296
+ G GDA+YLA + +++P+A +F PD++++SAGFDA G PLGG ++ +
Sbjct: 849 FTGGLDPPMGDAEYLAAFRMVVMPIANEFAPDVVLVSAGFDAVEGHPTPLGGYNLSAKCF 908
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFEST 353
+ K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ + P +
Sbjct: 909 GYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANA 968
Query: 354 WRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
R ++ V + S +W +L LP+ + ++ + E+E+ + T A L V +
Sbjct: 969 VRSMEKVIEIHSQYWRSL-QRLPSTVA------YSLVEAQKRENEEAETVTAMASLSVGV 1021
>gi|410906265|ref|XP_003966612.1| PREDICTED: histone deacetylase 4-like [Takifugu rubripes]
Length = 1059
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 155/374 (41%), Positives = 229/374 (61%), Gaps = 25/374 (6%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 634 TGLVYDSLMQKHQCMCGNTNNHPEHAGRIQSIWSRLQETGLRAQCECIRGRKATLEELQT 693
Query: 73 VHTENHVNLI-KNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSVI 122
VH+E HV L N ++ D + +L ++I+ SS AA LA GSV+
Sbjct: 694 VHSEAHVLLYGTNPLRQKLDCSITPMFVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVV 753
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E+ +VA EL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L INKILI
Sbjct: 754 ELVFKVATQELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LNINKILI 810
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+NV +
Sbjct: 811 VDWDVHHGNGTQQAFYDDPSVLYLSIHRYDDGNFFPGS--GAPDEVGSGPGVGFNVNVAF 868
Query: 243 ENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYS 297
G DA+YLA + +++P+A +F PDI+++S+GFDA G PLGG +T +
Sbjct: 869 TGGLEPPMSDAEYLAAFRSVVMPIANEFAPDIVLVSSGFDAVEGHPPPLGGYTLTAKCFG 928
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFESTW 354
+ ++LM A G++VLALEGG++L +I ++ AC+ LL E P+ S E P +
Sbjct: 929 YLTRQLMTLAGGRLVLALEGGHDLTAICDASEACLAALLGQELDPLPKSVLEQRPNVNAV 988
Query: 355 RVIQAVRKKLSAFW 368
R ++ V + S +W
Sbjct: 989 RSLEKVLEIHSKYW 1002
>gi|259480794|tpe|CBF73762.1| TPA: Putative histone deacetylase
[Source:UniProtKB/TrEMBL;Acc:Q7Z8L7] [Aspergillus
nidulans FGSC A4]
Length = 766
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/369 (40%), Positives = 214/369 (57%), Gaps = 16/369 (4%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----PQRCVV------LNA 62
GL YD +M H P D HPE+P RI I+ +L AG+ R +V ++A
Sbjct: 126 GLCYDVQMRYHCEVRPTSDVHPEDPRRIYYIYKELCRAGLVDDIESTRPLVARPLKRIHA 185
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A ++ + VHT H +++ + D + +SIY N + ++ L+ G I
Sbjct: 186 RNATEEEISLVHTAAHYAFVES-TKDMSDEELIALEHTRDSIYFNNLTFASSLLSVGGAI 244
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV+VAA + +R L KI+I
Sbjct: 245 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAAR-VCQQRLGLSCRKIMI 303
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
+DWDVHHGN QK F+ DP VL+ S+H ++ G+FYP DG G G G G N+N+PW
Sbjct: 304 LDWDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPW 363
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GD DY+ + +++P+A++F PD++II++GFDAAAGD LGGC VTP Y+ M
Sbjct: 364 PSQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGFDAAAGDTLGGCFVTPACYAHMTHM 423
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
LM AQGK+ + LEGGYN SIS S LA L+ + P S P E+ I+ V
Sbjct: 424 LMTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMGNPPDRLSFTC-PSEAAISTIRRVSS 482
Query: 363 KLSAFWPTL 371
S +W +
Sbjct: 483 IQSDYWKCM 491
>gi|114438941|gb|ABI74745.1| putative histone deacetylase [Monascus purpureus]
Length = 764
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 210/375 (56%), Gaps = 16/375 (4%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI--------PQRCVVL---N 61
GL YD RM H P D HPE+P RI I+ +L AG+ P C L +
Sbjct: 121 TGLCYDIRMRYHCEVRPTADVHPEDPRRIYYIYKELCRAGLVDDPESSRPLACRPLKRID 180
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSV 121
+ A + + VHT H +++ D D + +SIY N+ + +A L+ G
Sbjct: 181 VRNATVEEICLVHTPEHYIFVESTKDMSDDQLID-LEHTRDSIYFNKLTFASALLSTGGA 239
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
IE VA ++ +A A+VRPPGHHAE D+ MGFCL+NNV+VAA + E KI+
Sbjct: 240 IETCLAVATRKVKNAIAVVRPPGHHAEHDKTMGFCLFNNVSVAARVCQKQLGE-KCRKIM 298
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
I+DWDVHHGN QK F+ DP VL+ S H + G +YP D+G + G GPGLG N+N+P
Sbjct: 299 ILDWDVHHGNGIQKAFYSDPNVLYISFHVYAGGKYYPGGDEGNWDHCGAGPGLGRNVNIP 358
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLK 301
W GD DY+ + I++P+A +F PD++I+++GFDAAAGD LGGC VTP Y+ M
Sbjct: 359 WPQQGMGDGDYMFAFQQIVMPIANEFDPDLVIVASGFDAAAGDELGGCFVTPACYAQMTH 418
Query: 302 KLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVR 361
LM A GK+ + LEGGYN SIS S LA L+ + P S + P + ++ V
Sbjct: 419 MLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGEPPDRLLSTS-PSTFATQTVRQVM 477
Query: 362 KKLSAFWPTLADELP 376
S +W + + P
Sbjct: 478 MIQSQYWRCMYPKTP 492
>gi|62702143|gb|AAX93070.1| unknown [Homo sapiens]
Length = 1052
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 622 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 681
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 682 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 739
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 740 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 796
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 797 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 854
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 855 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 914
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 915 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 974
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 975 QRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSL-------IEAQTCENEEAETVTAM 1027
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1028 ASLSVGV 1034
>gi|449546463|gb|EMD37432.1| hypothetical protein CERSUDRAFT_83190 [Ceriporiopsis subvermispora
B]
Length = 618
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 149/321 (46%), Positives = 201/321 (62%), Gaps = 10/321 (3%)
Query: 23 MCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE---NHV 79
M H +G HPE P RI I++KL+ G + L + A +L VH+E V
Sbjct: 1 MTAHACVNG--HPEQPARIARIFDKLKDHGCIGQMRRLPIRPALRDEVLLVHSEALWEKV 58
Query: 80 NLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAI 139
I ++S + + + S+L S+Y++ + A L+ G VIE A VA G++ +FAI
Sbjct: 59 LAIHSMSEQDI-ADSESYYSEL-SLYVHPSTPYCAQLSCGGVIEAALAVARGDVQKSFAI 116
Query: 140 VRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWK 199
VRPPGHHAEPDE MGFC +NNV++A + P I K++I+DWDVHHGN TQK F+
Sbjct: 117 VRPPGHHAEPDEHMGFCFFNNVSIATKVVQLRTP---IKKVMILDWDVHHGNGTQKAFYD 173
Query: 200 DPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHI 259
DP VL+ S+HR++ G FYP G GEG GLGY++NVPW GDADYL + +
Sbjct: 174 DPSVLYVSLHRYDGGNFYPNGPFGSLISCGEGAGLGYSVNVPWPEKGMGDADYLLAFQKV 233
Query: 260 LLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGY 319
++P+A +F P+++IISAGFDAA GD LG C VTP GY+ M L A GK+V+ALEGGY
Sbjct: 234 IMPIAIEFAPELVIISAGFDAADGDDLGECHVTPDGYAHMTHMLSSLANGKLVVALEGGY 293
Query: 320 NLGSISNSVLACMNVLLEDKP 340
+L +ISNS LA V+L + P
Sbjct: 294 SLDAISNSALAVAKVILGEVP 314
>gi|441620551|ref|XP_003252284.2| PREDICTED: histone deacetylase 7 isoform 1 [Nomascus leucogenys]
Length = 990
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 156/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 552 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 611
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 612 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 671
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 672 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 731
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 732 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 786
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 787 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 846
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 847 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 906
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 907 EEGWKQKPNLNAIRSLEAVIRVHSKYW 933
>gi|395841586|ref|XP_003793615.1| PREDICTED: histone deacetylase 7 isoform 2 [Otolemur garnettii]
Length = 973
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 251/444 (56%), Gaps = 41/444 (9%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT++ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 535 RTLRFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQEQGLRSQCECLRGRKAS 594
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L +F +++A L ++I+
Sbjct: 595 LEELQSVHSERHVLLYGTNPLSRFKLDNEKLAGILAERMFVMLPCGGVGVDTDTIWNELH 654
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA +L + FA+VRPPGHHA+ AMGFC +N+VAVA L
Sbjct: 655 SSNAACWAAGSVTDLAFKVASRKLKNGFAVVRPPGHHADHSTAMGFCFFNSVAVACRQLQ 714
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++D VL+ S+HRH+ G F+P + G +G
Sbjct: 715 QQS---KASKILIVDWDVHHGNGTQQTFYQDSSVLYISLHRHDDGNFFPGS--GAVDEVG 769
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 770 AGNGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPA 829
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL K S
Sbjct: 830 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGKKVDPLS 889
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E + P + R ++AV + S +W + +L S P +D+E+
Sbjct: 890 EEGWKQKPNLNAIRSLEAVIRAHSKYWGCM-----QRLASCPDPWVPRRPGADTEE---- 940
Query: 402 VETLEAVLQVALSKLKVDDGHAEL 425
VE + A+ +++ L D +L
Sbjct: 941 VEAVTALASLSVGILAEDRSSEQL 964
>gi|260804019|ref|XP_002596886.1| hypothetical protein BRAFLDRAFT_103129 [Branchiostoma floridae]
gi|229282147|gb|EEN52898.1| hypothetical protein BRAFLDRAFT_103129 [Branchiostoma floridae]
Length = 926
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/348 (41%), Positives = 216/348 (62%), Gaps = 28/348 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH+ G+ YHPE+ RI+++W++LQ G+ RC + +++A L +
Sbjct: 486 TGVVYDPLMLKHSCSCGNNSYHPEHSGRIQSVWSRLQETGLVNRCERVRSRKATIDELKT 545
Query: 73 VHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYLNEG--------------SSEAAYL 116
H+E HV L + ++ DS++ + + YL G S A +
Sbjct: 546 CHSEQHVYLYGTNPLHRQKQDSKKLAGGLQKSFKYLPCGGLGVDADTIWNELHSPSALRM 605
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
AAG VIE+A +VA+GEL + FA+VRPPGHHAE D+AMGFC +N++AV A L+ L
Sbjct: 606 AAGCVIELAFKVAQGELKNGFAVVRPPGHHAEVDQAMGFCFFNSIAVTARLLVQ---RLK 662
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
+NK+LIVDWDVHHGN TQ+MF++D +VL+ S+HR + G F+P G G G GLG
Sbjct: 663 LNKVLIVDWDVHHGNGTQQMFYEDGQVLYVSLHRWDSGNFFPGT--GAPDECGNGAGLGK 720
Query: 237 NINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRV 291
N+N+ + G GDA+Y+A + +++P+A +F PD++++SAGFD A G LGG +V
Sbjct: 721 NVNISFSGGLEPPMGDAEYMAAFRTVVMPIAVEFSPDLVLVSAGFDTAEGHAPQLGGYKV 780
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
TP + M K+LM A G++VLALEGGY+L +I + C+ LL D+
Sbjct: 781 TPKCFGHMTKQLMSVAGGRVVLALEGGYDLAAICDCSEMCVQALLGDE 828
>gi|119499155|ref|XP_001266335.1| histone deacetylase hda1 [Neosartorya fischeri NRRL 181]
gi|119414499|gb|EAW24438.1| histone deacetylase hda1 [Neosartorya fischeri NRRL 181]
Length = 798
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 204/338 (60%), Gaps = 15/338 (4%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----PQRCVV------LNA 62
GL YD +M H P D HPE+P RI I+ +L AG+ R +V ++A
Sbjct: 133 GLCYDVQMRYHCEVRPTADVHPEDPRRIYYIYKELCRAGLVDDPESSRPLVARPLKRIHA 192
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A + + +HT +H +++ + D + +SIY N+ + ++ L+AG I
Sbjct: 193 RNATEAEISLIHTPDHFAFVES-TKDMSDDELIALEHTRDSIYFNKLTFASSLLSAGGAI 251
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV++AA N E KILI
Sbjct: 252 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSIAARVCQNTLGE-SCRKILI 310
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN QK F+ DP +L+ S+H ++ G FYP D+G + G G G+G N+N+PW
Sbjct: 311 VDWDVHHGNGIQKAFYDDPNILYISLHVYQDGKFYPGGDEGDWDHCGAGAGIGKNVNIPW 370
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GD DY+ + I++P+A++F PD++I+++GFDAAAGD LGGC VTP Y+ M
Sbjct: 371 PSQGMGDGDYMYAFQQIVMPIAQEFNPDLVIVASGFDAAAGDELGGCFVTPSCYAHMTHM 430
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
LM A GK+ + LEGGYN SIS S LA L+ D P
Sbjct: 431 LMTLAHGKVAVCLEGGYNFRSISKSALAVTKTLMGDPP 468
>gi|25058273|gb|AAH39904.1| HDAC4 protein [Homo sapiens]
gi|119591571|gb|EAW71165.1| histone deacetylase 4, isoform CRA_a [Homo sapiens]
Length = 972
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 542 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 601
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 602 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 659
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 660 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 716
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 717 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 774
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 775 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 834
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 835 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 894
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 895 QRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSL-------IEAQTCENEEAETVTAM 947
Query: 407 AVLQVAL 413
A L V +
Sbjct: 948 ASLSVGV 954
>gi|395841584|ref|XP_003793614.1| PREDICTED: histone deacetylase 7 isoform 1 [Otolemur garnettii]
Length = 990
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 251/444 (56%), Gaps = 41/444 (9%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT++ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 552 RTLRFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQEQGLRSQCECLRGRKAS 611
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L +F +++A L ++I+
Sbjct: 612 LEELQSVHSERHVLLYGTNPLSRFKLDNEKLAGILAERMFVMLPCGGVGVDTDTIWNELH 671
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA +L + FA+VRPPGHHA+ AMGFC +N+VAVA L
Sbjct: 672 SSNAACWAAGSVTDLAFKVASRKLKNGFAVVRPPGHHADHSTAMGFCFFNSVAVACRQLQ 731
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++D VL+ S+HRH+ G F+P + G +G
Sbjct: 732 QQS---KASKILIVDWDVHHGNGTQQTFYQDSSVLYISLHRHDDGNFFPGS--GAVDEVG 786
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 787 AGNGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPA 846
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL K S
Sbjct: 847 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGKKVDPLS 906
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E + P + R ++AV + S +W + +L S P +D+E+
Sbjct: 907 EEGWKQKPNLNAIRSLEAVIRAHSKYWGCM-----QRLASCPDPWVPRRPGADTEE---- 957
Query: 402 VETLEAVLQVALSKLKVDDGHAEL 425
VE + A+ +++ L D +L
Sbjct: 958 VEAVTALASLSVGILAEDRSSEQL 981
>gi|241838130|ref|XP_002415202.1| histone deacetylase 4, 5, putative [Ixodes scapularis]
gi|215509414|gb|EEC18867.1| histone deacetylase 4, 5, putative [Ixodes scapularis]
Length = 900
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 158/426 (37%), Positives = 244/426 (57%), Gaps = 41/426 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL YD M KH GDY HPE+ R+++IW +LQ G+ RC + +++A + + S
Sbjct: 486 TGLAYDSLMLKHQCICGDYSSHPEHGGRLQSIWARLQETGLAARCERIRSRKATLEEIQS 545
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL--------------NE-GSSEAAYLA 117
H E + + + ++ + S + NE ++ AA +A
Sbjct: 546 CHDEGYAFMFGTNPLNRQKLEMSKLELPIKSFVMLPCGGIGVDSDTTWNELHTASAARMA 605
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
G VIE++ +VA GE + FA+VRPPGHHAE +AMGFC +N+VA+AA L R +L +
Sbjct: 606 TGCVIELSFKVATGEAKNGFAMVRPPGHHAEFKQAMGFCFFNSVAIAAKQL---RQKLKM 662
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
KIL++DWDVHHGN Q++F+ DP VL+ S+HRH+ G F+P D +G G G+N
Sbjct: 663 EKILVIDWDVHHGNGLQQIFYDDPHVLYVSLHRHDDGNFFPGTGDP--QEVGVEDGTGFN 720
Query: 238 INVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVT 292
+N+ W N GDA+Y+A + I++P+A+DF P+I++++AGFDAAAG PLGG +++
Sbjct: 721 VNIAWSGTLNPPMGDAEYIAAFRTIVMPIARDFDPEIVLVAAGFDAAAGHPPPLGGYQIS 780
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY---P 349
P ++ M K+LM A+GK+VLALEGGY+L SI + C+ LL D+ E P
Sbjct: 781 PACFAYMTKQLMTLAKGKVVLALEGGYDLPSICDCSQECVAALLGDEVSPLREEEVTRQP 840
Query: 350 FESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDT-KVETLEAV 408
+ +V+Q + WP + PT +SL D++ +D +VET+ A+
Sbjct: 841 CGAAVQVLQRTAAIQAPHWPCIKKWAPTIGSSLL----------DAQQKDKEEVETVTAL 890
Query: 409 LQVALS 414
++++
Sbjct: 891 ASLSMA 896
>gi|4754907|gb|AAD29046.1|AF132607_1 histone deacetylase 4 [Homo sapiens]
Length = 1084
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 654 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 713
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 714 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 771
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 772 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 828
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 829 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 886
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 887 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 946
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 947 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1006
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 1007 QRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSL-------IEAQTCENEEAETVTAM 1059
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1060 ASLSVGV 1066
>gi|444514993|gb|ELV10710.1| Histone deacetylase 7 [Tupaia chinensis]
Length = 986
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 227/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 548 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 607
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH E HV L + ++A L ++I+
Sbjct: 608 LEELQSVHAERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 667
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 668 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 727
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 728 QQG---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 782
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 783 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRLVVMPIAREFSPDLVLVSAGFDAAEGHPA 842
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 843 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 902
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P S R ++AV + S +W
Sbjct: 903 EEGWKQKPNLSAIRSLEAVIQVHSKYW 929
>gi|431901405|gb|ELK08431.1| Histone deacetylase 7, partial [Pteropus alecto]
Length = 988
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 164/435 (37%), Positives = 250/435 (57%), Gaps = 41/435 (9%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 550 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 609
Query: 67 DKNLLSVHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEG 109
+ L SVH+E HV L +S+ + D+ + + ++I+
Sbjct: 610 LEELQSVHSERHVLLYGTNPLSNLKLDNGKLAGLMAQRMFVLLSCGEVGVDTDTIWNEMH 669
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSVI++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 670 SSNAARWAAGSVIDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 729
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ ++ILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 730 QQG---KASRILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 784
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 785 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 844
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 845 PLGGYHVSARCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 904
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E + P + R + +V + S +W + +L S P + +D+E+
Sbjct: 905 EEGWKQKPNLNAIRSLDSVIRVHSKYWACM-----QRLASCPEPWVPRVPGADAEE---- 955
Query: 402 VETLEAVLQVALSKL 416
VE + A+ +++ L
Sbjct: 956 VEAVTALASLSVGIL 970
>gi|153085395|ref|NP_006028.2| histone deacetylase 4 [Homo sapiens]
gi|259016348|sp|P56524.3|HDAC4_HUMAN RecName: Full=Histone deacetylase 4; Short=HD4
gi|119591572|gb|EAW71166.1| histone deacetylase 4, isoform CRA_b [Homo sapiens]
gi|168272944|dbj|BAG10311.1| histone deacetylase 4 [synthetic construct]
Length = 1084
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 654 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 713
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 714 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 771
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 772 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 828
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 829 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 886
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 887 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 946
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 947 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1006
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 1007 QRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSL-------IEAQTCENEEAETVTAM 1059
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1060 ASLSVGV 1066
>gi|6635127|dbj|BAA22957.2| KIAA0288 protein [Homo sapiens]
Length = 1097
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 667 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 726
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 727 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 784
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 785 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 841
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 842 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 899
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 900 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 959
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 960 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1019
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 1020 QRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSL-------IEAQTCENEEAETVTAM 1072
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1073 ASLSVGV 1079
>gi|426339081|ref|XP_004033491.1| PREDICTED: histone deacetylase 4 [Gorilla gorilla gorilla]
Length = 1084
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 248/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 654 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 713
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 714 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 771
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +V GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 772 RLAVGCVVELVFKVTTGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 828
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 829 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GXXPQVGTGPGV 886
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 887 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 946
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 947 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1006
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 1007 QRPNANAVRSMEKVMEIHSKYWRCLQRTASTAGRSL-------IEAQTCENEEAETVTAM 1059
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1060 ASLSVGV 1066
>gi|380787399|gb|AFE65575.1| histone deacetylase 4 [Macaca mulatta]
gi|383423199|gb|AFH34813.1| histone deacetylase 4 [Macaca mulatta]
Length = 1084
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 654 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 713
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 714 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 771
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 772 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 828
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 829 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 886
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 887 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 946
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 947 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1006
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 1007 QRPNANAVRSMEKVMEIHSKYWRCLQRATSTAGRSL-------IEAQTCENEEAETVTAM 1059
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1060 ASLSVGV 1066
>gi|30913097|sp|Q8WUI4.2|HDAC7_HUMAN RecName: Full=Histone deacetylase 7; Short=HD7; AltName:
Full=Histone deacetylase 7A; Short=HD7a
gi|119578356|gb|EAW57952.1| histone deacetylase 7A, isoform CRA_a [Homo sapiens]
Length = 952
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 514 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 573
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 574 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 633
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 634 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 693
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 694 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 748
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 749 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 808
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 809 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 868
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 869 EEGWKQKPNLNAIRSLEAVIRVHSKYW 895
>gi|397510897|ref|XP_003825820.1| PREDICTED: histone deacetylase 7 isoform 1 [Pan paniscus]
Length = 915
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 477 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 536
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 537 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 596
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 597 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 656
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 657 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 711
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 712 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 771
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 772 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 831
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 832 EEGWKQKPNLNAIRSLEAVIRVHSKYW 858
>gi|32879885|gb|AAP88773.1| histone deacetylase 7A [Homo sapiens]
Length = 614
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 176 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 235
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 236 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 295
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 296 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 355
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 356 QQSK---ASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 410
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 411 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 470
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 471 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 530
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 531 EEGWKQKPNLNAIRSLEAVIRVHSKYW 557
>gi|332815845|ref|XP_003309602.1| PREDICTED: histone deacetylase 4 [Pan troglodytes]
gi|397483918|ref|XP_003813136.1| PREDICTED: histone deacetylase 4 [Pan paniscus]
gi|410210722|gb|JAA02580.1| histone deacetylase 4 [Pan troglodytes]
gi|410255750|gb|JAA15842.1| histone deacetylase 4 [Pan troglodytes]
gi|410292208|gb|JAA24704.1| histone deacetylase 4 [Pan troglodytes]
gi|410353301|gb|JAA43254.1| histone deacetylase 4 [Pan troglodytes]
Length = 1084
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 654 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 713
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 714 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 771
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 772 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 828
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 829 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGV 886
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 887 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 946
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 947 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1006
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 1007 QRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSL-------IEAQTCENEEAETVTAM 1059
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1060 ASLSVGV 1066
>gi|348577311|ref|XP_003474428.1| PREDICTED: histone deacetylase 4-like [Cavia porcellus]
Length = 1111
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 249/420 (59%), Gaps = 33/420 (7%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 686 TGLVYDTLMLKHQCACGNTNSHPEHAGRIQSIWSRLQETGLRSKCECVRGRKATLEELQT 745
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSV 121
VH+E H L ++ ++ DS + +L ++I+ SS AA LA G V
Sbjct: 746 VHSEAHTLLYGTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSSAARLAVGCV 805
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R L +++IL
Sbjct: 806 VELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAR-LLQQR--LSVSRIL 862
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+
Sbjct: 863 IVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMA 920
Query: 242 WENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGY 296
+ G GD +YLA + +++P+A +F PD++++S+GFDA G PLGG ++ +
Sbjct: 921 FTGGLDPPMGDTEYLAAFRTVVMPIASEFAPDMVLVSSGFDAVEGHPAPLGGYNLSAKCF 980
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFEST 353
+ K+LM A G+IVLALEGG++L +I ++ AC++ LL E +P+ + P +
Sbjct: 981 GYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLQQRPNANA 1040
Query: 354 WRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
R ++ V + S +W L +L+S +I + E+E+ + T A L V +
Sbjct: 1041 VRSMEKVMEIHSKYWRCL-----QRLSSTVG--HSLIEAQKCENEEAETVTAMASLSVGV 1093
>gi|148539870|ref|NP_001091886.1| histone deacetylase 7 isoform d [Homo sapiens]
gi|40675316|gb|AAH64840.1| HDAC7 protein [Homo sapiens]
gi|119578361|gb|EAW57957.1| histone deacetylase 7A, isoform CRA_f [Homo sapiens]
Length = 954
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 516 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 575
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 576 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 635
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 636 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 695
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 696 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 750
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 751 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 810
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 811 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 870
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 871 EEGWKQKPNLNAIRSLEAVIRVHSKYW 897
>gi|426372301|ref|XP_004053064.1| PREDICTED: histone deacetylase 7 isoform 2 [Gorilla gorilla
gorilla]
Length = 952
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 514 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 573
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 574 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 633
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 634 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 693
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 694 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 748
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 749 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 808
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 809 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 868
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 869 EEGWKQKPNLNAIRSLEAVIRVHSKYW 895
>gi|168177301|pdb|3C0Y|A Chain A, Crystal Structure Of Catalytic Domain Of Human Histone
Deacetylase Hdac7
gi|168177302|pdb|3C0Y|B Chain B, Crystal Structure Of Catalytic Domain Of Human Histone
Deacetylase Hdac7
gi|168177303|pdb|3C0Y|C Chain C, Crystal Structure Of Catalytic Domain Of Human Histone
Deacetylase Hdac7
gi|168177304|pdb|3C0Z|A Chain A, Crystal Structure Of Catalytic Domain Of Human Histone
Deacetylase Hdac7 In Complex With Saha
gi|168177305|pdb|3C0Z|B Chain B, Crystal Structure Of Catalytic Domain Of Human Histone
Deacetylase Hdac7 In Complex With Saha
gi|168177306|pdb|3C0Z|C Chain C, Crystal Structure Of Catalytic Domain Of Human Histone
Deacetylase Hdac7 In Complex With Saha
gi|168177307|pdb|3C10|A Chain A, Crystal Structure Of Catalytic Domain Of Human Histone
Deacetylase Hdac7 In Complex With Trichostatin A (Tsa)
gi|168177308|pdb|3C10|B Chain B, Crystal Structure Of Catalytic Domain Of Human Histone
Deacetylase Hdac7 In Complex With Trichostatin A (Tsa)
gi|168177309|pdb|3C10|C Chain C, Crystal Structure Of Catalytic Domain Of Human Histone
Deacetylase Hdac7 In Complex With Trichostatin A (Tsa)
Length = 423
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 34 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 93
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 94 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 153
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 154 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 213
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 214 QQSKA---SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 268
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 269 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 328
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 329 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 388
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 389 EEGWKQKPNLNAIRSLEAVIRVHSKYW 415
>gi|397510899|ref|XP_003825821.1| PREDICTED: histone deacetylase 7 isoform 2 [Pan paniscus]
Length = 952
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 514 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 573
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 574 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 633
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 634 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 693
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 694 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 748
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 749 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 808
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 809 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 868
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 869 EEGWKQKPNLNAIRSLEAVIRVHSKYW 895
>gi|402744248|ref|NP_445901.1| histone deacetylase 4 [Rattus norvegicus]
gi|134034137|sp|Q99P99.2|HDAC4_RAT RecName: Full=Histone deacetylase 4; Short=HD4
Length = 1077
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 161/420 (38%), Positives = 246/420 (58%), Gaps = 33/420 (7%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 652 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 711
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSV 121
VH+E H L ++ ++ DS + +L ++I+ SS AA LA G V
Sbjct: 712 VHSEAHTLLYGTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCV 771
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++KIL
Sbjct: 772 VELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LNVSKIL 828
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+
Sbjct: 829 IVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMA 886
Query: 242 WENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGY 296
+ G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG ++ +
Sbjct: 887 FTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCF 946
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFEST 353
+ K+LM A G+IVLALEGG++L +I ++ AC++ LL E +P+ P +
Sbjct: 947 GYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANA 1006
Query: 354 WRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
++ V S +W L PT SL I + E+E+ + T A L V +
Sbjct: 1007 VHSMEKVMGIHSEYWRCLQRLSPTVGHSL-------IEAQKCENEEAETVTAMASLSVGV 1059
>gi|426372299|ref|XP_004053063.1| PREDICTED: histone deacetylase 7 isoform 1 [Gorilla gorilla
gorilla]
Length = 915
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 477 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 536
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 537 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 596
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 597 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 656
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 657 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 711
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 712 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 771
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 772 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 831
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 832 EEGWKQKPNLNAIRSLEAVIRVHSKYW 858
>gi|32482808|gb|AAP84704.1| histone deacetylase 7A variant 3 [Homo sapiens]
gi|119578357|gb|EAW57953.1| histone deacetylase 7A, isoform CRA_b [Homo sapiens]
Length = 915
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 477 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 536
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 537 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 596
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 597 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 656
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 657 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 711
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 712 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 771
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 772 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 831
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 832 EEGWKQKPNLNAIRSLEAVIRVHSKYW 858
>gi|410292210|gb|JAA24705.1| histone deacetylase 4 [Pan troglodytes]
Length = 1089
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 659 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 718
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 719 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 776
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 777 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 833
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 834 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGV 891
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 892 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 951
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 952 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1011
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 1012 QRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSL-------IEAQTCENEEAETVTAM 1064
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1065 ASLSVGV 1071
>gi|119578360|gb|EAW57956.1| histone deacetylase 7A, isoform CRA_e [Homo sapiens]
Length = 974
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 536 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 595
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 596 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 655
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 656 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 715
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 716 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 770
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 771 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 830
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 831 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 890
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 891 EEGWKQKPNLNAIRSLEAVIRVHSKYW 917
>gi|410257728|gb|JAA16831.1| histone deacetylase 7 [Pan troglodytes]
gi|410301164|gb|JAA29182.1| histone deacetylase 7 [Pan troglodytes]
Length = 954
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 516 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 575
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 576 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 635
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 636 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 695
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 696 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 750
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 751 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 810
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 811 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 870
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 871 EEGWKQKPNLNAIRSLEAVIRVHSKYW 897
>gi|71008885|ref|XP_758249.1| hypothetical protein UM02102.1 [Ustilago maydis 521]
gi|46097924|gb|EAK83157.1| hypothetical protein UM02102.1 [Ustilago maydis 521]
Length = 727
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 149/371 (40%), Positives = 222/371 (59%), Gaps = 7/371 (1%)
Query: 5 SGEGRTIKR-RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAK 63
SG ++ R R G +Y M H P HPE P RI I+ K + + + R + +
Sbjct: 73 SGPPSSLDRYRTGYVYSADMMLHVNPIDPDHPERPLRIFKIFMKFKESNLFARMKRVPIR 132
Query: 64 EAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAGSV 121
E ++ + VH ++ ++ D ++++ +S+Y+NE S+ AA L+ G
Sbjct: 133 EVAEEEVKLVHDHGIWEGVQRLAFYHPDVLKEQVQLLETNSSLYINEHSAYAARLSCGGA 192
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
IE+ VA G++ + FAIVRPPGHHAEP ++MGFC +NNVAVA +L R I K+L
Sbjct: 193 IELVNAVAAGQIQNGFAIVRPPGHHAEPQKSMGFCFFNNVAVATRVVL--RRHAHIKKVL 250
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRH-EFGTFYPANDDGFYTMIGEGPGLGYNINV 240
I+DWDVHHGN TQ+ F D VL+ S+HR+ E G+FYP + G + G GPG G ++N+
Sbjct: 251 ILDWDVHHGNGTQRAFEYDDNVLYISLHRYDEDGSFYPGSTYGNFDSAGTGPGEGRSVNI 310
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
PW + GDADYL ++H+++P+A +F PD++IISAGFDAA GDP+G RV+P G++ M
Sbjct: 311 PWLSQGMGDADYLYAFNHLVMPIAHEFQPDLVIISAGFDAADGDPIGLNRVSPGGFAQMT 370
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAV 360
L +QGK+ + LEGGYN ++++S LA ++VLL + A E S + V
Sbjct: 371 HLLTSLSQGKVAVVLEGGYNPEAVASSALAVVDVLLS-RNTAEPLETVASTSAAATVHCV 429
Query: 361 RKKLSAFWPTL 371
R+ +W +L
Sbjct: 430 RRFHQKWWKSL 440
>gi|268577235|ref|XP_002643599.1| C. briggsae CBR-HDA-4 protein [Caenorhabditis briggsae]
gi|57012770|sp|Q613L4.1|HDA4_CAEBR RecName: Full=Histone deacetylase 4
Length = 892
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 216/379 (56%), Gaps = 25/379 (6%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL YD M +H + H EN RI+ IW+KL G +C + AK+A + L
Sbjct: 482 TGLGYDPLMARHECVCSNNSNHVENGERIQRIWSKLTEEGHVAKCERITAKKASLEQLQM 541
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL----------NSIYLNEGSSE-AAYLAAG 119
VH++ + + + + D+ + L + Y N+ S++ AA LAAG
Sbjct: 542 VHSQTYTTFFAVSPTACLKIDANALPLKRFLQLPCGGIGIDSDTYFNDASTQIAARLAAG 601
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
++IE++ +VAEG L + FA +RPPGHHAE ++A+GFC +NNVAV A L + P + K
Sbjct: 602 TLIELSSQVAEGRLKNGFACIRPPGHHAEAEQALGFCFFNNVAVTAKVLQAKYP-VQCAK 660
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
I I+DWDVHHGN TQ F DP VL+ S+HRH+ G F+P G T IG+G G G+++N
Sbjct: 661 IAIIDWDVHHGNGTQLSFDDDPNVLYMSLHRHDNGNFFPGT--GSVTEIGKGAGKGFSVN 718
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGYS 297
+P+ G DA+YLA W ++ PV F PD I++SAGFDA G + LGG +TP +
Sbjct: 719 IPFSGGVMKDAEYLAAWRTVVEPVLASFCPDFILVSAGFDACHGHVNALGGYEITPEMFG 778
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG-----SSEAYPFES 352
M K L+ +A GK+VLALEGGYNL SIS + C+ L+ + AG S E P +S
Sbjct: 779 YMTKCLLSYANGKVVLALEGGYNLDSISAAAEQCVQALIGESDDAGRLCTDSLENLPNQS 838
Query: 353 TWRVIQAVRKKLSAFWPTL 371
+Q V FWP L
Sbjct: 839 ALETLQKVIAIHKGFWPAL 857
>gi|211826359|gb|AAH06453.2| HDAC7 protein [Homo sapiens]
Length = 530
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 92 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 151
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 152 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 211
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 212 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 271
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 272 QQSK---ASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 326
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 327 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 386
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 387 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 446
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 447 EEGWKQKPNLNAIRSLEAVIRVHSKYW 473
>gi|410257730|gb|JAA16832.1| histone deacetylase 7 [Pan troglodytes]
gi|410301166|gb|JAA29183.1| histone deacetylase 7 [Pan troglodytes]
gi|410349781|gb|JAA41494.1| histone deacetylase 7 [Pan troglodytes]
Length = 991
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 553 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 612
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 613 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 672
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 673 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 732
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 733 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 787
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 788 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 847
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 848 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 907
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 908 EEGWKQKPNLNAIRSLEAVIRVHSKYW 934
>gi|194382694|dbj|BAG64517.1| unnamed protein product [Homo sapiens]
Length = 974
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 536 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 595
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 596 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 655
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 656 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 715
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 716 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 770
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 771 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 830
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 831 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 890
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 891 EEGWKQKPNLNAIRSLEAVIRVHSKYW 917
>gi|5911907|emb|CAB55935.1| hypothetical protein [Homo sapiens]
Length = 878
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 440 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 499
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 500 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 559
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 560 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 619
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 620 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 674
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 675 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 734
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 735 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 794
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 795 EEGWKQKPNLNAIRSLEAVIRVHSKYW 821
>gi|383423197|gb|AFH34812.1| histone deacetylase 4 [Macaca mulatta]
Length = 1089
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 659 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 718
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 719 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 776
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 777 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 833
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 834 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 891
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 892 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 951
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 952 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1011
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 1012 QRPNANAVRSMEKVMEIHSKYWRCLQRATSTAGRSL-------IEAQTCENEEAETVTAM 1064
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1065 ASLSVGV 1071
>gi|119578359|gb|EAW57955.1| histone deacetylase 7A, isoform CRA_d [Homo sapiens]
Length = 700
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 262 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 321
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 322 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 381
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 382 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 441
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 442 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 496
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 497 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 556
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 557 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 616
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 617 EEGWKQKPNLNAIRSLEAVIRVHSKYW 643
>gi|169234807|ref|NP_056216.2| histone deacetylase 7 isoform a [Homo sapiens]
gi|33415445|gb|AAQ18232.1| histone deacetylase [Homo sapiens]
gi|194387788|dbj|BAG61307.1| unnamed protein product [Homo sapiens]
gi|224487805|dbj|BAH24137.1| histone deacetylase 7 [synthetic construct]
Length = 991
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 553 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 612
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 613 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 672
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 673 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 732
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 733 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 787
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 788 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 847
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 848 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 907
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 908 EEGWKQKPNLNAIRSLEAVIRVHSKYW 934
>gi|221044224|dbj|BAH13789.1| unnamed protein product [Homo sapiens]
Length = 668
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 252/427 (59%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 238 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 297
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 298 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 355
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 356 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 412
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 413 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 470
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 471 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 530
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 531 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 590
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T T+ ++ +I + E+E+ + T
Sbjct: 591 QRPNANAVRSMEKVMEIHSKYWRCLQR---TTFTAGRS----LIEAQTCENEEAETVTAM 643
Query: 407 AVLQVAL 413
A L V +
Sbjct: 644 ASLSVGV 650
>gi|343429070|emb|CBQ72644.1| related to HDA1-histone deacetylase A [Sporisorium reilianum SRZ2]
Length = 737
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 212/363 (58%), Gaps = 6/363 (1%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+ R G +Y M H P HPE P RI I+ K + + QR +N +E + +L
Sbjct: 80 RYRTGYVYSSEMMLHVNPIDRDHPERPLRIWKIYLKFKHRDLFQRMKRINIREVAEDEVL 139
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
VH + + +K + D ++++ +S+Y+NE S+ AA L+ G IE+ + VA
Sbjct: 140 LVHDKGIWDGVKRSALVHPDLLKEQVLMLESTSSLYVNEHSAYAARLSCGGAIELCDAVA 199
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
G + + FAIVRPPGHHAEP ++MGFC +NNVAVA ++ + I K+LI+DWDVHH
Sbjct: 200 AGRIKNGFAIVRPPGHHAEPHKSMGFCFFNNVAVATRHVMRQHDH--IKKVLILDWDVHH 257
Query: 190 GNSTQKMFWKDPRVLFFSVHRH-EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
GN TQ+ F D VL+ S+HR+ E G+FYP + G Y +G G G G ++NVPW G
Sbjct: 258 GNGTQRAFEDDGDVLYISLHRYDEDGSFYPGSTYGHYESVGVGAGEGKSVNVPWPAPGMG 317
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
DADYL + H+++P+A +F PD++I+SAGFDAA GDP+G +V+P G++ M L Q
Sbjct: 318 DADYLYAFHHLVMPIAHEFQPDLVIVSAGFDAADGDPIGLNKVSPGGFAQMTHLLTSLCQ 377
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
GK+ + LEGGYN +++NS LA VLL A E + VR+ + W
Sbjct: 378 GKVAVVLEGGYNPDAVANSALAVTEVLLSLN-TAAPRETAACSIAANTVHEVRRHHAKHW 436
Query: 369 PTL 371
L
Sbjct: 437 KCL 439
>gi|195396689|ref|XP_002056961.1| GJ16814 [Drosophila virilis]
gi|194146728|gb|EDW62447.1| GJ16814 [Drosophila virilis]
Length = 1229
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 225/386 (58%), Gaps = 36/386 (9%)
Query: 12 KRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 799 KITTGLAYDPLMLKHACICGDNAPHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 858
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEGSSE-A 113
L +VHTE H L S Q R ++ S L++ ++ NE + A
Sbjct: 859 LQTVHTEAHAMLF---GSNQGQLTRPKLESTLSASFVRLSCGGLGVDLDTTWNEHHTAIA 915
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 916 ARMAAGCVIDLAFKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRVP 975
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E+ +ILI DVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 976 EM--KRILI---DVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGAGAG 1028
Query: 234 LGYNINVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGG 288
LGYN+N+ W N GDA+Y+A + +++P+AK F PDI+++S+GFDAA G PLGG
Sbjct: 1029 LGYNVNISWSGALNPPLGDAEYIAAFRTVVMPIAKCFNPDIVLVSSGFDAATGHPAPLGG 1088
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSS- 345
V+P + +M ++L+ A GK+VLALEGGY+L +I +S C+ LL D P+ S
Sbjct: 1089 YHVSPACFGLMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPILPSEL 1148
Query: 346 EAYPFESTWRVIQAVRKKLSAFWPTL 371
E P ++ +Q WP +
Sbjct: 1149 ERPPCQNAINTLQKTIAIQQTHWPCV 1174
>gi|156050425|ref|XP_001591174.1| hypothetical protein SS1G_07799 [Sclerotinia sclerotiorum 1980]
gi|154692200|gb|EDN91938.1| hypothetical protein SS1G_07799 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 778
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 214/360 (59%), Gaps = 38/360 (10%)
Query: 15 VGLLYDERMCKH-------NTPDGDYHPENPNRIKAIWNKLQAAGI-------------- 53
G YD+RM H NTP HPE+P RI+AI + AG+
Sbjct: 86 TGCCYDDRMKLHAIGDFSDNTP----HPEDPRRIEAIMRAFKEAGLLYTGSPEDVDRILK 141
Query: 54 --PQRCVV-LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDR---IASKLNSIYLN 107
P + ++ + A+ A + +VH H ++++S K + R+ + + S+Y+
Sbjct: 142 ESPTKYMLRIPARVASKDEICTVHYAGHFEWVESLSKKTSEDLRELNTIMDAGRKSLYVG 201
Query: 108 EGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASF 167
+ EAA ++AG IE + V EG + +A A++RPPGHHAE +E++GFC++NNV VAA
Sbjct: 202 LCTFEAALISAGGAIETCKNVVEGHVKNAIAVIRPPGHHAEANESLGFCVFNNVPVAAKI 261
Query: 168 LLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD----- 222
+ + P+L K+LI+DWD+HHGN TQ MF++DP VL+ S+H +E G FYP D
Sbjct: 262 CMLDYPKL-CRKVLILDWDIHHGNGTQNMFYEDPNVLYISLHVYENGNFYPGQPDDPDLP 320
Query: 223 -GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAA 281
G +G G G+G N+N+ W + GD +Y+A + I++P+A++F PD++IISAGFDAA
Sbjct: 321 DGGIDKVGTGAGIGKNVNIGWPSQGMGDGEYMAAFQKIVMPIAQEFDPDLVIISAGFDAA 380
Query: 282 AGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPV 341
AGD LGGC VTP YS M LM A GK+ + LEGGYNL +IS S LA L+ + P+
Sbjct: 381 AGDELGGCFVTPGCYSHMTHMLMSLAGGKVAVCLEGGYNLKAISRSALAVAKTLMGEPPI 440
>gi|407926710|gb|EKG19671.1| Histone deacetylase superfamily [Macrophomina phaseolina MS6]
Length = 894
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/375 (42%), Positives = 224/375 (59%), Gaps = 26/375 (6%)
Query: 14 RVGLLYDERMCKHNTP------DGDYHPENPNRIKAIWNKLQAAGI---PQRCV------ 58
R GL+YD RM H P + D HPE+P RI I+N+L +G+ P V
Sbjct: 116 RSGLVYDVRMRFHTEPLDAMLSEDDIHPEDPRRIMEIFNELAESGLVETPSHHVPDPDFS 175
Query: 59 --VLNAKEAKDKNLLSVHTENH---VNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEA 113
+NA+ A ++ + VHT +H V +N S + + +AS ++S+YL+ +
Sbjct: 176 LWRINARPATEEEICLVHTRDHYARVREYQNFSQEILN----EMASDMDSVYLHPATFSC 231
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A L+AG IE A V G + +A A++RPPGHHAE D GFC +NNV+VAA + P
Sbjct: 232 ASLSAGGAIEAARAVVAGHVRNAVAVIRPPGHHAEHDAPGGFCFFNNVSVAARVCQQDFP 291
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
+ KILI+DWDVHHGN Q+ F+ DP VL+ S+H H GTFYP+N+ G +T GEGPG
Sbjct: 292 D-KCRKILILDWDVHHGNGVQRAFYSDPNVLYISIHVHMNGTFYPSNNYGDHTHCGEGPG 350
Query: 234 LGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTP 293
G N+N+PW + GD DY+ + I++P+A++F PD++I++AGFDAAAGD LG C VTP
Sbjct: 351 EGKNVNIPWSSQGMGDGDYIFAFQQIVMPIAQEFDPDLVIVAAGFDAAAGDRLGKCFVTP 410
Query: 294 YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST 353
Y+ M LM A+GK+V+ LEGGYNL SI+ S +A L+ + P E P
Sbjct: 411 PCYAHMTHMLMSLAKGKVVVCLEGGYNLQSIAKSAVAVTRTLMGEPP-DRLEELEPSPLG 469
Query: 354 WRVIQAVRKKLSAFW 368
++ V++ S +W
Sbjct: 470 LSTVELVKRYQSRYW 484
>gi|34782905|gb|AAH20505.2| HDAC7 protein [Homo sapiens]
Length = 711
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 273 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 332
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 333 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 392
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 393 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 452
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 453 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 507
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 508 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 567
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 568 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 627
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 628 EEGWKQKPNLNAIRSLEAVIRVHSKYW 654
>gi|194211882|ref|XP_001490035.2| PREDICTED: histone deacetylase 7-like isoform 1 [Equus caballus]
Length = 989
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 227/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 551 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 610
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 611 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 670
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 671 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 730
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 731 QQG---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 785
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++PVA++F PD++++SAGFDAA G
Sbjct: 786 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPVAREFSPDLVLVSAGFDAAEGHPA 845
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 846 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 905
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 906 EEGWKQKPNLNAIRSLEAVIRVHSKYW 932
>gi|410046811|ref|XP_522368.4| PREDICTED: histone deacetylase 7 [Pan troglodytes]
Length = 1247
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 809 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 868
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 869 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 928
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 929 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 988
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 989 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 1043
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 1044 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 1103
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 1104 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 1163
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 1164 EEGWKQKPNLNAIRSLEAVIRVHSKYW 1190
>gi|308489209|ref|XP_003106798.1| CRE-HDA-4 protein [Caenorhabditis remanei]
gi|308253452|gb|EFO97404.1| CRE-HDA-4 protein [Caenorhabditis remanei]
Length = 832
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/389 (40%), Positives = 220/389 (56%), Gaps = 25/389 (6%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL YD M KH G+ H EN RI++IW+KL G QRC + AK+A + L
Sbjct: 425 TGLAYDPSMVKHECTCGNNASHVENGGRIQSIWSKLIEHGHVQRCEKVTAKKASLEQLQL 484
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL----------NSIYLNEGSSE-AAYLAAG 119
VH++ + + + + D+ + L + Y N+ S++ AA LAAG
Sbjct: 485 VHSQTYTTFFAVSPTACLKIDANSLPLKRFLQLPCGGIGVDSDTYFNDASTQTAARLAAG 544
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
++IE++ +VAEG L + FA +RPPGHHAE ++AMGFC +NNVAV A L ++ PE K
Sbjct: 545 TLIELSSQVAEGRLKNGFACIRPPGHHAEHEQAMGFCFFNNVAVTAKVLQSKYPE-QCAK 603
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
I I+DWDVHHGN TQ F +DP VL+ S+HRH+ G F+P G IG+ G G+ +N
Sbjct: 604 IAIIDWDVHHGNGTQLSFEEDPNVLYVSLHRHDNGNFFPGT--GSVVEIGKNNGKGFTVN 661
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYS 297
+P+ D +YLA W ++ P+ F PD I++SAGFDA G P LGG ++P +
Sbjct: 662 IPFSGDVMKDPEYLAAWRTVVEPILSSFCPDFILVSAGFDACHGHPNALGGYEISPEMFG 721
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG-----SSEAYPFES 352
M K L+ +A GK+VLALEGGY+L SIS S C+ L+ + AG + E P +S
Sbjct: 722 YMTKSLLGYANGKVVLALEGGYDLTSISASAEQCVQALIGESDDAGRLSSAALETLPNQS 781
Query: 353 TWRVIQAVRKKLSAFWPTLADELPTKLTS 381
+Q V +WP L + T T+
Sbjct: 782 ALETLQKVIAIHKGYWPALHGQEATICTT 810
>gi|354492407|ref|XP_003508340.1| PREDICTED: histone deacetylase 4-like [Cricetulus griseus]
Length = 1077
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 217/340 (63%), Gaps = 23/340 (6%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 652 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 711
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSV 121
VH+E H L ++ ++ DS + +L ++I+ SS AA LA G V
Sbjct: 712 VHSEAHTLLYGTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCV 771
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R L ++KIL
Sbjct: 772 VELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR--LNVSKIL 828
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+
Sbjct: 829 IVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMA 886
Query: 242 WENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGY 296
+ G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG ++ +
Sbjct: 887 FTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCF 946
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
+ K+LM A G+IVLALEGG++L +I ++ AC++ LL
Sbjct: 947 GYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALL 986
>gi|193885224|pdb|2VQO|A Chain A, Structure Of Hdac4 Catalytic Domain With A
Gain-Of-Function Muation Bound To A
Trifluoromethylketone Inhbitor
gi|193885225|pdb|2VQO|B Chain B, Structure Of Hdac4 Catalytic Domain With A
Gain-Of-Function Muation Bound To A
Trifluoromethylketone Inhbitor
gi|194368578|pdb|2VQV|A Chain A, Structure Of Hdac4 Catalytic Domain With A
Gain-Of-Function Mutation Bound To A Hydroxamic Acid
Inhibitor
gi|194368579|pdb|2VQV|B Chain B, Structure Of Hdac4 Catalytic Domain With A
Gain-Of-Function Mutation Bound To A Hydroxamic Acid
Inhibitor
Length = 413
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 245/418 (58%), Gaps = 42/418 (10%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 10 TGLVYDTLMLKHQCTAGSSSSHPEHAGRIQSIWSRLQETGLRGKCEAIRGRKATLEELQT 69
Query: 73 VHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 70 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 127
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 128 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 184
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 185 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 242
Query: 235 GYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 243 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 302
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGGY+L +I ++ AC++ LL E P+ +
Sbjct: 303 NLSARCFGYLTKQLMGLAGGRIVLALEGGYDLTAICDASEACVSALLGNELDPLPEKVLQ 362
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVET 404
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 363 QRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSL-------IEAQTCENEEAETVT 413
>gi|402889841|ref|XP_003908208.1| PREDICTED: histone deacetylase 4-like, partial [Papio anubis]
Length = 618
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 188 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 247
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 248 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 305
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 306 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 362
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 363 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGV 420
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 421 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 480
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 481 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 540
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 541 QRPNANAVRSMEKVMEIHSKYWRCLQRATSTAGRSL-------IEAQTCENEEAETVTAM 593
Query: 407 AVLQVAL 413
A L V +
Sbjct: 594 ASLSVGV 600
>gi|149037568|gb|EDL91999.1| histone deacetylase 4 (predicted), isoform CRA_b [Rattus norvegicus]
Length = 1055
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 625 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 684
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 685 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 742
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 743 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 799
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 800 LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 857
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 858 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 917
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E +P+
Sbjct: 918 NLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLH 977
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + ++ V S +W L PT SL I + E+E+ + T
Sbjct: 978 QRPNANAVHSMEKVMGIHSEYWRCLQRLSPTVGHSL-------IEAQKCENEEAETVTAM 1030
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1031 ASLSVGV 1037
>gi|149037567|gb|EDL91998.1| histone deacetylase 4 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 966
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 536 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 595
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 596 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 653
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 654 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 710
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 711 LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 768
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 769 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 828
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E +P+
Sbjct: 829 NLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLH 888
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + ++ V S +W L PT SL I + E+E+ + T
Sbjct: 889 QRPNANAVHSMEKVMGIHSEYWRCLQRLSPTVGHSL-------IEAQKCENEEAETVTAM 941
Query: 407 AVLQVAL 413
A L V +
Sbjct: 942 ASLSVGV 948
>gi|121719281|ref|XP_001276342.1| histone deacetylase hda1 [Aspergillus clavatus NRRL 1]
gi|119404540|gb|EAW14916.1| histone deacetylase hda1 [Aspergillus clavatus NRRL 1]
Length = 805
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 204/338 (60%), Gaps = 15/338 (4%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----PQRCVV------LNA 62
GL YD +M H P D HPE+P RI I+ +L AG+ R +V ++A
Sbjct: 135 GLCYDVQMRYHCEVRPTADVHPEDPRRIYYIYKELCRAGLVDDPESSRPLVARPLKRIHA 194
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A ++ + VHT +H +++ + D + +SIY N+ + +A L+ G I
Sbjct: 195 RNATEEEVSLVHTPDHFAFVES-TKDMSDDELIALEHTRDSIYFNKLTFASALLSTGGAI 253
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV+VAA + E KILI
Sbjct: 254 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQKQLGE-SCRKILI 312
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN QK F+ DP VL+ S+H ++ G +YP D+G + G G GLG N+N+PW
Sbjct: 313 VDWDVHHGNGIQKAFYDDPNVLYISLHVYQDGKYYPGGDEGDWDHCGAGAGLGRNVNIPW 372
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GD DY+ + +++P+A++F PD++I+++GFDAAAGD LGGC VTP Y+ M
Sbjct: 373 PSQGMGDGDYMYAFQQVVMPIAQEFNPDLVIVASGFDAAAGDELGGCFVTPPCYAHMTHM 432
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
LM A GK+ + LEGGYN SIS S LA L+ D P
Sbjct: 433 LMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGDPP 470
>gi|254576937|ref|XP_002494455.1| ZYRO0A01870p [Zygosaccharomyces rouxii]
gi|238937344|emb|CAR25522.1| ZYRO0A01870p [Zygosaccharomyces rouxii]
Length = 707
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 201/345 (58%), Gaps = 20/345 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ GL YD RM H Y HPE+P RI I+ L G I +
Sbjct: 59 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGEDDIGE 118
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ + +EA + LL VHT+ H+ I+ S + + +S+Y N S AA
Sbjct: 119 LMLKIPVREATVEELLQVHTKEHLEFIEKTSQMNREELLKETETG-DSVYFNSDSYSAAK 177
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L G IE + V EG + +A A++RPPGHHAEP+ A GFCL++NVAVAA +L PE
Sbjct: 178 LPCGGAIEACKAVVEGRVKNALAVIRPPGHHAEPEMAGGFCLFSNVAVAAQNILKNYPE- 236
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +ILI+DWD+HHGN TQK F+ D RVL+ S+HR E G +YP G Y GEG G G
Sbjct: 237 SVRRILILDWDIHHGNGTQKAFYNDDRVLYISLHRFELGKYYPGTIHGQYDQTGEGKGEG 296
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N N+ W G GDA+Y+ ++ I++P+A+++ PD++IIS+GFDAA GD +G C V+P
Sbjct: 297 FNCNITWPVGGVGDAEYMLAFEQIVMPMAREYRPDLVIISSGFDAADGDTIGQCHVSPSC 356
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + +ALEGGYNL +I+ S L+ +L+ + P
Sbjct: 357 YGHMTHMLKSLARGNLCVALEGGYNLDAIATSALSVAKILIGEPP 401
>gi|342319424|gb|EGU11373.1| Histone deacetylase clr3 [Rhodotorula glutinis ATCC 204091]
Length = 881
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/391 (40%), Positives = 231/391 (59%), Gaps = 26/391 (6%)
Query: 4 KSGEGRTIKRRVGLLYDERMCKH-----NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCV 58
K G GR G Y RM H D HPE P RI I+NKL G+ R V
Sbjct: 173 KMGLGRAPS---GFCYSARMTLHAPLPKTVDSNDPHPEQPARITGIFNKLLNGGLTSRMV 229
Query: 59 VLNAKEAKDKNLLSVHTENHVNLIK--NISSKQFDSRRDRIASKLNSIYLNEGSSEAAYL 116
+ +EA + ++ VH+E H ++ + ++ +L S+Y+N S+ A L
Sbjct: 230 RVQVREALREEVMLVHSEGHWERVRATGFQTIEYLETCKEFFERL-SLYVNPDSAFCARL 288
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL-------- 168
+ G VIE+A VAEG++ + FAIVRPPGHHAEP+EAMGFC +NN AVAA +L
Sbjct: 289 SCGGVIEMARAVAEGQIRNGFAIVRPPGHHAEPEEAMGFCFFNNAAVAAKWLRTVYGSGT 348
Query: 169 ---LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFY 225
+N + E+ +N+ILI+DWDVHHGN TQ+ F D +L+ S+HRH G FYP D G
Sbjct: 349 QKDVNGK-EIKMNRILILDWDVHHGNGTQRAFEDDDDILYISLHRHGNG-FYPGGDYGAL 406
Query: 226 TMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP 285
+G G G G+++N+P+ N GDADYL + +I++P+A ++ PD++I+SAG+DAA GD
Sbjct: 407 ESVGSGKGRGFSVNIPFMNEGMGDADYLYAFQNIVMPIAYEYAPDLVIVSAGYDAAKGDE 466
Query: 286 LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK-PVAGS 344
LG V+P GY+ M L A GK++LALEGGYN+ +I+ S AC+ V++ D+ PV S
Sbjct: 467 LGKMNVSPDGYAHMTHMLSALAGGKLLLALEGGYNVNAIAESAYACVKVIVGDELPVMSS 526
Query: 345 SEAYPFESTWRVIQAVRKKLSAFWPTLADEL 375
A +T + VR+ + +W + + +
Sbjct: 527 IGAASLAAT-NTVHDVRRMQAQYWKCMGEAV 556
>gi|406604970|emb|CCH43643.1| histone deacetylase 6/10 [Wickerhamomyces ciferrii]
Length = 760
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 201/348 (57%), Gaps = 20/348 (5%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------ 52
I + GL YD RM H Y HPE+P RI I+ L AG
Sbjct: 107 IPLKTGLCYDVRMRYHAKIFTSYYEYIDPHPEDPRRIYRIYKILAEAGLIKDPTLSGIED 166
Query: 53 IPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSE 112
I + L +EAK + +L VHTE H+ +++ +S + + K +S+Y N S
Sbjct: 167 IGDLMLKLPVREAKAEEILQVHTEEHLKFLESTNSMTKEKLMEE-TEKGDSVYFNHDSYL 225
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
A L+ G IE + V EG++ +A A+VRPPGHHAEPD GFCL++NVAVAA +L
Sbjct: 226 GAKLSCGGTIEACKAVVEGKVKNALAVVRPPGHHAEPDTPGGFCLFSNVAVAAKNILKNY 285
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + +I+I+DWDVHHGN TQK F+ DPRVL+ S+HR+E G +YP G G G
Sbjct: 286 PE-SVKRIVILDWDVHHGNGTQKAFYDDPRVLYISLHRYEQGKYYPGTLAGAANQCGGGA 344
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G N+N+PW G GD DY+ + +++P+ +F PD++IIS+GFDAA GD +G C V+
Sbjct: 345 AEGSNVNIPWPVGGMGDGDYIYAFRKVIMPICYEFDPDLVIISSGFDAADGDMIGQCHVS 404
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
P Y M L A+G + + LEGGYNL SI+ S LA VL+ + P
Sbjct: 405 PGAYGHMTHMLKSLAKGNLCVVLEGGYNLDSIAVSALAVAKVLVGEPP 452
>gi|392865409|gb|EAS31193.2| histone deacetylase clr3 [Coccidioides immitis RS]
Length = 760
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/378 (40%), Positives = 219/378 (57%), Gaps = 24/378 (6%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-----------IPQRCVVLNA 62
G+ YD RM H P D HPE+P RI I+ +L AG + Q + + A
Sbjct: 120 GVCYDIRMRYHCEVKPTLDVHPEDPRRIYYIYKELCKAGLVDDPDASRPLVSQPLLRIPA 179
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAGS 120
++A + + +H H + + +S+K S + IA S +SIY N + +A LA G
Sbjct: 180 RDATHEEISLIHDSEHYDFV--LSTKDM-SEDELIALESTRDSIYFNTLTFTSAILACGG 236
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
IE + V G++ +A A++RPPGHHAE +AMGFCL+NNV+VAA + + + KI
Sbjct: 237 AIETCKAVVSGKVKNAIAVIRPPGHHAEQCQAMGFCLFNNVSVAAR-VCQKTFKDKCRKI 295
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
+IVDWDVHHGN Q F+ DP VL+ S+H ++ G FYP + G + GEG GLG N+N+
Sbjct: 296 MIVDWDVHHGNGVQNAFYDDPNVLYISLHVYKDGAFYPGGEQGNWDHCGEGNGLGKNVNI 355
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
PW GD DYL + +++P+ +F PD++IISAGFDAAAGD LGGC VTP Y+ M
Sbjct: 356 PWPTQGMGDGDYLYAFQEVIMPIGYEFNPDLVIISAGFDAAAGDELGGCFVTPPCYAHMT 415
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP--VAGSSEAYPFESTWRVIQ 358
LM+ A GK+ + LEGGYN SIS S LA L+ + P + G+ + ST R +
Sbjct: 416 SMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEPPDRLIGAGASQAGVSTVRKVT 475
Query: 359 AVRKKLSAFWPTLADELP 376
++ K +W + + P
Sbjct: 476 MIQSK---YWQCMYPKGP 490
>gi|344242476|gb|EGV98579.1| Histone deacetylase 4 [Cricetulus griseus]
Length = 966
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 217/340 (63%), Gaps = 23/340 (6%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 541 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 600
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSV 121
VH+E H L ++ ++ DS + +L ++I+ SS AA LA G V
Sbjct: 601 VHSEAHTLLYGTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCV 660
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R L ++KIL
Sbjct: 661 VELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR--LNVSKIL 717
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+
Sbjct: 718 IVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMA 775
Query: 242 WENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGY 296
+ G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG ++ +
Sbjct: 776 FTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCF 835
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
+ K+LM A G+IVLALEGG++L +I ++ AC++ LL
Sbjct: 836 GYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALL 875
>gi|47216260|emb|CAG05956.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1014
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 215/348 (61%), Gaps = 29/348 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ R+++IW++LQ G+ RC + +EA + S
Sbjct: 572 TGLVYDSLMLKHQCICGNAHIHPEHAGRVQSIWSRLQETGLLGRCERIRGREASLDEIQS 631
Query: 73 VHTENHVNLIKN--ISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ + D ++ I+ K+ ++++ SS A
Sbjct: 632 VHSEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 691
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A GSVIE+A RVA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A L + ++
Sbjct: 692 MAVGSVIELAFRVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKM 748
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
G+ KILIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G G
Sbjct: 749 GVGKILIVDWDIHHGNGTQQAFYSDPSVLYISLHRYDDGNFFPGS--GAPEEVGSGAGNG 806
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
+N+N+ W G GD +YL + ++++P+A+ F PD++++SAGFDA G PLGG
Sbjct: 807 FNVNIAWTGGVEPPMGDVEYLTAFRYVVMPIAQHFSPDVVLVSAGFDAVEGHQSPLGGYN 866
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
V+ + + + LMD A G++V+ALEGG++L +I ++ AC++ LL D
Sbjct: 867 VSAKCFGRLTQLLMDLAGGRVVMALEGGHDLTAICDASEACVSALLGD 914
>gi|345791908|ref|XP_543715.3| PREDICTED: histone deacetylase 7 isoform 1 [Canis lupus familiaris]
Length = 1148
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 227/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 710 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 769
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 770 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 829
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 830 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 889
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILI+DWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 890 QQG---KASKILIMDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 944
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 945 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRMVVMPIAREFSPDLVLVSAGFDAAEGHPA 1004
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 1005 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 1064
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 1065 EEGWKQKPNLNAIRSLEAVIRVHSKYW 1091
>gi|449270997|gb|EMC81633.1| Histone deacetylase 9, partial [Columba livia]
Length = 1052
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+Y HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 629 TGVVYDNLMLKHQCMCGNYANHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQL 688
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E+H L ++ ++ D R+ ++ KL S+ G S+ AA
Sbjct: 689 VHSEHHSLLYGTSPLNRQKLDPRKLLGNVSQKLFSLLPCGGLGVDSDTVWNELHSAGAAR 748
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A RVA EL + FA+VRPPGHHAE AMGFC +N++A+ A +L R +L
Sbjct: 749 MAVGCVIELAARVASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYL---RDKL 805
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G GPG G
Sbjct: 806 NIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGS--GAPNEVGSGPGEG 863
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + +++P A +F P+I+++SAGFDA G PLGG +
Sbjct: 864 YNINIAWTGGLNPPMGDVEYLTAFRTVIMPAANEFEPEIVLVSAGFDAVEGHDPPLGGYK 923
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + K+L+ A G++VLALEGG++L +I ++ AC+N LL
Sbjct: 924 VTAKCFGHLTKQLLKLADGRVVLALEGGHDLTAICDASEACINALL 969
>gi|344292516|ref|XP_003417973.1| PREDICTED: histone deacetylase 4-like [Loxodonta africana]
Length = 1080
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/431 (37%), Positives = 249/431 (57%), Gaps = 50/431 (11%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 650 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRSQCECIRGRKATLEELQT 709
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 710 VHSEAHALLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 767
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 768 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 824
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L +++ILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 825 LSVSRILIVDWDVHHGNGTQQAFYSDPSVLYISLHRYDDGNFFPGS--GAPDEVGTGPGV 882
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YL + +++PVA +F PD++++S+GFDA G PLGG
Sbjct: 883 GFNVNMAFTGGLDPPMGDAEYLTAFRTVVMPVAVEFAPDVVLVSSGFDAVEGHPTPLGGY 942
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL-------LEDKPVA 342
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ L L +K +
Sbjct: 943 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKTLQ 1002
Query: 343 GSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKV 402
S A S +VI+ K +W +L T SL + + E+E+ +
Sbjct: 1003 QRSNANAIRSMEKVIEIHSK----YWRSLQRTASTVGYSL-------VEAQKCENEEAET 1051
Query: 403 ETLEAVLQVAL 413
T A L V +
Sbjct: 1052 VTAMASLSVGV 1062
>gi|348580245|ref|XP_003475889.1| PREDICTED: histone deacetylase 7-like isoform 2 [Cavia porcellus]
Length = 900
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 235/387 (60%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
+T+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 462 KTLPFITGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 521
Query: 67 DKNLLSVHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEG 109
+ L SVH+E H+ L +S + D+ + + +A ++ ++I+
Sbjct: 522 LEELQSVHSERHMLLYGTNPLSRLKLDNEKLSELLAQRMFVMLPCGGVGVDTDTIWNELH 581
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 582 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 641
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 642 QQG---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVEEVG 696
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 697 AGSGEGFNVNVAWAGGLEPPMGDPEYLAAFRIVVMPIAQEFSPDLVLVSAGFDAAEGHPA 756
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 757 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 816
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E++ P + R ++AV + S +W
Sbjct: 817 EESWKQKPNLNAIRSLEAVIRVHSKYW 843
>gi|195927326|pdb|2VQW|G Chain G, Structure Of Inhibitor-Free Hdac4 Catalytic Domain (With
Gain-Of-Function Mutation His332tyr)
Length = 413
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 245/418 (58%), Gaps = 42/418 (10%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 10 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 69
Query: 73 VHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 70 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 127
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 128 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 184
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 185 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 242
Query: 235 GYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 243 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 302
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGGY+L +I ++ AC++ LL E P+ +
Sbjct: 303 NLSARCFGYLTKQLMGLAGGRIVLALEGGYDLTAICDASEACVSALLGNELDPLPEKVLQ 362
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVET 404
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 363 QRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSL-------IEAQTCENEEAETVT 413
>gi|380492726|emb|CCF34396.1| histone deacetylase [Colletotrichum higginsianum]
Length = 745
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 218/393 (55%), Gaps = 36/393 (9%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----PQRCVV- 59
RR GLL YD+RM H D +HPE+P RI+ I+ + AG+ P+ +
Sbjct: 66 RRRGLLPTACCYDDRMKLHVNADFGTTPHHPEDPRRIEEIYKAFKRAGLVYTGPESKIAD 125
Query: 60 ------------LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRD---RIASKLNSI 104
+ +EA + +L+ HT H + ++++S + RD S+
Sbjct: 126 VMRDTPTKYMWRIGTREATKEEILTTHTPLHYHWVESLSKMNYTELRDTSRHYDQGRASL 185
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y+ + AA L+ G I+ + V EG + +AFAI+RPPGHHAE D+ +GFC +NNV VA
Sbjct: 186 YVGSLTFTAALLSCGGAIDTCKHVVEGNVKNAFAIIRPPGHHAEYDQPLGFCFFNNVPVA 245
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD-- 222
E PE K+LI+DWDVHHGN Q +F+ DP VL+ S+H ++ G FYP D
Sbjct: 246 VKICQQEYPE-DCRKVLILDWDVHHGNGIQNIFYDDPNVLYVSLHVYQNGIFYPGKPDNQ 304
Query: 223 ----GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
G G GPGLG NIN+ W + GD +Y+A + I++P+AK+F PD+++ISAGF
Sbjct: 305 EIPDGGLEHCGTGPGLGKNINIGWHDQGMGDGEYMAAFQKIIMPIAKEFNPDLVVISAGF 364
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
DAAAGD LGGC VTP Y+ M LM A GK+ + LEGGYNL +IS S +A L+ +
Sbjct: 365 DAAAGDELGGCFVTPTCYAHMTHMLMSLADGKVAVCLEGGYNLQAISTSAVAVARTLMGE 424
Query: 339 KPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
P ++ RV+ V+ + +W +
Sbjct: 425 PPPKMEIPMLNKDAA-RVLAKVQSYQAPYWECM 456
>gi|350594076|ref|XP_003359749.2| PREDICTED: histone deacetylase 4-like [Sus scrofa]
Length = 1517
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/427 (37%), Positives = 251/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 1087 TGLVYDTLMLKHQCACGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 1146
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYLN----------------EGSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ SS AA
Sbjct: 1147 VHSEAHALLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWSEVHSSGAA 1204
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+A +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 1205 RLAVGCVVELAFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 1261
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++K L+VDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 1262 LHVSKTLVVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGV 1319
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 1320 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 1379
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 1380 NLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1439
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P++++ R ++ V S +W +L T SL + + E+E+ + T
Sbjct: 1440 QRPYDNSVRSMEKVIDIHSQYWRSLQRLASTVGYSL-------VEAQKCENEEAETVTAM 1492
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1493 ASLSVGV 1499
>gi|323448742|gb|EGB04637.1| hypothetical protein AURANDRAFT_3079 [Aureococcus anophagefferens]
Length = 337
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 200/341 (58%), Gaps = 7/341 (2%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
HPE P RI +L AAG+ C L ++ A K L VH ++V + +K D+
Sbjct: 1 HPERPERITMSHAELGAAGLLDACATLPSRRATPKELRRVHESSYVAATFALKAK-CDAA 59
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
+ NS+YLNE S + A L+AG ++ VA G + A+VRPPGHHAE M
Sbjct: 60 LESGDDDANSVYLNEHSVDCALLSAGGTVDAVMAVASGRFDHGCALVRPPGHHAECHCMM 119
Query: 154 GFCLYNNVAVAASFLLNE--RPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH 211
GFCLYNNVAVA + L + RP ++L+VDWDVHHGN TQ MF+ DPRVLF S+HR+
Sbjct: 120 GFCLYNNVAVAVAAALEDEKRP---CRRVLVVDWDVHHGNGTQNMFFDDPRVLFCSIHRY 176
Query: 212 EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
+ GTFYP D G +G G G G+N+NV W+ G GD+DY A +D +LLP+ + + P++
Sbjct: 177 DRGTFYPPGDGGGPQQVGSGKGAGFNVNVGWDGGGAGDSDYAAAFDSLLLPLFRLYRPEL 236
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK-IVLALEGGYNLGSISNSVLA 330
I++SAGFD+A GDPLGGC +TP GY+ +L +L + + L LEGGYN S++ S A
Sbjct: 237 IVVSAGFDSARGDPLGGCDLTPRGYARLLDRLKGLRPSRGVALCLEGGYNCLSVARSYSA 296
Query: 331 CMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
C+ L P S P + + A L WP L
Sbjct: 297 CVGGLQGATPPDDSDLKKPSLRALKAVAATANHLLPHWPKL 337
>gi|326665916|ref|XP_685659.4| PREDICTED: histone deacetylase 5-like [Danio rerio]
Length = 1100
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 215/349 (61%), Gaps = 29/349 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI+++W++LQ G+ RC + ++A + +
Sbjct: 664 TGLVYDTFMLKHQCMCGNTNIHPEHAGRIQSVWSRLQETGLLGRCERIRGRKATLDEIQT 723
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 724 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSGAVR 783
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 784 MAVGCVIELAFKVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 840
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
G+ KILI+DWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG G
Sbjct: 841 GVGKILIIDWDIHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPEEVGVGPGEG 898
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
+N+N+ W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 899 FNVNIAWTGGVEPPMGDVEYLTAFRTVVMPIANEFSPDVVLVSAGFDAVEGHQSPLGGYN 958
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
VT + + K+LM A G++VLALEGG++L +I ++ +C+ LL D+
Sbjct: 959 VTAKCFGHLTKQLMKLAGGRVVLALEGGHDLTAICDASESCVEALLGDE 1007
>gi|327275871|ref|XP_003222695.1| PREDICTED: histone deacetylase 5-like [Anolis carolinensis]
Length = 1141
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 215/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 706 TGVVYDTFMLKHQCTCGNTNVHPEHAGRIQSIWSRLQETGLLSKCERVRGRKATLDEIQT 765
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E+H L ++ ++ DS++ I ++++ SS A
Sbjct: 766 VHSEHHTLLYGTSPLNRQKLDSKKLLGPLTQKMYTVLPCGGIGVDSDTVWNEMHSSSAVR 825
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FA++RPPGHHAE AMGFC +N+VA+AA L + +L
Sbjct: 826 MAVGCLVELAFKVASGELKNGFAVIRPPGHHAEESTAMGFCFFNSVAIAAKLL---QQKL 882
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KIL+VDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G+G
Sbjct: 883 AISKILVVDWDIHHGNGTQQAFYSDPNVLYISLHRYDNGNFFPGS--GAPDEVGSGMGVG 940
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+N+ W G GD +YL + +++P+A +F PD+++ISAGFDA G PLGG
Sbjct: 941 YNVNIAWTGGVDPPIGDVEYLTAFRTVVMPIANEFSPDVVLISAGFDAVEGHLSPLGGYS 1000
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + K+LM+ A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 1001 VTAKCFGHLTKQLMELAGGRVVLALEGGHDLTAICDASEACVSALL 1046
>gi|348580247|ref|XP_003475890.1| PREDICTED: histone deacetylase 7-like isoform 3 [Cavia porcellus]
Length = 859
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 235/388 (60%), Gaps = 32/388 (8%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
+T+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 420 AKTLPFITGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKA 479
Query: 66 KDKNLLSVHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNE 108
+ L SVH+E H+ L +S + D+ + + +A ++ ++I+
Sbjct: 480 SLEELQSVHSERHMLLYGTNPLSRLKLDNEKLSELLAQRMFVMLPCGGVGVDTDTIWNEL 539
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL 168
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 540 HSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQL 599
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +
Sbjct: 600 QQQG---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVEEV 654
Query: 229 GEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD- 284
G G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 655 GAGSGEGFNVNVAWAGGLEPPMGDPEYLAAFRIVVMPIAQEFSPDLVLVSAGFDAAEGHP 714
Query: 285 -PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG 343
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K
Sbjct: 715 APLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPL 774
Query: 344 SSEAY---PFESTWRVIQAVRKKLSAFW 368
S E++ P + R ++AV + S +W
Sbjct: 775 SEESWKQKPNLNAIRSLEAVIRVHSKYW 802
>gi|149037569|gb|EDL92000.1| histone deacetylase 4 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 911
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 481 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 540
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 541 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 598
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 599 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 655
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 656 LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 713
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 714 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 773
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E +P+
Sbjct: 774 NLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLH 833
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + ++ V S +W L PT SL I + E+E+ + T
Sbjct: 834 QRPNANAVHSMEKVMGIHSEYWRCLQRLSPTVGHSL-------IEAQKCENEEAETVTAM 886
Query: 407 AVLQVAL 413
A L V +
Sbjct: 887 ASLSVGV 893
>gi|7542540|gb|AAF63491.1|AF239243_1 histone deacetylase 7 [Homo sapiens]
Length = 855
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 214/355 (60%), Gaps = 26/355 (7%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 474 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 533
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 534 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFEMLPCGGVGVDTDTIWNELH 593
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 594 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 653
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 654 QQSKASKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 711
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 712 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 771
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++
Sbjct: 772 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNR 826
>gi|348580243|ref|XP_003475888.1| PREDICTED: histone deacetylase 7-like isoform 1 [Cavia porcellus]
Length = 961
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 235/388 (60%), Gaps = 32/388 (8%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
+T+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 522 AKTLPFITGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKA 581
Query: 66 KDKNLLSVHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNE 108
+ L SVH+E H+ L +S + D+ + + +A ++ ++I+
Sbjct: 582 SLEELQSVHSERHMLLYGTNPLSRLKLDNEKLSELLAQRMFVMLPCGGVGVDTDTIWNEL 641
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL 168
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 642 HSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQL 701
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +
Sbjct: 702 QQQG---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVEEV 756
Query: 229 GEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD- 284
G G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 757 GAGSGEGFNVNVAWAGGLEPPMGDPEYLAAFRIVVMPIAQEFSPDLVLVSAGFDAAEGHP 816
Query: 285 -PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG 343
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K
Sbjct: 817 APLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPL 876
Query: 344 SSEAY---PFESTWRVIQAVRKKLSAFW 368
S E++ P + R ++AV + S +W
Sbjct: 877 SEESWKQKPNLNAIRSLEAVIRVHSKYW 904
>gi|395851560|ref|XP_003798321.1| PREDICTED: histone deacetylase 4 [Otolemur garnettii]
Length = 1041
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 611 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCESIRGRKATLEELQT 670
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 671 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 728
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 729 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAR-LLQQR-- 785
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 786 LHVSKILIVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGM 843
Query: 235 GYNINVPWENGRC---GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GD +YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 844 GFNVNMAFTGGLSPPMGDTEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 903
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 904 NLSAKCFGYLTKQLMALAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 963
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 964 QRPNANAVRSMEKVVEIHSKYWRCLQRASSTVGHSL-------IEAQKCENEEAETVTAM 1016
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1017 ASLSVGV 1023
>gi|297473478|ref|XP_002686643.1| PREDICTED: histone deacetylase 4 [Bos taurus]
gi|296488755|tpg|DAA30868.1| TPA: KIAA0288 protein-like [Bos taurus]
Length = 1081
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 251/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 651 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 710
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 711 VHSETHALLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 768
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 769 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 825
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++K L+VDWDVHHGN TQ+ F+ DPRVL+ S+HR++ G F+P + G +G G G+
Sbjct: 826 LSVSKTLVVDWDVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFPGS--GAPDEVGTGAGV 883
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 884 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 943
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 944 NLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1003
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W +L T SL + + E+E+ + T
Sbjct: 1004 QRPNANAVRSMEKVIEIHSQYWRSLQRLASTAGYSL-------VEAQKCENEEAETVTAM 1056
Query: 407 AVLQVAL 413
A L VA+
Sbjct: 1057 ASLSVAV 1063
>gi|410901749|ref|XP_003964358.1| PREDICTED: histone deacetylase 5-like [Takifugu rubripes]
Length = 1142
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/422 (36%), Positives = 236/422 (55%), Gaps = 35/422 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ R+++IW++LQ G+ RC + ++A + S
Sbjct: 701 TGLVYDSLMLKHQCICGNAHIHPEHAGRVQSIWSRLQETGLLGRCERIRGRKASLDEIQS 760
Query: 73 VHTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ + D ++ I+ K+ ++ G SS A
Sbjct: 761 VHSEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 820
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A GSVIE+A RVA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A L + ++
Sbjct: 821 MAVGSVIELAFRVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKM 877
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
G+ KILIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G G
Sbjct: 878 GVGKILIVDWDIHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGS--GAPEEVGSGGGNG 935
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
+N+N+ W G GD +YL + ++++P+A+ F PD++++SAGFDA G PLGG
Sbjct: 936 FNVNIAWTGGVEPPMGDVEYLNAFRYVVMPIAQHFSPDVVLVSAGFDAVEGHQSPLGGYN 995
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + + + LM A G+IV+ALEGG++L +I ++ +C++ LL D +
Sbjct: 996 VSAKCFGQLTQLLMGLAGGRIVMALEGGHDLTAICDASESCVSALLGDLVRRLECQRVIH 1055
Query: 349 --PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P W ++ V + WP L T SL P + SEDE V +
Sbjct: 1056 EKPCPKAWASLERVIEIQGKHWPCLQSLSHTSTHSLSDAPK--AAQGQSEDEAETVSAMA 1113
Query: 407 AV 408
++
Sbjct: 1114 SL 1115
>gi|392341674|ref|XP_003754394.1| PREDICTED: histone deacetylase 7 isoform 4 [Rattus norvegicus]
gi|392349719|ref|XP_003750453.1| PREDICTED: histone deacetylase 7 isoform 3 [Rattus norvegicus]
Length = 851
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/438 (37%), Positives = 248/438 (56%), Gaps = 42/438 (9%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 420 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 479
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 480 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 539
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 540 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 596
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DPRVL+ S+HRH+ G F+P + G +G G G G
Sbjct: 597 KASKILIVDWDVHHGNGTQQTFYQDPRVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 654
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 655 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 714
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 715 VSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSQESWKQ 774
Query: 349 -PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEA 407
P + R ++AV + +W + +L S P + +D+E VE + A
Sbjct: 775 KPNLNAIRSLEAVVRVHRKYWGCM-----QRLASCPDPWLPRVPGADAE-----VEAVTA 824
Query: 408 VLQVALSKLKVDDGHAEL 425
+ +++ L D EL
Sbjct: 825 LASLSVGILAEDRPSKEL 842
>gi|74199219|dbj|BAE33147.1| unnamed protein product [Mus musculus]
Length = 1076
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 217/340 (63%), Gaps = 23/340 (6%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 651 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 710
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSV 121
VH+E H L ++ ++ DS + +L ++I+ SS AA LA G V
Sbjct: 711 VHSEAHTLLYGTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCV 770
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R L ++KIL
Sbjct: 771 VELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR--LNVSKIL 827
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+
Sbjct: 828 IVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMA 885
Query: 242 WENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGY 296
+ G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG ++ +
Sbjct: 886 FTGGLEPPMGDAEYLAAFKTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCF 945
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
+ K+LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 946 GYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALL 985
>gi|363750828|ref|XP_003645631.1| hypothetical protein Ecym_3324 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889265|gb|AET38814.1| Hypothetical protein Ecym_3324 [Eremothecium cymbalariae
DBVPG#7215]
Length = 706
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 203/345 (58%), Gaps = 20/345 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ GL YD RM H Y HPE+P RI I+ L G I
Sbjct: 55 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLIEDPTLSGVDDIGN 114
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ + +EA + +L VH++ HV +K ++ + + +S+Y N S +A
Sbjct: 115 LMLKIPIREATEDEILLVHSKEHVEFLKTTNTMSREQLLKETEAG-DSVYYNNDSLVSAK 173
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G IE + V EG + +A A+VRPPGHHAEP+ A GFCL++NVAVAA +L PE
Sbjct: 174 LSCGGAIEACKAVVEGRVKNALAVVRPPGHHAEPEVAGGFCLFSNVAVAARNILKNYPE- 232
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K++I+DWD+HHGN TQ+ F+ D RVL+ S+HR+E G +YP + G Y GEG G G
Sbjct: 233 SVRKVMILDWDIHHGNGTQRAFYNDNRVLYVSLHRYELGRYYPGTEYGNYNQSGEGKGEG 292
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N N+PW G GDA+Y+ ++ I++P+ ++F PD++IIS+GFDAA GD +G C V+P
Sbjct: 293 FNCNIPWSCGGVGDAEYMWAFEQIVIPMGREFQPDLVIISSGFDAADGDTIGQCHVSPAC 352
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL SI+ S L + VL+ + P
Sbjct: 353 YGHMTHMLKSLAKGNMCVVLEGGYNLDSIAKSALGVVKVLIGEPP 397
>gi|157909803|ref|NP_001026152.2| histone deacetylase 9 [Gallus gallus]
Length = 1069
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+Y HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 634 TGVVYDSLMLKHQCMCGNYANHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQL 693
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E+H L ++ ++ D R+ ++ KL S+ G S+ AA
Sbjct: 694 VHSEHHSLLYGTSPLNRQKLDPRKLLGNVSQKLFSLLPCGGLGVDSDTVWNELHSAGAAR 753
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A RVA EL + FA+VRPPGHHAE AMGFC +N++A+ A +L R +L
Sbjct: 754 MAVGCVIELAARVASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYL---RDKL 810
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G GPG G
Sbjct: 811 NIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGS--GAPNEVGSGPGEG 868
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+NIN+ W G GD +YL + +++P A +F P+I+++SAGFDA G PLGG +
Sbjct: 869 FNINIAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYK 928
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + K+L+ A G++VLALEGG++L +I ++ AC+N LL
Sbjct: 929 VTAKCFGHLTKQLLKLADGRVVLALEGGHDLTAICDASEACINALL 974
>gi|403291465|ref|XP_003936809.1| PREDICTED: histone deacetylase 4 [Saimiri boliviensis boliviensis]
Length = 1083
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 249/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 653 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 712
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 713 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 770
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 771 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 827
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 828 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGV 885
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 886 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 945
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 946 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1005
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+++ + T
Sbjct: 1006 QRPNANAVRSMEKVMEIHSKYWRCLQRAASTAGRSL-------IEAQTCENDEAETVTAM 1058
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1059 ASLSVGV 1065
>gi|440896746|gb|ELR48593.1| Histone deacetylase 4, partial [Bos grunniens mutus]
Length = 1066
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 251/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 648 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 707
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 708 VHSETHALLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 765
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 766 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 822
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++K L+VDWDVHHGN TQ+ F+ DPRVL+ S+HR++ G F+P + G +G G G+
Sbjct: 823 LSVSKTLVVDWDVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFPGS--GAPDEVGTGAGV 880
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 881 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 940
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 941 NLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1000
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W +L T SL + + E+E+ + T
Sbjct: 1001 QRPNANAVRSMEKVIEIHSQYWRSLQRLASTAGYSL-------VEAQKCENEEAETVTAM 1053
Query: 407 AVLQVAL 413
A L VA+
Sbjct: 1054 ASLSVAV 1060
>gi|410964215|ref|XP_003988651.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 7 [Felis catus]
Length = 1116
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 226/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 678 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 737
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 738 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 797
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 798 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 857
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ KILI+DWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 858 QQG---KAGKILIMDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 912
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 913 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRMVVMPIAREFSPDLVLVSAGFDAAEGHPA 972
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 973 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 1032
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 1033 EEGWKQKPNLNAIRSLEAVIQVHSKYW 1059
>gi|402223983|gb|EJU04046.1| histone deacetylase complex protein [Dacryopinax sp. DJM-731 SS1]
Length = 697
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 201/339 (59%), Gaps = 17/339 (5%)
Query: 14 RVGLLYDERMCKHNTPDG------DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKD 67
R G +YD RM HN DG D HPE P RI I+N L+ GI QR L +EA
Sbjct: 33 RTGYIYDTRMMAHN--DGMTEEQEDRHPEGPRRISVIFNALEKKGIIQRMRRLQIREATR 90
Query: 68 KNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN------SIYLNEGSSEAAYLAAGSV 121
+L VH + + + + + +D + S+Y++ ++ A L+ G V
Sbjct: 91 DEILFVHPPSLLAKMDQMEAMLIGEGKDAALAGTQGYYETLSLYVHPSTAYCARLSCGGV 150
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
IE VA+G + ++FAIVRPPGHHAEP+E MGFC YNNVAVA + I K+L
Sbjct: 151 IESTMAVAQGTVRNSFAIVRPPGHHAEPEEHMGFCFYNNVAVAVR---VVQSRTSIRKVL 207
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
I+DWDVHHGN TQ F+ DP VL+ S+HR+E G FYP G G G G G N+N+P
Sbjct: 208 ILDWDVHHGNGTQAAFYDDPDVLYISIHRYEGGNFYPGGTGGGVDKCGSGAGKGRNVNIP 267
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLK 301
W +G D DY+ + I++P+A +FGP+++IISAGFDAA GD LGGC V+P Y+ M
Sbjct: 268 WPSGGRTDGDYIHAFQKIVIPIAYEFGPELVIISAGFDAAEGDQLGGCFVSPACYAHMTH 327
Query: 302 KLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
L A GK+V+ALEGGY+L ++S S LA L+ D P
Sbjct: 328 MLSALAGGKLVVALEGGYSLKALSQSALAVGETLVGDHP 366
>gi|46402201|ref|NP_997108.1| histone deacetylase 4 [Mus musculus]
gi|81885062|sp|Q6NZM9.1|HDAC4_MOUSE RecName: Full=Histone deacetylase 4; Short=HD4
gi|41946996|gb|AAH66052.1| Histone deacetylase 4 [Mus musculus]
Length = 1076
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 217/340 (63%), Gaps = 23/340 (6%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 651 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 710
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSV 121
VH+E H L ++ ++ DS + +L ++I+ SS AA LA G V
Sbjct: 711 VHSEAHTLLYGTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCV 770
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R L ++KIL
Sbjct: 771 VELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR--LNVSKIL 827
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+N+
Sbjct: 828 IVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMA 885
Query: 242 WENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGY 296
+ G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG ++ +
Sbjct: 886 FTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCF 945
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
+ K+LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 946 GYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALL 985
>gi|410969776|ref|XP_003991368.1| PREDICTED: histone deacetylase 4 [Felis catus]
Length = 1075
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/427 (37%), Positives = 250/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 645 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 704
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 705 VHSEAHALLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 762
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 763 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 819
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++K LIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 820 LDVSKTLIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGPGV 877
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 878 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 937
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 938 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 997
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W +L T SL + + E+E+ + T
Sbjct: 998 QRPNANAVRSMEKVIEIHSQYWRSLPRLCSTVGHSL-------VEAQKCENEEAETVTAM 1050
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1051 ASLSVGV 1057
>gi|341902032|gb|EGT57967.1| hypothetical protein CAEBREN_13830 [Caenorhabditis brenneri]
Length = 810
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 214/379 (56%), Gaps = 25/379 (6%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL YD M +H G+ H EN RI++IW+KL G QRC + K+A + L
Sbjct: 406 TGLGYDPAMARHECLCGNNASHIENGCRIQSIWSKLIEKGHVQRCERVTPKKASLEQLQL 465
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIA-SKLNSI-----------YLNEGSSE-AAYLAAG 119
VH++ + + F + + K ++ Y N+ +++ AA LAAG
Sbjct: 466 VHSQTYTAFFAVSPTACFKIDTNSLPLRKFTTLPCGGMGVDTDTYFNDATTQTAARLAAG 525
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
++IE++ +V EG L + FA +RPPGHH+E ++AMGFC +NNVAV A L + P + K
Sbjct: 526 TLIELSSQVVEGRLKNGFACIRPPGHHSEREQAMGFCFFNNVAVTAKTLQIKYP-IQCAK 584
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
I IVDWDVHHGN TQ F DP VL+ S+HRH+ GTF+P G T IG G G+N+N
Sbjct: 585 IAIVDWDVHHGNGTQICFENDPNVLYLSLHRHDNGTFFPGT--GSVTEIGNGVAKGFNVN 642
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYS 297
+P+ G D +YLA W ++ P+ F PDII++SAGFDA G P LGG V+P +
Sbjct: 643 IPFSGGVMKDPEYLAAWRTVVEPILASFCPDIILVSAGFDACQGHPNALGGYEVSPEMFG 702
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG-----SSEAYPFES 352
M K L +A GK+VLALEGGY+L S+++S C+ L+ + AG S E P +
Sbjct: 703 YMTKSLCSYANGKVVLALEGGYDLTSLADSAEQCVQALIGESDDAGRLSTESLETLPNQG 762
Query: 353 TWRVIQAVRKKLSAFWPTL 371
+Q V FWP L
Sbjct: 763 AHETLQKVIAIHKGFWPAL 781
>gi|392341654|ref|XP_003754392.1| PREDICTED: histone deacetylase 7 isoform 2 [Rattus norvegicus]
gi|392349713|ref|XP_003750451.1| PREDICTED: histone deacetylase 7 isoform 1 [Rattus norvegicus]
gi|149032186|gb|EDL87098.1| histone deacetylase 7A [Rattus norvegicus]
Length = 916
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/438 (37%), Positives = 248/438 (56%), Gaps = 42/438 (9%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 485 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 544
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 545 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 604
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 605 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 661
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DPRVL+ S+HRH+ G F+P + G +G G G G
Sbjct: 662 KASKILIVDWDVHHGNGTQQTFYQDPRVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 719
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 720 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 779
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 780 VSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSQESWKQ 839
Query: 349 -PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEA 407
P + R ++AV + +W + +L S P + +D+E VE + A
Sbjct: 840 KPNLNAIRSLEAVVRVHRKYWGCM-----QRLASCPDPWLPRVPGADAE-----VEAVTA 889
Query: 408 VLQVALSKLKVDDGHAEL 425
+ +++ L D EL
Sbjct: 890 LASLSVGILAEDRPSKEL 907
>gi|392569749|gb|EIW62922.1| histone deacetylase complex protein [Trametes versicolor FP-101664
SS1]
Length = 679
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 215/368 (58%), Gaps = 15/368 (4%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
R VG +Y +M H+ G H E P RI I++ L ++ L + +
Sbjct: 49 RANAYHVGYVYSSKMMSHSCVHG--HCEQPERISRIFDILNQNDCLKKMKRLPIRRVLRE 106
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAER 127
L VH++ + + + S D A + S+Y++ + AA L+AG VIE
Sbjct: 107 EALLVHSQALWDKVLALHSLTDQDIADSEAYYNDLSLYVHPTTPYAAQLSAGGVIEATLA 166
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
VA GE+ AFAIVRPPGHHAEPDE MGFC +NNV++AA + + + + +ILI+DWDV
Sbjct: 167 VARGEVKKAFAIVRPPGHHAEPDEHMGFCFFNNVSIAAKVV---QLKSTLKRILILDWDV 223
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ+ F+ DP VL+ S+HR+E G FYP G T GEG GLGY++N+PW
Sbjct: 224 HHGNGTQRAFYDDPSVLYISLHRYEGGNFYPNGPFGSMTSCGEGAGLGYSVNIPWPEKGM 283
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GDADY+ + I++P+A +F PD++IISAGFDAA GD LG C V+P GY+ M L A
Sbjct: 284 GDADYILAFQKIVMPIALEFSPDLVIISAGFDAAEGDDLGECHVSPAGYAHMTHMLSSLA 343
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVA----GSSEAYPFESTWRVIQAVRKK 363
GK+V+ALEGGY L +I+ S LA V+L + P +SEA E+ W+ V +
Sbjct: 344 GGKLVVALEGGYCLDAIAASALAVTRVVLGEMPPQLPPLTASEA-ATETIWQ----VSAE 398
Query: 364 LSAFWPTL 371
S +W L
Sbjct: 399 QSKYWKNL 406
>gi|392341670|ref|XP_003754393.1| PREDICTED: histone deacetylase 7 isoform 3 [Rattus norvegicus]
gi|392349717|ref|XP_003750452.1| PREDICTED: histone deacetylase 7 isoform 2 [Rattus norvegicus]
Length = 892
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/438 (37%), Positives = 248/438 (56%), Gaps = 42/438 (9%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 461 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 520
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 521 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 580
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 581 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 637
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DPRVL+ S+HRH+ G F+P + G +G G G G
Sbjct: 638 KASKILIVDWDVHHGNGTQQTFYQDPRVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 695
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 696 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 755
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 756 VSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSQESWKQ 815
Query: 349 -PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEA 407
P + R ++AV + +W + +L S P + +D+E VE + A
Sbjct: 816 KPNLNAIRSLEAVVRVHRKYWGCM-----QRLASCPDPWLPRVPGADAE-----VEAVTA 865
Query: 408 VLQVALSKLKVDDGHAEL 425
+ +++ L D EL
Sbjct: 866 LASLSVGILAEDRPSKEL 883
>gi|7022290|dbj|BAA91545.1| unnamed protein product [Homo sapiens]
Length = 614
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/387 (39%), Positives = 227/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 176 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLLSQCECLRGRKAS 235
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 236 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 295
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 296 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 355
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 356 QQSK---ASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 410
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 411 ASSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 470
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S
Sbjct: 471 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLS 530
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 531 EEGWKQKPNLNAIRSLEAVIRVHSKYW 557
>gi|119890566|ref|XP_595731.3| PREDICTED: histone deacetylase 4, partial [Bos taurus]
Length = 955
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 251/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 450 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 509
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 510 VHSETHALLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 567
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 568 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 624
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++K L+VDWDVHHGN TQ+ F+ DPRVL+ S+HR++ G F+P + G +G G G+
Sbjct: 625 LSVSKTLVVDWDVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFPGS--GAPDEVGTGAGV 682
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 683 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 742
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 743 NLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 802
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W +L T SL + + E+E+ + T
Sbjct: 803 QRPNANAVRSMEKVIEIHSQYWRSLQRLASTAGYSL-------VEAQKCENEEAETVTAM 855
Query: 407 AVLQVAL 413
A L VA+
Sbjct: 856 ASLSVAV 862
>gi|355786038|gb|EHH66221.1| hypothetical protein EGM_03164, partial [Macaca fascicularis]
Length = 446
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 224/379 (59%), Gaps = 32/379 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 67 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 126
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 127 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 186
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 187 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 246
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 247 QQSKA---SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 301
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 302 AGSGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPA 361
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 362 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 421
Query: 345 SEAY---PFESTWRVIQAV 360
E + P + R ++AV
Sbjct: 422 EEGWKQKPNLNAIRSLEAV 440
>gi|427788523|gb|JAA59713.1| Putative histone deacetylase complex catalytic component hda1
[Rhipicephalus pulchellus]
Length = 1088
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 151/393 (38%), Positives = 228/393 (58%), Gaps = 30/393 (7%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L YD M KH GDY HPE+ R+++IW +LQ G+ RC + +++A + + S
Sbjct: 654 TALAYDSLMLKHQCICGDYSSHPEHGGRLQSIWARLQETGLVARCERIRSRKASLEEIQS 713
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL--------------NE-GSSEAAYLA 117
H E + + + ++ + S + NE ++ AA +A
Sbjct: 714 CHDEGYAFMFGTNPLNRQKLEISKLELPIKSFVMLPCGGIGVDSDTTWNELHTASAARMA 773
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
AG V+++A +VA GE + FA+VRPPGHHAE +AMGFC +N+VA+AA L R +L +
Sbjct: 774 AGCVVDLALKVAMGEAKNGFAVVRPPGHHAEFKQAMGFCFFNSVAIAAKQL---RQKLKM 830
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
KIL+VDWDVHHGN Q++F+ DP VL+ S+HRH+ G F+P D +G G G+N
Sbjct: 831 EKILVVDWDVHHGNGLQQIFYDDPHVLYISLHRHDDGNFFPGTGDP--QEVGIDDGTGFN 888
Query: 238 INVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVT 292
IN+ W N GDA+Y+A + I++P+A+DF P+I++++AGFDAAAG PLGG +++
Sbjct: 889 INIAWSGALNPPMGDAEYIAAFRTIVMPIARDFDPEIVLVAAGFDAAAGHPPPLGGYQIS 948
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEA---YP 349
P ++ M K+LM A+G++VLALEGGY+L SI + C+ LL D+ E P
Sbjct: 949 PACFAYMTKQLMTLAKGRVVLALEGGYDLPSICDCSQECVAALLGDECTPLREEEVTRQP 1008
Query: 350 FESTWRVIQAVRKKLSAFWPTLADELPTKLTSL 382
+ +++Q + WP + PT +SL
Sbjct: 1009 CAAAVQLLQKTAAIQAPHWPCVKKWAPTMGSSL 1041
>gi|317144802|ref|XP_001820384.2| histone deacetylase hda1 [Aspergillus oryzae RIB40]
gi|391874670|gb|EIT83515.1| histone deacetylase complex, catalytic component HDA1 [Aspergillus
oryzae 3.042]
Length = 792
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 217/378 (57%), Gaps = 20/378 (5%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----PQRCVV------LNA 62
GL YD +M H P D HPE+P RI I+ +L AG+ R +V ++
Sbjct: 130 GLCYDVQMRYHCEVRPTADVHPEDPRRIYYIYKELCRAGLVDDPESSRPLVSRPMKRISV 189
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A ++ + VHT +H +++ + D + +SIY N+ + ++ L+ G I
Sbjct: 190 RNATEEEISLVHTPDHFAFVES-TKDMTDDELIALEHTRDSIYFNKLTFASSLLSVGGAI 248
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG--INKI 180
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV+VAA + +LG KI
Sbjct: 249 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVC---QKQLGDKCRKI 305
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
LI+DWDVHHGN QK F+ DP VL+ S+H ++ G FYP D+G + G G G G N+N+
Sbjct: 306 LILDWDVHHGNGIQKAFYDDPNVLYISLHVYQDGKFYPGGDEGDWDHCGTGAGYGRNVNI 365
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
PW + GD DY+ + +++P+A++F PD++I+++GFDAA GD LGGC VTP Y+ M
Sbjct: 366 PWPSQGMGDGDYMYAFQQVVMPIAQEFDPDLVIVASGFDAAVGDELGGCFVTPTCYAHMT 425
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAV 360
LM A GK+ + LEGGYN SIS S LA L+ D P S +P + ++ V
Sbjct: 426 HMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGDPPDRLHS-TFPSKLATTTVRRV 484
Query: 361 RKKLSAFWPTLADELPTK 378
S FW + + P +
Sbjct: 485 MMIQSQFWSCMYPKAPQE 502
>gi|303319433|ref|XP_003069716.1| histone deacetylase clr3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109402|gb|EER27571.1| histone deacetylase clr3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040837|gb|EFW22770.1| histone deacetylase 6 [Coccidioides posadasii str. Silveira]
Length = 760
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/378 (40%), Positives = 218/378 (57%), Gaps = 24/378 (6%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-----------IPQRCVVLNA 62
G+ YD RM H P D HPE+P RI I+ +L AG + Q + + A
Sbjct: 120 GVCYDIRMRYHCEVKPTLDVHPEDPRRIYYIYKELCKAGLVDDPDASRPLVSQPLLRIPA 179
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAGS 120
++A + + +H H + + +S+K S + IA S +SIY N + +A LA G
Sbjct: 180 RDATHEEISLIHDSEHYDFV--LSTKDM-SEDELIALESTRDSIYFNTLTFTSAILACGG 236
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
IE + V G++ +A A++RPPGHHAE +AMGFCL+NNV+VAA + + + KI
Sbjct: 237 AIETCKAVVSGKVKNAIAVIRPPGHHAEQCQAMGFCLFNNVSVAAR-VCQKTFKDKCRKI 295
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
+IVDWDVHHGN Q F+ DP VL+ S+H ++ G FYP + G + GEG GLG N+N+
Sbjct: 296 MIVDWDVHHGNGVQNAFYDDPNVLYISLHVYKDGAFYPGGEQGNWDHCGEGNGLGKNVNI 355
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
PW GD DYL + +++P+ +F PD++IISAGFDAAAGD LGGC VTP Y+ M
Sbjct: 356 PWPTQGMGDGDYLYAFQEVIMPIGYEFNPDLVIISAGFDAAAGDELGGCFVTPPCYAHMT 415
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP--VAGSSEAYPFESTWRVIQ 358
LM+ A GK+ + LEGGYN SIS S LA L+ + P + G + ST R +
Sbjct: 416 SMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEPPDRLIGVGASQAGVSTVRKVT 475
Query: 359 AVRKKLSAFWPTLADELP 376
++ K +W + + P
Sbjct: 476 MIQSK---YWQCMYPKGP 490
>gi|348517955|ref|XP_003446498.1| PREDICTED: histone deacetylase 5-like [Oreochromis niloticus]
Length = 1131
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 213/348 (61%), Gaps = 29/348 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ R+++IW++LQ G+ RC + ++A + S
Sbjct: 694 TGLVYDSLMLKHQCVCGNAHIHPEHAGRVQSIWSRLQETGLLGRCERIRGRKASLDEIQS 753
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ + D ++ I+ K+ ++ G SS A
Sbjct: 754 VHSEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVR 813
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A GSVIE+A RVA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 814 MAVGSVIELAFRVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 870
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
G+ KILIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G+G
Sbjct: 871 GVGKILIVDWDIHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGS--GAPEEVGSGAGVG 928
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
+N+N+ W G GD +YL + +++P+A+ F PD++++SAGFDA G PLGG
Sbjct: 929 FNVNIAWTGGVDPPMGDVEYLTAFRTVVMPIAQQFSPDVVLVSAGFDAVEGHQSPLGGYN 988
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
V+ + + + LM A G++V+ALEGG++L +I ++ AC++ LL D
Sbjct: 989 VSAKCFGQLTQLLMGLAGGRVVMALEGGHDLTAICDASEACVSALLGD 1036
>gi|392341661|ref|XP_001059057.3| PREDICTED: histone deacetylase 7 isoform 1 [Rattus norvegicus]
gi|392349715|ref|XP_345869.4| PREDICTED: histone deacetylase 7 isoform 5 [Rattus norvegicus]
Length = 953
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/438 (37%), Positives = 248/438 (56%), Gaps = 42/438 (9%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 522 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 581
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 582 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 641
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 642 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 698
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DPRVL+ S+HRH+ G F+P + G +G G G G
Sbjct: 699 KASKILIVDWDVHHGNGTQQTFYQDPRVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 756
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 757 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 816
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 817 VSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSQESWKQ 876
Query: 349 -PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEA 407
P + R ++AV + +W + +L S P + +D+E VE + A
Sbjct: 877 KPNLNAIRSLEAVVRVHRKYWGCM-----QRLASCPDPWLPRVPGADAE-----VEAVTA 926
Query: 408 VLQVALSKLKVDDGHAEL 425
+ +++ L D EL
Sbjct: 927 LASLSVGILAEDRPSKEL 944
>gi|193885226|pdb|2VQQ|A Chain A, Structure Of Hdac4 Catalytic Domain (A Double Cysteine-To-
Alanine Mutant) Bound To A Trifluoromethylketone
Inhbitor
gi|193885227|pdb|2VQQ|B Chain B, Structure Of Hdac4 Catalytic Domain (A Double Cysteine-To-
Alanine Mutant) Bound To A Trifluoromethylketone
Inhbitor
Length = 413
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 160/418 (38%), Positives = 245/418 (58%), Gaps = 42/418 (10%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 10 TGLVYDTLMLKHQCTAGSSSSHPEHAGRIQSIWSRLQETGLRGKCEAIRGRKATLEELQT 69
Query: 73 VHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 70 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 127
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 128 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 184
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 185 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 242
Query: 235 GYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 243 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 302
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 303 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 362
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVET 404
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 363 QRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSL-------IEAQTCENEEAETVT 413
>gi|432114530|gb|ELK36378.1| Histone deacetylase 7 [Myotis davidii]
Length = 1033
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 158/387 (40%), Positives = 232/387 (59%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 596 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRGQCECLRGRKAS 655
Query: 67 DKNLLSVHTENHVNL--IKNISSKQFDSRR------DRIASKL---------NSIYLNEG 109
+ L SVH+E HV+L +S + D+ + RI L ++I+
Sbjct: 656 LEELQSVHSERHVHLYGTNPLSRLKLDNGKLAGLLAQRIFVMLPCGGVGVDTDTIWNELH 715
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 716 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADRSTAMGFCFFNSVAIACRQLQ 775
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ ++ILIVDWDVHHGN TQ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 776 QQG---KASRILIVDWDVHHGNGTQHTFYEDPSVLYISLHRHDDGNFFPGS--GAVEEVG 830
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 831 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 890
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK--PVA 342
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K P+A
Sbjct: 891 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLA 950
Query: 343 GSS-EAYPFESTWRVIQAVRKKLSAFW 368
+ P + R ++AV + S +W
Sbjct: 951 EKGWKQKPNLNAIRSLEAVIRVHSKYW 977
>gi|196005575|ref|XP_002112654.1| hypothetical protein TRIADDRAFT_56890 [Trichoplax adhaerens]
gi|190584695|gb|EDV24764.1| hypothetical protein TRIADDRAFT_56890 [Trichoplax adhaerens]
Length = 432
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 222/402 (55%), Gaps = 39/402 (9%)
Query: 18 LYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTEN 77
+YD+ M KH HPE P+RI I++K Q + ++C L ++ A D+ LL +H++N
Sbjct: 33 VYDKDMKKHQNLYDRSHPEVPDRISRIYDKCQEYELLKKCKRLPSRVATDEELLIMHSQN 92
Query: 78 HVNLIKNISSKQFDSRRD--RIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
LI + + Q RD + A L+SIYL+ S E A LAAG + V E VA G+ +
Sbjct: 93 ---LIDTLRATQTMKSRDLSKYADSLDSIYLHPSSFECAKLAAGCTLAVIEEVASGKSLN 149
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
IVRPPGHH D GFCL+NNVA+AA + + I++ILIVDWDVHHGN TQ
Sbjct: 150 GIGIVRPPGHHGFHDICSGFCLFNNVAIAAKKV---QSYPNIDRILIVDWDVHHGNGTQS 206
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
+F+KDP VL++S+HR++ FYP +D Y GE G G+NINV W
Sbjct: 207 LFYKDPSVLYYSIHRYDHAEFYPFMEDANYDRAGEEAGEGFNINVAWNK----------- 255
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLAL 315
F PD++I+SAGFD+A GDP G C VTP G++ + K LM+ A G++ L L
Sbjct: 256 -----------FNPDLVIVSAGFDSARGDPKGLCNVTPEGFAHLTKLLMNLANGRLALIL 304
Query: 316 EGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA--- 372
EGGYNL S + S+ AC+ VLL + A P +S I K S +W +L
Sbjct: 305 EGGYNLTSNAESMAACLRVLLGESCPPLEEAAIPCQSALESISNTLKTHSKYWKSLRLPA 364
Query: 373 ----DELPTKLTSLKAPPAHM--ISSSDSEDEDTKVETLEAV 408
D + + K PA +SSD++ +++ E ++ V
Sbjct: 365 FTTDDTQKRESETEKMKPAEKRPTTSSDTQKRESETEKMKPV 406
>gi|148708071|gb|EDL40018.1| histone deacetylase 4, isoform CRA_b [Mus musculus]
Length = 1054
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 220/347 (63%), Gaps = 32/347 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 624 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 683
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 684 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 741
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 742 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 798
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 799 LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 856
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 857 GFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 916
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 917 NLSAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALL 963
>gi|403416897|emb|CCM03597.1| predicted protein [Fibroporia radiculosa]
Length = 685
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 213/363 (58%), Gaps = 22/363 (6%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VG +Y +M H G +H E P RIK I++ L+ R L + + L VH
Sbjct: 56 VGYVYSSKMMMHRRSHG-HHEEQPERIKRIFDILKEEKCLARMRRLPIRPVLREEALLVH 114
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLN----SIYLNEGSSEAAYLAAGSVIEVAERVAE 130
+E L + S + +D + S S+Y+++ + A ++AG VIE A VA
Sbjct: 115 SEA---LWDKVLSVHCMTEQDIVDSASYYEELSLYVHQSTPYCAQISAGGVIEAALAVAR 171
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
GE+ +FAIVRPPGHHAEPDE MGFC +NNV++A + + + +++I+DWDVHHG
Sbjct: 172 GEVKKSFAIVRPPGHHAEPDEHMGFCFFNNVSIATKVV---QLRTALKRVMILDWDVHHG 228
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ+ F+ DP VL+ S+HR+E G +YP G G G GLGY++N+PW GDA
Sbjct: 229 NGTQRAFYDDPSVLYVSLHRYEGGFYYPNGPFGSMVSCGTGAGLGYSVNIPWPEKGMGDA 288
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY+ + +++P+A +F P+++IISAGFDAA GD LG C V+P GY+ M L A GK
Sbjct: 289 DYILAFQKVVMPIALEFAPELVIISAGFDAAEGDTLGECHVSPAGYAHMTHMLSSLASGK 348
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLED-----KPVAGSSEAYPFESTWRVIQAVRKKLS 365
+V+ALEGGYNL +IS S LA V+L + +P+ S A E+ W V ++ S
Sbjct: 349 LVVALEGGYNLDAISVSALAVARVILGEVPPQLEPMVASEVAT--ETIWH----VAREQS 402
Query: 366 AFW 368
+W
Sbjct: 403 KYW 405
>gi|403301654|ref|XP_003941501.1| PREDICTED: histone deacetylase 7 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 915
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 154/387 (39%), Positives = 227/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 477 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 536
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 537 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 596
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 597 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 656
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 657 QQN---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDNGNFFPGS--GAVDEVG 711
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F P+++++SAGFDAA G
Sbjct: 712 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPNLVLVSAGFDAAEGHPA 771
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 772 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 831
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
+ + P + R ++AV + S +W
Sbjct: 832 EDGWKQKPNLNAIRSLEAVIRVHSKYW 858
>gi|400598889|gb|EJP66596.1| histone deacetylase [Beauveria bassiana ARSEF 2860]
Length = 738
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 219/393 (55%), Gaps = 45/393 (11%)
Query: 15 VGLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----PQ----RCV----- 58
G YD+RM H D +HPE+P RI I+ + G+ PQ R +
Sbjct: 67 TGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKQMGLVYTGPQSELPRIIKESPT 126
Query: 59 ----VLNAKEAKDKNLLSVHTENHVNLIKNIS----------SKQFDSRRDRIASKLNSI 104
+ A+ A+ + H+ H++ +++I ++QFD R+ S+
Sbjct: 127 KYMWRIPARPARRDEICLAHSAEHLSWVESIDKLSSAELRALTRQFDQGRE-------SL 179
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y+ S AA L+AG I+ + + EG++ +AFA++RPPGHHAE D+AMGFC +NNV VA
Sbjct: 180 YVGSMSYPAALLSAGGAIDTCKNIIEGQVKNAFAVIRPPGHHAEYDQAMGFCFFNNVPVA 239
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND--- 221
+ P++ K+LI+DWDVHHGN Q +F+ DP VL+ S+H ++ G FYP
Sbjct: 240 VRVCQQDYPDI-CRKVLILDWDVHHGNGVQNIFYDDPNVLYISIHVYQNGAFYPGKSPDP 298
Query: 222 ---DGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
DG G GPGLG NIN+ W + GD +Y+A ++ I++P+AK+F PD+++ISAGF
Sbjct: 299 NVPDGGIENCGVGPGLGKNINIGWHDQGMGDGEYMAAFEKIVMPIAKEFDPDLVVISAGF 358
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
DAA GD LGGC VTP Y+ M LM A GK+ + LEGGYNL +ISNS +A L+ +
Sbjct: 359 DAADGDELGGCFVTPSCYAHMTHMLMSLADGKVAVCLEGGYNLQAISNSAVAVARTLMSE 418
Query: 339 KPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
P E+ R + V+ + +W +
Sbjct: 419 PPPRMKVPMINREAA-RTLAKVQAHQAPYWECM 450
>gi|403301656|ref|XP_003941502.1| PREDICTED: histone deacetylase 7 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 952
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 154/387 (39%), Positives = 227/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 514 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 573
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 574 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 633
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 634 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 693
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 694 QQN---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDNGNFFPGS--GAVDEVG 748
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F P+++++SAGFDAA G
Sbjct: 749 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPNLVLVSAGFDAAEGHPA 808
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 809 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 868
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
+ + P + R ++AV + S +W
Sbjct: 869 EDGWKQKPNLNAIRSLEAVIRVHSKYW 895
>gi|148708070|gb|EDL40017.1| histone deacetylase 4, isoform CRA_a [Mus musculus]
Length = 965
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 220/347 (63%), Gaps = 32/347 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 535 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 594
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 595 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 652
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 653 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 709
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 710 LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 767
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 768 GFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 827
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 828 NLSAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALL 874
>gi|395540465|ref|XP_003772175.1| PREDICTED: histone deacetylase 9 [Sarcophilus harrisii]
Length = 1076
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 217/349 (62%), Gaps = 29/349 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L
Sbjct: 644 TGVVYDALMLKHQCICGRSALHPEHAGRIQSIWSRLQETGLLSKCERIQGRKASLEELHL 703
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+++H L +S ++ D+R + S L ++I+ S+ AA
Sbjct: 704 VHSDHHSLLYGTDPLSRQKLDARLLQGPTSQKAFSLLPCGGLGVDSDTIWNELHSAAAAR 763
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +V GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 764 MAVGCVIELASKVVSGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---REQL 820
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 821 NVGKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGSGLGEG 878
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YN+N+ W G GD +YLA + +++P+A++FGPDI+++SAGFDA G PLGG +
Sbjct: 879 YNVNIAWTGGLDPPMGDVEYLAAFRTVVMPIAREFGPDIVLVSAGFDAVEGHAPPLGGYK 938
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
VT + + ++LM A G +V+ALEGG++L +I ++ AC+N LLE++
Sbjct: 939 VTAKCFGNLTRQLMQVADGHVVMALEGGHDLTAICDASEACVNALLENE 987
>gi|281346748|gb|EFB22332.1| hypothetical protein PANDA_009073 [Ailuropoda melanoleuca]
Length = 969
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 227/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 531 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 590
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 591 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 650
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 651 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 710
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILI+DWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 711 QQG---KASKILIMDWDVHHGNGTQQTFYQDPGVLYISLHRHDDGNFFPGS--GAADEVG 765
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 766 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPA 825
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 826 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 885
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 886 EEGWKQKPNLNAIRSLEAVIRVHSKYW 912
>gi|301769869|ref|XP_002920360.1| PREDICTED: histone deacetylase 7-like [Ailuropoda melanoleuca]
Length = 998
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 227/387 (58%), Gaps = 32/387 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 560 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 619
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 620 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 679
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 680 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 739
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILI+DWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 740 QQG---KASKILIMDWDVHHGNGTQQTFYQDPGVLYISLHRHDDGNFFPGS--GAADEVG 794
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 795 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPA 854
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 855 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 914
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E + P + R ++AV + S +W
Sbjct: 915 EEGWKQKPNLNAIRSLEAVIRVHSKYW 941
>gi|193885222|pdb|2VQJ|A Chain A, Structure Of Hdac4 Catalytic Domain Bound To A
Trifluoromethylketone Inhbitor
gi|193885223|pdb|2VQM|A Chain A, Structure Of Hdac4 Catalytic Domain Bound To A Hydroxamic
Acid Inhbitor
Length = 413
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 160/418 (38%), Positives = 245/418 (58%), Gaps = 42/418 (10%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 10 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 69
Query: 73 VHTENHVNLIKN--ISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 70 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 127
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 128 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 184
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 185 LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 242
Query: 235 GYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 243 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 302
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 303 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 362
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVET 404
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 363 QRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSL-------IEAQTCENEEAETVT 413
>gi|346973756|gb|EGY17208.1| histone deacetylase clr3 [Verticillium dahliae VdLs.17]
Length = 739
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/395 (37%), Positives = 223/395 (56%), Gaps = 37/395 (9%)
Query: 11 IKRR----VGLLYDERM---CKHNTPDGDYHPENPNRIKAIWNKLQAAGI----PQRCVV 59
++RR G YD+RM C + +HPE+P RI+ I + AG+ P+ V
Sbjct: 60 LRRRGQLPTGCCYDDRMKLHCNADFTSHPHHPEDPRRIEEIIKAFKKAGLLYTGPEANVA 119
Query: 60 -------------LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---- 102
+ A+EA + +L HT +H ++N+S+ + R ++ +L+
Sbjct: 120 KIVQHTPTKYMWRIAAREAAKEEILLAHTPDHYAWVENLSTMSYTELR-ALSVELDKGRA 178
Query: 103 SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVA 162
S+Y+ S AA L+ G I+ ++V E + +AFA++RPPGHHAE D+++GFC +NNV
Sbjct: 179 SLYVGSLSFPAALLSCGGAIDTCKQVVESNVKNAFAVIRPPGHHAEYDQSLGFCFFNNVP 238
Query: 163 VAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND- 221
VA E PE+ K+L++DWDVHHGN Q +F++DP VL+ S+H +E G FYP
Sbjct: 239 VAVKVCQQEYPEI-CRKVLVLDWDVHHGNGIQNIFYQDPNVLYISIHVYENGQFYPGQPE 297
Query: 222 -----DGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISA 276
DG G GPGLG NIN+ W GD +Y+A + I++P+AK+F PD+++ISA
Sbjct: 298 NPMVPDGGMEHCGTGPGLGKNINIGWHAQGMGDGEYMAAFQKIIMPIAKEFNPDLVVISA 357
Query: 277 GFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
GFDAA GD LGGC VTP Y+ M LM A GK+ + LEGGYNL +IS S +A L+
Sbjct: 358 GFDAADGDELGGCFVTPPCYAHMTHMLMSLADGKLAVCLEGGYNLRAISTSAVAVARTLM 417
Query: 337 EDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+ P ++ RV+ V+ + +W +
Sbjct: 418 GEPPPRMEIPKINRDAA-RVLATVQAYQAPYWECM 451
>gi|321461373|gb|EFX72406.1| histone deacetylase HDAC4 protein-like protein [Daphnia pulex]
Length = 1126
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 246/447 (55%), Gaps = 37/447 (8%)
Query: 5 SGEGRTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
+G +T L YD M +H G HPE+ R+++IW +LQ G RC+ L +
Sbjct: 680 AGGAKTGSTSTALAYDGLMLRHQCMCGSNSAHPEHGGRLQSIWARLQETGAVHRCLRLRS 739
Query: 63 KEAKDKNLLSVHTENHVNLI--KNISSKQFDSRRDRIASKLNSIYLNEG----------- 109
++A + L SVH++ + L + + + D R N + L G
Sbjct: 740 RKATAEELQSVHSDVYTMLFGTEPMHRPKVDVNRFAELPMKNFVMLPCGGIGVDSDTTWN 799
Query: 110 ---SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAAS 166
+ AA +AAG VI++A + A GE+ + FAIVRPPGHHAE +AMGFC +N+VA+AA
Sbjct: 800 DIHTPSAARMAAGCVIDLAFKAAMGEIRNGFAIVRPPGHHAEAQQAMGFCFFNSVAIAAK 859
Query: 167 FLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYT 226
L R + +ILIVDWDVHHGN TQ++F++DP +L+ S+HRH+ G F+P +
Sbjct: 860 QL---RLRHKLERILIVDWDVHHGNGTQQIFYEDPHILYISIHRHDDGHFFPGTGNPLE- 915
Query: 227 MIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG 283
G G+G+N+N+ W G GDA+YLA + +++P+A+DF P+I+++SAGFDAA G
Sbjct: 916 -CGSEDGIGFNVNIAWSGGLNPPLGDAEYLAAFRALVMPIAQDFDPEIVLVSAGFDAATG 974
Query: 284 --DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPV 341
PLGG +V+ + M ++LM+ A GK+V+ALEGGY+L +I ++ C+ LL D+PV
Sbjct: 975 HPSPLGGYQVSAACFGYMTRQLMELAGGKLVMALEGGYDLPAICDASHECVRALLGDEPV 1034
Query: 342 AGSSEAYPFESTWRVIQAVRKKLS---AFWPTLADELPTKLTSLKAPPAHMISSSDSEDE 398
E I ++ K +S WP + + SL A + S ED
Sbjct: 1035 PIREEELARRPCQNAIDSLHKVISIQQPHWPIIKRYAFS--VSLSAYEVEGVGRSRGEDS 1092
Query: 399 DTKVETLEAVLQVALSKLKVDDGHAEL 425
ETL A+ +++ + AEL
Sbjct: 1093 ----ETLSAMAGLSVCRTDSSKSIAEL 1115
>gi|351711781|gb|EHB14700.1| Histone deacetylase 9, partial [Heterocephalus glaber]
Length = 1050
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 629 TGIVYDTLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 688
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 689 VHSEHHSLLYGTSPLDGQKLDPRIFLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 748
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
A G VIE+A RVA GEL + FA VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 749 TAVGCVIELASRVASGELKNGFAAVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 805
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G GPG G
Sbjct: 806 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDDGNFFPGS--GAPNEVGTGPGEG 863
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + +++PVAK+F P+++++SAGFDA G PLGG +
Sbjct: 864 YNINIAWTGGLDPPMGDVEYLEAFRTVVMPVAKEFDPNMVLVSAGFDALEGHTPPLGGYK 923
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G+ VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 924 VTAKCFGHLTKQLMTLADGRAVLALEGGHDLTAICDASEACVNALLGNELEPLA 977
>gi|429848508|gb|ELA23980.1| histone deacetylase, partial [Colletotrichum gloeosporioides Nara
gc5]
Length = 651
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 220/400 (55%), Gaps = 50/400 (12%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----PQRCVV- 59
RR GLL YD+RM H D +HPE+P RI+ I+ + AG+ P+ V
Sbjct: 64 RRRGLLPTACCYDDRMKLHVNADFGATPHHPEDPRRIEEIFKAFKRAGLVYTGPEANVAQ 123
Query: 60 ------------LNAKEAKDKNLLSVHTENHVNLIKNIS----------SKQFDSRRDRI 97
+ A+EA +L+ HT +H ++++S SKQ+D R
Sbjct: 124 VLRDTPTKYMWRIGAREATKAEILTTHTPDHYRWVEDLSRMDYATLRETSKQYDQGR--- 180
Query: 98 ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCL 157
S+Y+ + A+ L+ G I+ + V EG + +AFA++RPPGHHAE D+ +GFC
Sbjct: 181 ----ASLYVGSLTFTASLLSCGGAIDTCKHVVEGNVKNAFAVIRPPGHHAEYDQPLGFCF 236
Query: 158 YNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFY 217
+NNV VA E P K+LI+DWDVHHGN Q +F+ DP VL+ S+H ++ G FY
Sbjct: 237 FNNVPVAVKICQQEYPA-DCRKVLILDWDVHHGNGIQNIFYDDPNVLYISLHVYQNGIFY 295
Query: 218 PANDD------GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
P D G G GPGLG NIN+ W + GD +Y+A + I++P+AK+F PD+
Sbjct: 296 PGKPDNQDIPDGGLEHCGTGPGLGKNINIGWHDQGMGDGEYMAAFQKIIMPIAKEFNPDL 355
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLAC 331
++ISAGFDAAAGD LGGC VTP Y+ M LM A GK+ + LEGGYNL +IS S +A
Sbjct: 356 VVISAGFDAAAGDELGGCFVTPTCYAHMTHMLMSLADGKVAVCLEGGYNLQAISTSAVAV 415
Query: 332 MNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
L+ + P ++ RV+ V+ + +W +
Sbjct: 416 ARTLMGEPPPKMDIPMLNKDAA-RVLAKVQSYQAPYWECM 454
>gi|350538275|ref|NP_001233710.1| histone deacetylase 5 [Cricetulus griseus]
gi|81871143|sp|Q80ZH1.1|HDAC5_CRIGR RecName: Full=Histone deacetylase 5; Short=HD5
gi|28627825|gb|AAN46420.1| histone deacetylase 5 [Cricetulus griseus]
Length = 1111
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 215/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 672 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 731
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 732 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 791
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 792 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 848
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 849 NVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGMG 906
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 907 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 966
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 967 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1012
>gi|346320693|gb|EGX90293.1| histone deacetylase [Cordyceps militaris CM01]
Length = 729
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 210/362 (58%), Gaps = 44/362 (12%)
Query: 15 VGLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----PQ----RCV----- 58
G YD+RM H D +HPE+P RI I+ + G+ PQ R V
Sbjct: 58 TGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKKMGLVYTGPQSELPRIVKESPT 117
Query: 59 ----VLNAKEAKDKNLLSVHTENHVNLIKNIS----------SKQFDSRRDRIASKLNSI 104
+ A+ A+ + H+ H+ +++I ++QFD R+ S+
Sbjct: 118 KYMWRIPARPARRDEICLAHSAEHLTWVESIDKLSSSELRALTRQFDQGRE-------SL 170
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y+ S AA L+AG I+ + V EG++ +AFA++RPPGHHAE D+AMGFC +NNV VA
Sbjct: 171 YVGSMSYPAALLSAGGAIDTCKNVVEGQVKNAFAVIRPPGHHAEYDQAMGFCFFNNVPVA 230
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND--- 221
+ P++ K+LI+DWDVHHGN Q +F+ DP VL+ S+H ++ G+FYP
Sbjct: 231 VRVCQQDYPDI-CRKVLILDWDVHHGNGVQNIFYNDPNVLYISIHVYQNGSFYPGKSPDP 289
Query: 222 ---DGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
DG G GPGLG NIN+ W + GD +Y+A ++ +++P+AK+F PD+++ISAGF
Sbjct: 290 SVPDGGIENCGIGPGLGKNINIGWHDQGMGDGEYMAAFEKLVMPIAKEFDPDLVVISAGF 349
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
DAA GD LGGC VTP Y+ M LM A+G++ + LEGGYNL +ISNS +A L+ +
Sbjct: 350 DAADGDELGGCFVTPSCYAHMTHMLMSLAEGRVAVCLEGGYNLQAISNSAVAVARTLMGE 409
Query: 339 KP 340
P
Sbjct: 410 PP 411
>gi|28629389|gb|AAO27363.1| histone deacetylase 9 [Homo sapiens]
Length = 1069
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 636 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 695
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 696 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELRSSGAAR 755
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 756 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 812
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 813 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 870
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 871 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 930
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 931 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 984
>gi|30795204|ref|NP_848512.1| histone deacetylase 9 isoform 5 [Homo sapiens]
Length = 1069
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 636 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 695
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 696 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 755
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 756 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 812
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 813 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 870
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 871 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 930
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 931 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 984
>gi|357111513|ref|XP_003557557.1| PREDICTED: histone deacetylase 15-like [Brachypodium distachyon]
Length = 619
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 158/359 (44%), Positives = 213/359 (59%), Gaps = 22/359 (6%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DE+M H+ + + HPE PNR++AI L AAGI P +C ++ +E K LL VHT
Sbjct: 203 FDEQMLLHSEVEIKPNPHPERPNRLRAIAASLAAAGIFPSKCALVPPREITKKELLMVHT 262
Query: 76 ENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+HV + KN+ F S Y N+ S+ AA LAAG ++A + G
Sbjct: 263 SDHVESVEQTKNMLYSYFTS----------DTYANKESARAAKLAAGLCADLASLIVSGR 312
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+N+ FA+VRPPGHHA +AMGFCL+NN AVAA K+LIVDWDVHHGN
Sbjct: 313 VNNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAQKAG----AKKVLIVDWDVHHGNG 368
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F + VL+ S+HRHE G FYP G +G G G+++N+PW G GD DY
Sbjct: 369 TQEIFEGNKSVLYISLHRHEDGNFYPGT--GAAHEVGVLDGQGFSVNIPWSCGGVGDDDY 426
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ + H++LP+A +F PDI I+SAGFDAA GDPLG C VTP GYS M L ++G+++
Sbjct: 427 IFAFQHVVLPIAAEFAPDITIVSAGFDAARGDPLGCCDVTPAGYSQMTSMLTTCSEGRLL 486
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+ LEGGYNL SIS+S + VLL D P G A P + + + V + +WP L
Sbjct: 487 IILEGGYNLRSISSSATEVVKVLLGDGPCYGKGAAAPSKEGMQTVLQVLEIQQQYWPVL 545
>gi|345306977|ref|XP_001510939.2| PREDICTED: histone deacetylase 4-like [Ornithorhynchus anatinus]
Length = 1122
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 249/429 (58%), Gaps = 42/429 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI+++W++LQ G+ +C + ++A + L +
Sbjct: 692 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSVWSRLQETGLRGKCECIRGRKATLEELQT 751
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 752 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 809
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 810 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 866
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 867 LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GSPDEVGTGPGV 924
Query: 235 GYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YL + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 925 GFNVNMAFTGGLDPPMGDAEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 984
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP 349
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL ++ +
Sbjct: 985 NLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1044
Query: 350 FESTWRVIQAVRKKL---SAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
S + ++ K + S +W +L T SL I + E+E+ + T
Sbjct: 1045 QRSNENAVHSMEKVIEIHSKYWRSLQRFSSTVGYSL-------IEAQKCENEEAETVTAM 1097
Query: 407 AVLQVALSK 415
A L V + +
Sbjct: 1098 ASLSVGVKQ 1106
>gi|348511631|ref|XP_003443347.1| PREDICTED: histone deacetylase 4-like [Oreochromis niloticus]
Length = 1117
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 232/377 (61%), Gaps = 25/377 (6%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+Y+ M KH G HPE+ RI++IW++LQ G+ C + ++A + L +
Sbjct: 693 TGLVYESLMQKHQCICGSTTSHPEHAGRIQSIWSRLQETGLRAHCECIRGRKASLEELQT 752
Query: 73 VHTENHVNLI-KNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSVI 122
VH+E HV L N ++ DS + + +L ++I+ SS AA LA GSV+
Sbjct: 753 VHSEAHVMLYGTNPLRQKLDSSVNPMFVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVV 812
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E+ +VA GEL + FAIVRPPGHHAE MGFC +N+VA+AA LL +R L ++KILI
Sbjct: 813 ELVFKVASGELKNGFAIVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LSVSKILI 869
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G G+N+N+ +
Sbjct: 870 VDWDVHHGNGTQQAFYADPSVLYLSLHRYDDGNFFPGS--GAPDEVGSGAGEGFNVNMAF 927
Query: 243 ENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYS 297
G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG ++T +
Sbjct: 928 TGGLDPPMGDAEYLAAFRTVVMPIANEFAPDMVLVSSGFDAVDGHAPPLGGYKLTAKCFG 987
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFESTW 354
+ ++LM A G++VLALEGG++L +I ++ AC++ LL E P+ + P +
Sbjct: 988 YLTRQLMGLAGGRLVLALEGGHDLTAICDASEACISALLGNELDPIPDEVLQQRPNANAV 1047
Query: 355 RVIQAVRKKLSAFWPTL 371
R ++ V + S +W +L
Sbjct: 1048 RSMEKVIEFHSKYWCSL 1064
>gi|449524984|ref|XP_004169501.1| PREDICTED: histone deacetylase 5-like, partial [Cucumis sativus]
Length = 225
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 134/224 (59%), Positives = 163/224 (72%), Gaps = 3/224 (1%)
Query: 425 LGMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILW 484
+ + PWRSELSK D++YA+FGSN+W R LCYI GGQVEGM++ C+GS D PPKEI+W
Sbjct: 3 VNVTQPWRSELSKTDIWYAAFGSNLWCPRLLCYIRGGQVEGMKRSCTGSMDTTPPKEIMW 62
Query: 485 KTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENVYSDD 544
K+FPH LFFGH+ + TWG GGVAFLNPE + K+YLCLYRITLEQFND+L QEN S
Sbjct: 63 KSFPHRLFFGHEHTSTWGQGGVAFLNPESNSEEKSYLCLYRITLEQFNDLLYQENNASSS 122
Query: 545 VS-SPLFDTNDLNSVANKKAVSLEA-LKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFK 602
+S +PL D +LN V + + S+E GWYHN+VYLGKE IPILTMTCS S + FK
Sbjct: 123 LSDNPLLDIANLNKVTSSPSNSVEVPTGKGWYHNLVYLGKERDIPILTMTCSHSDMEDFK 182
Query: 603 SGEFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
G+ P+ +PA Y NTL+ GL G LS+EEA YI ASTK L
Sbjct: 183 DGKIPICSPAKEYVNTLVLGLA-GGPLSKEEALEYIRNASTKPL 225
>gi|397509317|ref|XP_003825074.1| PREDICTED: histone deacetylase 9 isoform 1 [Pan paniscus]
Length = 1069
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 636 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 695
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 696 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 755
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 756 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 812
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 813 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 870
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 871 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 930
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 931 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 984
>gi|297288747|ref|XP_001103866.2| PREDICTED: histone deacetylase 9-like isoform 1 [Macaca mulatta]
gi|355747791|gb|EHH52288.1| hypothetical protein EGM_12709 [Macaca fascicularis]
Length = 1069
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 636 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 695
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 696 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 755
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 756 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 812
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 813 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 870
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 871 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 930
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 931 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 984
>gi|390466665|ref|XP_002751569.2| PREDICTED: histone deacetylase 9 isoform 1 [Callithrix jacchus]
Length = 1088
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 655 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 714
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 715 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 774
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 775 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 831
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 832 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 889
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 890 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 949
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 950 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 1003
>gi|47220230|emb|CAF98995.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1017
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 244/431 (56%), Gaps = 45/431 (10%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ C + ++A + L +
Sbjct: 595 TGLVYDSLMQKHQCMCGNTTVHPEHAGRIQSIWSRLQETGLRAHCECIRGRKASLEELQT 654
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKL-------------NSIYLNEGSSEAAYLAAG 119
VH+E HV L +Q + D S + ++I+ SS AA LA G
Sbjct: 655 VHSEAHVLLYGTNPLRQ---KHDCSVSPMFVMLPCGGIGVDSDTIWNEVHSSTAARLAVG 711
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
SV E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L + K
Sbjct: 712 SVAELVFKVASGELKNGFAVVRPPGHHAEESAPMGFCYFNSVAIAAK-LLQQR--LNVRK 768
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
ILIVDWDVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G GPG G+N+N
Sbjct: 769 ILIVDWDVHHGNGTQQAFYADPGILYISLHRYDDGNFFPGS--GAPDEVGSGPGAGFNVN 826
Query: 240 VPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPY 294
+ + G GD +YLA + +++P+A +F PD++++S+GFDA G PLGG ++T
Sbjct: 827 MAFTGGLEPPMGDVEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVDGHASPLGGYKLTAK 886
Query: 295 GYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGS-SEAYPFE 351
+ + ++LM A+G++VLALEGG++L +I ++ AC++ LL E +P+ P
Sbjct: 887 CFGYLTRQLMALAEGRLVLALEGGHDLTAICDASEACVSALLGNELEPIPDEVMRQRPNA 946
Query: 352 STWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQV 411
+ R ++ V S +W +L T SL E + +T EA
Sbjct: 947 NAVRSMEKVVGAHSKYWRSLQRSASTLACSL--------------SERLQRDTEEAETVS 992
Query: 412 ALSKLKVDDGH 422
A++ L V + H
Sbjct: 993 AMASLSVANKH 1003
>gi|332207159|ref|XP_003252663.1| PREDICTED: histone deacetylase 9 isoform 2 [Nomascus leucogenys]
Length = 1069
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 636 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 695
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 696 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 755
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 756 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 812
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 813 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 870
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 871 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 930
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 931 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 984
>gi|365991928|ref|XP_003672792.1| hypothetical protein NDAI_0L00640 [Naumovozyma dairenensis CBS 421]
gi|410729811|ref|XP_003671084.2| hypothetical protein NDAI_0G00650 [Naumovozyma dairenensis CBS 421]
gi|401779903|emb|CCD25841.2| hypothetical protein NDAI_0G00650 [Naumovozyma dairenensis CBS 421]
Length = 689
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 202/345 (58%), Gaps = 20/345 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ GL YD RM H Y HPE+P RI I+ L G I
Sbjct: 40 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLIKDPTLSGIDDIGD 99
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ + +EA + +L VH++ H++ I++ +SK + + +S+Y N S +A
Sbjct: 100 LMLKIPVREATSEEILEVHSKEHLDFIES-TSKMNREQLLKATESGDSVYFNSDSYASAK 158
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L G IE + V EG + +A A+VRPPGHHAEP+ A GFCL++NVA+AA +L PE
Sbjct: 159 LPVGGAIEACKAVVEGRVKNALAVVRPPGHHAEPEAAGGFCLFSNVAIAAKNILKNYPE- 217
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ KILI+DWD+HHGN TQK F+ D R+L+ S+HR + G +YP G Y GEG G G
Sbjct: 218 SVRKILILDWDIHHGNGTQKAFYDDDRILYVSLHRFKMGKYYPGTIHGRYDQTGEGKGEG 277
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N N+ W G GDA+Y+ ++ I++P+ ++F PD++IISAGFDAA GD +G C VTP
Sbjct: 278 FNCNITWPVGGVGDAEYMWAFEQIVMPMGREFQPDLVIISAGFDAADGDTIGQCHVTPSC 337
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL SI+ S L+ +L+ + P
Sbjct: 338 YGHMTHMLKSLARGNMAVVLEGGYNLDSIAISALSVAKILIGEPP 382
>gi|154298249|ref|XP_001549548.1| hypothetical protein BC1G_11969 [Botryotinia fuckeliana B05.10]
Length = 780
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/352 (40%), Positives = 209/352 (59%), Gaps = 34/352 (9%)
Query: 16 GLLYDERMCKHNTPDGDY-----HPENPNRIKAIWNKLQAAGI----------------P 54
G+ YD+RM H + GDY HPE+P RI+ I + AG+ P
Sbjct: 88 GVCYDDRMKLHTS--GDYSDNTAHPEDPRRIEHIMRAFKDAGLVYTGNAENVEKILKESP 145
Query: 55 QRCVV-LNAKEAKDKNLLSVHTENHVNLIKNI---SSKQFDSRRDRIASKLNSIYLNEGS 110
+ + + A+ A+ + HT H + ++++ +S++ R + S+Y+ +
Sbjct: 146 NKYMQRIMARLARKDEICLAHTAFHYDWVESLLSMTSEELREANQRYDTGRKSLYVGPCT 205
Query: 111 SEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLN 170
+AA +AAG IE + V G + +A AI+RPPGHHAE +EA+GFC++NNV +AA +
Sbjct: 206 YDAALVAAGGAIETCKHVVVGNVKNAIAIIRPPGHHAEENEALGFCVFNNVPIAAKVCMA 265
Query: 171 ERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD------GF 224
+ PE+ K+LI+DWD+HHGN TQ MF+ DP VL+ S+H ++ G FYP D G
Sbjct: 266 DYPEI-CRKVLILDWDIHHGNGTQNMFYDDPNVLYISLHVYDNGQFYPGQPDDPSLPDGG 324
Query: 225 YTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284
+G G GLG N+N+ W + GD +Y+A + I++P+A++F PD++IISAGFDAAAGD
Sbjct: 325 NDKVGRGAGLGKNVNIGWVSQGMGDGEYMAAFQRIVMPIAQEFDPDLVIISAGFDAAAGD 384
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
LGGC VTP YS M LM A GK+ + LEGGYNL +IS S LA L+
Sbjct: 385 ELGGCFVTPACYSHMTHMLMSLADGKVAVCLEGGYNLAAISQSALAVAKTLM 436
>gi|347831677|emb|CCD47374.1| hypothetical protein [Botryotinia fuckeliana]
Length = 796
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/352 (40%), Positives = 209/352 (59%), Gaps = 34/352 (9%)
Query: 16 GLLYDERMCKHNTPDGDY-----HPENPNRIKAIWNKLQAAGI----------------P 54
G+ YD+RM H + GDY HPE+P RI+ I + AG+ P
Sbjct: 104 GVCYDDRMKLHTS--GDYSDNTAHPEDPRRIEHIMRAFKDAGLVYTGNAENVEKILKESP 161
Query: 55 QRCVV-LNAKEAKDKNLLSVHTENHVNLIKNI---SSKQFDSRRDRIASKLNSIYLNEGS 110
+ + + A+ A+ + HT H + ++++ +S++ R + S+Y+ +
Sbjct: 162 NKYMQRIMARLARKDEICLAHTAFHYDWVESLLSMTSEELREANQRYDTGRKSLYVGPCT 221
Query: 111 SEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLN 170
+AA +AAG IE + V G + +A AI+RPPGHHAE +EA+GFC++NNV +AA +
Sbjct: 222 YDAALVAAGGAIETCKHVVVGNVKNAIAIIRPPGHHAEENEALGFCVFNNVPIAAKVCMA 281
Query: 171 ERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD------GF 224
+ PE+ K+LI+DWD+HHGN TQ MF+ DP VL+ S+H ++ G FYP D G
Sbjct: 282 DYPEI-CRKVLILDWDIHHGNGTQNMFYDDPNVLYISLHVYDNGQFYPGQPDDPSLPDGG 340
Query: 225 YTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284
+G G GLG N+N+ W + GD +Y+A + I++P+A++F PD++IISAGFDAAAGD
Sbjct: 341 NDKVGRGAGLGKNVNIGWVSQGMGDGEYMAAFQRIVMPIAQEFDPDLVIISAGFDAAAGD 400
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
LGGC VTP YS M LM A GK+ + LEGGYNL +IS S LA L+
Sbjct: 401 ELGGCFVTPACYSHMTHMLMSLADGKVAVCLEGGYNLAAISQSALAVAKTLM 452
>gi|344252069|gb|EGW08173.1| Histone deacetylase 5 [Cricetulus griseus]
Length = 1081
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 215/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 673 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 732
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 733 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 792
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 793 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 849
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 850 NVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGMG 907
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 908 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 967
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 968 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1013
>gi|426355567|ref|XP_004045188.1| PREDICTED: histone deacetylase 9 isoform 3 [Gorilla gorilla
gorilla]
Length = 1069
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 636 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 695
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 696 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 755
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 756 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 812
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 813 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 870
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 871 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 930
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 931 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 984
>gi|74140673|dbj|BAE43272.1| unnamed protein product [Mus musculus]
gi|148708072|gb|EDL40019.1| histone deacetylase 4, isoform CRA_c [Mus musculus]
Length = 910
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 220/347 (63%), Gaps = 32/347 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 480 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 539
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 540 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 597
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 598 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 654
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 655 LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 712
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 713 GFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 772
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 773 NLSAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALL 819
>gi|431912018|gb|ELK14159.1| Histone deacetylase 5 [Pteropus alecto]
Length = 977
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 220/363 (60%), Gaps = 36/363 (9%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 538 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 597
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 598 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 657
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 658 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 714
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 715 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGMG 772
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 773 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 832
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPF 350
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL S E P
Sbjct: 833 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL-------SVELQPL 885
Query: 351 EST 353
+ T
Sbjct: 886 DET 888
>gi|324501233|gb|ADY40550.1| Histone deacetylase 4 [Ascaris suum]
Length = 871
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/381 (40%), Positives = 216/381 (56%), Gaps = 26/381 (6%)
Query: 14 RVGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+ GL+YD M KH D H E+ R+ +IW +LQ G+ C + A++A + L
Sbjct: 469 KTGLVYDSAMSKHQCVCADNKNHVEHGGRVHSIWARLQERGLVDNCERVVARKAPLEMLR 528
Query: 72 SVHTENHVNL--IKNISSKQFDSRRDRIASKL----------NSIYLNEGSSE-AAYLAA 118
+VH+ +V I + + + + + S + + Y N+ ++ AA +A
Sbjct: 529 TVHSPTYVTFFAISPTACLKMEPSQLPVKSFVQLPCGGIGVDSDTYFNDACTQLAARIAV 588
Query: 119 GSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN 178
GS+ E+A +VAEG+L + FA +RPPGHHAE D+AMGFC +NNVA+ +L E+
Sbjct: 589 GSLAELASQVAEGKLRNGFACIRPPGHHAENDQAMGFCFFNNVAITVKYLQQRYREV-CA 647
Query: 179 KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNI 238
+I I+DWDVHHGN TQ F DP VL+ S+HRH+ G F+P G T +G G G GY +
Sbjct: 648 RIAIIDWDVHHGNGTQLCFESDPSVLYLSLHRHDNGNFFPGT--GAVTEVGTGAGKGYTV 705
Query: 239 NVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGY 296
NVP+ DADYLA W ++ PV F P I++SAGFDAA G LGG +TP +
Sbjct: 706 NVPFSGEMMADADYLAAWRVVVAPVLDQFQPTFIMVSAGFDAAKGHSQALGGYSLTPQLF 765
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP-VAG--SSEAY---PF 350
++LM +A G++VLALEGGY+L +IS+S C+ VL +D P AG S EA P
Sbjct: 766 GYFTRQLMSYANGRVVLALEGGYDLAAISDSAEECVKVLCDDSPETAGKLSEEALNTIPK 825
Query: 351 ESTWRVIQAVRKKLSAFWPTL 371
+S IQ V W +L
Sbjct: 826 QSAQEAIQKVVAIHKKHWSSL 846
>gi|406863156|gb|EKD16204.1| hypothetical protein MBM_05498 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 795
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 222/387 (57%), Gaps = 33/387 (8%)
Query: 15 VGLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAG-IPQRCVV----------- 59
G YD+RM H D +HPE+P RI+AI + + G I +R +
Sbjct: 71 TGCCYDDRMKFHANADFSSSPHHPEDPRRIEAIMTEFKTHGLILERSQIQVKNEIKLDPS 130
Query: 60 -----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---SIYLNEGSS 111
+ A+EA + + +VHT +H ++++S + R N S+Y+ +
Sbjct: 131 KYMWRIAAREATREEICTVHTASHFEWVRSLSQMSSEDLRQLTNDYDNGRKSLYVGNLTY 190
Query: 112 EAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNE 171
EAA ++AG IE + + G++ +A A++RPPGHHAE +E++GFC++NNV +AA + +
Sbjct: 191 EAALISAGGAIETCKNIVAGKVKNAIAVIRPPGHHAEHNESLGFCIFNNVPIAARICMAD 250
Query: 172 RPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND------DGFY 225
PE K+LI+DWDVHHGN Q +F+ DP VL+ S+H + G+FYP DG
Sbjct: 251 YPE-SCRKVLILDWDVHHGNGIQNIFYDDPNVLYISIHVYMNGSFYPGQPEIDGIPDGGL 309
Query: 226 TMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP 285
G G GLG NIN+ W GD +Y+A + I++P+A++F PD++I+SAGFDAAAGD
Sbjct: 310 DKCGVGKGLGKNINIGWPEQGVGDGEYMAAFQRIVMPIAQEFDPDLVIVSAGFDAAAGDD 369
Query: 286 LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSS 345
LGGC V+ YS M LM A GK+ + LEGGYNLG+IS S LA L+ + P+
Sbjct: 370 LGGCWVSQACYSHMTHMLMSLANGKVAVCLEGGYNLGAISRSALAVAKTLMGEPPM--RL 427
Query: 346 EAYPF-ESTWRVIQAVRKKLSAFWPTL 371
+ P ++ ++ V++ SA+W +
Sbjct: 428 KIPPLNKAAAHTLENVKRIQSAYWECM 454
>gi|426226717|ref|XP_004007485.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 7 [Ovis aries]
Length = 912
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 249/444 (56%), Gaps = 41/444 (9%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++L G+ +C L ++A
Sbjct: 474 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLLERGLRSQCESLRGRKAS 533
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 534 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 593
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 594 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 653
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 654 QQG---KASKILIVDWDVHHGNGTQQTFYQDPTVLYISLHRHDDGNFFPGS--GAVDEVG 708
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 709 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPP 768
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 769 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 828
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E + P + R ++AV + S +W + +L S H + +D+E+
Sbjct: 829 EEGWKQKPNLNAIRSLEAVIRVHSEYWGCM-----QRLASRPDSWVHRVPGADAEE---- 879
Query: 402 VETLEAVLQVALSKLKVDDGHAEL 425
VE + A+ +++ L + +L
Sbjct: 880 VEAVTALASLSVGILAEERTSGQL 903
>gi|324073135|ref|NP_001191205.1| histone deacetylase 7 isoform 2 [Mus musculus]
Length = 946
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 515 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 574
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 575 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 634
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 635 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 691
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 692 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 749
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 750 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 809
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 810 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 869
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 870 KPNLSAIRSLEAVVRVHRKYW 890
>gi|194376962|dbj|BAG63042.1| unnamed protein product [Homo sapiens]
Length = 1014
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 214/355 (60%), Gaps = 29/355 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 570 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 629
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 630 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 689
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 690 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 749
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 750 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 804
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 805 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 864
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++
Sbjct: 865 PLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNR 919
>gi|444516647|gb|ELV11238.1| Histone deacetylase 5 [Tupaia chinensis]
Length = 1120
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 215/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 682 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 741
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 742 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 801
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 802 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 858
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 859 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGIG 916
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 917 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 976
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 977 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1022
>gi|440897605|gb|ELR49254.1| Histone deacetylase 7, partial [Bos grunniens mutus]
Length = 977
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/435 (37%), Positives = 246/435 (56%), Gaps = 41/435 (9%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++L G+ +C L ++A
Sbjct: 554 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLLERGLRSQCESLRGRKAS 613
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 614 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 673
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 674 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 733
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 734 QQG---KASKILIVDWDVHHGNGTQQTFYQDPNVLYISLHRHDDGNFFPGS--GAVDEVG 788
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 789 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPP 848
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 849 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 908
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E + P + R ++AV + S +W + +L S H + +D+E+
Sbjct: 909 EEGWKQKPNLNAIRSLEAVIRVHSEYWGCM-----QRLASRPDSWVHRVPGADAEE---- 959
Query: 402 VETLEAVLQVALSKL 416
VE + A+ +++ L
Sbjct: 960 VEAVTALASLSVGIL 974
>gi|26331526|dbj|BAC29493.1| unnamed protein product [Mus musculus]
Length = 946
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 515 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 574
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 575 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 634
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 635 WAAGSVTDLAFKVASRELRNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 691
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 692 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 749
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 750 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 809
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 810 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 869
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 870 KPNLSAIRSLEAVVRVHRKYW 890
>gi|392928253|ref|NP_001257278.1| Protein HDA-4, isoform a [Caenorhabditis elegans]
gi|408360267|sp|O17323.3|HDA4_CAEEL RecName: Full=Histone deacetylase 4; AltName: Full=CeHDA-7;
AltName: Full=Histone deacetylase 7
gi|373253943|emb|CCD64116.1| Protein HDA-4, isoform a [Caenorhabditis elegans]
Length = 869
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 215/379 (56%), Gaps = 25/379 (6%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL YD+ M +H G+ H EN RI++IW+KL G Q+C + AK+A + L
Sbjct: 462 TGLGYDQAMVRHECCCGNNASHVENGGRIQSIWSKLIEHGHVQKCEKVTAKKASLEQLQL 521
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL----------NSIYLNEGSSE-AAYLAAG 119
VH++ + + + + D+ + L + Y N+ S++ AA LAAG
Sbjct: 522 VHSQTYTTFFAVSPTACLKIDANSLPLKRFLQLPCGGIGVDSDTYFNDASTQTAARLAAG 581
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
++IE++ +VAEG L + FA +RPPGHHAE ++AMGFC +NNVAVA L + P K
Sbjct: 582 TLIELSSQVAEGRLKNGFACIRPPGHHAEHEQAMGFCFFNNVAVAVKVLQTKYPA-QCAK 640
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
I I+DWDVHHGN TQ F DP VL+ S+HRH+ G F+P G T +G+ G +N
Sbjct: 641 IAIIDWDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPGT--GSVTEVGKNDAKGLTVN 698
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYS 297
VP+ D +YLA W ++ PV F PD II+SAGFDA G P LGG VTP +
Sbjct: 699 VPFSGDVMRDPEYLAAWRTVIEPVMASFCPDFIIVSAGFDACHGHPNALGGYEVTPEMFG 758
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG-----SSEAYPFES 352
M K L+++A GK+VLALEGGY+L SIS + C+ L+ + AG + E+ P S
Sbjct: 759 YMTKSLLNYASGKVVLALEGGYDLKSISEAAQQCVQALIGESDDAGRLSSVALESLPNPS 818
Query: 353 TWRVIQAVRKKLSAFWPTL 371
+Q V ++WP L
Sbjct: 819 AVETLQKVIAIHKSYWPAL 837
>gi|393912418|gb|EJD76727.1| histone deacetylase 4 [Loa loa]
Length = 834
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 220/394 (55%), Gaps = 26/394 (6%)
Query: 1 MEVKSGEGRTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCV 58
+ ++SG + + + GL+YD M +H G+ H E+ R+++IW++LQ G+ ++C
Sbjct: 419 LRLQSGSVLSTQLKTGLVYDPAMARHQCFCGNNRNHVEHGERVQSIWSRLQERGLVEKCE 478
Query: 59 VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL------------NSIYL 106
+ A++A + L +VH +V + ++ K + Y
Sbjct: 479 RVFARKAPLEMLRTVHAPTYVTFFAVSPTACLKMEPSQLPVKSFVQLSCGGIGVDSDTYF 538
Query: 107 NEGSSE-AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA 165
N+ S++ AA +A GS+ E+A +VAE L + FA +RPPGHHAE ++AMGFC NNVA+A
Sbjct: 539 NDASTQLAARIAVGSLAELALQVAESRLRNGFACIRPPGHHAEYNQAMGFCFLNNVAIAV 598
Query: 166 SFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFY 225
+ L +R ++I I+DWDVHHGN TQ F DP VL+ S+HRH+ G F+P G
Sbjct: 599 KY-LQQRCAEQCSRIAIIDWDVHHGNGTQICFEADPSVLYLSLHRHDNGNFFPGT--GAV 655
Query: 226 TMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG-- 283
T +G G G GY +N+P+ DADYLA W I+ P+ +F P II+SAGFDAA G
Sbjct: 656 TEVGVGSGKGYTVNIPFSGEMMDDADYLAAWRVIVAPILNEFKPTFIIVSAGFDAACGHS 715
Query: 284 DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG 343
LGG ++P + ++LM++A G++VLALEGGYNL +IS+S C+ L P
Sbjct: 716 QALGGYNLSPQLFGYFTRQLMNYAGGRVVLALEGGYNLDTISDSAEECVKALCGGSPETT 775
Query: 344 SS------EAYPFESTWRVIQAVRKKLSAFWPTL 371
A+P +S IQ V WP+L
Sbjct: 776 GKLSDKALNAFPKQSAQETIQKVIAIHKKHWPSL 809
>gi|300797967|ref|NP_001180070.1| histone deacetylase 7 [Bos taurus]
gi|296487765|tpg|DAA29878.1| TPA: histone deacetylase 7-like [Bos taurus]
Length = 988
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 249/444 (56%), Gaps = 41/444 (9%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++L G+ +C L ++A
Sbjct: 550 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLLERGLRSQCESLRGRKAS 609
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 610 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 669
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 670 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 729
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 730 QQG---KASKILIVDWDVHHGNGTQQTFYQDPNVLYISLHRHDDGNFFPGS--GAVDEVG 784
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 785 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPP 844
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 845 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLS 904
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
E + P + R ++AV + S +W + +L S H + +D+E+
Sbjct: 905 EEGWKQKPNLNAIRSLEAVIRVHSEYWGCM-----QRLASRPDSWVHRVPGADAEE---- 955
Query: 402 VETLEAVLQVALSKLKVDDGHAEL 425
VE + A+ +++ L + +L
Sbjct: 956 VEAVTALASLSVGILAEERTSGQL 979
>gi|30795202|ref|NP_848510.1| histone deacetylase 9 isoform 4 [Homo sapiens]
gi|30089124|emb|CAD30851.1| histone decetylase 9b [Homo sapiens]
Length = 1066
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 633 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 692
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 693 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 752
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 753 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 809
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 867
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 868 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 927
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 928 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 981
>gi|332864793|ref|XP_518986.3| PREDICTED: histone deacetylase 9 isoform 11 [Pan troglodytes]
Length = 1069
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 636 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 695
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 696 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSRKFFSSLPCGGLGVDSDTIWNELHSSGAAR 755
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 756 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 812
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 813 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 870
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 871 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 930
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 931 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 984
>gi|297288748|ref|XP_001104451.2| PREDICTED: histone deacetylase 9-like isoform 7 [Macaca mulatta]
Length = 1066
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 633 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 692
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 693 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 752
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 753 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 809
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 867
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 868 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 927
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 928 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 981
>gi|17158039|ref|NP_478056.1| histone deacetylase 9 isoform 1 [Homo sapiens]
gi|19865267|sp|Q9UKV0.2|HDAC9_HUMAN RecName: Full=Histone deacetylase 9; Short=HD9; AltName:
Full=Histone deacetylase 7B; Short=HD7; Short=HD7b;
AltName: Full=Histone deacetylase-related protein;
AltName: Full=MEF2-interacting transcription repressor
MITR
gi|15590680|gb|AAK66821.1| histone deacetylase 9 [Homo sapiens]
gi|119614111|gb|EAW93705.1| histone deacetylase 9, isoform CRA_e [Homo sapiens]
Length = 1011
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 633 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 692
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 693 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 752
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 753 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 809
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 867
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 868 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 927
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 928 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 981
>gi|354502072|ref|XP_003513111.1| PREDICTED: histone deacetylase 7-like isoform 2 [Cricetulus
griseus]
Length = 895
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 228/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ RC L ++A + L S
Sbjct: 464 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSRCECLRGRKASLEELQS 523
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + +A ++ ++I+ SS AA
Sbjct: 524 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAAR 583
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L +
Sbjct: 584 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQG--- 640
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 641 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGNGEG 698
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 699 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 758
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S E +
Sbjct: 759 VSAKCFGYMTQQLMTLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDLLSEEGWKQ 818
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P + R ++AV + +W
Sbjct: 819 KPNPNAIRSLEAVIRVHRKYW 839
>gi|332207165|ref|XP_003252666.1| PREDICTED: histone deacetylase 9 isoform 5 [Nomascus leucogenys]
Length = 1066
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 633 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 692
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 693 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 752
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 753 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 809
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 867
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 868 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 927
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 928 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 981
>gi|74226851|dbj|BAE27070.1| unnamed protein product [Mus musculus]
Length = 527
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 96 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 155
Query: 73 VHTENHVNLIKN--ISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 156 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 215
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 216 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHGK-- 273
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 274 -ASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 330
Query: 236 YNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 331 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 390
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 391 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 450
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 451 KPNLSAIRSLEAVVRVHRKYW 471
>gi|354502074|ref|XP_003513112.1| PREDICTED: histone deacetylase 7-like isoform 3 [Cricetulus
griseus]
Length = 854
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 228/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ RC L ++A + L S
Sbjct: 423 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSRCECLRGRKASLEELQS 482
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + +A ++ ++I+ SS AA
Sbjct: 483 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAAR 542
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L +
Sbjct: 543 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQG--- 599
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 600 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGNGEG 657
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 658 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 717
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S E +
Sbjct: 718 VSAKCFGYMTQQLMTLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDLLSEEGWKQ 777
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P + R ++AV + +W
Sbjct: 778 KPNPNAIRSLEAVIRVHRKYW 798
>gi|324073184|ref|NP_001191210.1| histone deacetylase 7 isoform 8 [Mus musculus]
Length = 851
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 420 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 479
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 480 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 539
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 540 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 596
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 597 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 654
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 655 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 714
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 715 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 774
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 775 KPNLSAIRSLEAVVRVHRKYW 795
>gi|351705825|gb|EHB08744.1| Histone deacetylase 4, partial [Heterocephalus glaber]
Length = 1077
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 251/427 (58%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 647 TGLVYDTLMLKHQCACGNTNSHPEHAGRIQSIWSRLQETGLRSKCECVRGRKATLEELQT 706
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 707 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 764
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 765 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAR-LLQQR-- 821
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L +++ILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 822 LSVSRILIVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGV 879
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GD +YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 880 GFNVNMAFTGGLDPPMGDTEYLAAFRTVVMPIANEFAPDMVLVSSGFDAVEGHPTPLGGY 939
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E +P+ +
Sbjct: 940 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLQ 999
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + +W L +L+S +I + E+E+ + T
Sbjct: 1000 QRPNANAVRSMEKVVEIHGKYWRCL-----HRLSSTVG--HSLIQAQKCENEEAETVTAM 1052
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1053 ASLSVGV 1059
>gi|403295613|ref|XP_003938730.1| PREDICTED: histone deacetylase 9 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1069
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/384 (40%), Positives = 228/384 (59%), Gaps = 32/384 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 636 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 695
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 696 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 755
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 756 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 812
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 813 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGKG 870
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 871 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 930
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EA 347
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 931 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDVLHQ 990
Query: 348 YPFESTWRVIQAVRKKLSAFWPTL 371
P + +Q + + S +W +L
Sbjct: 991 SPNMNAVISLQKIIEIQSKYWKSL 1014
>gi|301759127|ref|XP_002915414.1| PREDICTED: histone deacetylase 9-like [Ailuropoda melanoleuca]
Length = 1111
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 255/471 (54%), Gaps = 43/471 (9%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 640 TGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 699
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 700 VHSEHHSLLYGTNPLDGQKLDPRTLLGDASQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 759
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A RVA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 760 MAVGCVIELASRVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 816
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 817 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 874
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + ++ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 875 YNINIAWTGGLDPPMGDIEYLEAFRTVVTPVAKEFDPDMVLVSAGFDALEGHAPPLGGYK 934
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EA 347
VT + + K+LM A G +VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 935 VTAKCFGHLTKQLMTLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQ 994
Query: 348 YPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEA 407
P + +Q + + S +W + + + P ++ + ++E V L +
Sbjct: 995 TPNMNAVVSLQKIIEIQSKYWKS--------VRMVTVPRGCSLAGTQLQEETETVSALAS 1046
Query: 408 VLQVALSKLKVDDGHAELGMATPWRSELSKVDVFYASFGSNMWKSRFLCYI 458
+ +D E M RS S++ + S + + F C +
Sbjct: 1047 LTVDVEQPFASEDNRYESNMGESLRSGTSRLII---SIREPLSRLSFTCLL 1094
>gi|79597237|ref|NP_850609.2| histone deacetylase 15 [Arabidopsis thaliana]
gi|332642590|gb|AEE76111.1| histone deacetylase 15 [Arabidopsis thaliana]
Length = 564
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/419 (42%), Positives = 235/419 (56%), Gaps = 37/419 (8%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + HPE P+R++AI L AG+ P RC+ +NA+E + L VHT
Sbjct: 154 FDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHT 213
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
HV+ + D+ + S S Y NE S+ AA LAAG ++A + G +
Sbjct: 214 SEHVDAV--------DTTSQLLYSYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVK 265
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ FA+VRPPGHHA AMGFCL+NN AVAA + K+LIVDWDVHHGN TQ
Sbjct: 266 NGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAK----KVLIVDWDVHHGNGTQ 321
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
++F ++ VL+ S+HRHE G FYP G +G G GY +NVPW G GD DY+
Sbjct: 322 EIFEQNKSVLYISLHRHEGGNFYPGT--GAADEVGSNGGEGYCVNVPWSCGGVGDKDYIF 379
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H++LP+A F PD +IISAGFDAA GDPLG C VTP GYS M + L D GK+++
Sbjct: 380 AFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVI 439
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV--IQAVRKKLS---AFWP 369
LEGGYNL SIS S A + VLL + P P +T V +Q V L+ FWP
Sbjct: 440 LEGGYNLRSISASATAVIKVLLGENP----ENELPIATTPSVAGLQTVLDVLNIQLEFWP 495
Query: 370 TLADELPTKLTSLKAPPAHMISSSDSEDED------TKVETLEAVLQVALS----KLKV 418
+LA L+ L+A S E E ++ T EA +Q++L K+KV
Sbjct: 496 SLAISYSKLLSELEARLIENKSEKSDEKEGCSGSDMVEMGTKEAFVQLSLGSYDFKIKV 554
>gi|324073114|ref|NP_001191204.1| histone deacetylase 7 isoform 1 [Mus musculus]
Length = 953
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 522 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 581
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 582 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 641
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 642 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 698
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 699 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 756
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 757 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 816
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 817 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 876
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 877 KPNLSAIRSLEAVVRVHRKYW 897
>gi|281339186|gb|EFB14770.1| hypothetical protein PANDA_003385 [Ailuropoda melanoleuca]
Length = 1049
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 216/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 628 TGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 687
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 688 VHSEHHSLLYGTNPLDGQKLDPRTLLGDASQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 747
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A RVA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 748 MAVGCVIELASRVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 804
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 805 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 862
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + ++ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 863 YNINIAWTGGLDPPMGDIEYLEAFRTVVTPVAKEFDPDMVLVSAGFDALEGHAPPLGGYK 922
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G +VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 923 VTAKCFGHLTKQLMTLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLA 976
>gi|301612142|ref|XP_002935586.1| PREDICTED: histone deacetylase 5-like [Xenopus (Silurana)
tropicalis]
Length = 1070
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/351 (40%), Positives = 213/351 (60%), Gaps = 29/351 (8%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI+++W++LQ G+ +C + ++A + +
Sbjct: 637 TGLVYDTLMLKHQCTCGDTNNHPEHAGRIQSVWSRLQETGLLGKCQRVRGRKATLDEIQT 696
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VHTE+H L S + +S+ ++ KL ++ G S A
Sbjct: 697 VHTEHHTLLYGTSPQSRHKLESKNILGTLSQKLYAVLPCGGIGVDSDTVWNELHSPPAVR 756
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
A GS+IE+ +VA GEL + FA++RPPGHHAE AMGFC +N+VA+AA L R ++
Sbjct: 757 TAVGSLIELVYKVAAGELKNGFAVIRPPGHHAEESVAMGFCFFNSVAIAAKLL---RQKM 813
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +ILIVDWD+HHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 814 NVGRILIVDWDIHHGNGTQQAFYNDPNILYISLHRYDDGNFFPGS--GSSDEVGAGHGTG 871
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
+N+N+ W G GDA+YLA + +++PVAK+F PD +++SAGFDA G PLGG
Sbjct: 872 FNVNIAWTGGVDPPVGDAEYLAAFRMVVMPVAKEFSPDFVLVSAGFDAVEGHQSPLGGYS 931
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPV 341
VT + + K+LM A G++VLALEGG++L +I ++ AC++ LL +P
Sbjct: 932 VTAKCFGHLTKQLMTLAGGQVVLALEGGHDLTAICDASEACVSALLGMEPT 982
>gi|26326835|dbj|BAC27161.1| unnamed protein product [Mus musculus]
Length = 953
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 522 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 581
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 582 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 641
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 642 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 698
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 699 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 756
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 757 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 816
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 817 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 876
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 877 KPNLSAIRSLEAVVRVHRKYW 897
>gi|397509319|ref|XP_003825075.1| PREDICTED: histone deacetylase 9 isoform 2 [Pan paniscus]
Length = 1066
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 633 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 692
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 693 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 752
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 753 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 809
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 867
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 868 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 927
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 928 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 981
>gi|358333752|dbj|GAA52223.1| histone deacetylase 6/10 [Clonorchis sinensis]
Length = 1165
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 215/344 (62%), Gaps = 16/344 (4%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF-DS 92
+PE P R A+ ++ + G+ RC+++ A A+D LL +H H+ +K ++ D+
Sbjct: 12 YPECPERGMAVRDRCDSCGLLSRCILMTADPAQDDILLYIHRNTHI--VKTAQTEYMSDN 69
Query: 93 RRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEA 152
R ++ L+S Y NE ++ AA LA GS+I+ E V GE+ +AF +VRPPGHHA DEA
Sbjct: 70 ERRSLSGGLDSAYFNEHTNMAARLAVGSLIQAVESVHRGEVRNAFCLVRPPGHHAMEDEA 129
Query: 153 MGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHE 212
GFC++NNVA+AA + L++ L N++LI+DWDVHHG +TQ F+ RVL+ S+HR++
Sbjct: 130 CGFCIFNNVALAAQYALDK---LEYNRVLILDWDVHHGQATQYSFYDSSRVLYISIHRYD 186
Query: 213 FGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR-CGDADYLAVWDHILLPVAKDFGPDI 271
TF+P+ + + IG G G GYNIN+P G GDA+YLA++ ++LPVA +F PD+
Sbjct: 187 EQTFWPSLRESNFDFIGSGRGRGYNINIPLNGGDDLGDAEYLAIFHRLILPVAYEFDPDL 246
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLAC 331
I++SAG+D A G PLG +VTP ++ KLM A+GKI+++LEGGY S++ S
Sbjct: 247 ILVSAGYDCAYGCPLGQLKVTPPLFAHFTHKLMGLAEGKIIVSLEGGYYHDSLAESAAHT 306
Query: 332 MNVLLED-----KPVAGSSEAYPFESTWRVIQAVR---KKLSAF 367
++ LL D +PV G A E+ + +R + LS F
Sbjct: 307 VSALLGDPMPSLEPV-GEVHASVLETIANCVSVLRFRWRSLSVF 349
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/447 (33%), Positives = 227/447 (50%), Gaps = 49/447 (10%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
++YD RM H + HPE PNRI+ + L G+ +RC + A+ A L VH
Sbjct: 424 IVYDSRMENHKNEEDPNHPEAPNRIRRTYELLDEYGLARRCKRVEARYATRTELCRVHAT 483
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
+V++I ++ + D ++++ NSI+ N + + A LAAGSV+ V + V G+ +
Sbjct: 484 AYVDMIAKTATLD-QTALDSLSNEENSIFFNRHTYDCARLAAGSVLAVVDEVCTGQSLNG 542
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
A+VRPPGHHA D+ MGFC +NNVA+ A + + G+ +I IVDWDVHHGN T+K+
Sbjct: 543 VALVRPPGHHALTDKCMGFCFFNNVAMGAK---HAQQVHGLERIAIVDWDVHHGNGTEKI 599
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
F DP VLF SVHR++ G +YP+ D T+ G GLG + V W D +Y+AV+
Sbjct: 600 FENDPSVLFISVHRYDEGRYYPSTADADPTVCGSEDGLGRTVQVAWNGRHVKDGEYIAVF 659
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA--------- 307
HI+LP+ +F P +I++SAGFDAA GD LGG V+P ++ + L+ A
Sbjct: 660 VHIILPILYEFRPQLILVSAGFDAARGDRLGGLGVSPECFAHLTHLLLTAAYLCPAKSVT 719
Query: 308 --------------------------QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPV 341
G ++LALEGGY+L + + ++ + LL D
Sbjct: 720 DDKTDSQVSTPVRQTRHRLAQQQRTFTGGLILALEGGYHLTATAEAMCHSVASLLGD--- 776
Query: 342 AGSSEAYPFESTWRVIQAVRKKLS---AFWPTLADELPTKLTSLKAPPAHMISSSD---- 394
A+ T + +A+R+ L +W ++ P + + + SS+
Sbjct: 777 CCPRLAFGLSPTEKGCRAIRRSLCTQETYWKSVQGYGPVRGQLITDESGRLSGSSEHHIG 836
Query: 395 SEDEDTKVETLEAVLQVALSKLKVDDG 421
S+ LE +Q L L + DG
Sbjct: 837 SQSALAFTGQLETDIQSRLEDLSLSDG 863
>gi|426355569|ref|XP_004045189.1| PREDICTED: histone deacetylase 9 isoform 4 [Gorilla gorilla
gorilla]
Length = 1066
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 633 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 692
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 693 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 752
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 753 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 809
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 867
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 868 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 927
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 928 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 981
>gi|392928255|ref|NP_001257279.1| Protein HDA-4, isoform b [Caenorhabditis elegans]
gi|373253944|emb|CCF23337.1| Protein HDA-4, isoform b [Caenorhabditis elegans]
Length = 816
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 215/379 (56%), Gaps = 25/379 (6%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL YD+ M +H G+ H EN RI++IW+KL G Q+C + AK+A + L
Sbjct: 409 TGLGYDQAMVRHECCCGNNASHVENGGRIQSIWSKLIEHGHVQKCEKVTAKKASLEQLQL 468
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL----------NSIYLNEGSSE-AAYLAAG 119
VH++ + + + + D+ + L + Y N+ S++ AA LAAG
Sbjct: 469 VHSQTYTTFFAVSPTACLKIDANSLPLKRFLQLPCGGIGVDSDTYFNDASTQTAARLAAG 528
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
++IE++ +VAEG L + FA +RPPGHHAE ++AMGFC +NNVAVA L + P K
Sbjct: 529 TLIELSSQVAEGRLKNGFACIRPPGHHAEHEQAMGFCFFNNVAVAVKVLQTKYPA-QCAK 587
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
I I+DWDVHHGN TQ F DP VL+ S+HRH+ G F+P G T +G+ G +N
Sbjct: 588 IAIIDWDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPGT--GSVTEVGKNDAKGLTVN 645
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYS 297
VP+ D +YLA W ++ PV F PD II+SAGFDA G P LGG VTP +
Sbjct: 646 VPFSGDVMRDPEYLAAWRTVIEPVMASFCPDFIIVSAGFDACHGHPNALGGYEVTPEMFG 705
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG-----SSEAYPFES 352
M K L+++A GK+VLALEGGY+L SIS + C+ L+ + AG + E+ P S
Sbjct: 706 YMTKSLLNYASGKVVLALEGGYDLKSISEAAQQCVQALIGESDDAGRLSSVALESLPNPS 765
Query: 353 TWRVIQAVRKKLSAFWPTL 371
+Q V ++WP L
Sbjct: 766 AVETLQKVIAIHKSYWPAL 784
>gi|119578358|gb|EAW57954.1| histone deacetylase 7A, isoform CRA_c [Homo sapiens]
Length = 480
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/431 (37%), Positives = 244/431 (56%), Gaps = 41/431 (9%)
Query: 16 GLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L SV
Sbjct: 49 GLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSV 108
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEGSSEAAYL 116
H+E HV L + ++A L ++I+ SS AA
Sbjct: 109 HSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARW 168
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L +
Sbjct: 169 AAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKA-- 226
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G+
Sbjct: 227 -SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGF 283
Query: 237 NINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRV 291
N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG V
Sbjct: 284 NVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHV 343
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY--- 348
+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S E +
Sbjct: 344 SAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQK 403
Query: 349 PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAV 408
P + R ++AV + S +W + +L S + +D E+ VE + A+
Sbjct: 404 PNLNAIRSLEAVIRVHSKYWGCM-----QRLASCPDSWVPRVPGADKEE----VEAVTAL 454
Query: 409 LQVALSKLKVD 419
+++ L D
Sbjct: 455 ASLSVGILAED 465
>gi|403295615|ref|XP_003938731.1| PREDICTED: histone deacetylase 9 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1066
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/384 (40%), Positives = 228/384 (59%), Gaps = 32/384 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 633 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 692
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 693 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 752
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 753 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 809
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGKG 867
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 868 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 927
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EA 347
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 928 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDVLHQ 987
Query: 348 YPFESTWRVIQAVRKKLSAFWPTL 371
P + +Q + + S +W +L
Sbjct: 988 SPNMNAVISLQKIIEIQSKYWKSL 1011
>gi|85057087|gb|AAI11736.1| HDAC9 protein, partial [Homo sapiens]
Length = 1024
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 591 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 650
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 651 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 710
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 711 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 767
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 768 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 825
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 826 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 885
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 886 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 939
>gi|366995711|ref|XP_003677619.1| hypothetical protein NCAS_0G03800 [Naumovozyma castellii CBS 4309]
gi|342303488|emb|CCC71267.1| hypothetical protein NCAS_0G03800 [Naumovozyma castellii CBS 4309]
Length = 726
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 202/345 (58%), Gaps = 20/345 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ GL YD RM H Y HPE+P RI I+ L G I
Sbjct: 77 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLIKDPTLSGIEDIGD 136
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ + ++A ++ +L VH++ H + I+ S+ + + K +S+Y N S +A
Sbjct: 137 LMLKIPVRDATEEEILEVHSKEHYDFIEKTSTMNREELL-KATEKGDSVYFNNDSFASAK 195
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L G IE + V EG + ++ A+VRPPGHHAEP A GFCL++NVA+AA +L PE
Sbjct: 196 LPVGGSIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAIAAKNILKNYPE- 254
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +I+I+DWD+HHGN TQK F+ D RVL+ S+HR E G +YP +G Y GEG G G
Sbjct: 255 SVRRIMILDWDIHHGNGTQKAFYDDDRVLYISLHRFELGKYYPGTINGQYDQTGEGKGEG 314
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N N+ W G GDA+Y+ ++ +++P+A++F PD++IIS+GFDAA GD +G C VTP
Sbjct: 315 FNCNITWPVGGVGDAEYIWAFEQVVMPMAREFQPDLVIISSGFDAADGDSIGQCHVTPSC 374
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL +I+ S L+ +L+ + P
Sbjct: 375 YGHMTHMLKSLAKGNLCVVLEGGYNLDAIARSALSVAKILIGEPP 419
>gi|354502070|ref|XP_003513110.1| PREDICTED: histone deacetylase 7-like isoform 1 [Cricetulus
griseus]
Length = 956
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 228/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ RC L ++A + L S
Sbjct: 525 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSRCECLRGRKASLEELQS 584
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + +A ++ ++I+ SS AA
Sbjct: 585 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAAR 644
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L +
Sbjct: 645 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQG--- 701
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 702 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGNGEG 759
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 760 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 819
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S E +
Sbjct: 820 VSAKCFGYMTQQLMTLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDLLSEEGWKQ 879
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P + R ++AV + +W
Sbjct: 880 KPNPNAIRSLEAVIRVHRKYW 900
>gi|194209700|ref|XP_001496799.2| PREDICTED: histone deacetylase 9-like isoform 2 [Equus caballus]
Length = 1065
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 216/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 632 TGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 691
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 692 VHSEHHSLLYGTNPLDGQKLDPRTLLGGASQKFFSSLPCGGIGVDSDTIWNELHSSGAAR 751
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A RVA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 752 MAVGCVIELASRVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 808
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 809 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 866
Query: 236 YNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + ++ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 867 YNINIAWTGGLDPPMGDIEYLEAFRTVVTPVAKEFDPDMVLVSAGFDALEGHAPPLGGYK 926
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G +VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 927 VTAKCFGHLTKQLMTLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLA 980
>gi|148672272|gb|EDL04219.1| histone deacetylase 7A, isoform CRA_a [Mus musculus]
Length = 969
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 538 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 597
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 598 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 657
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 658 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 714
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 715 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 772
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 773 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 832
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 833 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 892
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 893 KPNLSAIRSLEAVVRVHRKYW 913
>gi|324073170|ref|NP_001191208.1| histone deacetylase 7 isoform 6 [Mus musculus]
Length = 892
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 461 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 520
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 521 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 580
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 581 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 637
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 638 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 695
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 696 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 755
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 756 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 815
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 816 KPNLSAIRSLEAVVRVHRKYW 836
>gi|324073138|ref|NP_001191206.1| histone deacetylase 7 isoform 3 [Mus musculus]
gi|26336342|dbj|BAC31856.1| unnamed protein product [Mus musculus]
Length = 944
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 513 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 572
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 573 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 632
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 633 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 689
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 690 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 747
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 748 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 807
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 808 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 867
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 868 KPNLSAIRSLEAVVRVHRKYW 888
>gi|324073150|ref|NP_001191207.1| histone deacetylase 7 isoform 5 [Mus musculus]
Length = 916
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 485 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 544
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 545 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 604
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 605 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 661
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 662 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 719
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 720 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 779
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 780 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 839
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 840 KPNLSAIRSLEAVVRVHRKYW 860
>gi|351710667|gb|EHB13586.1| Histone deacetylase 7 [Heterocephalus glaber]
Length = 900
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/389 (40%), Positives = 234/389 (60%), Gaps = 42/389 (10%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 463 TGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 522
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H+ L +S + D+ + + +A ++ ++I+ SS AA
Sbjct: 523 VHSERHMLLYGTNPLSRLKLDNEKLSELLAQRMFVMLPCGGVGVDTDTIWNELHSSNAAR 582
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L +
Sbjct: 583 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQG--- 639
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
N+ILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 640 KANRILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEG 697
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NVPW G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 698 FNVNVPWAGGLDPPMGDPEYLAAFRMVVMPIAQEFSPDLVLVSAGFDAAEGHPAPLGGYH 757
Query: 291 VTP--------YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVA 342
V+ +GY M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +
Sbjct: 758 VSAKLGGHHRRFGY--MTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNTVDP 815
Query: 343 GSSEAY---PFESTWRVIQAVRKKLSAFW 368
S E++ P + R ++AV + S +W
Sbjct: 816 LSEESWKQKPNLNAIRSLEAVIRVHSKYW 844
>gi|26354072|dbj|BAC40666.1| unnamed protein product [Mus musculus]
Length = 916
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 485 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 544
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 545 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 604
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 605 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 661
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 662 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 719
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 720 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 779
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 780 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 839
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 840 KPNLSAIRSLEAVVRVHRKYW 860
>gi|301768737|ref|XP_002919807.1| PREDICTED: histone deacetylase 5-like [Ailuropoda melanoleuca]
Length = 1090
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 651 TGVVYDTFMLKHQCTCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 710
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 711 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 770
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L + +L
Sbjct: 771 MAVGCLVELAFKVASGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL---QQKL 827
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 828 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGMG 885
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 886 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 945
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 946 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 991
>gi|332864797|ref|XP_001151044.2| PREDICTED: histone deacetylase 9 isoform 8 [Pan troglodytes]
Length = 1066
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 633 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 692
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 693 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSRKFFSSLPCGGLGVDSDTIWNELHSSGAAR 752
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 753 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 809
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 867
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 868 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 927
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 928 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 981
>gi|40254548|ref|NP_062518.2| histone deacetylase 7 isoform 4 [Mus musculus]
gi|30913081|sp|Q8C2B3.2|HDAC7_MOUSE RecName: Full=Histone deacetylase 7; Short=HD7; AltName:
Full=Histone deacetylase 7A; Short=HD7a
gi|34785723|gb|AAH57332.1| Histone deacetylase 7 [Mus musculus]
Length = 938
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 507 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 566
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 567 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 626
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 627 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 683
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 684 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 741
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 742 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 801
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 802 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 861
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 862 KPNLSAIRSLEAVVRVHRKYW 882
>gi|119614112|gb|EAW93706.1| histone deacetylase 9, isoform CRA_f [Homo sapiens]
Length = 1030
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 652 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 711
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 712 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 771
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 772 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 828
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 829 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 886
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 887 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 946
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 947 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 1000
>gi|281354229|gb|EFB29813.1| hypothetical protein PANDA_008444 [Ailuropoda melanoleuca]
Length = 1134
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 213/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 695 TGVVYDTFMLKHQCTCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 754
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 755 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 814
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L +L
Sbjct: 815 MAVGCLVELAFKVASGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQ---KL 871
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 872 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGMG 929
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 930 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 989
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 990 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1035
>gi|355750970|gb|EHH55297.1| hypothetical protein EGM_04468 [Macaca fascicularis]
Length = 1084
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/427 (37%), Positives = 247/427 (57%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 654 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 713
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 714 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 771
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VAVAA LL +R
Sbjct: 772 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAK-LLQQR-- 828
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILI WDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 829 LSVSKILIAAWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGV 886
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 887 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGY 946
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E P+ +
Sbjct: 947 NLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQ 1006
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + R ++ V + S +W L T SL I + E+E+ + T
Sbjct: 1007 QRPNANAVRSMEKVMEIHSKYWRCLQRATSTAGRSL-------IEAQTCENEEAETVTAM 1059
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1060 ASLSVGV 1066
>gi|148672273|gb|EDL04220.1| histone deacetylase 7A, isoform CRA_b [Mus musculus]
Length = 908
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 477 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 536
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 537 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 596
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 597 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 653
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 654 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 711
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 712 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 771
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 772 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 831
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 832 KPNLSAIRSLEAVVRVHRKYW 852
>gi|148672275|gb|EDL04222.1| histone deacetylase 7A, isoform CRA_d [Mus musculus]
Length = 932
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 501 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 560
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 561 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 620
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 621 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 677
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 678 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 735
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 736 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 795
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 796 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 855
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 856 KPNLSAIRSLEAVVRVHRKYW 876
>gi|171688714|ref|XP_001909297.1| hypothetical protein [Podospora anserina S mat+]
gi|170944319|emb|CAP70429.1| unnamed protein product [Podospora anserina S mat+]
Length = 736
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 243/437 (55%), Gaps = 44/437 (10%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI------PQRCV 58
RR G+L YD+RM H D +HPE+P+RI+ I + G+ +
Sbjct: 65 RRKGILPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEVIMRIFKKHGLLFTGTDAELID 124
Query: 59 VLN-----------AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN----S 103
V+N A+EA ++ + +VH H N +K +S+K RD I++ ++ S
Sbjct: 125 VINNRPTSYMWRIPAREATEEEIRTVHRVEHFNWVKALSTKTTHELRD-ISAMMDQGRES 183
Query: 104 IYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAV 163
+Y+ + EA+ ++AG IE + V G + +AFA++RPPGHHAE D+ MGFCL+NNV +
Sbjct: 184 LYVGSMTYEASLISAGGAIETCKAVVTGTVKNAFAVIRPPGHHAEYDQPMGFCLFNNVPI 243
Query: 164 AASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD- 222
AA E P++ +++I+DWDVHHGN Q MF++DP +L+ S+H ++ G FYP D
Sbjct: 244 AAKVCQKEYPDI-CRRVMILDWDVHHGNGIQNMFYEDPNILYISLHVYKNGDFYPGKPDN 302
Query: 223 -----GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAG 277
G G G GLG NIN+ W + GD +Y+A + I++P+ +F PD++IISAG
Sbjct: 303 PMIPDGGMEQCGAGNGLGKNINIAWHDQGMGDGEYMAAFQKIVMPIGHEFNPDLVIISAG 362
Query: 278 FDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLE 337
FDAAAGD LG C V+P Y+ M LM A GK+ + LEGGYNL +IS S LA L+
Sbjct: 363 FDAAAGDELGACFVSPACYAHMTHMLMSLAGGKVAVCLEGGYNLIAISKSALAVAQTLMG 422
Query: 338 DKPVAGSSEAYPFESTWRVIQAVRKKLSAFW----PTLADELPTKLTSLKAPPAHMISSS 393
+ P E++ +V+ V+ + +W P + D T++T + H + S
Sbjct: 423 EPPPQMQIPRISKEAS-KVLAKVQAYQAPYWECMRPGIIDV--TEMTKNDSSRLHDVIRS 479
Query: 394 DSEDEDTKVETLEAVLQ 410
+++ +K L +Q
Sbjct: 480 SQKEKLSKYGMLPLYIQ 496
>gi|26353936|dbj|BAC40598.1| unnamed protein product [Mus musculus]
Length = 892
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 226/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 461 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 520
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 521 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 580
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 581 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHPTAMGFCFFNSVAIACRQLQQHG--- 637
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 638 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 695
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 696 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 755
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 756 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 815
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 816 KPNLSAIRSLEAVVRVHRKYW 836
>gi|119614110|gb|EAW93704.1| histone deacetylase 9, isoform CRA_d [Homo sapiens]
Length = 945
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 567 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 626
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 627 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 686
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 687 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 743
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 744 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 801
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 802 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 861
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 862 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 915
>gi|354479659|ref|XP_003502027.1| PREDICTED: histone deacetylase 9-like [Cricetulus griseus]
Length = 1079
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 213/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 646 TGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 705
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ DSR + S L ++I+ SS AA
Sbjct: 706 VHSEHHCLLYGTSPLDGQKLDSRTLLGDDSRKFFSSLPCGGLGVDSDTIWNELHSSGAAR 765
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 766 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYL---RDQL 822
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G G
Sbjct: 823 NISKILIVDLDVHHGNGTQQAFYADPSVLYISLHRYDEGNFFPGS--GAPNEVGVGLGEG 880
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + +++PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 881 YNINIAWTGGLDPPMGDVEYLEAFRTVVMPVAKEFDPDMVLVSAGFDALEGHIPPLGGYK 940
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++ LALEGG++L +I ++ AC+N LL
Sbjct: 941 VTAKCFGHLTRQLMTLAGGRVALALEGGHDLTAICDASEACINALL 986
>gi|444720909|gb|ELW61672.1| Histone deacetylase 9 [Tupaia chinensis]
Length = 1176
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/384 (39%), Positives = 228/384 (59%), Gaps = 32/384 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 664 TGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 723
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++++ SS AA
Sbjct: 724 VHSEHHSLLYGTNPLDRQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTVWNELHSSGAAR 783
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 784 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 840
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 841 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 898
Query: 236 YNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + ++ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 899 YNINIAWTGGLDPPMGDVEYLEAFRTVVRPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 958
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGS-SEA 347
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 959 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDIQHQ 1018
Query: 348 YPFESTWRVIQAVRKKLSAFWPTL 371
P + +Q + + S +W ++
Sbjct: 1019 TPNMNAIISLQKITEIQSKYWKSV 1042
>gi|345805637|ref|XP_548064.3| PREDICTED: histone deacetylase 5 isoform 1 [Canis lupus familiaris]
Length = 1125
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 686 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 745
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 746 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 805
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L + +L
Sbjct: 806 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL---QQKL 862
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 863 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGIG 920
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 921 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 980
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 981 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1026
>gi|301605191|ref|XP_002932227.1| PREDICTED: histone deacetylase 10-like [Xenopus (Silurana)
tropicalis]
Length = 671
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 212/359 (59%), Gaps = 6/359 (1%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+YDE M + D + E P R+ + + +LQ + +RC L +EA D+ +
Sbjct: 5 TALVYDEEMMSYKLLWDDQECSIEVPERLSSSYKRLQDYDLVKRCTQLPVREATDEEITL 64
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +++ ++K+ + + + I+ K +++ ++ S A L+ G +++ + V GE
Sbjct: 65 VHSSDYLEVVKSTQTMN-EKELEEISRKYTAVFFHQNSFRCAKLSLGGTLQLVDAVLSGE 123
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ D+ GFC++NNVA+AA + + + + +ILIVDWDVHHG
Sbjct: 124 VQNGMALVRPPGHHSQRDQGNGFCVFNNVAIAAEY---AKKKYKLERILIVDWDVHHGQG 180
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F +DP VL+FS HR+E TF+P + Y +G G G G+NIN+PW +ADY
Sbjct: 181 IQYIFEEDPSVLYFSWHRYEHKTFWPYLSESDYNAVGRGKGTGFNINLPWNKVGMSNADY 240
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+AV+ H+LLP+A +F P+++++SAG+D+A GDP G TP +S + LM+ A GK+
Sbjct: 241 IAVFFHVLLPLAFEFNPELVLVSAGYDSAIGDPEGRMCATPECFSHLTSMLMNLADGKLC 300
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL S++ SV + LL D + E P S IQ VR S +W L
Sbjct: 301 AVLEGGYNLRSLAESVCMTVRTLLGDPLPKLTGEMTPCHSALESIQNVRAAHSPYWKCL 359
>gi|405978897|ref|NP_001258315.1| histone deacetylase 9 isoform 1 [Mus musculus]
Length = 1088
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/350 (41%), Positives = 214/350 (61%), Gaps = 29/350 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 655 TGIAYDPLMLKHQCICGSSTTHPEHAGRIQSIWSRLQETGLLSKCERIQGRKASLEEIQL 714
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 715 VHSEHHSLLYGTSPLDGQKLDPRTLLGDDSRKFFSSLPCGGLGVDSDTIWNELHSSGAAR 774
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 775 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYL---RDQL 831
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 832 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGVGLGEG 889
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YN+N+ W G GD +YL + +++PVA++F PD++++SAGFDA G PLGG +
Sbjct: 890 YNVNIAWTGGLDPPMGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHTPPLGGYK 949
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
VT + + K+LM A G++ LALEGG++L +I ++ AC+N LL ++P
Sbjct: 950 VTAKCFGHLTKQLMTLANGRVALALEGGHDLTAICDASEACINALLGNEP 999
>gi|326921845|ref|XP_003207165.1| PREDICTED: histone deacetylase 9-like [Meleagris gallopavo]
Length = 1072
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 215/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+Y HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 637 TGVVYDSLMLKHQCMCGNYANHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQL 696
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E+H L ++ ++ D R+ ++ K+ ++++ S+ AA
Sbjct: 697 VHSEHHSLLYGTSPLNRQKLDPRKLLGLLSLKIVVSVPACGRGVDSDTVWNELHSAGAAR 756
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A RVA EL + FA+VRPPGHHAE AMGFC +N++A+ A +L R +L
Sbjct: 757 MAVGCVIELAARVASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYL---RDKL 813
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G GPG G
Sbjct: 814 NIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGS--GAPNEVGSGPGEG 871
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+NIN+ W G GD +YL + +++P A +F P+I+++SAGFDA G PLGG +
Sbjct: 872 FNINIAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYK 931
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + K+L+ A G++VLALEGG++L +I ++ AC+N LL
Sbjct: 932 VTAKCFGHLTKQLLKLADGRVVLALEGGHDLTAICDASEACINALL 977
>gi|116199645|ref|XP_001225634.1| hypothetical protein CHGG_07978 [Chaetomium globosum CBS 148.51]
gi|88179257|gb|EAQ86725.1| hypothetical protein CHGG_07978 [Chaetomium globosum CBS 148.51]
Length = 971
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 218/390 (55%), Gaps = 36/390 (9%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----------- 53
RR GLL YD+RM H D +HPE+P+RI+ I + AG+
Sbjct: 130 RRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEYIMKTFKKAGLVFTGSDADLVH 189
Query: 54 -----PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRD---RIASKLNSI 104
P + + + A+EA + + SVH H ++ +S K R+ R+ +S+
Sbjct: 190 IIQNEPTKYMWRIPAREATKEEICSVHHPGHFLWVEGLSRKSTQELRELSTRMDQGRDSL 249
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y+ + EA+ ++AG IE + V G + +AFA++RPPGHHAE D MGFCL+NNV +A
Sbjct: 250 YVGSMTYEASLISAGGAIETCKSVVAGTVKNAFAVIRPPGHHAEFDAPMGFCLFNNVPIA 309
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA----- 219
A + P+L KILI+DWDVHHGN Q +F+ DP +L+ S+H + G FYP
Sbjct: 310 AKICQADFPDL-CRKILILDWDVHHGNGIQNLFYDDPNILYISLHVYRGGEFYPGKPDNP 368
Query: 220 -NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
DG G GPGLG N+N+ W + GD +Y+A + +++P+A +F PD++IISAGF
Sbjct: 369 MTPDGGLEHCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKVVMPIAHEFNPDLVIISAGF 428
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
DAAAGD LG C V+P Y+ M LM A GK+ + LEGGY+L +IS S LA L+ +
Sbjct: 429 DAAAGDELGACFVSPDCYAHMTHMLMSLAGGKVAVCLEGGYDLEAISKSALAVAQTLMGE 488
Query: 339 KPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
P E+ +V+ V+ + +W
Sbjct: 489 PPPKMEVPMISREAA-KVLAKVQAYQAPYW 517
>gi|345790780|ref|XP_849514.2| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 4 [Canis lupus
familiaris]
Length = 1105
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 219/347 (63%), Gaps = 32/347 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 675 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 734
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 735 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 792
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 793 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 849
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++K LIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 850 LDVSKTLIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGPGV 907
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 908 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 967
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL
Sbjct: 968 NLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALL 1014
>gi|255541818|ref|XP_002511973.1| histone deacetylase hda1, putative [Ricinus communis]
gi|223549153|gb|EEF50642.1| histone deacetylase hda1, putative [Ricinus communis]
Length = 599
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 208/358 (58%), Gaps = 17/358 (4%)
Query: 19 YDERMCKHNTPDGDYHP--ENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + HP E P+R++AI L AGI P RC ++A+E + L VH+
Sbjct: 205 FDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPISAREITQQELQMVHS 264
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
H+ ++ +S F S Y NE S+ AA LAAG ++A + + +
Sbjct: 265 LEHIQAVE-FTSHIFSSYF------TPDTYANEHSAHAARLAAGLCADIASAIVSARVKN 317
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
FA+VRPPGHHA +AMGFCL+NN AVAA + K+LIVDWDVHHGN TQ+
Sbjct: 318 GFALVRPPGHHAGIRQAMGFCLHNNAAVAALAAQVAGAK----KVLIVDWDVHHGNGTQE 373
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
+F ++ VL+ S+HRHE G FYP G +G GY +NVPW G GD+DY+
Sbjct: 374 IFEQNKSVLYISLHRHEGGKFYPGT--GAADEVGSKGAEGYCVNVPWGRGGVGDSDYIFA 431
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLAL 315
+ H++LP+A +F PD IISAGFDAA GDPLG C VTP GY+ M L + GK+++ L
Sbjct: 432 FQHVVLPIAAEFAPDFTIISAGFDAARGDPLGCCDVTPAGYAQMTDMLYNLCGGKLLVIL 491
Query: 316 EGGYNLGSISNSVLACMNVLL-EDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
EGGYNL SIS+S A + VLL E+ P ++ + + V K FWP+L
Sbjct: 492 EGGYNLRSISSSATAVIKVLLGEEGTTCELGNIVPSKAGLQTVLEVLKIQMNFWPSLG 549
>gi|410082597|ref|XP_003958877.1| hypothetical protein KAFR_0H03320 [Kazachstania africana CBS 2517]
gi|372465466|emb|CCF59742.1| hypothetical protein KAFR_0H03320 [Kazachstania africana CBS 2517]
Length = 702
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 140/348 (40%), Positives = 203/348 (58%), Gaps = 20/348 (5%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV----- 59
I + GL YD RM H Y HPE+P RI I+ L G+ ++
Sbjct: 46 IPLKTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDTMLSGVDD 105
Query: 60 -------LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSE 112
+ +EA +L VH+ H+ +++ ++ + K +S+Y N S
Sbjct: 106 IGDIMLKIPVREATADEILEVHSREHLEFLESTTTMNREVLLKE-TEKGDSVYFNNDSYM 164
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + V EG++ +A A+VRPPGHH+EP+ + GFCL++NVAVAA +L
Sbjct: 165 SAKLSCGGAIEACKAVVEGKVKNALAVVRPPGHHSEPESSGGFCLFSNVAVAAKNILKNY 224
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
PE + KI+I+DWD+HHGN TQK F++D RVL+ S+HR E G +YP G Y GEG
Sbjct: 225 PE-SVRKIMILDWDIHHGNGTQKAFYQDERVLYVSLHRFEAGKYYPGTVQGQYDQCGEGK 283
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+N N+ W G GDA+Y+ ++ I++P+ ++F PD++IIS+GFDAA GD +G C VT
Sbjct: 284 GEGFNCNITWPTGGVGDAEYMWAFEQIVMPMGREFQPDLVIISSGFDAADGDVIGQCHVT 343
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
P Y M L A+G +V+ LEGGYNL SI+ S L+ L+ + P
Sbjct: 344 PSCYGHMTHMLKSLARGNLVVVLEGGYNLDSIAISALSVAKTLIGEPP 391
>gi|317689947|ref|NP_001186974.1| histone deacetylase 9 [Rattus norvegicus]
gi|316998103|dbj|BAJ52888.1| histone deacetylase 9 [Rattus norvegicus]
Length = 1068
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/350 (41%), Positives = 215/350 (61%), Gaps = 29/350 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 635 TGIAYDCLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 694
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 695 VHSEHHSLLYGTSPLDGQKLDPRTLLGDDSRKFFSSLPCGGLGVDSDTIWNELHSSGAAR 754
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 755 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYL---RDQL 811
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 812 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGVGLGEG 869
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YN+N+ W G GD +YL + +++PVA++F PD++++SAGFDA G PLGG +
Sbjct: 870 YNVNIAWTGGLDPPMGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHTPPLGGYK 929
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
VT + + K+LM A G++ LALEGG++L +I ++ AC+N LL ++P
Sbjct: 930 VTAKCFGHLTKQLMTLANGRVALALEGGHDLTAICDASEACINALLGNEP 979
>gi|403174834|ref|XP_003333752.2| hypothetical protein PGTG_15512 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171338|gb|EFP89333.2| hypothetical protein PGTG_15512 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 720
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 213/375 (56%), Gaps = 19/375 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY-----------HPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
R G+ + ++M KH PD + PE P+RI I + + +
Sbjct: 28 RTGICHSQQMLKHWKPDVQFDTIKDQDDENEEPERPSRIARIIAHVSKQKLTDNLEHIKI 87
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAGS 120
++A + ++ VH+E H I+ ++ +DR A ++L S+Y+N + + A L+ G
Sbjct: 88 RKATKEEIMLVHSEGHWKRIEETATMSLQDLKDRSAYFTRL-SLYVNGDTFDCARLSCGG 146
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
VIE+ V +G++ + FA+VRPPGHH+EP++ GFC++NN A++A +L P+ + K+
Sbjct: 147 VIEMCRAVMDGKIKNGFAVVRPPGHHSEPEDPSGFCVFNNAAISAKWLRTVYPD-KVKKV 205
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHR----HEFGTFYPANDDGFYTMIGEGPGLGY 236
L+VDWDVHHGN Q+ F+ D VL+ S+HR + FYP D G +G+G G G+
Sbjct: 206 LLVDWDVHHGNGIQRSFYYDSSVLYISIHRFLQENRSEYFYPGTDWGGSNRVGDGDGQGF 265
Query: 237 NINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY 296
N+N+PW G DADY+ + +++P+A +F PD +I+SAGFDAA DPLG C VTP G+
Sbjct: 266 NVNIPWPEGGMCDADYIYAFQRLVMPIAMEFDPDFVIVSAGFDAAKNDPLGECNVTPEGF 325
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV 356
+ M L A GK VLALEGGY+L S++ S C+ VL+ + P +
Sbjct: 326 AHMTHMLTSLASGKTVLALEGGYHLESLALSATECIKVLMGEAPPKLGCAMVASDVATET 385
Query: 357 IQAVRKKLSAFWPTL 371
+ K SAFW +L
Sbjct: 386 VDECLKIQSAFWKSL 400
>gi|405970030|gb|EKC34968.1| Histone deacetylase 4 [Crassostrea gigas]
Length = 851
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 221/392 (56%), Gaps = 34/392 (8%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G++ HPEN R+++IW++LQ G+ RC + ++ A + L S
Sbjct: 427 TGIAYDSIMQKHECTCGNHANHPENAARLQSIWSRLQETGLVNRCEKIKSRRATIEELQS 486
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEG--------------SSEAAYLAA 118
H+E H L R R+ + L G + A +AA
Sbjct: 487 CHSELHTILYGT-----NPMHRHRLLDHVQFCILPCGGIGVDSDTVWNEMHTYTAVRMAA 541
Query: 119 GSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN 178
G V E+A RVA +L + FA+VRPPGHHAE MGFC +N+VA+AA L + + +N
Sbjct: 542 GCVTELALRVANKDLKNGFAVVRPPGHHAEMSTPMGFCYFNSVAIAAKQL---KEKSKVN 598
Query: 179 KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNI 238
KILIVDWDVHHGNSTQ+ F+ DP VL+ S+HRH+ G F+P G T G G GLG+N+
Sbjct: 599 KILIVDWDVHHGNSTQQNFFNDPNVLYISIHRHDNGNFFPGT--GNPTDCGSGDGLGFNV 656
Query: 239 NVPWE---NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTP 293
N+ + N GDA+YLA + IL+P+AK+F PDI++ISAGFDAA G PLGG V+
Sbjct: 657 NIAFGGALNPPMGDAEYLAAFRTILMPIAKEFNPDIVLISAGFDAAIGHPPPLGGYNVSS 716
Query: 294 YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK-PVAGSSE--AYPF 350
+ M ++LM A G++VLALEGGY+L SI ++ C+ LL D+ P E P
Sbjct: 717 ACFGHMTRELMSLADGRLVLALEGGYDLPSICDATELCIKALLGDELPPVKEEELCRAPC 776
Query: 351 ESTWRVIQAVRKKLSAFWPTLADELPTKLTSL 382
+ ++ K + WP + L T SL
Sbjct: 777 KPGQETLEETIKIQAKHWPCVQKYLGTIHYSL 808
>gi|10440452|dbj|BAB15759.1| FLJ00062 protein [Homo sapiens]
Length = 484
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 243/431 (56%), Gaps = 41/431 (9%)
Query: 16 GLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L SV
Sbjct: 53 GLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSV 112
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEGSSEAAYL 116
H+E HV L + ++A L ++I+ SS AA
Sbjct: 113 HSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARW 172
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
AAG V ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L +
Sbjct: 173 AAGRVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKA-- 230
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G+
Sbjct: 231 -SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGF 287
Query: 237 NINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRV 291
N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG V
Sbjct: 288 NVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHV 347
Query: 292 TPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY--- 348
+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S E +
Sbjct: 348 SAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQK 407
Query: 349 PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAV 408
P + R ++AV + S +W + +L S + +D E+ VE + A+
Sbjct: 408 PNLNAIRSLEAVIRVHSKYWGCM-----QRLASCPDSWVPRVPGADKEE----VEAVTAL 458
Query: 409 LQVALSKLKVD 419
+++ L D
Sbjct: 459 ASLSVGILAED 469
>gi|50510619|dbj|BAD32295.1| mKIAA0744 protein [Mus musculus]
Length = 573
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 215/356 (60%), Gaps = 29/356 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
R G+ YD M KH G HPE+ RI++IW++LQ G+ +C + ++A
Sbjct: 134 RQPSSATGIAYDPLMLKHQCICGSSTTHPEHAGRIQSIWSRLQETGLLSKCERIQGRKAS 193
Query: 67 DKNLLSVHTENHVNLIKN--ISSKQFDSR------RDRIASKL---------NSIYLNEG 109
+ + VH+E+H L + ++ D R + S L ++I+
Sbjct: 194 LEEIQLVHSEHHSLLYGTSPLDGQKLDPRTLLGDDSRKFFSSLPCGGLGVDSDTIWNELH 253
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA +A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L
Sbjct: 254 SSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYL- 312
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
R +L I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G
Sbjct: 313 --RDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVG 368
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G GYN+N+ W G GD +YL + +++PVA++F PD++++SAGFDA G
Sbjct: 369 VGLGEGYNVNIAWTGGLDPPMGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHTP 428
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
PLGG +VT + + K+LM A G++ LALEGG++L +I ++ AC+N LL ++P
Sbjct: 429 PLGGYKVTAKCFGHLTKQLMTLANGRVALALEGGHDLTAICDASEACINALLGNEP 484
>gi|410897317|ref|XP_003962145.1| PREDICTED: histone deacetylase 4-like [Takifugu rubripes]
Length = 1066
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 158/428 (36%), Positives = 245/428 (57%), Gaps = 39/428 (9%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ C + ++A + L +
Sbjct: 643 TGLVYDSLMQKHQCMCGNTTIHPEHAGRIQSIWSRLQETGLRAHCECIRGRKASLEELQT 702
Query: 73 VHTENHVNLI-KNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSVI 122
+H+E HV L N ++ D + +L ++I+ SS AA LA GSV
Sbjct: 703 IHSEAHVLLYGTNPLRQKLDCSVSPMFVRLPCGGIGVDSDTIWNEVHSSTAARLAVGSVA 762
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L + KILI
Sbjct: 763 ELVFKVASGELKNGFAVVRPPGHHAEESAPMGFCYFNSVAIAAK-LLQQR--LSVRKILI 819
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G+G+N+N+ +
Sbjct: 820 VDWDVHHGNGTQQAFYADPGILYISLHRYDDGNFFPGS--GAPDEVGSGAGVGFNVNMAF 877
Query: 243 ENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGYS 297
G GD +YLA + +++P+A +F PD++++S+GFDA G PLGG ++T +
Sbjct: 878 TGGLEPPMGDVEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVDGHASPLGGYKLTAKCFG 937
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGS-SEAYPFESTW 354
+ ++LM A G++VLALEGG++L +I ++ AC++ LL E +P+ + P +
Sbjct: 938 YLTRQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELEPIPDKLMQQRPNANAV 997
Query: 355 RVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALS 414
R ++ V + +W +L T SL E + +T EA A++
Sbjct: 998 RSMEKVLEAHGKYWCSLQRSASTLGCSL--------------SEALQRDTEEAETVSAMA 1043
Query: 415 KLKVDDGH 422
L V + H
Sbjct: 1044 SLSVANKH 1051
>gi|443702528|gb|ELU00516.1| hypothetical protein CAPTEDRAFT_43373, partial [Capitella teleta]
Length = 334
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 216/342 (63%), Gaps = 30/342 (8%)
Query: 17 LLYDERMCKHNTP--DGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
+ YD M KH D HPENP R++AI +L G+ +C VL ++A + L + H
Sbjct: 1 IAYDGLMLKHQCQCQDNHLHPENPTRLQAIHQRLTDTGLIAQCEVLKCRKATAEELQTCH 60
Query: 75 TENHVNLIKNISSK-------QFDSRRDR-----IASKLNSIYLNEGSSEAAYLAAGSVI 122
+E +V++ + K F +R + I ++++ + +AA +A GSVI
Sbjct: 61 SEAYVHVFGSSPHKWDQQILDSFLTRFGKLPCGGIGVDSDTVWNEFYTPQAARMATGSVI 120
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E+A +VA GE+ + FA+VRPPGHHAE +AMGFC +N++AVA +L+ +L + +ILI
Sbjct: 121 ELAFQVARGEVKNGFALVRPPGHHAEDTQAMGFCYFNSIAVATKLILD---QLQLKRILI 177
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYP---ANDDGFYTMIGEGPGLGYNIN 239
+DWDVHHGNSTQ++F+ DPRVL+ S+HRH+ G F+P A DD G GLG+N+N
Sbjct: 178 LDWDVHHGNSTQQLFYTDPRVLYISLHRHDNGNFFPGTGAPDD-----CGIDRGLGFNVN 232
Query: 240 VPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPY 294
+ + GDA+YLA + +++PVA++F P+++++SAGFDAAAG PLGG V+P
Sbjct: 233 IAFSGHLQPPMGDAEYLAAFRTLIMPVAREFNPELVLVSAGFDAAAGHPAPLGGYVVSPE 292
Query: 295 GYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
+ VM K++M A GK+VL +EGGY L +I++S C+ LL
Sbjct: 293 CFGVMTKQMMSLANGKVVLVMEGGYELKAIADSAEVCLRTLL 334
>gi|395830858|ref|XP_003788531.1| PREDICTED: histone deacetylase 9 [Otolemur garnettii]
Length = 1065
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 217/354 (61%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 632 TGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 691
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ S+ AA
Sbjct: 692 VHSEHHSLLYGTNPLDGQKLDPRILLGGDSQKFFSSLPCGGLGVDSDTIWNELHSAGAAR 751
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 752 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 808
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 809 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 866
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 867 YNINIAWTGGLDPPMGDVEYLEAFRTIVNPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 926
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 927 VTAKCFGHLTKQLMSLAGGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 980
>gi|297734170|emb|CBI15417.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 215/368 (58%), Gaps = 21/368 (5%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + HPE P+R++AI L AGI P +C + A+E + L VH+
Sbjct: 297 FDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPGKCYPILAREITREELQMVHS 356
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNS--IYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HV ++ S RI S + Y NE S+ AA LAAG ++A + G
Sbjct: 357 LEHVETVELTS---------RILSSYFTPDTYANEHSALAARLAAGLCADLASAIFSGRA 407
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ FA+VRPPGHHA +AMGFCL+NN AVAA L ++ G ++LIVDWDVHHGN T
Sbjct: 408 KNGFALVRPPGHHAGVSQAMGFCLHNNAAVAA--LASQVS--GAKRVLIVDWDVHHGNGT 463
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q++F ++ VL+ S+HRHE G FYP G +G GY +N+PW G GD DY+
Sbjct: 464 QEIFEQNKSVLYISLHRHEGGNFYPGT--GASHEVGSMGAEGYCVNIPWSRGGVGDNDYI 521
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ H++LP+A +F PD IISAGFDAA GDPLG C VTP G++ M L + GK+++
Sbjct: 522 FAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGCCDVTPAGFAKMTDMLNVLSGGKLLV 581
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
LEGGYNL SIS+S A + VLL + P P +S R + V K FW TLA
Sbjct: 582 ILEGGYNLRSISSSATAVIKVLLGETPGCELDNCLPSKSGLRTVLEVLKIQMNFWSTLAS 641
Query: 374 ELPTKLTS 381
L TKL S
Sbjct: 642 TL-TKLES 648
>gi|301774206|ref|XP_002922520.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 4-like
[Ailuropoda melanoleuca]
Length = 1192
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 218/347 (62%), Gaps = 32/347 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 762 TGLVYDTLMLKHQCACGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 821
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 822 VHSEAHALLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAA 879
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 880 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 936
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L +++ LIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 937 LDVSRTLIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGPGV 994
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 995 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 1054
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL
Sbjct: 1055 NLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALL 1101
>gi|47220975|emb|CAF98204.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1155
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 158/399 (39%), Positives = 231/399 (57%), Gaps = 50/399 (12%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
VGL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 705 VGLVYDSLMQKHQCMCGNTNNHPEHAGRIQSIWSRLQETGLRAQCECIRGRKATLEELQT 764
Query: 73 VHTENHVNLI-KNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSVI 122
VH+E HV L N ++ D + +L ++I+ SS AA LA GSV
Sbjct: 765 VHSEAHVLLYGTNPLRQKLDCSITPMFVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVA 824
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E+ +VA EL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L INKILI
Sbjct: 825 ELVFKVATRELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LNINKILI 881
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G+N+NV +
Sbjct: 882 VDWDVHHGNGTQQAFYDDPSVLYLSIHRYDDGNFFPGS--GAPDEVGSGPGVGFNVNVAF 939
Query: 243 ENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTP---- 293
G GDA+YLA + +++P+A +F PDI+++S+GFDA G PLGG +T
Sbjct: 940 TGGLEPPMGDAEYLAAFRSVVMPIANEFAPDIVLVSSGFDAVEGHPPPLGGYTLTAKCEY 999
Query: 294 ---------------------YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACM 332
G+ + ++LM A G++VLALEGG++L +I ++ AC+
Sbjct: 1000 KNGKCAFRLKHRPDRTSGPLFAGFGYLTRQLMTLAGGRLVLALEGGHDLTAICDASEACL 1059
Query: 333 NVLL--EDKPVAGSS-EAYPFESTWRVIQAVRKKLSAFW 368
LL E P+ S E P + R ++ V + S +W
Sbjct: 1060 AALLGQELDPLPKSVLEQRPNANAVRSLEKVLEIHSKYW 1098
>gi|359490935|ref|XP_002274270.2| PREDICTED: histone deacetylase 15-like [Vitis vinifera]
Length = 621
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 215/368 (58%), Gaps = 21/368 (5%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + HPE P+R++AI L AGI P +C + A+E + L VH+
Sbjct: 221 FDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPGKCYPILAREITREELQMVHS 280
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNS--IYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HV ++ S RI S + Y NE S+ AA LAAG ++A + G
Sbjct: 281 LEHVETVELTS---------RILSSYFTPDTYANEHSALAARLAAGLCADLASAIFSGRA 331
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ FA+VRPPGHHA +AMGFCL+NN AVAA L ++ G ++LIVDWDVHHGN T
Sbjct: 332 KNGFALVRPPGHHAGVSQAMGFCLHNNAAVAA--LASQVS--GAKRVLIVDWDVHHGNGT 387
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q++F ++ VL+ S+HRHE G FYP G +G GY +N+PW G GD DY+
Sbjct: 388 QEIFEQNKSVLYISLHRHEGGNFYPGT--GASHEVGSMGAEGYCVNIPWSRGGVGDNDYI 445
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ H++LP+A +F PD IISAGFDAA GDPLG C VTP G++ M L + GK+++
Sbjct: 446 FAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGCCDVTPAGFAKMTDMLNVLSGGKLLV 505
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
LEGGYNL SIS+S A + VLL + P P +S R + V K FW TLA
Sbjct: 506 ILEGGYNLRSISSSATAVIKVLLGETPGCELDNCLPSKSGLRTVLEVLKIQMNFWSTLAS 565
Query: 374 ELPTKLTS 381
L TKL S
Sbjct: 566 TL-TKLES 572
>gi|6911184|gb|AAF31419.1|AF207749_1 histone deacetylase 7 [Mus musculus]
Length = 938
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 153/381 (40%), Positives = 225/381 (59%), Gaps = 32/381 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 507 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 566
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 567 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 626
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 627 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHG--- 683
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G
Sbjct: 684 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTASGEG 741
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 742 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 801
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 802 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 861
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 862 KPNLSAIRSLEAVVRVHRKYW 882
>gi|296488663|tpg|DAA30776.1| TPA: histone deacetylase 9-like [Bos taurus]
Length = 1135
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 215/354 (60%), Gaps = 31/354 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 702 TGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 761
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 762 VHSEHHSLLYGTNPLDGQKLDPRTLLGDSSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 821
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A RVA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 822 MAVGCVIELASRVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 878
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 879 NISKILIVDLDVHHGNGTQQAFYADPNILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 936
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + ++ PVA +F PD++++SAGFDA G PLGG +
Sbjct: 937 YNINIAWTGGLDPPMGDIEYLEAFRTVVKPVATEFDPDMVLVSAGFDALEGHAPPLGGYK 996
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G +VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 997 VTAKCFGHLTKQLMTLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLA 1050
>gi|26451468|dbj|BAC42833.1| putative histone deacetylase [Arabidopsis thaliana]
Length = 552
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/375 (44%), Positives = 218/375 (58%), Gaps = 27/375 (7%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + HPE P+R++AI L AG+ P RC+ +NA+E + L VHT
Sbjct: 154 FDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHT 213
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
HV+ + D+ + S S Y NE S+ AA LAAG ++A + G +
Sbjct: 214 SEHVDAV--------DTTSQLLYSYFTSDTYANEYSARAARLAAGLCTDLATDIFTGRVK 265
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ FA+VRPPGHHA AMGFCL+NN AVAA + K+LIVDWDVHHGN TQ
Sbjct: 266 NGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAK----KVLIVDWDVHHGNGTQ 321
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
++F ++ VL+ S+HRHE G FYP G +G G GY +NVPW G GD DY+
Sbjct: 322 EIFEQNKSVLYISLHRHEGGIFYPGT--GAADEVGSNGGEGYCVNVPWSCGGVGDKDYIF 379
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H++LP+A F PD +IISAGFDAA GDPLG C VTP GYS M + L D GK+++
Sbjct: 380 AFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVI 439
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV--IQAVRKKLS---AFWP 369
LEGGYNL SIS S A + VLL + P P +T V +Q V L+ FWP
Sbjct: 440 LEGGYNLRSISASATAVIKVLLGENP----ENELPIATTPSVAGLQTVLDVLNIQLEFWP 495
Query: 370 TLADELPTKLTSLKA 384
+LA L+ L+A
Sbjct: 496 SLAISYSKLLSELEA 510
>gi|426218529|ref|XP_004003498.1| PREDICTED: histone deacetylase 4 [Ovis aries]
Length = 1317
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 246/420 (58%), Gaps = 33/420 (7%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 749 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 808
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKL---------NSIYLNEGSSEAAYLAAGSV 121
VH+E H L ++ ++ DS + +L ++I+ SS AA LA G V
Sbjct: 809 VHSETHALLYGTNPLNRQKLDSSLASVFVRLPCVAVGVDSDTIWNEVHSSGAARLAVGCV 868
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R L ++K L
Sbjct: 869 VELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR--LSVSKTL 925
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
+VDWDVHHGN TQ+ F+ DPRVL+ S+HR++ G F+P + G + P +G+N+N+
Sbjct: 926 VVDWDVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFPGS--GAPDEVSGAPSVGFNVNMA 983
Query: 242 WENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGY 296
+ G GDA+YLA + +++P+A +F PD++++S+GFDA G PLGG ++ +
Sbjct: 984 FTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCF 1043
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-EAYPFEST 353
+ K+LM A G++VLALEGG++L +I ++ AC++ LL E P+ + P +
Sbjct: 1044 GYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANA 1103
Query: 354 WRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
R ++ V + S +W +L T SL + + E+E+ + T A L VA+
Sbjct: 1104 VRSMEKVIEIHSQYWRSLQRLASTAGYSL-------VEAQKCENEEAETVTAMASLSVAV 1156
>gi|327260798|ref|XP_003215220.1| PREDICTED: histone deacetylase 4-like [Anolis carolinensis]
Length = 1224
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/427 (37%), Positives = 246/427 (57%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 793 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRSKCECIRGRKATLEELQT 852
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NEGSS-EAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S AA
Sbjct: 853 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSVFVRLPCGGVGVDSDTIWNEVHSFSAA 910
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G VIE+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA++A LL +R
Sbjct: 911 RLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAISAK-LLQQR-- 967
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L +NKILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG
Sbjct: 968 LNVNKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGIGPGA 1025
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGC 289
G+N+N+ + G GD +Y+A + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 1026 GFNVNMAFTGGLDPPMGDTEYMAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPAPLGGY 1085
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVAGSS-E 346
++ + + K+LM A G+I+LALEGG++L +I ++ C++VLL E P+ +
Sbjct: 1086 NLSAKCFGYLTKQLMGLAGGRIILALEGGHDLTAICDASETCVSVLLGNELDPIPEKVLQ 1145
Query: 347 AYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
P + I+ V + S +W +L T SL + E+E+ + T
Sbjct: 1146 QRPNANAVHSIEKVIEIHSKYWHSLQRYASTVSYSL-------TEAQKCENEEAETVTAM 1198
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1199 ASLSVGV 1205
>gi|195397517|ref|XP_002057375.1| GJ17051 [Drosophila virilis]
gi|194147142|gb|EDW62861.1| GJ17051 [Drosophila virilis]
Length = 1138
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 202/367 (55%), Gaps = 29/367 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV YD +M +H HPE P RI+ I + + R L A+ A +
Sbjct: 542 RVCYAYDAQMLQHFNLHDATHPEQPMRIRQIHQMHEDYQLLDRMQQLAARAATTDEVCLA 601
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT HVN ++ + + + + ++ + NS+YL+ + E A LA+G+V++ + V G+
Sbjct: 602 HTRAHVNSVRRLLGRSVEELQ-QVGAGYNSVYLHPRTFECAILASGAVLQAVDSVLRGQS 660
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S VRPPGHHAEPD+ GFC++NN +ILIVDWDVHHGN T
Sbjct: 661 RSGICNVRPPGHHAEPDQPHGFCIFNN------------------RILIVDWDVHHGNGT 702
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +P+VL+ SVHR+E G F+P G Y ++G+ G G+N+N+PW GD +Y
Sbjct: 703 QHIFESNPKVLYISVHRYEHGAFFPKGPAGNYDVVGKNAGRGFNVNIPWNKKGMGDLEYA 762
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ ++LP+A +F P ++++SAGFDAA GDPLGGC+VTP GY + L A G+I++
Sbjct: 763 LAFQQLILPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGLFTHWLSALAGGRIIV 822
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAG---------SSEAYPFESTWRVIQAVRKKL 364
LEGGYN+ SIS ++ C LL D PV S F+S +Q ++
Sbjct: 823 CLEGGYNVNSISYAMTMCTKTLLGD-PVPTPQFATTAHQRSPTVAFQSCVETLQLCVEQQ 881
Query: 365 SAFWPTL 371
W +L
Sbjct: 882 RHHWKSL 888
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 188/324 (58%), Gaps = 3/324 (0%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+YDE M +H H E P R + + + +RC+ LN++ A +L +H
Sbjct: 114 TALIYDETMSEHCCLWDSTHQERPERFTRTLERCRELKLVERCLQLNSRLATKDEILKLH 173
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ H ++ S+ + ++S ++IY++ + + LA+GS IE+ E++ G+
Sbjct: 174 SMEHYERLEQTSAVHDAEAMEELSSHYDAIYIHPSTFRLSLLASGSTIELVEQLLLGKAQ 233
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA E G+C +NNVA+AA L+ + +ILI+D+DVHHG TQ
Sbjct: 234 NGMAIIRPPGHHAMKSEFNGYCYFNNVALAAQHALDAH---QLQRILIIDYDVHHGQGTQ 290
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+ F+ D RVL+FS+HR+E G+F+P + Y IG G G GYN NVP G+ DY+A
Sbjct: 291 RFFYNDSRVLYFSIHRYEHGSFWPNLQESDYHAIGAGSGTGYNFNVPLNAKGLGNGDYMA 350
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
++ +LLPVA ++ P++II+SAG+DAA G P G VTP Y +L L+ A ++ +
Sbjct: 351 IFQQLLLPVAMEYQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLHLANCRVAVV 410
Query: 315 LEGGYNLGSISNSVLACMNVLLED 338
LEGGY + S+S + LL D
Sbjct: 411 LEGGYCVESLSEGAALTLRALLGD 434
>gi|18401915|ref|NP_566612.1| histone deacetylase 15 [Arabidopsis thaliana]
gi|357528804|sp|Q8GXJ1.2|HDA15_ARATH RecName: Full=Histone deacetylase 15
gi|332642589|gb|AEE76110.1| histone deacetylase 15 [Arabidopsis thaliana]
Length = 552
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/375 (44%), Positives = 218/375 (58%), Gaps = 27/375 (7%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + HPE P+R++AI L AG+ P RC+ +NA+E + L VHT
Sbjct: 154 FDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHT 213
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
HV+ + D+ + S S Y NE S+ AA LAAG ++A + G +
Sbjct: 214 SEHVDAV--------DTTSQLLYSYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVK 265
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ FA+VRPPGHHA AMGFCL+NN AVAA + K+LIVDWDVHHGN TQ
Sbjct: 266 NGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAK----KVLIVDWDVHHGNGTQ 321
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
++F ++ VL+ S+HRHE G FYP G +G G GY +NVPW G GD DY+
Sbjct: 322 EIFEQNKSVLYISLHRHEGGNFYPGT--GAADEVGSNGGEGYCVNVPWSCGGVGDKDYIF 379
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H++LP+A F PD +IISAGFDAA GDPLG C VTP GYS M + L D GK+++
Sbjct: 380 AFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVI 439
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV--IQAVRKKLS---AFWP 369
LEGGYNL SIS S A + VLL + P P +T V +Q V L+ FWP
Sbjct: 440 LEGGYNLRSISASATAVIKVLLGENP----ENELPIATTPSVAGLQTVLDVLNIQLEFWP 495
Query: 370 TLADELPTKLTSLKA 384
+LA L+ L+A
Sbjct: 496 SLAISYSKLLSELEA 510
>gi|327273189|ref|XP_003221363.1| PREDICTED: histone deacetylase 10-like [Anolis carolinensis]
Length = 594
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 215/370 (58%), Gaps = 6/370 (1%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+YD+ M H D E P R+ + + +LQ + +RC + +EA + ++
Sbjct: 5 TALIYDDEMRNHKLIWDDPICEIEVPERLSSCYEQLQGYNLIERCTSVPVREATEDEIML 64
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +++ ++K+ + + R +I++ +++Y + + A LAAG+ +E+ + V G
Sbjct: 65 VHSSDYLEIVKSTEKMKQEELR-KISADFDAVYFHPTTYLCAKLAAGATLELVDAVMLGR 123
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ A+VRPPGHH++ + A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 124 TRNGMALVRPPGHHSQRNAANGFCIFNNVAIAAKY---AQKKYGLERILIVDWDVHHGQG 180
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F +DP VL+FS HR E F+P+ + Y +G+G G G+NINVPW G+ADY
Sbjct: 181 IQYIFDEDPSVLYFSWHRFEHQQFWPSLKESDYDAVGQGKGKGFNINVPWNKVGMGNADY 240
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+AV+ H+LLP+ +F P+++++SAGFD+ GDP G TP ++ + LM A+GK+
Sbjct: 241 VAVFLHVLLPLVFEFDPELVLVSAGFDSGIGDPEGQMCATPECFAHLTHFLMHLAKGKLC 300
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
L LEGGY+L S+S SV + LL D S E P S I VR +W L
Sbjct: 301 LVLEGGYHLRSLSESVCMTIKTLLGDPLPRLSGEMAPCLSALESIHNVRAAHKTYWKCLL 360
Query: 373 DELPTKLTSL 382
E T L L
Sbjct: 361 HEGTTPLQDL 370
>gi|188482316|gb|ACD50314.1| histone deacetylase RPD3/HDA1 class II [Hordeum vulgare]
gi|326522787|dbj|BAJ88439.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 614
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 212/359 (59%), Gaps = 22/359 (6%)
Query: 19 YDERMCKHNTPDG--DYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + + HPE PNR++AI L AAGI P +C ++ +E + L+ VHT
Sbjct: 207 FDERMLLHSEMETKPNPHPERPNRLRAIAASLAAAGIFPSKCALVPPREITKEELVMVHT 266
Query: 76 ENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+HV + KN+ F S Y N S+ AA LAAG ++A + G
Sbjct: 267 SDHVESVEQTKNMLYSYFTS----------DTYANGHSACAAKLAAGLCADLASLIVSGR 316
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + FA+VRPPGHHA +AMGFCL+NN AVAA K+LIVDWDVHHGN
Sbjct: 317 VRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAQKAG----AKKVLIVDWDVHHGNG 372
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F + +L+ S+HRHE G+FYP G +G G G+++N+PW G GD DY
Sbjct: 373 TQEIFEGNKSILYISLHRHEDGSFYPGT--GAADEVGVLDGKGFSVNIPWSCGGVGDNDY 430
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ + H++LP+A +F PDI IISAGFDAA GDPLG C VTP GYS M L ++GK++
Sbjct: 431 IFAFQHVVLPIATEFAPDITIISAGFDAARGDPLGCCDVTPAGYSQMTSMLTACSEGKLL 490
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+ LEGGYNL SIS+S + VLL D P G+ A P + + + V +WP L
Sbjct: 491 VILEGGYNLRSISSSATEVVKVLLADGPSYGTDAAAPSKEGMQTVLHVLDIQRKYWPVL 549
>gi|18376165|emb|CAD21239.1| related to histone deacetylase A [Neurospora crassa]
Length = 747
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 220/395 (55%), Gaps = 37/395 (9%)
Query: 11 IKRR----VGLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI---------- 53
+KRR G YD+RM H D +HPE+P+RI+ I + G+
Sbjct: 64 LKRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEHIMRIFKKEGLVFTGDDEDLK 123
Query: 54 ------PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---- 102
P+R + + A+ A + + VH H ++++S K R R+++ ++
Sbjct: 124 KVIRTDPRRYMWRIPARHATKEEICIVHHPEHFRWVEDLSRKPTSELR-RLSTIMDQGRD 182
Query: 103 SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVA 162
S+Y+ + EAA ++AG IE + V G + +AFA++RPPGHHAE D MGFCL+NNV
Sbjct: 183 SLYVGSMTFEAALISAGGAIETCKSVVVGNVKNAFAVIRPPGHHAEFDAPMGFCLFNNVP 242
Query: 163 VAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA--- 219
+AA E PE+ KILI+DWDVHHGN Q MF+ DP +L+ S+H + G+FYP
Sbjct: 243 IAAKICQTEYPEI-CRKILILDWDVHHGNGIQNMFYDDPNILYISLHVYMNGSFYPGKPD 301
Query: 220 ---NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISA 276
DG G GPGLG N+N+ W + GD +Y+A + I++P+A +F PD++IISA
Sbjct: 302 NPMTPDGSIENCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFDPDLVIISA 361
Query: 277 GFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
GFDAA GD LG C V+P Y+ M LM A GK+ + LEGGYNL +IS S LA L+
Sbjct: 362 GFDAADGDELGACFVSPACYAHMTHMLMSLANGKVAVCLEGGYNLAAISKSALAVARTLM 421
Query: 337 EDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+ P E+ RV+ V+ + +W +
Sbjct: 422 GEPPPKMDLPKINKEAA-RVLAKVQAYQAPYWECM 455
>gi|255075841|ref|XP_002501595.1| histone deacetylase [Micromonas sp. RCC299]
gi|226516859|gb|ACO62853.1| histone deacetylase [Micromonas sp. RCC299]
Length = 659
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 207/360 (57%), Gaps = 11/360 (3%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VGL Y + M H P +H E P R +++ G+ ++C ++ A+EA D+ LL+ H
Sbjct: 284 VGLCYSDVMELHEGPS--HHFERPARHAVTVARMRKDGLEEKCDLIAAREATDEELLTCH 341
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ H+ + N FD D + IY E + A AAGS + VA G +
Sbjct: 342 SREHLEYVANA----FDRTSDEKVQGVGDIYWTEHTERCARTAAGSACAATDAVASGTHH 397
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
AFA+VRPPGHHAE AMGFC YNN AVAA L P +N++L++DWDVHHGN Q
Sbjct: 398 RAFAVVRPPGHHAECARAMGFCFYNNTAVAARAALTAHPH--VNRVLLLDWDVHHGNGIQ 455
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+ ++D RV++ S+HR+ G FYP G G G G GYN+NVPW GDADYLA
Sbjct: 456 DVLYRDDRVMYVSLHRYGDG-FYPGT--GAMEETGAGEGAGYNVNVPWTEKGLGDADYLA 512
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+D ++ P+AK F PD++II+AGFDAA GDPLGG +VT GY++M ++L+ A GK V A
Sbjct: 513 AFDLVIDPIAKSFDPDLVIIAAGFDAAEGDPLGGMKVTDQGYALMTERLVSLAGGKCVAA 572
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGY L + +++ A + +L SS P ST + + + WP LA E
Sbjct: 573 LEGGYGLTATASAAAATLGAMLGYATPPLSSRRRPKRSTVETLGKIIEVHKERWPVLASE 632
>gi|119182795|ref|XP_001242509.1| hypothetical protein CIMG_06405 [Coccidioides immitis RS]
Length = 724
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 209/354 (59%), Gaps = 26/354 (7%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-----------IPQRCVVLNA 62
G+ YD RM H P D HPE+P RI I+ +L AG + Q + + A
Sbjct: 120 GVCYDIRMRYHCEVKPTLDVHPEDPRRIYYIYKELCKAGLVDDPDASRPLVSQPLLRIPA 179
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAGS 120
++A + + +H H + + +S+K S + IA S +SIY N + +A LA G
Sbjct: 180 RDATHEEISLIHDSEHYDFV--LSTKDM-SEDELIALESTRDSIYFNTLTFTSAILACGG 236
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
IE + V G++ +A A++RPPGHHAE +AMGFCL+NNV+VAA + + + KI
Sbjct: 237 AIETCKAVVSGKVKNAIAVIRPPGHHAEQCQAMGFCLFNNVSVAAR-VCQKTFKDKCRKI 295
Query: 181 LIVDWDVHH---GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
+IVDWDVHH GN Q F+ DP VL+ S+H ++ G FYP + G + GEG GLG N
Sbjct: 296 MIVDWDVHHDLLGNGVQNAFYDDPNVLYISLHVYKDGAFYPGGEQGNWDHCGEGNGLGKN 355
Query: 238 INVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
+N+PW GD DYL + +++P+ +F PD++IISAGFDAAAGD LGGC VTP Y+
Sbjct: 356 VNIPWPTQGMGDGDYLYAFQEVIMPIGYEFNPDLVIISAGFDAAAGDELGGCFVTPPCYA 415
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPV----AGSSEA 347
M LM+ A GK+ + LEGGYN SIS S LA L+ + P AG+S+A
Sbjct: 416 HMTSMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEPPDRLIGAGASQA 469
>gi|427781125|gb|JAA56014.1| Putative histone deacetylase domain protein [Rhipicephalus
pulchellus]
Length = 471
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 225/422 (53%), Gaps = 31/422 (7%)
Query: 20 DERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHV 79
D M KH P + PE P R++ LQ G+ R ++L ++ A D+ L VHT++H+
Sbjct: 9 DNAMLKHWNPLKRWMPERPKRLQVAHQLLQTKGLLDRALILESRYATDEELGLVHTKDHI 68
Query: 80 NLIKNISSKQFDS------RRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
LI+ + R D + + + + +++ A LA G +++ + V G+
Sbjct: 69 ELIRATEKMSLEEVTLENHRLDPVTT------ICQETNQCARLACGCLLQAVDAVVSGKC 122
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ A++RPPGHH+ D GFC++NN AVAA + + G+ +ILI DWDVHHGN T
Sbjct: 123 RNGVALIRPPGHHSAADTVSGFCIFNNAAVAARYAMQR---YGLKRILIFDWDVHHGNGT 179
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F+ VL+ S+HR+ +P + T +G G G GYNIN+PW DADYL
Sbjct: 180 QDIFYDSNSVLYISLHRYSKEKIFPKTEISDATYVGRGDGRGYNINIPWTKPAITDADYL 239
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+++PVA +F P+++I+SAGFD+A GD LG C VTP GY M L + A G++++
Sbjct: 240 TAMYQLVMPVASEFDPELVIVSAGFDSAKGDILGDCCVTPAGYQHMTSLLKNLAHGRVII 299
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
LEGGYN+ ++ S+ ACM L+ D P + P S + I + +S +W L +
Sbjct: 300 QLEGGYNVDVVAESLAACMATLMGD-PCDSVTNMQPSASAMQSIARAKAAVSPYWKCLTE 358
Query: 374 ELPT-------------KLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQ-VALSKLKVD 419
E PT ++ L P MISS S+ + L+ V + + L+ +V
Sbjct: 359 E-PTPIVVEPERDIETWQIPVLSCPHGKMISSLPSQGLSADLRNLDNVNKWICLTCFQVL 417
Query: 420 DG 421
+G
Sbjct: 418 EG 419
>gi|302307263|ref|NP_983880.2| ADL216Cp [Ashbya gossypii ATCC 10895]
gi|299788916|gb|AAS51704.2| ADL216Cp [Ashbya gossypii ATCC 10895]
gi|374107093|gb|AEY96001.1| FADL216Cp [Ashbya gossypii FDAG1]
Length = 702
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 202/345 (58%), Gaps = 20/345 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL YD RM H Y HPE+P RI I+ L G+ + +
Sbjct: 51 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLIEDPTLSGIDEIGE 110
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ +EA ++ +L+VH++ HV +K ++ + + +S+Y N S +A
Sbjct: 111 LMQKIPVREATEEEILTVHSKEHVEFLKTTNTMDREQLLKETEAG-DSVYYNNDSLISAR 169
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G IE + V EG + +A A+VRPPGHHAEP A GFCL++NVAVAA +L PE
Sbjct: 170 LSCGGAIEACKAVVEGRVKNAMAVVRPPGHHAEPGVAGGFCLFSNVAVAAQNILKNYPE- 228
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +++I+DWD+HHGN TQK F+ D RVL+ S+HR+E G +YP G Y G+G G G
Sbjct: 229 SVRRVMILDWDIHHGNGTQKAFYGDNRVLYVSLHRYELGKYYPGTSYGNYDQCGDGKGEG 288
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N N+PW GDA+Y+ ++ +++P+ ++F PD++IIS+GFDAA GD +G C V+P
Sbjct: 289 FNCNIPWSCSGVGDAEYMWAFEQVVIPMGREFQPDLVIISSGFDAADGDTIGQCHVSPAC 348
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y + L A+G + + LEGGYNL SI+ S L VL+ + P
Sbjct: 349 YGHLTHMLKSLARGNMCVVLEGGYNLDSIAKSALGVAKVLIGEPP 393
>gi|156846508|ref|XP_001646141.1| hypothetical protein Kpol_1039p32 [Vanderwaltozyma polyspora DSM
70294]
gi|156116814|gb|EDO18283.1| hypothetical protein Kpol_1039p32 [Vanderwaltozyma polyspora DSM
70294]
Length = 659
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 215/394 (54%), Gaps = 27/394 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL YD RM H Y HPE+P RI I+ L G+ + +
Sbjct: 11 KTGLCYDVRMRYHAKIYTSYYEYIDPHPEDPRRIYRIYKILAENGLIRDPALSGIDDIGD 70
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL---NSIYLNEGSSE 112
+ +EA + +L VH + + ++ RD + SK +S+Y N S
Sbjct: 71 LMCKIPVREATSEEILEVHPKEQLEYLEKTQYLN----RDELLSKTELGDSVYFNNDSYF 126
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
+A L+ G IE + + +G++ ++ AIVRPPGHH+EP+ A GFCL++NVAVA +L
Sbjct: 127 SAKLSCGGAIEACKAIVDGKVKNSLAIVRPPGHHSEPEVAGGFCLFSNVAVATKNILKNY 186
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
P+ + K++IVDWD+HHGN TQK F+ D RVL+ S+HR E G +YP G Y +GEG
Sbjct: 187 PD-KVKKVMIVDWDIHHGNGTQKAFYNDDRVLYVSLHRFELGKYYPGTIHGQYDQVGEGK 245
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G G+N N+PW G GDA+Y+ ++ I++P+ ++F PD++I+S+GFDAA GD +G C VT
Sbjct: 246 GEGFNCNIPWSVGGIGDAEYIWAFEQIVMPMGREFRPDLVIVSSGFDAADGDTIGKCHVT 305
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP-VAGSSEAYPFE 351
P Y M L A GK+ + LEGGYNL +I+ S LA VL+ + P + + P
Sbjct: 306 PSCYGHMTHMLKSLANGKLCVVLEGGYNLDAIARSALAVAKVLIGEPPDELPAPDKDPKP 365
Query: 352 STWRVIQAVRKKLSAFWPTLADELPTKLTSLKAP 385
+I V S +W ++ K P
Sbjct: 366 EAIEMIDRVIDLKSKYWKCFKRQITNSNCEYKGP 399
>gi|15239507|ref|NP_200913.1| histone deacetylase-like protein [Arabidopsis thaliana]
gi|9759452|dbj|BAB10368.1| unnamed protein product [Arabidopsis thaliana]
gi|332010033|gb|AED97416.1| histone deacetylase-like protein [Arabidopsis thaliana]
Length = 252
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 159/219 (72%)
Query: 428 ATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTF 487
+T WR +L+KVDV+YAS+GSNMWK RF+CYI+GGQ EGM K C GS D++PPKEI+WKTF
Sbjct: 34 STSWRIDLAKVDVWYASYGSNMWKPRFICYIQGGQAEGMIKACVGSMDKSPPKEIMWKTF 93
Query: 488 PHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYRITLEQFNDVLLQENVYSDDVSS 547
PH L FG ++S WG GGVA+ NP + + ++CLYRITLEQFND+L QEN + D
Sbjct: 94 PHRLLFGRETSMFWGVGGVAYTNPLTNLNDQTHMCLYRITLEQFNDLLFQENELNVDSDY 153
Query: 548 PLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHGIPILTMTCSLSAVGKFKSGEFP 607
P FD L + ++SL+ + Y NVV LGKE IPILT+TC+LS V KFKSGE P
Sbjct: 154 PFFDLAALRLAEKEGSISLQTASDSLYGNVVCLGKEGVIPILTLTCTLSVVEKFKSGEIP 213
Query: 608 LRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEASTKRL 646
+R PA Y NTLI+GLV+G + S EEA+AYI A++K L
Sbjct: 214 IRPPAKAYANTLIRGLVKGGRFSIEEAEAYIDNAASKPL 252
>gi|164427989|ref|XP_956974.2| hypothetical protein NCU01525 [Neurospora crassa OR74A]
gi|157071964|gb|EAA27738.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 738
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 220/395 (55%), Gaps = 37/395 (9%)
Query: 11 IKRR----VGLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI---------- 53
+KRR G YD+RM H D +HPE+P+RI+ I + G+
Sbjct: 64 LKRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEHIMRIFKKEGLVFTGDDEDLK 123
Query: 54 ------PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---- 102
P+R + + A+ A + + VH H ++++S K R R+++ ++
Sbjct: 124 KVIRTDPRRYMWRIPARHATKEEICIVHHPEHFRWVEDLSRKPTSELR-RLSTIMDQGRD 182
Query: 103 SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVA 162
S+Y+ + EAA ++AG IE + V G + +AFA++RPPGHHAE D MGFCL+NNV
Sbjct: 183 SLYVGSMTFEAALISAGGAIETCKSVVVGNVKNAFAVIRPPGHHAEFDAPMGFCLFNNVP 242
Query: 163 VAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA--- 219
+AA E PE+ KILI+DWDVHHGN Q MF+ DP +L+ S+H + G+FYP
Sbjct: 243 IAAKICQTEYPEI-CRKILILDWDVHHGNGIQNMFYDDPNILYISLHVYMNGSFYPGKPD 301
Query: 220 ---NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISA 276
DG G GPGLG N+N+ W + GD +Y+A + I++P+A +F PD++IISA
Sbjct: 302 NPMTPDGSIENCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFDPDLVIISA 361
Query: 277 GFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
GFDAA GD LG C V+P Y+ M LM A GK+ + LEGGYNL +IS S LA L+
Sbjct: 362 GFDAADGDELGACFVSPACYAHMTHMLMSLANGKVAVCLEGGYNLAAISKSALAVARTLM 421
Query: 337 EDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+ P E+ RV+ V+ + +W +
Sbjct: 422 GEPPPKMDLPKINKEAA-RVLAKVQAYQAPYWECM 455
>gi|310798036|gb|EFQ32929.1| histone deacetylase domain-containing protein [Glomerella
graminicola M1.001]
Length = 745
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/400 (37%), Positives = 218/400 (54%), Gaps = 50/400 (12%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----PQRCVV- 59
RR GLL YD+RM H D +HPE+P RI+ I+ + AG+ P+ V
Sbjct: 66 RRRGLLPTACCYDDRMKLHVNADFGTTPHHPEDPRRIEEIYKAFKRAGLVYTGPESKVAD 125
Query: 60 ------------LNAKEAKDKNLLSVHTENHVNLIKNIS----------SKQFDSRRDRI 97
+ +EA + +L+ HT H N ++ +S S+Q+D R
Sbjct: 126 VMRDTPTKYMWRIGTREATKEEILTTHTPLHYNWVEGLSKMDYAELRETSRQYDQGR--- 182
Query: 98 ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCL 157
S+Y+ + AA L+ G I+ + V EG + +AFA++RPPGHHAE D+ +GFC
Sbjct: 183 ----ASLYVGSLTFTAALLSCGGAIDTCKHVVEGNVKNAFAVIRPPGHHAEYDQPLGFCF 238
Query: 158 YNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFY 217
+NNV VA E P+ K+LI+DWDVHHGN Q +F+ DP VL+ S+H ++ G FY
Sbjct: 239 FNNVPVAVKICQQEYPK-DCRKVLILDWDVHHGNGIQNIFYDDPNVLYISLHVYQNGIFY 297
Query: 218 PANDD------GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
P D G G GPGLG N+N+ W + GD +Y+A + I++P+A +F PD+
Sbjct: 298 PGKPDNQEIPDGGIEHCGTGPGLGKNVNIGWHDQGMGDGEYMAAFQKIIMPIANEFSPDL 357
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLAC 331
++ISAGFDAAAGD LGGC VT Y+ M LM A GK+ + LEGGYNL +IS S +A
Sbjct: 358 VVISAGFDAAAGDELGGCFVTATCYAHMTHMLMSLADGKVAVCLEGGYNLQAISTSAVAV 417
Query: 332 MNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
L+ + P ++ RV+ V+ + +W +
Sbjct: 418 ARTLMGEPPPKMDIPMLNKDAA-RVLAKVQSYQAPYWECM 456
>gi|395753942|ref|XP_002831670.2| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 6 [Pongo
abelii]
Length = 1234
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/348 (41%), Positives = 202/348 (58%), Gaps = 37/348 (10%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 476 LQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 535
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 536 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 593
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 594 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGRALRILIVDW 647
Query: 186 DVHHGNSTQKMFWKDPR-------VLFFSVHRHEFGTFYP--------------ANDDGF 224
DVHHGN TQ MF DPR V F S+HR++ GTF+P ++ D
Sbjct: 648 DVHHGNGTQHMFEDDPREVGEHLRVCFLSLHRYDHGTFFPMGXXXXLHAMIMHSSHGDEV 707
Query: 225 YTMIGEGPGLGYNINVPWE-NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG 283
IG G G+ W G GDADYLA W ++LP+A +F P+++++SAGFDAA G
Sbjct: 708 QQQIGRAXGTGFTST--WHGTGPHGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARG 765
Query: 284 DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLAC 331
DPLGGC+V+P GY+ + LM A G I+L LEGGYNL SIS S+ AC
Sbjct: 766 DPLGGCQVSPEGYAHLTHLLMGLASGHIILILEGGYNLTSISESMAAC 813
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 206/357 (57%), Gaps = 4/357 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 205 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDVHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL 438
>gi|449506322|ref|XP_002190608.2| PREDICTED: histone deacetylase 4 [Taeniopygia guttata]
Length = 1056
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/427 (36%), Positives = 247/427 (57%), Gaps = 42/427 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 626 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 685
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 686 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAA 743
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G VIE+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 744 RLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 800
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G+
Sbjct: 801 LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGV 858
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GD +YL + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 859 GFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 918
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP 349
++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL ++ + +
Sbjct: 919 NLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVFQ 978
Query: 350 FESTWRVIQAVRKKL---SAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLE 406
+ + ++ K + S +W +L T SL + + E+E+ + T
Sbjct: 979 QRANANAVHSMEKVIEIHSKYWHSLQRFASTVGYSL-------VEAQKCENEEAETVTAM 1031
Query: 407 AVLQVAL 413
A L V +
Sbjct: 1032 ASLSVGV 1038
>gi|390467245|ref|XP_002752140.2| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 7 [Callithrix
jacchus]
Length = 1122
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 211/355 (59%), Gaps = 29/355 (8%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 687 RTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 746
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 747 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 806
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA A GSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 807 SSNAARWATGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 866
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++D VL+ S+HRH+ G F+P + G +G
Sbjct: 867 QQN---KASKILIVDWDVHHGNGTQQTFYQDSSVLYISLHRHDNGNFFPGS--GAVDEVG 921
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 922 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 981
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K
Sbjct: 982 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNK 1036
>gi|302901677|ref|XP_003048487.1| histone deacetylase [Nectria haematococca mpVI 77-13-4]
gi|256729420|gb|EEU42774.1| histone deacetylase [Nectria haematococca mpVI 77-13-4]
Length = 723
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/393 (38%), Positives = 215/393 (54%), Gaps = 36/393 (9%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----------- 53
RR GLL YD+RM H D +HPE+P RI I+ + AG+
Sbjct: 44 RRRGLLPTGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKKAGLVYTGSEADLPR 103
Query: 54 -----PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKN---ISSKQFDSRRDRIASKLNSI 104
P R + + A+ A + H+ +H + ++N IS+ + R S+
Sbjct: 104 IIRECPTRYMWRIAARSATKDEICLAHSADHFSWVENLDKISTAELRELTRRYDQGRESL 163
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y+ S AA L+AG IE + V G++ +AFA++RPPGHHAE D MGFC +NNV VA
Sbjct: 164 YVGSMSYPAALLSAGGAIETCKNVVTGQVKNAFAVIRPPGHHAEFDAPMGFCFFNNVPVA 223
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA----- 219
+ P+L K+LI+DWDVHHGN Q +F++D VL+ S+H + GTFYP
Sbjct: 224 VRVCQQDYPDL-CRKVLILDWDVHHGNGVQNIFYQDANVLYISLHVYANGTFYPGKPPNP 282
Query: 220 -NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
DG G GPGLG NIN+ W + GD +Y+A + I++P+AK+F PD+++ISAGF
Sbjct: 283 ITPDGGIENCGSGPGLGRNINIGWHDQGMGDGEYMAAFQKIIMPIAKEFNPDLVVISAGF 342
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
DAA GD LGGC V+P Y+ M LM A GK+ + LEGGYNL +IS S +A L+ +
Sbjct: 343 DAADGDELGGCFVSPGCYAHMTHMLMSLAGGKVSVCLEGGYNLKAISKSAVAVAQTLMGE 402
Query: 339 KPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
P E+ R++ V+ + +W +
Sbjct: 403 PPPKMELPKINKEAA-RILAKVQAHQAPYWECM 434
>gi|316998105|dbj|BAJ52889.1| histone deacetylase 9 delta 7 [Rattus norvegicus]
Length = 934
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 212/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 591 TGIAYDCLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 650
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 651 VHSEHHSLLYGTSPLDGQKLDPRTLLGDDSRKFFSSLPCGGLGVDSDTIWNELHSSGAAR 710
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 711 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYL---RDQL 767
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 768 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGVGLGEG 825
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YN+N+ W G GD +YL + +++PVA++F PD++++SAGFDA G PLGG +
Sbjct: 826 YNVNIAWTGGLDPPMGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHTPPLGGYK 885
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + K+LM A G++ LALEGG++L +I ++ AC+N LL
Sbjct: 886 VTAKCFGHLTKQLMTLANGRVALALEGGHDLTAICDASEACINALL 931
>gi|336468178|gb|EGO56341.1| hypothetical protein NEUTE1DRAFT_147039 [Neurospora tetrasperma
FGSC 2508]
gi|350289576|gb|EGZ70801.1| hypothetical protein NEUTE2DRAFT_168136 [Neurospora tetrasperma
FGSC 2509]
Length = 831
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 220/395 (55%), Gaps = 37/395 (9%)
Query: 11 IKRR----VGLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI---------- 53
+KRR G YD+RM H D +HPE+P+RI+ I + G+
Sbjct: 64 LKRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEHIMRIFKREGLVFTGDDEDLK 123
Query: 54 ------PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---- 102
P+R + + A+ A + + VH H ++++S K R R+++ ++
Sbjct: 124 KVIRTDPRRYMWRIPARHATKEEICIVHHPEHFRWVEDLSRKPTSELR-RLSTIMDQGRD 182
Query: 103 SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVA 162
S+Y+ + EAA ++AG IE + V G + +AFA++RPPGHHAE D MGFCL+NNV
Sbjct: 183 SLYVGSMTFEAALISAGGAIETCKSVVVGNVKNAFAVIRPPGHHAEFDAPMGFCLFNNVP 242
Query: 163 VAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA--- 219
+AA E PE+ KILI+DWDVHHGN Q MF+ DP +L+ S+H + G+FYP
Sbjct: 243 IAAKICQTEYPEI-CRKILILDWDVHHGNGIQNMFYDDPNILYISLHVYMNGSFYPGKPD 301
Query: 220 ---NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISA 276
DG G GPGLG N+N+ W + GD +Y+A + I++P+A +F PD++IISA
Sbjct: 302 NPMTPDGSIENCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFDPDLVIISA 361
Query: 277 GFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
GFDAA GD LG C V+P Y+ M LM A GK+ + LEGGYNL +IS S LA L+
Sbjct: 362 GFDAADGDELGACFVSPACYAHMTHMLMSLANGKVAVCLEGGYNLTAISKSALAVARTLM 421
Query: 337 EDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+ P E+ RV+ V+ + +W +
Sbjct: 422 GEPPPKMDLPKINKEAA-RVLAKVQAYQAPYWECM 455
>gi|326922329|ref|XP_003207402.1| PREDICTED: histone deacetylase 4-like [Meleagris gallopavo]
Length = 1081
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 217/347 (62%), Gaps = 32/347 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 651 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 710
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 711 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAA 768
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G VIE+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 769 RLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 825
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G+
Sbjct: 826 LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGV 883
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GD +YL + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 884 GFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 943
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 944 NLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALL 990
>gi|401837792|gb|EJT41666.1| HDA1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 706
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 144/374 (38%), Positives = 210/374 (56%), Gaps = 21/374 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ GL YD RM H Y HPE+P RI I+ L G I
Sbjct: 57 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDIGD 116
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ + + A + +L VHT+ H+ I++ + K + + K +S+Y N S +A
Sbjct: 117 LMLKIPVRAATSEEILEVHTKEHLEFIES-TEKMSREQLLKETEKGDSVYFNNDSYASAR 175
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L G IE + V EG + ++ A+VRPPGHHAEP A GFCL++NVAVAA +L PE
Sbjct: 176 LPCGGAIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPE- 234
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +I+I+DWD+HHGN TQK F++D +VL+ S+HR E G +YP G Y GEG G G
Sbjct: 235 SVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEG 294
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N N+ W G GDA+Y+ ++ +++P+ ++F PD++IIS+GFDAA GD +G C V+P
Sbjct: 295 FNCNITWPVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVSPSC 354
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP-VAGSSEAYPFESTW 354
Y M L A+G + + LEGGYNL +I+ S L+ VL+ + P S + P
Sbjct: 355 YGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDSLSDPKPEVI 414
Query: 355 RVIQAVRKKLSAFW 368
+I V + S +W
Sbjct: 415 EMIDKVIRLQSKYW 428
>gi|45383522|ref|NP_989644.1| histone deacetylase 4 [Gallus gallus]
gi|15214038|sp|P83038.1|HDAC4_CHICK RecName: Full=Histone deacetylase 4; Short=HD4
gi|14495171|dbj|BAB60957.1| histone deacetylase-4 [Gallus gallus]
Length = 1080
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 217/347 (62%), Gaps = 32/347 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 650 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 709
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE SS AA
Sbjct: 710 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAA 767
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
LA G VIE+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 768 RLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR-- 824
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G+
Sbjct: 825 LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGV 882
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
G+N+N+ + G GD +YL + +++P+A +F PD++++S+GFDA G PLGG
Sbjct: 883 GFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 942
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 943 NLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALL 989
>gi|148906070|gb|ABR16194.1| unknown [Picea sitchensis]
Length = 648
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 223/374 (59%), Gaps = 21/374 (5%)
Query: 5 SGEGRTI---KRRVGLLYDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCV 58
+GE T+ +RR + +D RM H+ HPE P+R++AI L+AAG+ P +
Sbjct: 241 TGESSTLSLSERRTVIGFDPRMLLHSEVQMKSHPHPERPDRLRAIAASLRAAGVFPAKLF 300
Query: 59 VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLA 117
+ A+E + L +H+ HV+ ++ S R++S + Y NE S+ AA LA
Sbjct: 301 PIPAREVTLEELQKIHSPQHVSSVETTSC--------RLSSYFTADTYTNEHSALAARLA 352
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
AG +A V G++ + FA+VRPPGHHA + MGFCL+NN A+AA +
Sbjct: 353 AGLCAYLATEVMTGQVQNGFALVRPPGHHAGITDVMGFCLHNNAAIAARAAQAAGAK--- 409
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
K+LIVDWDVHHGN TQ++F D VL+ S+HRHE G FYP G +G G G++
Sbjct: 410 -KVLIVDWDVHHGNGTQEIFEHDNSVLYISLHRHEGGRFYPGT--GAANEVGSLDGEGFS 466
Query: 238 INVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
+N+PW++G GD DY+ + H++L +A+ F PD+ IISAGFDAA GDPLGGC VTP+G++
Sbjct: 467 VNIPWKHGGVGDEDYIFTFQHVVLLIAEQFAPDLTIISAGFDAAKGDPLGGCEVTPFGFA 526
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVI 357
M K L D +GK+++ LEGGYNL SIS S A + VLL + + + P +S +
Sbjct: 527 YMTKMLSDLFEGKLLVILEGGYNLRSISASATAVVKVLLGENMGFVTDDIKPSKSCLETL 586
Query: 358 QAVRKKLSAFWPTL 371
V + S +WP L
Sbjct: 587 LEVLEIQSHYWPIL 600
>gi|452845402|gb|EME47335.1| histone deacetylase hda1-like protein [Dothistroma septosporum
NZE10]
Length = 829
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 215/389 (55%), Gaps = 26/389 (6%)
Query: 14 RVGLLYDERMCKH---NTPDGDYHPENPNRIKAIWNKLQAAGIPQR-----------CVV 59
+ GL+YD RM H + D HPE+P RI AI+ AG+ R
Sbjct: 97 QTGLVYDVRMRFHVEAEPVEDDMHPEDPRRIHAIYEAFVNAGLAWREGQSGPSSDYYMGR 156
Query: 60 LNAKEAKDKNLLSVHTENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYL 116
++A+ + + VHT H N + + +++ + R + +SIYL+ + A L
Sbjct: 157 IDARMVTREEVCRVHTVEHFNWVQSLRTLTTDELKEERQYPDHQNDSIYLSTSTPYCAAL 216
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
+AG IE V G++ + FA++RPPGHHAE ++A GFC Y+N ++A E E
Sbjct: 217 SAGGAIEACRAVVLGKVKNVFAVIRPPGHHAEREDAKGFCFYDNCSIATKACQAEFGE-K 275
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD-------GFYTMIG 229
K+ I+DWDVHHGN Q+ + DP VL+ S+H H+ G+FYP + G + G
Sbjct: 276 CRKVFILDWDVHHGNGIQEANYDDPNVLYISLHMHKKGSFYPEHSYRDNRVAYGDHLHCG 335
Query: 230 EGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGC 289
G GLG N+N+PW GDADY+ + I++P+A DF PD+++I+AGFDAA GD LGGC
Sbjct: 336 SGAGLGKNVNIPWSKQGMGDADYIYAFQQIVMPIAIDFDPDLVVIAAGFDAAEGDMLGGC 395
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP 349
+V+P GY+ M LM A GK+ + LEGGYNL SIS S A ++ + P +E P
Sbjct: 396 KVSPAGYAHMTHMLMSLADGKMAVCLEGGYNLESISRSATAVARTMMGEPP-DRLAETTP 454
Query: 350 FESTWRVIQAVRKKLSAFWPTLADELPTK 378
S ++ V ++ S FW L + P++
Sbjct: 455 SISAVDDVKLVLRQQSRFWSCLFPKNPSE 483
>gi|50290843|ref|XP_447854.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527165|emb|CAG60803.1| unnamed protein product [Candida glabrata]
Length = 693
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 198/345 (57%), Gaps = 20/345 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ G+ YD RM H Y HPE+P RI I+ L G I
Sbjct: 44 KTGICYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVNDIGD 103
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ + + A + +L VH++ H+ I+ + K + K +S+Y N S +
Sbjct: 104 LMLKIPIRAATAEEILEVHSKEHLEFIEK-TEKMNREELLKETEKGDSVYFNNDSYATSR 162
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L G IE + V EG + ++ A+VRPPGHHAEP+ A GFCL++NVAVAA +L PE
Sbjct: 163 LPCGGAIEACKAVVEGRVKNSLAVVRPPGHHAEPEAAGGFCLFSNVAVAAKNILKNYPE- 221
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ +ILI+DWDVHHGN TQK F+ D RVL+ S+HR E G +YP G Y IGEG G G
Sbjct: 222 SVRRILILDWDVHHGNGTQKAFYDDDRVLYISLHRFELGKYYPGTIQGQYDQIGEGKGKG 281
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+N N+ W G GDA+Y+ ++ +++P+ ++F PD++IIS+GFDAA GD +G C VTP
Sbjct: 282 FNCNITWPVGGVGDAEYMWAFEQVVMPMGREFQPDLVIISSGFDAADGDTIGQCHVTPSC 341
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL +I+ S L+ +L+ + P
Sbjct: 342 YGHMTHMLKSLARGNLCVVLEGGYNLDAIAISALSVAKILIGEPP 386
>gi|340515774|gb|EGR46026.1| histone deacetylase [Trichoderma reesei QM6a]
Length = 725
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 207/371 (55%), Gaps = 47/371 (12%)
Query: 9 RTIKRRV---GLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAG---------- 52
+ ++RR+ G YD+RM H D +HPE+P RI I+ + G
Sbjct: 41 QRVRRRLLATGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKKMGLVYTGPESEL 100
Query: 53 --IPQRCVV-----LNAKEAKDKNLLSVHTENHVNLIKNISS----------KQFDSRRD 95
I + C + A+ A + + H+ H+ ++++ S K+FD R+
Sbjct: 101 PAIMKNCPTKYMWRIPARSATREEICLAHSPEHLAWVESLGSISTAELRELTKKFDQGRE 160
Query: 96 RIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGF 155
S+Y+ S AA L+ G IE + V G++ +AFA++RPPGHHAE D+ MGF
Sbjct: 161 -------SLYVGSMSYPAALLSVGGAIETCKSVVTGQVKNAFAVIRPPGHHAEFDQPMGF 213
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C +NNV VA + P+ K+LI+DWDVHHGN TQ +F++DP VL+ S+H ++ G
Sbjct: 214 CFFNNVPVAVKVCQQDYPD-ECRKVLILDWDVHHGNGTQNIFYQDPNVLYISIHVYQNGV 272
Query: 216 FYPA------NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGP 269
FYP DG G GPGLG NIN+ W + GD +Y+A I++P+A +F P
Sbjct: 273 FYPGKPPNPMTPDGGIEHCGTGPGLGKNINIGWHDQGMGDGEYMAALQKIVMPIANEFNP 332
Query: 270 DIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVL 329
D+++ISAGFDAA GD LGGC VTP Y+ M LM A GK+ + LEGGYNL +ISNS +
Sbjct: 333 DLVVISAGFDAADGDELGGCFVTPACYAHMTHMLMSLADGKVAVCLEGGYNLQAISNSAV 392
Query: 330 ACMNVLLEDKP 340
A L+ + P
Sbjct: 393 AVARTLMGEPP 403
>gi|350646212|emb|CCD59123.1| histone deacetylase,putative [Schistosoma mansoni]
Length = 1132
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 215/358 (60%), Gaps = 6/358 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
+YDERM H E P R A +K G+ RC+++N + A D L H
Sbjct: 52 TAFIYDERMLLHKNIWFPNFLECPERFSATIDKCTTYGLLSRCLIINPEPATDDFLTLYH 111
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
++ IK ++ + D+ ++++ L+S+Y N+ + +A L+ GS I+ + + G++
Sbjct: 112 QTKYIEQIKQTTTME-DNELKQLSATLDSVYFNKHTDLSARLSVGSWIQAVDLIHHGDVR 170
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+AF +VRPPGHHA +EA GFC+YNNVA+AA++ + + L N+ILIVDWDVHHGN+TQ
Sbjct: 171 NAFCLVRPPGHHALTNEACGFCIYNNVAIAANYAIEK---LNYNRILIVDWDVHHGNTTQ 227
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F+ +P+VLF S+HR++ G F+P + Y IG G G G+N+N+ + GD+DYL
Sbjct: 228 YAFYDNPKVLFISIHRYDNGEFWPNLRESNYDFIGTGRGRGFNVNIALNDKDIGDSDYLT 287
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
++ I+LP+A +F P+++++SAG+D++ G P+G ++P Y+ + KLM FA+GK+++
Sbjct: 288 IFHRIVLPLAYEFDPELVLVSAGYDSSFGCPVGQLNLSPSLYAHLTHKLMAFAEGKVIVG 347
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFE-STWRVIQAVRKKLSAFWPTL 371
LEGGY L ++S SV ++ LL D P+ P S I LS W L
Sbjct: 348 LEGGYYLDTLSESVGHTLSALLGD-PMPSLDPMKPINPSVLETISNCISTLSFRWKFL 404
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 195/392 (49%), Gaps = 41/392 (10%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
L+YD RM H + +PENP RIK + L+ G+ +RC + A+ A LL VHTE
Sbjct: 474 LVYDNRMQNHKNEEDPTYPENPERIKHTYALLKQLGLKRRCKCIEARYATRTELLRVHTE 533
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
+VN I + + + + D AS+ NS+Y N S L S++ E+ +
Sbjct: 534 EYVNTIASTVNMEQTALNDFGASE-NSVYFNCVSVFFLNLIICSLVTDFEKYIMVFYLNG 592
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
A++RPPGHHA D MGFC +NNVA+ A + + G+ +I I+DWDVHHGN T ++
Sbjct: 593 MALIRPPGHHALKDRCMGFCFFNNVAIGAR---HAQQVYGLERIAIIDWDVHHGNGTAEI 649
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
F DP +L+ SVHR + G ++P +D G G GLG I++ W D DY+ +
Sbjct: 650 FEDDPNILYISVHRFDHGRYFPNSDFSSSQFCGTGEGLGRTIHIAWNGRDVKDGDYIVAF 709
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ-------- 308
+I++P+ +F P +I++SAGFDAA GD LG V+P ++ + LM
Sbjct: 710 TNIIIPILYEFRPQLILVSAGFDAAHGDKLGRLGVSPECFAHLTHLLMTVVHLNPSVYTL 769
Query: 309 -----------------------------GKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
G +VLALEGGY + ++S V C+ LL D
Sbjct: 770 NHRKNSPIISTPTRQTRQRLQQEKSISYSGGLVLALEGGYQITALSQCVAHCVAALLGDN 829
Query: 340 PVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+S E + + +Q + S +W L
Sbjct: 830 CPRLASNLSISEKSCKSMQQTIEIHSNYWNML 861
>gi|190409024|gb|EDV12289.1| histone deacetylase [Saccharomyces cerevisiae RM11-1a]
gi|256269484|gb|EEU04772.1| Hda1p [Saccharomyces cerevisiae JAY291]
gi|290770994|emb|CAY82163.2| Hda1p [Saccharomyces cerevisiae EC1118]
Length = 706
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 201/347 (57%), Gaps = 24/347 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL YD RM H Y HPE+P RI I+ L G+ +
Sbjct: 57 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGD 116
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI--ASKLNSIYLNEGSSEA 113
+ + A + +L VHT+ H+ I+ S + SR + + K +S+Y N S +
Sbjct: 117 LMLKIPVRAATSEEILEVHTKEHLEFIE---STEKMSREELLKETEKGDSVYFNNDSYAS 173
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A L G IE + V EG + ++ A+VRPPGHHAEP A GFCL++NVAVAA +L P
Sbjct: 174 ARLPCGGAIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYP 233
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +I+I+DWD+HHGN TQK F++D +VL+ S+HR E G +YP G Y GEG G
Sbjct: 234 E-SVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKG 292
Query: 234 LGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTP 293
G+N N+ W G GDA+Y+ ++ +++P+ ++F PD++IIS+GFDAA GD +G C VTP
Sbjct: 293 EGFNCNITWPVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTP 352
Query: 294 YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL +I+ S L+ VL+ + P
Sbjct: 353 SCYGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPP 399
>gi|427781123|gb|JAA56013.1| Putative histone deacetylase domain protein [Rhipicephalus
pulchellus]
Length = 471
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 224/422 (53%), Gaps = 31/422 (7%)
Query: 20 DERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHV 79
D M KH P + PE P R++ LQ G+ R ++L ++ A D+ L VHT++H+
Sbjct: 9 DNAMLKHWNPLKRWMPERPKRLQVAHQLLQTKGLLDRALILESRYATDEELGLVHTKDHI 68
Query: 80 NLIKNISSKQFDS------RRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
LI+ + R D + + + + +++ A LA G +++ + V G+
Sbjct: 69 ELIRATEKMSLEEVTLENHRLDPVTT------ICQETNQCARLACGCLLQAVDAVVSGKC 122
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ A++RPPGHH+ D GFC++NN AVAA + + G+ +ILI DWDVHHGN T
Sbjct: 123 RNGVALIRPPGHHSAADTVSGFCIFNNAAVAARYAMQR---YGLKRILIFDWDVHHGNGT 179
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F+ VL+ S+HR+ +P + +G G G GYNIN+PW DADYL
Sbjct: 180 QDIFYDSNSVLYISLHRYSKEKIFPKTEISDAAYVGRGDGRGYNINIPWTKPAITDADYL 239
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+++PVA +F P+++I+SAGFD+A GD LG C VTP GY M L + A G++++
Sbjct: 240 TAMYQLVMPVASEFDPELVIVSAGFDSAKGDILGDCCVTPAGYQHMTSLLKNLAHGRVII 299
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
LEGGYN+ ++ S+ ACM L+ D P + P S + I + +S +W L +
Sbjct: 300 QLEGGYNVDVVAESLAACMATLMGD-PCDSVTNMQPSASAMQSIARAKAAVSPYWKCLTE 358
Query: 374 ELPT-------------KLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQ-VALSKLKVD 419
E PT ++ L P MISS S+ + L+ V + + L+ +V
Sbjct: 359 E-PTPIVVEPERDIETWQIPVLSCPHGKMISSLPSQGLSADLRNLDNVNKWICLTCFQVL 417
Query: 420 DG 421
+G
Sbjct: 418 EG 419
>gi|326911293|ref|XP_003201995.1| PREDICTED: histone deacetylase 10-like [Meleagris gallopavo]
Length = 557
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 216/371 (58%), Gaps = 10/371 (2%)
Query: 16 GLLYDERMCKH----NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
L+YDE M +H N P D E P R+ A + +LQ + +RC+ + A+E ++ +L
Sbjct: 6 ALIYDEAMTRHKLLWNDPICDI--EVPERLSASYEQLQCYHLVERCIPVPAREGSEEEIL 63
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VH+ H+ K+ + + RI+ +S + + + A LA G+ +++ + V G
Sbjct: 64 LVHSSEHLEAAKSTQAMN-EEELKRISGNYDSFFFHPNTYHCARLAVGAALQLVDSVMSG 122
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
++ + A+VRPPGHH++ + A GFCL+NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 123 KVCNGMALVRPPGHHSQRNAANGFCLFNNVAIAAEY---AKLKYGLQRILIVDWDVHHGQ 179
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ +F +DP VL+FS HR+E F+P+ + Y +G G G G+NIN+PW G++D
Sbjct: 180 GTQYIFEEDPSVLYFSWHRYEHQEFWPSLKESDYDAVGLGKGKGFNINLPWNKVGMGNSD 239
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA + H+LLP+A +F P+++++S+G+D+ GDP G TP ++ + LM A GK+
Sbjct: 240 YLAAFFHVLLPMAFEFDPELVLVSSGYDSGIGDPEGQMNATPEVFAHLTHFLMQLAHGKL 299
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+ LEGGY+L S+S SV + LL D + E P S IQ VR +W L
Sbjct: 300 CVILEGGYHLRSLSESVCMTVRTLLRDPLPQVTGEMAPCLSAIESIQNVRAAHKPYWKWL 359
Query: 372 ADELPTKLTSL 382
E+ SL
Sbjct: 360 TYEVTAHKASL 370
>gi|367035072|ref|XP_003666818.1| histone deacetylase A-like protein [Myceliophthora thermophila ATCC
42464]
gi|347014091|gb|AEO61573.1| histone deacetylase A-like protein [Myceliophthora thermophila ATCC
42464]
Length = 754
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 151/393 (38%), Positives = 217/393 (55%), Gaps = 36/393 (9%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----------- 53
RR GLL YD+RM H D +HPE+P+RI+ I + G+
Sbjct: 68 RRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEYIMRTFKKNGLVFTGSDAELIR 127
Query: 54 -----PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRD---RIASKLNSI 104
P + + + A+EA + + VH H ++ +S K R+ R+ +S+
Sbjct: 128 IIQTEPTKYMWRIPAREATKEEICMVHHPGHFLWVEALSRKSTQELRELSTRMDQGRDSL 187
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y+ + EA+ ++AG IE + V G + +AFAI+RPPGHHAE D MGFCL+NNV +A
Sbjct: 188 YVGSMTYEASLISAGGAIETCKSVVAGVVKNAFAIIRPPGHHAEFDAPMGFCLFNNVPIA 247
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA----- 219
A + P+L KILI+DWDVHHGN Q +F+ DP +L+ S+H + G FYP
Sbjct: 248 AKICQADYPDL-CRKILILDWDVHHGNGIQNLFYDDPNILYISLHVYRNGEFYPGKPDNP 306
Query: 220 -NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
DG G GPGLG N+N+ W + GD +Y+A + I++P+A +F PD++IISAGF
Sbjct: 307 MTPDGGLEHCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFNPDLVIISAGF 366
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
DAAAGD LG C VTP Y+ M LM A GK+ + LEGGY+L +IS S LA L+ +
Sbjct: 367 DAAAGDELGACFVTPSCYAHMTHMLMSLAGGKVAVCLEGGYDLEAISKSALAVARTLMGE 426
Query: 339 KPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
P E+ +V+ V+ + +W +
Sbjct: 427 PPPKMEIPKISREAA-KVLAKVQAYQAPYWECM 458
>gi|323352514|gb|EGA85014.1| Hda1p [Saccharomyces cerevisiae VL3]
Length = 706
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 201/347 (57%), Gaps = 24/347 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL YD RM H Y HPE+P RI I+ L G+ +
Sbjct: 57 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGD 116
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI--ASKLNSIYLNEGSSEA 113
+ + A + +L VHT+ H+ I+ S + SR + + K +S+Y N S +
Sbjct: 117 LMLKIPVRAATSEEILEVHTKEHLEFIE---STEKMSREELLKETEKGDSVYFNNDSYAS 173
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A L G IE + V EG + ++ A+VRPPGHHAEP A GFCL++NVAVAA +L P
Sbjct: 174 ARLPCGGAIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYP 233
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +I+I+DWD+HHGN TQK F++D +VL+ S+HR E G +YP G Y GEG G
Sbjct: 234 E-SVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKG 292
Query: 234 LGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTP 293
G+N N+ W G GDA+Y+ ++ +++P+ ++F PD++IIS+GFDAA GD +G C VTP
Sbjct: 293 EGFNCNITWPVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTP 352
Query: 294 YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL +I+ S L+ VL+ + P
Sbjct: 353 SCYGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPP 399
>gi|145348386|ref|XP_001418630.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578860|gb|ABO96923.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 480
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 226/386 (58%), Gaps = 18/386 (4%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
KRRVGLLYD+ M H + H E P R + + N+++A + RC L A+EA + L
Sbjct: 80 KRRVGLLYDDAMEMHEK---EGHFEQPARHRVVVNEIKAEKLDLRCERLEAREATEAELT 136
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN----SIYLNEGSSEAAYLAAGSVIEVAER 127
HT+ HV + S+ D + ++ + + I+ + +++ A +AAG+V E
Sbjct: 137 RAHTKEHVAFVD--SAFDVDGEKVQVMTGEDVFGDDIFFTKHTAKGARMAAGTVAEACLA 194
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
V G+++ AFA+VRPPGHHA +AMGFC +NN V A ++ + ++LI+DWDV
Sbjct: 195 VGRGDVDRAFAVVRPPGHHAVCGQAMGFCFFNNAVVGARAVIETKL---CERVLIIDWDV 251
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN Q + ++D V++ S+HR+ G FYP G +G+G G N+NV W
Sbjct: 252 HHGNGIQDIVYEDESVMYVSLHRYGDG-FYPGT--GAVAEVGKG---GTNVNVAWSEKGL 305
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GDADYLA +D ++ PV K F PD+III+AGFDAA GDPLGG V+P GY M K+L++
Sbjct: 306 GDADYLAAFDVVIEPVVKSFAPDLIIIAAGFDAADGDPLGGMMVSPTGYMHMTKRLIEIG 365
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAF 367
G++V+ALEGGY L ++ A + LL D+P SS + P +S+ ++ + + L+
Sbjct: 366 TGRVVVALEGGYALRPLATCATATLRALLGDEPKPISSRSRPRKSSIKLCRELASLLAEH 425
Query: 368 WPTLADELPTKLTSLKAPPAHMISSS 393
WP L + T+L A A ++ ++
Sbjct: 426 WPVLESDEYKNSTALIAKRATVVGAA 451
>gi|6324307|ref|NP_014377.1| Hda1p [Saccharomyces cerevisiae S288c]
gi|1730711|sp|P53973.1|HDA1_YEAST RecName: Full=Histone deacetylase HDA1
gi|1301851|emb|CAA95883.1| HDA1 [Saccharomyces cerevisiae]
gi|151944501|gb|EDN62779.1| histone deacetylase [Saccharomyces cerevisiae YJM789]
gi|285814630|tpg|DAA10524.1| TPA: Hda1p [Saccharomyces cerevisiae S288c]
gi|349580905|dbj|GAA26064.1| K7_Hda1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296968|gb|EIW08069.1| Hda1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 706
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 201/347 (57%), Gaps = 24/347 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL YD RM H Y HPE+P RI I+ L G+ +
Sbjct: 57 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGD 116
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI--ASKLNSIYLNEGSSEA 113
+ + A + +L VHT+ H+ I+ S + SR + + K +S+Y N S +
Sbjct: 117 LMLKIPVRAATSEEILEVHTKEHLEFIE---STEKMSREELLKETEKGDSVYFNNDSYAS 173
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A L G IE + V EG + ++ A+VRPPGHHAEP A GFCL++NVAVAA +L P
Sbjct: 174 ARLPCGGAIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYP 233
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +I+I+DWD+HHGN TQK F++D +VL+ S+HR E G +YP G Y GEG G
Sbjct: 234 E-SVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKG 292
Query: 234 LGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTP 293
G+N N+ W G GDA+Y+ ++ +++P+ ++F PD++IIS+GFDAA GD +G C VTP
Sbjct: 293 EGFNCNITWPVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTP 352
Query: 294 YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL +I+ S L+ VL+ + P
Sbjct: 353 SCYGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPP 399
>gi|323335783|gb|EGA77063.1| Hda1p [Saccharomyces cerevisiae Vin13]
Length = 706
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 201/347 (57%), Gaps = 24/347 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL YD RM H Y HPE+P RI I+ L G+ +
Sbjct: 57 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGD 116
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI--ASKLNSIYLNEGSSEA 113
+ + A + +L VHT+ H+ I+ S + SR + + K +S+Y N S +
Sbjct: 117 LMLKIPVRAATSEEILEVHTKEHLEFIE---STEKMSREELLKETEKGDSVYFNNDSYAS 173
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A L G IE + V EG + ++ A+VRPPGHHAEP A GFCL++NVAVAA +L P
Sbjct: 174 ARLPCGGAIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYP 233
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +I+I+DWD+HHGN TQK F++D +VL+ S+HR E G +YP G Y GEG G
Sbjct: 234 E-SVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKG 292
Query: 234 LGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTP 293
G+N N+ W G GDA+Y+ ++ +++P+ ++F PD++IIS+GFDAA GD +G C VTP
Sbjct: 293 EGFNCNITWPVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTP 352
Query: 294 YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL +I+ S L+ VL+ + P
Sbjct: 353 SCYGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPP 399
>gi|322707690|gb|EFY99268.1| putative histone deacetylase A [Metarhizium anisopliae ARSEF 23]
Length = 744
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 217/393 (55%), Gaps = 36/393 (9%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----------- 53
RR GLL YD+RM H D +HPE+P RI I+ + AG+
Sbjct: 55 RRRGLLPTGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKRAGLVYTGPEAELPK 114
Query: 54 -----PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNI---SSKQFDSRRDRIASKLNSI 104
P R + + A+ A + + H+ H+ ++++ S+ + R S+
Sbjct: 115 IIKECPTRYMWRIPARPATRQEICLAHSSEHMTWVEHLDKLSTAELREMTKRYDQGRESL 174
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y+ S AA L+AG I++ + V G++ +AFA++RPPGHHAE D MGFC +NNV VA
Sbjct: 175 YVGSMSFPAALLSAGGAIDICKNVVSGQVKNAFAVIRPPGHHAEYDAPMGFCFFNNVPVA 234
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA----- 219
+ ++ K+L++DWDVHHGN Q +F++DP VL+ S+H ++ G FYP
Sbjct: 235 VRVCQQDYADI-CRKVLVLDWDVHHGNGIQNIFYEDPNVLYISIHVYQNGHFYPGKPPSP 293
Query: 220 -NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
DG G GPGLG NIN+ W + GD +Y+A + I++P+AK+F PD+++ISAGF
Sbjct: 294 ETPDGGIENCGAGPGLGKNINIGWHDQGMGDGEYMAAFQKIIMPIAKEFNPDLVVISAGF 353
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
DAA GD LGGC VTP Y+ M LM A GK+ + LEGGYNL +ISNS +A L+ +
Sbjct: 354 DAADGDELGGCFVTPPCYAHMTHMLMSLADGKVAVCLEGGYNLSAISNSAVAVARTLMGE 413
Query: 339 KPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
P + E+ R + V+ + +W +
Sbjct: 414 PPPKMTIPKLNKEAA-RTLAKVQAYQAPYWECM 445
>gi|207341624|gb|EDZ69626.1| YNL021Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 690
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 201/347 (57%), Gaps = 24/347 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGIPQRCVV-------- 59
+ GL YD RM H Y HPE+P RI I+ L G+ +
Sbjct: 41 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGD 100
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI--ASKLNSIYLNEGSSEA 113
+ + A + +L VHT+ H+ I+ S + SR + + K +S+Y N S +
Sbjct: 101 LMLKIPVRAATSEEILEVHTKEHLEFIE---STEKMSREELLKETEKGDSVYFNNDSYAS 157
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A L G IE + V EG + ++ A+VRPPGHHAEP A GFCL++NVAVAA +L P
Sbjct: 158 ARLPCGGAIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYP 217
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +I+I+DWD+HHGN TQK F++D +VL+ S+HR E G +YP G Y GEG G
Sbjct: 218 E-SVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKG 276
Query: 234 LGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTP 293
G+N N+ W G GDA+Y+ ++ +++P+ ++F PD++IIS+GFDAA GD +G C VTP
Sbjct: 277 EGFNCNITWPVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTP 336
Query: 294 YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL +I+ S L+ VL+ + P
Sbjct: 337 SCYGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPP 383
>gi|47211722|emb|CAF93554.1| unnamed protein product [Tetraodon nigroviridis]
Length = 903
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 161/451 (35%), Positives = 246/451 (54%), Gaps = 94/451 (20%)
Query: 10 TIKRR--VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
+IK R GL+YD +M KH GD HPE+ RI++IW++LQ G+ +C + ++A
Sbjct: 397 SIKPRFTTGLVYDSQMLKHQCTCGDNSSHPEHAGRIQSIWSRLQERGLRGQCESIRGRKA 456
Query: 66 KDKNLLSVHTENHVNL--IKNISSKQFDSRR------DRIASKL---------NSIYLNE 108
+ L SVHTE HV L ++ + D+R+ R+ L ++I+
Sbjct: 457 TLEELQSVHTERHVLLYGTNPLNRLKLDNRKLAGILSQRMFVMLPCGGVGVDNDTIWNES 516
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL 168
+S A+ +AAGSV+E+A RVA+GEL + FA+VRPPGHHA+P MGFC +N+VA+AA L
Sbjct: 517 HTSTASRMAAGSVVELAFRVAKGELKNGFAVVRPPGHHADPSNPMGFCYFNSVAIAAKQL 576
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
++ L ++KILIVDWDVHHGN TQ++F+ DP VL+ S+HR++ G F+P + G +
Sbjct: 577 QHK---LSVSKILIVDWDVHHGNGTQEVFYSDPSVLYISLHRYDNGNFFPGS--GSPAEV 631
Query: 229 GEGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP 285
G G G G+N+N+ W G GDA+YLA + +++P+A++F PD++++SAGFDAA G+P
Sbjct: 632 GTGAGEGFNVNIAWTGGLDPPMGDAEYLAAFRSVVMPIAQEFSPDVLLVSAGFDAAEGNP 691
Query: 286 --LG---------------GCRVTPYG--------------------------------- 295
LG GC + P G
Sbjct: 692 ALLGGYKVSAKCKHRSPTAGCALRPPGPGRLCAFDFAAEMPARTSRFVSLRQLDSGTHDG 751
Query: 296 -------------YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKP 340
+S + ++LM A G++VL LEGG++L +I ++ AC++ LL +D
Sbjct: 752 FWFFSVFFFSAAGFSFLTRQLMSLAGGRVVLVLEGGHDLTAICDASEACVSALLGMQDPL 811
Query: 341 VAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
P + R +Q V K S +W ++
Sbjct: 812 TEEVLLQKPNANAVRSLQTVIKIQSQYWQSV 842
>gi|365763369|gb|EHN04898.1| Hda1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 706
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 202/347 (58%), Gaps = 24/347 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAGI---PQRCVV----- 59
+ GL YD RM H Y HPE+P RI I+ L G+ P V
Sbjct: 57 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPXLSGVDDLGD 116
Query: 60 ----LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRI--ASKLNSIYLNEGSSEA 113
+ + A + +L VHT+ H+ I+ S + SR + + K +S+Y N S +
Sbjct: 117 LMLKIPVRAATSEEILEVHTKEHLEFIE---STEKMSREELLKETEKGDSVYFNNDSYAS 173
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A L G IE + V EG + ++ A+VRPPGHHAEP A GFCL++NVAVAA +L P
Sbjct: 174 ARLPCGGAIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYP 233
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +I+I+DWD+HHGN TQK F++D +VL+ S+HR E G +YP G Y GEG G
Sbjct: 234 E-SVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKG 292
Query: 234 LGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTP 293
G+N N+ W G GDA+Y+ ++ +++P+ ++F PD++IIS+GFDAA GD +G C VTP
Sbjct: 293 EGFNCNITWPVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTP 352
Query: 294 YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL +I+ S L+ VL+ + P
Sbjct: 353 SCYGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPP 399
>gi|256076430|ref|XP_002574515.1| histone deacetylase hda2 [Schistosoma mansoni]
Length = 1132
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 215/358 (60%), Gaps = 6/358 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
+YDERM H E P R A +K G+ RC+++N + A D L H
Sbjct: 52 TAFIYDERMLLHKNIWFPNFLECPERFSATIDKCTTYGLLSRCLIINPEPATDDFLTLYH 111
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
++ IK ++ + D+ ++++ L+S+Y N+ + +A L+ GS I+ + + G++
Sbjct: 112 QTKYIEQIKQTTTME-DNELKQLSATLDSVYFNKHTDLSARLSVGSWIQAVDLIHHGDVR 170
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+AF +VRPPGHHA +EA GFC+YNNVA+AA++ + + L N+ILIVDWDVHHGN+TQ
Sbjct: 171 NAFCLVRPPGHHALTNEACGFCIYNNVAIAANYAIEK---LNYNRILIVDWDVHHGNTTQ 227
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F+ +P+VLF S+HR++ G F+P + Y IG G G G+N+N+ + GD+DYL
Sbjct: 228 YAFYDNPKVLFISIHRYDNGEFWPNLRESNYDFIGTGRGRGFNVNIALNDVYIGDSDYLT 287
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
++ I+LP+A +F P+++++SAG+D++ G P+G ++P Y+ + KLM FA+GK+++
Sbjct: 288 IFHRIVLPLAYEFDPELVLVSAGYDSSFGCPVGQLNLSPSLYAHLTHKLMAFAEGKVIVG 347
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFE-STWRVIQAVRKKLSAFWPTL 371
LEGGY L ++S SV ++ LL D P+ P S I LS W L
Sbjct: 348 LEGGYYLDTLSESVGHTLSALLGD-PMPSLDPMKPINPSVLETISNCISTLSFRWKFL 404
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 195/392 (49%), Gaps = 41/392 (10%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
L+YD RM H + +PENP RIK + L+ G+ +RC + A+ A LL VHTE
Sbjct: 474 LVYDNRMQNHKNEEDPTYPENPERIKHTYALLKQLGLKRRCKCIEARYATRTELLRVHTE 533
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
+VN I + + + + D AS+ NS+Y N S L S++ E+ +
Sbjct: 534 EYVNTIASTVNMEQTALNDFGASE-NSVYFNCVSVFFLNLIICSLVTDFEKYIMVFYLNG 592
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
A++RPPGHHA D MGFC +NNVA+ A + + G+ +I I+DWDVHHGN T ++
Sbjct: 593 MALIRPPGHHALKDRCMGFCFFNNVAIGAR---HAQQVYGLERIAIIDWDVHHGNGTAEI 649
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
F DP +L+ SVHR + G ++P +D G G GLG I++ W D DY+ +
Sbjct: 650 FEDDPNILYISVHRFDHGRYFPNSDFSSSQFCGTGEGLGRTIHIAWNGRDVKDGDYIVAF 709
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ-------- 308
+I++P+ +F P +I++SAGFDAA GD LG V+P ++ + LM
Sbjct: 710 TNIIIPILYEFRPQLILVSAGFDAAHGDKLGRLGVSPECFAHLTHLLMTVVHLNPSVYTL 769
Query: 309 -----------------------------GKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
G +VLALEGGY + ++S V C+ LL D
Sbjct: 770 NHRKNSPIISTPTRQTRQRLQQEKSISYSGGLVLALEGGYQITALSQCVAHCVAALLGDN 829
Query: 340 PVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+S E + + +Q + S +W L
Sbjct: 830 CPRLASNLSISEKSCKSMQQTIEIHSNYWNML 861
>gi|147906871|ref|NP_001089352.1| histone deacetylase 10 [Xenopus laevis]
gi|62185688|gb|AAH92320.1| MGC115178 protein [Xenopus laevis]
Length = 683
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 212/359 (59%), Gaps = 6/359 (1%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+YDE M + D + E P R+ + + +LQ + +RC+ L +EA D+ +
Sbjct: 5 TALVYDEEMMSYKLLWDDPECSIEVPERLSSSYKRLQDYDLVKRCIQLPVREATDEEITL 64
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +++ ++K+ + + I+ K +++ ++ S A L+ G +++ + + E
Sbjct: 65 VHSHDYLQVVKSTQTMN-EKELKEISQKYTAVFYHQNSFRCAKLSLGGTLQLVDAILTRE 123
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + AIVRPPGHH++ ++ GFC++NNVA+AA + + + + +ILIVDWDVHHG
Sbjct: 124 VQNGMAIVRPPGHHSQRNQGNGFCVFNNVAIAAEY---AKKKYKLERILIVDWDVHHGQG 180
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F +DP VL+FS HR+E TF+P + Y +IG G G G+NIN+PW G+ADY
Sbjct: 181 IQYIFEEDPSVLYFSWHRYEHKTFWPYLRESDYDVIGRGKGTGFNINLPWNKVGMGNADY 240
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P+++++SAG+D+A GDP G TP +S + LM+ A GK+
Sbjct: 241 IAAFFHVLLPLAFEFNPELVLVSAGYDSAIGDPEGRMCATPECFSHLTNMLMNLAGGKLC 300
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL S++ SV + LL D + E P S IQ VR + +W L
Sbjct: 301 AVLEGGYNLRSLAESVCMTVRTLLGDPLPRLTGEMTPCHSALESIQNVRAAHTPYWKCL 359
>gi|302832161|ref|XP_002947645.1| hypothetical protein VOLCADRAFT_120505 [Volvox carteri f.
nagariensis]
gi|300266993|gb|EFJ51178.1| hypothetical protein VOLCADRAFT_120505 [Volvox carteri f.
nagariensis]
Length = 696
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 204/333 (61%), Gaps = 16/333 (4%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VGLLYD+ M +H PD H E P+RI ++ LQ G+ RC L ++A D+ LL H
Sbjct: 87 VGLLYDQSMEQHFGPD---HYERPSRIIQMYATLQEQGLLGRCWRLVPRQATDEELLLGH 143
Query: 75 TENHVNLIKNISSKQFDSRRDRIA--------SKLNSIYLNEGSSEAAYLAAGSVIEVAE 126
+E+H+ + ++ S+ + SR D +A ++ +Y+ G++ AA AAG ++ +
Sbjct: 144 SEDHIRKVDSMFSELYPSRPDTLADAEYCYADGRMGDVYVCGGTARAARFAAGCCVQAVQ 203
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
V GE+ A A+VRPPGHHAE + AMGFC +NNVAVAA + P G ++ ++DWD
Sbjct: 204 SVLSGEVARALAVVRPPGHHAECERAMGFCFFNNVAVAAL-AALQTP--GTRRVAVLDWD 260
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHGN Q M + P L+ S+HR + FYP GF GEG G G+N+NVPW
Sbjct: 261 VHHGNGIQNMLLQRPDALYISIHR-DPKRFYPYTS-GFLGEAGEGSGTGFNVNVPWLKKG 318
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
GD DY A + I+ P+ + + PD++I++AGFDAA GDPLG C+V+P GY M ++L+ F
Sbjct: 319 MGDGDYRAAFSLIVEPLLESYQPDLVIVAAGFDAADGDPLGACKVSPEGYGWMTERLLRF 378
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
A GK+VLALEGGYN S AC+ LLE +
Sbjct: 379 AGGKLVLALEGGYNNRVTSWCAAACVRTLLEGR 411
>gi|324504135|gb|ADY41786.1| Histone deacetylase 6 [Ascaris suum]
Length = 572
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 230/435 (52%), Gaps = 35/435 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L YD R+ H H E P R I +L+ G+ +RC +L +EA L VH
Sbjct: 141 TALAYDPRVELHREEIDMAHVERPERTSMIAKRLRDTGLLRRCAILQPREATYDELRLVH 200
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE-- 132
H+ ++ I+ +S R R NS+Y + S A+ A GS++E + V + E
Sbjct: 201 QLAHIKHMEAIAEVD-ESERRREEDHSNSMYFCKESFRASIAAVGSILECVDAVLDEERK 259
Query: 133 --LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
+AFA++RPPGHHA P +A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 260 ERARNAFALIRPPGHHATPSQAAGFCIFNNVAIAAKYAMEK---YGLERILIVDWDVHHG 316
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N Q++F+ DP VL+ S+HRH+ G FYPAN+ GEG GLGY+IN+P+ +GR D
Sbjct: 317 NGIQEIFYSDPHVLYISLHRHDDGLFYPANEPKDVEDGGEGAGLGYSINIPFSHGRMSDN 376
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY + +++P+A ++ P ++I+S+GFDAA GD LGG ++ Y+ + +L A+G+
Sbjct: 377 DYRMAFTKVVMPIAYEYSPQLVIVSSGFDAAYGDILGGYELSAQCYAQLTYQLGALAKGR 436
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLE-------------DKPVAGSSEAYPFESTWRVI 357
I++ALEGGY+L + + A + LL+ K +S S W I
Sbjct: 437 IIVALEGGYSLTVLQDCAEAVVKTLLDRCLPLVSPAPLSCTKTCTKTSRTVVRRSAWDTI 496
Query: 358 QAVRKKLSAFWPTL----------ADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEA 407
+ V S +W L A ELP + P ++S + DE E+ A
Sbjct: 497 RRVCLYQSQYWACLNGLQMKLIKGAVELP----EVSPEPEVLLSKTKLRDESESDESTLA 552
Query: 408 VLQVALSKLKVDDGH 422
V S K+ H
Sbjct: 553 SESVQPSTEKMAKQH 567
>gi|21554265|gb|AAM63340.1| histone deacetylase, putative [Arabidopsis thaliana]
Length = 552
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/375 (44%), Positives = 217/375 (57%), Gaps = 27/375 (7%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + H E P+R++AI L AG+ P RC+ +NA+E + L VHT
Sbjct: 154 FDERMLLHSEFEVKAQPHTERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHT 213
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
HV+ + D+ + S S Y NE S+ AA LAAG ++A + G +
Sbjct: 214 SEHVDAV--------DTTSQLLYSYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVK 265
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ FA+VRPPGHHA AMGFCL+NN AVAA + K+LIVDWDVHHGN TQ
Sbjct: 266 NGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAK----KVLIVDWDVHHGNGTQ 321
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
++F ++ VL+ S+HRHE G FYP G +G G GY +NVPW G GD DY+
Sbjct: 322 EIFEQNKSVLYISLHRHEGGNFYPGT--GAADEVGSNGGEGYCVNVPWSCGGVGDKDYIF 379
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H++LP+A F PD +IISAGFDAA GDPLG C VTP GYS M + L D GK+++
Sbjct: 380 AFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVI 439
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV--IQAVRKKLS---AFWP 369
LEGGYNL SIS S A + VLL + P P +T V +Q V L+ FWP
Sbjct: 440 LEGGYNLRSISASATAVIKVLLGENP----ENELPIATTPSVAGLQTVLDVLNIQLEFWP 495
Query: 370 TLADELPTKLTSLKA 384
+LA L+ L+A
Sbjct: 496 SLAISYSKLLSELEA 510
>gi|444316756|ref|XP_004179035.1| hypothetical protein TBLA_0B06950 [Tetrapisispora blattae CBS 6284]
gi|387512075|emb|CCH59516.1| hypothetical protein TBLA_0B06950 [Tetrapisispora blattae CBS 6284]
Length = 795
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 199/347 (57%), Gaps = 24/347 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDY------HPENPNRIKAIWNKLQAAG------------IPQ 55
+ GL YD RM H Y HPE+P RI I+ L G I
Sbjct: 58 KTGLCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDNIGD 117
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN--SIYLNEGSSEA 113
+ L +EA +L VH+ H ++ S+ D+R + N S+Y N S ++
Sbjct: 118 LMLKLPIREATMNEILEVHSIEHFKYLEKTSN---DNREQLLKETENGDSVYFNNDSFQS 174
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A L+ G IE + V EG + +A A+VRPPGHH+EP+ A GFCL++NVAVA +L P
Sbjct: 175 AKLSCGGAIEACKAVVEGRVKNAMAVVRPPGHHSEPESAGGFCLFSNVAVATKNILKNYP 234
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + K+LI+DWD+HHGN TQK F+ D VL+ S+HR E G +YP G Y GEG G
Sbjct: 235 E-SVRKVLILDWDIHHGNGTQKAFYNDDNVLYISLHRFELGKYYPGTIQGQYDQTGEGKG 293
Query: 234 LGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTP 293
G+N N+ W G GDA+Y+ ++ +++P++++F PD++IIS+GFDAA GD +G C V+P
Sbjct: 294 EGFNCNITWPIGAVGDAEYMWAFEQVVMPMSREFQPDLVIISSGFDAADGDTIGQCHVSP 353
Query: 294 YGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
Y M L A+G + + LEGGYNL +I+ S L+ +L+ + P
Sbjct: 354 SCYGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVSKILIGEPP 400
>gi|302845232|ref|XP_002954155.1| hypothetical protein VOLCADRAFT_106247 [Volvox carteri f.
nagariensis]
gi|300260654|gb|EFJ44872.1| hypothetical protein VOLCADRAFT_106247 [Volvox carteri f.
nagariensis]
Length = 989
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/351 (40%), Positives = 197/351 (56%), Gaps = 32/351 (9%)
Query: 15 VGLLYDERMCKHNTPD------GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
V L YD++ +H G HPE P R+ AI KLQ +GI +RC ++A
Sbjct: 568 VLLAYDDQCRRHRDEKTLGSFIGHTHPERPARVAAIMAKLQESGILKRCKRYKGRDATRD 627
Query: 69 NLLSVHTENHVNLIKNISS------------------KQFDSRRDRIASKLNSIYLNEGS 110
LL+VH + ++ ++ + Q ++ R + + +Y N +
Sbjct: 628 ELLAVHNKALLDAVEKATQVAVLAAERDKTTWYGPLDAQLEAMEARGSKHIRDVYFNPST 687
Query: 111 SEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLN 170
+ A LAAGS EVA RV G AI+RPPGHHAE AMGFC YNN AVAA
Sbjct: 688 AACARLAAGSAAEVARRVVSGSARHGAAIIRPPGHHAESSVAMGFCYYNNAAVAARAAQA 747
Query: 171 ERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGE 230
G ++LI+DWDVHHGN TQ++F++DP V++ S HR++ FYP G T G
Sbjct: 748 ----AGAKRVLIMDWDVHHGNGTQEIFYEDPSVMYISTHRYDSSCFYPGT--GGLTETGS 801
Query: 231 GPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCR 290
GPGLG+ +NVPW DAD LA + H+++P+A +F PD++I+SAGFDAA GDPLGGCR
Sbjct: 802 GPGLGFTVNVPWNGSGVRDADMLAAFRHVVVPLATEFRPDVVIVSAGFDAAEGDPLGGCR 861
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPV 341
V+ +S L A V+ LEGGYNL + + + AC+ VLL + P+
Sbjct: 862 VSTAAFSHFAAMLSALA--PTVMLLEGGYNLIATAAATEACLRVLLGEPPL 910
>gi|312095682|ref|XP_003148434.1| histone deacetylase 7A [Loa loa]
Length = 616
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 215/381 (56%), Gaps = 26/381 (6%)
Query: 1 MEVKSGEGRTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCV 58
+ ++SG + + + GL+YD M +H G+ H E+ R+++IW++LQ G+ ++C
Sbjct: 238 LRLQSGSVLSTQLKTGLVYDPAMARHQCFCGNNRNHVEHGERVQSIWSRLQERGLVEKCE 297
Query: 59 VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL------------NSIYL 106
+ A++A + L +VH +V + ++ K + Y
Sbjct: 298 RVFARKAPLEMLRTVHAPTYVTFFAVSPTACLKMEPSQLPVKSFVQLSCGGIGVDSDTYF 357
Query: 107 NEGSSE-AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA 165
N+ S++ AA +A GS+ E+A +VAE L + FA +RPPGHHAE ++AMGFC NNVA+A
Sbjct: 358 NDASTQLAARIAVGSLAELALQVAESRLRNGFACIRPPGHHAEYNQAMGFCFLNNVAIAV 417
Query: 166 SFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFY 225
+ L +R ++I I+DWDVHHGN TQ F DP VL+ S+HRH+ G F+P G
Sbjct: 418 KY-LQQRCAEQCSRIAIIDWDVHHGNGTQICFEADPSVLYLSLHRHDNGNFFPGT--GAV 474
Query: 226 TMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG-- 283
T +G G G GY +N+P+ DADYLA W I+ P+ +F P II+SAGFDAA G
Sbjct: 475 TEVGVGSGKGYTVNIPFSGEMMDDADYLAAWRVIVAPILNEFKPTFIIVSAGFDAACGHS 534
Query: 284 DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG 343
LGG ++P + ++LM++A G++VLALEGGYNL +IS+S C+ L P
Sbjct: 535 QALGGYNLSPQLFGYFTRQLMNYAGGRVVLALEGGYNLDTISDSAEECVKALCGGSPETT 594
Query: 344 SS------EAYPFESTWRVIQ 358
A+P +S IQ
Sbjct: 595 GKLSDKALNAFPKQSAQETIQ 615
>gi|449442727|ref|XP_004139132.1| PREDICTED: histone deacetylase 15-like [Cucumis sativus]
Length = 600
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 209/370 (56%), Gaps = 23/370 (6%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + HPE P+R++AI L AGI P +C + A+E + L VH+
Sbjct: 197 FDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPGKCYPIPAREITKEELEMVHS 256
Query: 76 ENHVNLIK---NISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
++ ++ N+ S F Y N+ S++AA LAAG ++A + G
Sbjct: 257 LENIQAVEVTSNVISCYFTP----------DTYANKHSAQAARLAAGLCADLASEIVSGR 306
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ FA+VRPPGHHA +AMGFCL+NN AV+A + K+LIVDWDVHHGN
Sbjct: 307 AKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAK----KVLIVDWDVHHGNG 362
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F ++ VL+ S+HRHEFG FYP G +G GY +NVPW GD DY
Sbjct: 363 TQEIFEQNKSVLYISLHRHEFGRFYPGT--GAADEVGTMGAEGYCVNVPWSRSGVGDNDY 420
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ + ++LP+A F PD+ IISAGFDAA GDPLG C VTP GY+ M L + GK++
Sbjct: 421 IFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPTGYAQMTHLLNTVSGGKLL 480
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
+ LEGGYNL SIS+S A + VLL + P + P + + + V FWP L
Sbjct: 481 VILEGGYNLRSISSSATAVIKVLLGESPECDLDDHLPSSAGMKTVLDVLAIQKNFWPVLE 540
Query: 373 DELPTKLTSL 382
+KL S+
Sbjct: 541 SSF-SKLQSM 549
>gi|341038789|gb|EGS23781.1| hypothetical protein CTHT_0004840 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 751
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/362 (40%), Positives = 205/362 (56%), Gaps = 35/362 (9%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----------- 53
RR GLL YD+RM H D +HPE+P+RI+ I + AG+
Sbjct: 71 RRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEHIMQTFKKAGLVFTGSDAELAR 130
Query: 54 -----PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA---SKLNSI 104
P + + + A+ A + + VH H ++ +S K R A +S+
Sbjct: 131 IIKTEPTKYMWRIPARPATKEEICMVHHPRHYLWVEELSRKSTQELRHLSAIMDQGRDSL 190
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y+ + EA+ ++AG IE + V G + +AFAI+RPPGHHAE D+ MGFCL+NNV +A
Sbjct: 191 YVGSMTYEASLISAGGAIETCKSVVTGVVKNAFAIIRPPGHHAEYDQPMGFCLFNNVPIA 250
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA----- 219
A + P+L KILI+DWDVHHGN Q +F+ DP +L+ S+H + G FYP
Sbjct: 251 AKICQADYPDL-CRKILILDWDVHHGNGIQNLFYDDPNILYISLHVYRNGEFYPGKPDNP 309
Query: 220 -NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
DG G GPGLG N+N+ W + GD +Y+A + I++P+A +F PD++IISAGF
Sbjct: 310 MTPDGGIEHCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFNPDLVIISAGF 369
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
DAAAGD LG C VTP Y+ M LM A GK+ + LEGGY+L +IS S LA L+ +
Sbjct: 370 DAAAGDELGACFVTPACYAHMTHMLMSLAGGKVAVCLEGGYDLEAISKSALAVAQTLMGE 429
Query: 339 KP 340
P
Sbjct: 430 PP 431
>gi|297830512|ref|XP_002883138.1| hypothetical protein ARALYDRAFT_479356 [Arabidopsis lyrata subsp.
lyrata]
gi|297328978|gb|EFH59397.1| hypothetical protein ARALYDRAFT_479356 [Arabidopsis lyrata subsp.
lyrata]
Length = 552
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 213/370 (57%), Gaps = 17/370 (4%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + HPE P+R++AI L AG+ P RC+ +NA+E + L VHT
Sbjct: 154 FDERMLLHSEFEVKPHPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHT 213
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
HV+ + S + + + Y NE S+ AA LAAG ++A + G + +
Sbjct: 214 SEHVDAVNTTSQLLY-------SYFTSDTYANEYSARAARLAAGLCADLATEIFTGRVKN 266
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
FA+VRPPGHHA AMGFCL+NN AVAA + K+LIVDWDVHHGN TQ+
Sbjct: 267 GFALVRPPGHHAGIRHAMGFCLHNNAAVAALVAQAAGAK----KVLIVDWDVHHGNGTQE 322
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
+F ++ VL+ S+HRHE G FYP G +G G GY +NVPW G GD DY+
Sbjct: 323 IFEQNKSVLYISLHRHEGGHFYPGT--GAADEVGTNGGEGYCVNVPWSCGGVGDKDYIFA 380
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLAL 315
+ H++LP+A F PD +IISAGFDAA GDPLG C VTP GYS M + L D GK+++ L
Sbjct: 381 FQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVIL 440
Query: 316 EGGYNLGSISNSVLACMNVLLEDKPVAG-SSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
EGGYNL SIS+S A + VLL + P A P + + V FWP+LA
Sbjct: 441 EGGYNLRSISSSATAVIKVLLGEIPENNLPIAATPSREGLQTVLDVMNIQMKFWPSLAIS 500
Query: 375 LPTKLTSLKA 384
L+ +A
Sbjct: 501 YSKLLSEWEA 510
>gi|449300246|gb|EMC96258.1| hypothetical protein BAUCODRAFT_69749 [Baudoinia compniacensis UAMH
10762]
Length = 819
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 221/399 (55%), Gaps = 29/399 (7%)
Query: 14 RVGLLYDERM---CKHNTPDGDYHPENPNRIKAIWNKLQAAGIP--QRCVV--------L 60
+ GL+YD RM C+ N + D HPE+P RI AI+ AG+ +R +
Sbjct: 74 QTGLVYDVRMRFHCEVNPAEDDVHPEDPRRIHAIFEAFVQAGLAWAKRFGTFSNFYMGRI 133
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA----SKLNSIYLNEGSSEAAYL 116
+A+ + + VH E H + I+ +S++ + D + +L+SIY++ + A L
Sbjct: 134 DARLVTKEEVCLVHAERHWDWIQTLSTRSPEELEDLVQHPGQRQLDSIYISPNTPFCAAL 193
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
+AG IE V ++ +AFA++RPPGHHAE ++ GFC Y+NV++A E E
Sbjct: 194 SAGGAIEACRAVMLSKVKNAFAVIRPPGHHAEREDVKGFCFYDNVSIATRVCQREFGER- 252
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAN---DD----GFYTMIG 229
K+ I+DWDVHHGN Q+ + D VL+ S+H H+ G FYP D+ G + G
Sbjct: 253 CRKVFILDWDVHHGNGIQQATYDDQNVLYISLHVHKSGNFYPERSYRDERGPYGDHLHCG 312
Query: 230 EGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGC 289
LG N+N+PW N GDADY+ + +++P+A +F PD++II+AGFDAA GD LGGC
Sbjct: 313 GDTALGRNVNIPWRNYGMGDADYIYAFQQVVMPIATEFEPDLVIIAAGFDAAEGDMLGGC 372
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP 349
VTP GY+ M LM AQGK+ + LEGGYNL SI+ S A L+ + P + P
Sbjct: 373 FVTPAGYAHMTHMLMSLAQGKVAVCLEGGYNLQSIARSACAVGRTLMGEPP-DRLTNLNP 431
Query: 350 FESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAH 388
S ++ V ++ S FW L P L++ A P H
Sbjct: 432 TRSGVEDVKMVARQQSKFWSCL---YPKDLSAQLAGPLH 467
>gi|193785883|dbj|BAG54670.1| unnamed protein product [Homo sapiens]
Length = 425
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/424 (37%), Positives = 239/424 (56%), Gaps = 41/424 (9%)
Query: 23 MCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVN 80
M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L SVH+E HV
Sbjct: 1 MLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVL 60
Query: 81 LIKNISSKQFDSRRDRIASKL-----------------NSIYLNEGSSEAAYLAAGSVIE 123
L + ++A L ++I+ SS AA AAGSV +
Sbjct: 61 LYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTD 120
Query: 124 VAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIV 183
+A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L + +KILIV
Sbjct: 121 LAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKA---SKILIV 177
Query: 184 DWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE 243
DWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G+N+NV W
Sbjct: 178 DWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWA 235
Query: 244 NGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYSV 298
G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG V+ +
Sbjct: 236 GGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGY 295
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY---PFESTWR 355
M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S E + P + R
Sbjct: 296 MTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIR 355
Query: 356 VIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVALSK 415
++AV + S +W + +L S + +D E+ VE + A+ +++
Sbjct: 356 SLEAVIRVHSKYWGCM-----QRLASCPDSWVPRVPGADKEE----VEAVTALASLSVGI 406
Query: 416 LKVD 419
L D
Sbjct: 407 LAED 410
>gi|453087678|gb|EMF15719.1| Arginase/deacetylase [Mycosphaerella populorum SO2202]
Length = 816
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 214/382 (56%), Gaps = 26/382 (6%)
Query: 14 RVGLLYDERMCKH---NTPDGDYHPENPNRIKAIWNKLQAAGIPQR-----------CVV 59
+ GL+YD RM H P+ D HPE+P RI AI+ AG+ R
Sbjct: 99 QTGLVYDVRMRFHVEAEPPEDDLHPEDPRRIHAIFEAFVNAGLAWREGESGPVNDHYMGR 158
Query: 60 LNAKEAKDKNLLSVHTENH---VNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYL 116
++A+ + VHT NH V + +S+++ + +SIYL+ + A L
Sbjct: 159 IDARMVTRDEVCLVHTLNHWHWVQSLSVLSTEELGNELQHPPHGNDSIYLSNSTPYCAAL 218
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
+AG IE + G++ + FA++RPPGHHAE ++A GFC Y+NV++A E +
Sbjct: 219 SAGGAIEACRAIILGKVKNVFAVIRPPGHHAEREDAKGFCFYDNVSIATKACQREFKD-S 277
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAN---DD----GFYTMIG 229
K+ I+DWDVHHGN Q+ + DP VL+ S+H H+ G FYP + D+ G + G
Sbjct: 278 CRKVFILDWDVHHGNGIQQANYDDPNVLYVSLHVHKRGNFYPEHSYRDNRVSYGDHLHCG 337
Query: 230 EGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGC 289
EG GLG N+N+PW GDADYL + +++P+A +F PD++II+AGFDAA GD LGGC
Sbjct: 338 EGAGLGKNVNIPWTKQGMGDADYLYAFQQVVMPIATEFDPDLVIIAAGFDAAEGDMLGGC 397
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP 349
+VTP GY+ M LM A GK+ + LEGGYNL SI+ S A L+ + P ++
Sbjct: 398 KVTPAGYAHMTHMLMSLADGKMAVCLEGGYNLESIARSATAVARTLMGEPP-DRLTQTVA 456
Query: 350 FESTWRVIQAVRKKLSAFWPTL 371
S ++ V ++ S FW +L
Sbjct: 457 SVSGIDDVKLVARQQSKFWTSL 478
>gi|358396184|gb|EHK45565.1| hypothetical protein TRIATDRAFT_39952 [Trichoderma atroviride IMI
206040]
Length = 724
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/355 (40%), Positives = 198/355 (55%), Gaps = 30/355 (8%)
Query: 15 VGLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAG------------IPQRCVV 59
G YD+RM H D +HPE+P RI I+ + G I + C
Sbjct: 54 TGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKKMGLVYTGPESELPRIMKDCPT 113
Query: 60 -----LNAKEAKDKNLLSVHTENH---VNLIKNISSKQFDSRRDRIASKLNSIYLNEGSS 111
+ A+ A + + H+ H V + IS+ + R S+Y+ S
Sbjct: 114 KYMWRIPARPATREEICLAHSPEHLAWVEGLDTISTAELRELTRRFDQGRESLYVGSMSY 173
Query: 112 EAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNE 171
AA L+ G IE + V ++ +AFA++RPPGHHAE D+ MGFC +NNV VA +
Sbjct: 174 PAALLSVGGAIETCKCVVTEQVKNAFAVIRPPGHHAEFDQPMGFCFFNNVPVAIRVCQQD 233
Query: 172 RPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA------NDDGFY 225
PE K+LI+DWDVHHGN TQ +F++DP VL+ S+H ++ G FYP DG
Sbjct: 234 YPE-QCRKVLILDWDVHHGNGTQNIFYQDPNVLYISIHVYQNGMFYPGKPPNPMTPDGGI 292
Query: 226 TMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP 285
G GPGLG NIN+ W + GD +Y+A + I++P+AK+F PD+++ISAGFDAA GD
Sbjct: 293 EHCGTGPGLGKNINIGWHDQGMGDGEYMAAFQKIVMPIAKEFNPDLVVISAGFDAADGDE 352
Query: 286 LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
LGGC VTP Y+ M LM A GK+V+ LEGGYNL +IS+S +A L+ + P
Sbjct: 353 LGGCFVTPACYAHMTHMLMSLADGKVVVCLEGGYNLQAISSSAVAVARTLMGEPP 407
>gi|402084204|gb|EJT79222.1| histone deacetylase HDA1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 758
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 218/395 (55%), Gaps = 35/395 (8%)
Query: 11 IKRR----VGLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGIPQR------C 57
++RR G YD+RM H+ D +HPE+P+RI+ I+ L+ A + R
Sbjct: 72 MRRRGQLPTGCCYDDRMKLHSNADFGSSPHHPEDPSRIEEIFKTLKRANLIFRGSDAELV 131
Query: 58 VVLN-----------AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRD---RIASKLNS 103
VL A+EA + + H H +++++ R+ R+ S
Sbjct: 132 EVLQTNPNAYLWRIPAREASREEICLAHDPKHYAWVQSLADTPTQELRELSRRLDQGRAS 191
Query: 104 IYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAV 163
+Y+ + EA+ ++AG IE + V GE+ +AFA++RPPGHHAE D MGFCL+NNV V
Sbjct: 192 LYVGSMTYEASLISAGGAIETCKAVVSGEVKNAFAVIRPPGHHAEWDAPMGFCLFNNVPV 251
Query: 164 AASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND-- 221
AA E P++ KILIVDWDVHHGN Q +F+ DP VL+ S H ++ G FYP
Sbjct: 252 AAKVCQKEFPDI-CRKILIVDWDVHHGNGIQNIFYDDPNVLYISTHVYDGGEFYPGRPEN 310
Query: 222 ----DGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAG 277
DG G+ GLG N+N+ W+ GD +Y+A + I++P+ ++F PD++IIS+G
Sbjct: 311 PSIPDGGIDKCGDRAGLGRNVNIGWDKQGMGDGEYMAAFQKIIMPIGREFDPDLVIISSG 370
Query: 278 FDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLE 337
FDAAAGD LGGC V+P Y+ M LM A GK+ + LEGGYNL +IS S L+ + L+
Sbjct: 371 FDAAAGDQLGGCFVSPECYAHMTHMLMSLAGGKVAVCLEGGYNLHAISQSALSVVRTLMG 430
Query: 338 DKPVAGSSEAYPF-ESTWRVIQAVRKKLSAFWPTL 371
+ P P R++ V+ + +W +
Sbjct: 431 EPPPRMPGGLPPINREAARLLSQVQACQAPYWDCM 465
>gi|441675782|ref|XP_004092626.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 6 [Nomascus
leucogenys]
Length = 981
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 207/363 (57%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 177 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 236
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 237 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 295
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+RPPGHHA+ G+C++N+VAVAA + + I ++LIVDWDVHHG TQ
Sbjct: 296 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKH---RIRRVLIVDWDVHHGQGTQ 352
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 353 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 412
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 413 AFLHVLLPVALEFQPHLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 472
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL +++ V A ++ LL D S P S + + L FW L
Sbjct: 473 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRS 532
Query: 375 LPT 377
T
Sbjct: 533 TET 535
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 3/156 (1%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+Y + M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 568 LQSRTGLVYHQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 627
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V+ ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 628 LTCHSAEYVDHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 685
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA 165
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA
Sbjct: 686 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA 721
>gi|449273275|gb|EMC82819.1| Histone deacetylase 4, partial [Columba livia]
Length = 1078
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 216/349 (61%), Gaps = 32/349 (9%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 644 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 703
Query: 73 VHTENHVNL--IKNISSKQFDSRR----------------DRIASKL--NSIYLNEGSSE 112
VH+E H L ++ ++ DS++ A+ L ++I+ SS
Sbjct: 704 VHSEAHTLLYGTNPLNRQKLDSKKLLGIIPWGRGVPFLTSSTPATVLSHDTIWNEVHSSG 763
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
AA LA G VIE+ +VA GEL + FA+VRPPGHHAE MGFC +N+VA+AA LL +R
Sbjct: 764 AARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK-LLQQR 822
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
L ++KILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G
Sbjct: 823 --LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGA 878
Query: 233 GLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLG 287
G+G+N+N+ + G GD +YL + +++P+A +F PD++++S+GFDA G PLG
Sbjct: 879 GVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLG 938
Query: 288 GCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
G ++ + + K+LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 939 GYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALL 987
>gi|344253414|gb|EGW09518.1| Histone deacetylase 7 [Cricetulus griseus]
Length = 424
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 221/376 (58%), Gaps = 32/376 (8%)
Query: 23 MCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVN 80
M KH GD HPE+ RI++IW++LQ G+ RC L ++A + L SVH+E HV
Sbjct: 1 MLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSRCECLRGRKASLEELQSVHSERHVL 60
Query: 81 LIKN--ISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAYLAAGSVIE 123
L +S + D+ + + ++I+ SS AA AAGSV +
Sbjct: 61 LYGTNPLSRLKLDNGKLTGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTD 120
Query: 124 VAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIV 183
+A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L + +KILIV
Sbjct: 121 LAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKA---SKILIV 177
Query: 184 DWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE 243
DWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G+N+NV W
Sbjct: 178 DWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGNGEGFNVNVAWA 235
Query: 244 NGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYSV 298
G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG V+ +
Sbjct: 236 GGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGY 295
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY---PFESTWR 355
M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S E + P + R
Sbjct: 296 MTQQLMTLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDLLSEEGWKQKPNPNAIR 355
Query: 356 VIQAVRKKLSAFWPTL 371
++AV + +W +
Sbjct: 356 SLEAVIRVHRKYWGCM 371
>gi|322694056|gb|EFY85896.1| putative histone deacetylase A [Metarhizium acridum CQMa 102]
Length = 737
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 146/393 (37%), Positives = 216/393 (54%), Gaps = 36/393 (9%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----------- 53
RR GLL YD+RM H D +HPE+P RI I+ + AG+
Sbjct: 48 RRRGLLPTGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKRAGLVYTGPEAELPK 107
Query: 54 -----PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNI---SSKQFDSRRDRIASKLNSI 104
P R + + A+ A + + H+ H+ ++++ S+ + R S+
Sbjct: 108 IIKECPTRYMWRIPARPATSQEICLAHSSEHMTWVEHLDKLSTAELRELTKRYDQGRESL 167
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y+ S AA L+AG I+ + V G++ +AFA++RPPGHHAE D MGFC +NNV VA
Sbjct: 168 YVGSMSYPAALLSAGGAIDTCKNVVAGQVKNAFAVIRPPGHHAEFDAPMGFCFFNNVPVA 227
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA----- 219
+ ++ K+L++DWDVHHGN Q +F++DP VL+ S+H ++ G FYP
Sbjct: 228 VRVCQQDYSDI-CRKVLVLDWDVHHGNGIQNIFYEDPNVLYISIHVYQNGHFYPGKPPNP 286
Query: 220 -NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
DG G GPGLG NIN+ W + GD +Y+A + I++P+AK+F PD+++ISAGF
Sbjct: 287 ETPDGGIENCGAGPGLGKNINIGWHDQGMGDGEYMAAFQKIIMPIAKEFNPDLVVISAGF 346
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
DAA GD LGGC VTP Y+ M LM A GK+ + LEGGYNL +IS+S +A L+ +
Sbjct: 347 DAADGDELGGCFVTPPCYAHMTHMLMSLADGKVAVCLEGGYNLSAISSSAVAVAQTLMGE 406
Query: 339 KPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
P + E+ R + V+ + +W +
Sbjct: 407 PPPKMTIPKLNKEAA-RTLAKVQAYQAPYWECM 438
>gi|358380999|gb|EHK18675.1| hypothetical protein TRIVIDRAFT_88835 [Trichoderma virens Gv29-8]
Length = 724
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 203/364 (55%), Gaps = 35/364 (9%)
Query: 11 IKRRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAG---------- 52
+K R GLL YD+RM H D +HPE+P RI I+ + G
Sbjct: 45 LKVRRGLLPTGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKKMGLVYTGPESEL 104
Query: 53 --IPQRCVV-----LNAKEAKDKNLLSVHTENH---VNLIKNISSKQFDSRRDRIASKLN 102
I + C + A+ A + + H+ +H V + IS+ + R
Sbjct: 105 PRIMKDCPTKYMWRIPARPATREEICLAHSPDHLAWVESLDTISTAELRELTRRFDQGRE 164
Query: 103 SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVA 162
S+Y+ S AA L+ G IE + V G++ +AFA++RPPGHHAE D+ MGFC +NNV
Sbjct: 165 SLYVGSMSYPAALLSVGGAIETCKSVVTGQVKNAFAVIRPPGHHAEFDQPMGFCFFNNVP 224
Query: 163 VAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA--- 219
VA + P+ K+LI+DWDVHHGN TQ +F++DP VL+ S+H ++ G FYP
Sbjct: 225 VAIRVCQQDYPD-QCRKVLILDWDVHHGNGTQNIFYEDPNVLYISIHVYQNGMFYPGKPP 283
Query: 220 ---NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISA 276
DG G G GLG NIN+ W + GD +Y+A + I++P+AK+F PD+++ISA
Sbjct: 284 NPMTPDGGIEHCGTGQGLGKNINIGWHDQGMGDGEYMAAFQKIVMPIAKEFNPDLVVISA 343
Query: 277 GFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
GFDAA GD LGGC VTP Y+ M LM A GK+ + LEGGYNL +IS+S +A L+
Sbjct: 344 GFDAADGDELGGCFVTPACYAHMTHMLMSLADGKVAVCLEGGYNLRAISSSAVAVARTLM 403
Query: 337 EDKP 340
+ P
Sbjct: 404 GEPP 407
>gi|324503375|gb|ADY41470.1| Histone deacetylase 6 [Ascaris suum]
Length = 847
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 235/433 (54%), Gaps = 37/433 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L YD R+ H H E P R I +L+ G+ +RC +L +EA L VH
Sbjct: 418 TALAYDPRVELHREEIDMAHVERPERTSMIAKRLRDTGLLRRCAILQPREATYDELRLVH 477
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE-- 132
H+ ++ I+ +S R R NS+Y + S A+ A GS++E + V + E
Sbjct: 478 QLAHIKHMEAIAEVD-ESERRREEDHSNSMYFCKESFRASIAAVGSILECVDAVLDEERK 536
Query: 133 --LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
+AFA++RPPGHHA P +A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 537 ERARNAFALIRPPGHHATPSQAAGFCIFNNVAIAAKYAMEK---YGLERILIVDWDVHHG 593
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N Q++F+ DP VL+ S+HRH+ G FYPAN+ GEG GLGY+IN+P+ +GR D
Sbjct: 594 NGIQEIFYSDPHVLYISLHRHDDGLFYPANEPKDVEDGGEGAGLGYSINIPFSHGRMSDN 653
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY + +++P+A ++ P ++I+S+GFDAA GD LGG ++ Y+ + +L A+G+
Sbjct: 654 DYRMAFTKVVMPIAYEYSPQLVIVSSGFDAAYGDILGGYELSAQCYAQLTYQLGALAKGR 713
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLED-------KPVA--GSSEAYPFESTWRVIQAVR 361
I++ALEGGY+L + + A + LL+ P++ +S S W I+ V
Sbjct: 714 IIVALEGGYSLTVLQDCAEAVVKTLLDRCLPLVSPAPLSCTKTSRTVVRRSAWDTIRRVC 773
Query: 362 KKLSAFWPTL----------ADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQV 411
S +W L A ELP + P ++S + DE E+ A
Sbjct: 774 LYQSQYWACLNGLQMKLIKGAVELP----EVSPEPEVLLSKTKLRDESESDESTLA---- 825
Query: 412 ALSKLKVDDGHAE 424
++++D G+ E
Sbjct: 826 --KRMRMDPGNWE 836
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 237/447 (53%), Gaps = 38/447 (8%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK-NL 70
K +GL ++ H+ D + E P+RI++I L+ +GI +C ++ D+ +L
Sbjct: 7 KTAIGLNVQQK--THSCNDAPGYVEGPSRIESIVAHLKQSGIWNQCNIIQEHFPIDEGDL 64
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
H +N+V + + +K + D +A+K +S+YL +G+ EAA A +A +A+
Sbjct: 65 RETHDQNYVRCVAELRNKSKKAL-DELANKFDSVYLCQGTYEAACEAVACTRNMAALIAK 123
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
++ + FA++RPPGHHA+ + A GFC++NNVA AA N G ++ILIVD+DVHHG
Sbjct: 124 RKIPNGFALIRPPGHHAQRNAANGFCVFNNVAQAAEEAYN----FGEDRILIVDFDVHHG 179
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
Q+ F+++ RV++ S+HR+E G F+P + + IG G+GYNIN+P CGDA
Sbjct: 180 QGVQQSFYEEKRVMYCSIHRYEDGKFWPHLAESNFDHIGVSSGVGYNINIPLNELGCGDA 239
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY+A++ +++ P+A + P ++++AG+DA GDP+G V+P ++ + L A GK
Sbjct: 240 DYMAIFWNVIWPIASTYRPHFVVVAAGYDACQGDPIGAMDVSPDLFAHFVYHLKGLAGGK 299
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST--------------WRV 356
I+L LE GYN +++ V C+ +LL + P P ST W+
Sbjct: 300 ILLCLEDGYNERNVALCVERCIRILLGEAPNPLPKLPSPKRSTIVSCLNVISMLLPHWQQ 359
Query: 357 ---IQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEAVLQVAL 413
AV L A W E+ APP S+D D+ T + QV++
Sbjct: 360 CFGFYAVDGTLHAGW-----EIHHPKNVFCAPPQRKRVSADRIDQST-------LPQVSV 407
Query: 414 SKLKVDDGHAELGMATPWRSELSKVDV 440
+ GH +A R EL + ++
Sbjct: 408 ETFPDEIGHVT-ALAYDPRVELHREEI 433
>gi|367054580|ref|XP_003657668.1| histone deacetylase-like protein [Thielavia terrestris NRRL 8126]
gi|347004934|gb|AEO71332.1| histone deacetylase-like protein [Thielavia terrestris NRRL 8126]
Length = 761
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 218/400 (54%), Gaps = 50/400 (12%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----------- 53
RR GLL YD+RM H D +HPE+P+RI+ I + AG+
Sbjct: 66 RRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIECIMKTFKQAGLVFTGSDAELIR 125
Query: 54 -----PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNIS----------SKQFDSRRDRI 97
P + + + A+ A + + +VH H ++ +S SK+ D RD
Sbjct: 126 IIQTEPTKYMWRIPARAATKEEICTVHHPAHYMWVEELSRMSTHELRKLSKEKDQGRD-- 183
Query: 98 ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCL 157
S+Y+ + EA+ ++AG IE + V G + +AFA++RPPGHHAE D MGFCL
Sbjct: 184 -----SLYVGSMTYEASLISAGGAIETCKSVVAGIVKNAFAVIRPPGHHAEFDTPMGFCL 238
Query: 158 YNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFY 217
+NNV +AA + P+L KILI+DWDVHHGN Q +F+ DP +L+ S+H + G FY
Sbjct: 239 FNNVPIAAKICQADYPDL-CRKILILDWDVHHGNGIQNLFYDDPNILYISLHVYRNGEFY 297
Query: 218 PANDD------GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
P D G G GPGLG N+N+ W + GD +Y+A + I++P+A +F PD+
Sbjct: 298 PGQPDNPMTPDGGLEHCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFNPDL 357
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLAC 331
+IISAGFDAAAGD LG C VTP Y+ M LM A GK+ + LEGGY+L +IS S LA
Sbjct: 358 VIISAGFDAAAGDELGACFVTPGCYAHMTHMLMSLAGGKVAVCLEGGYDLEAISKSALAV 417
Query: 332 MNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
L+ + P E+ +V+ V+ + +W +
Sbjct: 418 AQTLMGEPPPKMEIPRISREAA-KVLAKVQAYQAPYWECM 456
>gi|193785828|dbj|BAG51263.1| unnamed protein product [Homo sapiens]
Length = 817
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 183/293 (62%), Gaps = 13/293 (4%)
Query: 10 TIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A +
Sbjct: 476 VLQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAE 535
Query: 70 LLSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
LL+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 536 LLTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAV 593
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVD 184
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVD
Sbjct: 594 LSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQTISGHALRILIVD 647
Query: 185 WDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN 244
WDVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 648 WDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNG 707
Query: 245 GRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
R GDADYLA W ++LP+A +F P ++++SAGFDAA GDPLGGC+V+P GY+
Sbjct: 708 PRMGDADYLAAWHRLVLPIAYEFNPKLVLVSAGFDAARGDPLGGCQVSPEGYA 760
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 204/363 (56%), Gaps = 4/363 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 86 TGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 145
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 146 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 204
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ AI+ PPGHHA+ G+C++N+VAVAA + + I ++LIVDWD HHG TQ
Sbjct: 205 NGMAIIGPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLIVDWDAHHGQGTQ 261
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK++L+
Sbjct: 322 AFLHVLLPVALEFQPQLVLVAAGFDAPQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILS 381
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYNL +++ V A ++ LL D S P S + + FW L
Sbjct: 382 LEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEAPEPFWEVLVRS 441
Query: 375 LPT 377
T
Sbjct: 442 TET 444
>gi|33146793|dbj|BAC79741.1| putative histone deacetylase [Oryza sativa Japonica Group]
gi|50510096|dbj|BAD30767.1| putative histone deacetylase [Oryza sativa Japonica Group]
Length = 602
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 216/399 (54%), Gaps = 54/399 (13%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + + HPE P+R++AI L AAGI P +CV++ +E + LL VHT
Sbjct: 208 FDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPSKCVMVPPREITKEELLRVHT 267
Query: 76 ENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+H++ + KN+ F S Y N S+ AA LAAG ++A + G
Sbjct: 268 SDHIDSVEQTKNMLYSYFTS----------DTYANGHSACAAKLAAGICADLANLIVSGR 317
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + FA+VRPPGHHA +AMGFCL+NN AVAA + K+LIVDWDVHHGN
Sbjct: 318 VRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAK----KVLIVDWDVHHGNG 373
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F D VL+ S+HRHE G+FYP G +G G G+++N+PW G GD DY
Sbjct: 374 TQEIFDGDNSVLYISLHRHEDGSFYPGT--GAANEVGVMDGQGFSVNIPWSRGGVGDNDY 431
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCR---------------------- 290
+ + H++LP+A +F PDI IISAGFDAA GDPLG C
Sbjct: 432 IFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDKSLMILDFWCTLVPPNWLLRDE 491
Query: 291 ----------VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
VTP GYS M L +QGK+++ LEGGYNL SIS+S + VLL D P
Sbjct: 492 RSDFAEDFLLVTPAGYSRMASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLGDSP 551
Query: 341 VAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKL 379
V + P E + + V FWP L + L
Sbjct: 552 VYDTDATEPSEEGIQTVLQVLSIQQQFWPVLVPSFASVL 590
>gi|449493022|ref|XP_004175436.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 9 [Taeniopygia
guttata]
Length = 1230
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 212/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+Y HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 795 TGVVYDSLMLKHQCMCGNYTNHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQL 854
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEGS--------SEAAY----- 115
VH+E+H L ++ ++ D R+ ++ KL S+ G SE A+
Sbjct: 855 VHSEHHSLLYGTSPLNRQKLDPRKLLGSVSQKLFSLLPCGGLGVTSDIKWSEMAFSTCYS 914
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+ G ++ + V+EGE+ + FA+VRPPGHHAE AMGFC +N++A+ A +L R +L
Sbjct: 915 XSIGCSLKASFEVSEGEMGNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYL---RDKL 971
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G GPG G
Sbjct: 972 NIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGS--GAPNEVGSGPGEG 1029
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + +++P A +F P+I+++SAGFDA G PLGG +
Sbjct: 1030 YNINIAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYK 1089
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + K+L+ A G++VLALEGG++L +I ++ AC+N LL
Sbjct: 1090 VTAKCFGHLTKQLLKLADGRVVLALEGGHDLTAICDASEACINALL 1135
>gi|410965882|ref|XP_003989468.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 10 [Felis
catus]
Length = 733
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 215/371 (57%), Gaps = 12/371 (3%)
Query: 14 RVGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
R L+Y E M D + E P R+ A +L+ G+ QRC+ L A+EA + L
Sbjct: 2 RTALVYHEDMTAARLLWEDPECEIERPERLTAALERLRQWGLEQRCLQLAAREASEAELG 61
Query: 72 SVHTENHVNLIK---NISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
VH+ +V+L++ +S+++ + ++ + +++Y + + A LA G+ +++ + V
Sbjct: 62 LVHSPEYVSLLRGTQTLSTRELQA----LSGQYDAVYFHPSTFHCARLAVGAALQLVDAV 117
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
G +++ A+VRPPGHH + A GFC++NNVA+AA + G+++ILIVDWDVH
Sbjct: 118 LTGAVHNGLALVRPPGHHGQRAAANGFCVFNNVAIAAKYAKRRH---GLHRILIVDWDVH 174
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HG Q +F DP VL+FS HR+E G F+P + +G+G G G+ +N+PW G
Sbjct: 175 HGQGIQYIFEDDPSVLYFSWHRYEHGHFWPYLRESDADAVGQGQGRGFTVNLPWNQVGMG 234
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
+ADY+A + H+LLPVA +F P++++ISAGFD+A GDP G R TP +S + + L A
Sbjct: 235 NADYVAAFLHVLLPVAFEFDPELVLISAGFDSAIGDPEGQMRATPECFSHLTQLLQVLAG 294
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
G++ LEGGY+L S+S SV + LL D + S P S IQ+VR + W
Sbjct: 295 GRVCAVLEGGYHLESLSQSVCMVVKALLGDPALPLSGPMEPHHSALESIQSVRAAQAPHW 354
Query: 369 PTLADELPTKL 379
+L + T +
Sbjct: 355 KSLRQQGSTPI 365
>gi|225557260|gb|EEH05546.1| histone deacetylase hda1 [Ajellomyces capsulatus G186AR]
Length = 769
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 210/373 (56%), Gaps = 27/373 (7%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-----------IPQRCVVLN 61
GL YD RM H P D HPE+P RI I+ +L AG +PQ ++
Sbjct: 133 TGLCYDIRMRYHCEVKPTLDVHPEDPRRIYYIYKELCKAGLVDDPESSRPLVPQPLQRID 192
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAG 119
A+EA ++ + VH H + ++ S +F + IA +SIY N + +A L+ G
Sbjct: 193 AREATEEEISLVHDAEHYDFVQ---STKFMLEEELIALEHTRDSIYFNSLTFTSAVLSCG 249
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
IE V ++ +A A++RPPGHHAE ++ MGFCL+NNV VAA E + K
Sbjct: 250 GAIETCMAVVNRQVKNAIAVIRPPGHHAERNKTMGFCLFNNVCVAAKVCQKEFGD-KCRK 308
Query: 180 ILIVDW-DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNI 238
ILI+DW + GN QK F+ DP +L+ S+H + G+FYP + G + G G GLG NI
Sbjct: 309 ILILDWYENGLGNGIQKAFYDDPNILYISIHVYRDGSFYPGGEGGNWDRCGAGSGLGKNI 368
Query: 239 NVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSV 298
N+PW GD DY+ + +++P+A +F PD++IISAGFDAAAGD LGGC VTP Y+
Sbjct: 369 NIPWPTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYAH 428
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQ 358
M + LM+ A GK+ + LEGGYN SIS S LA L+ + P Y ++ + +
Sbjct: 429 MTRMLMNLAGGKVAVCLEGGYNFRSISKSALAVTRTLMGEPP----DRLYASSASRQAVN 484
Query: 359 AVRKKL---SAFW 368
V++ SA+W
Sbjct: 485 TVKRVAMIQSAYW 497
>gi|391338986|ref|XP_003743834.1| PREDICTED: histone deacetylase 4-like [Metaseiulus occidentalis]
Length = 1049
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 235/423 (55%), Gaps = 36/423 (8%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+YD M KH G++ HPE+ R++++W +LQ G+ QRC+ +++A L
Sbjct: 621 TALVYDSVMLKHQCLCGNFAQHPEHAGRLQSVWARLQETGLVQRCLRPRSRKASLDELQL 680
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL--------------NE-GSSEAAYLA 117
H+E + L+ + ++ S + NE ++ AA +A
Sbjct: 681 AHSEAYTLLLGANPLNRHKLEFQKLDLPFKSFLMLSCGGIGVDSDTTWNELHTASAARMA 740
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
AG VIE+A +VA G++ + FA+VRPPGHHAE +AMGFC +N++AVAA + +
Sbjct: 741 AGCVIELACKVAAGDVKNGFAVVRPPGHHAEHQQAMGFCFFNSLAVAAKKV---QQRFNF 797
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
+ILIVDWDVHHGN Q++F++DP VL+ S+HRH+ G F+P D +GE G G+N
Sbjct: 798 ERILIVDWDVHHGNGIQQIFYRDPHVLYISLHRHDDGNFFPGTGDPHE--VGEDDGRGFN 855
Query: 238 INVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVT 292
+N+ W G GDA+YLA + I++P+AK++ P +++++ GFDAA G PLGG V+
Sbjct: 856 VNIAWSGGLNPPMGDAEYLAAFRTIVMPIAKEYQPQLVMVACGFDAAKGHAAPLGGYDVS 915
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEA----Y 348
P + +M ++LM QGK+VLALEGGY+L S+ + A LL ++ + +E+
Sbjct: 916 PACFGLMTRQLMTICQGKLVLALEGGYDLPSVCDCSEAVTRALLGEEACSKVAESELARK 975
Query: 349 PFESTWRVIQAVRKKLSAFWPTLADELPT-KLTSLKAPPAHMISSSDSEDEDTKVETLEA 407
P + ++ V + +WP T +SL+A M + DSED + L
Sbjct: 976 PTATAIENLKRVAVIQAPYWPCTKQWAATIGCSSLEA----MQLTKDSEDTVNAMALLSV 1031
Query: 408 VLQ 410
Q
Sbjct: 1032 ARQ 1034
>gi|342885040|gb|EGU85150.1| hypothetical protein FOXB_04328 [Fusarium oxysporum Fo5176]
Length = 726
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 216/393 (54%), Gaps = 36/393 (9%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----------- 53
RR GLL YD+RM H D +HPE+P RI I+ + G+
Sbjct: 58 RRRGLLPTGCCYDDRMKLHMNADFSPNAHHPEDPRRIHEIFKAFKKVGLVYTGPEAELPR 117
Query: 54 -----PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKN---ISSKQFDSRRDRIASKLNSI 104
P R + + A+ A + + H +H + ++N ISS + + S+
Sbjct: 118 IMRECPTRYMWRIPARAATREEICLAHHPDHFSWVENLDKISSAELRELTRQYDQGRESL 177
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y+ S +AA L+AG IE + V G++ +AFA++RPPGHHAE D MGFC +NNV VA
Sbjct: 178 YVGSMSYQAALLSAGGAIETCKNVVTGQVKNAFAVIRPPGHHAEFDAPMGFCFFNNVPVA 237
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA---ND 221
+ P++ K+LI+DWDVHHGN Q +F++DP VL+ S+H ++ G FYP ND
Sbjct: 238 VRVCQQDYPDI-CRKVLILDWDVHHGNGVQNIFYQDPNVLYISLHVYQNGLFYPGKPPND 296
Query: 222 ---DGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
DG G GLG NIN+ W + GD +Y+A + I++P+AK+F PD+++ISAGF
Sbjct: 297 MTPDGGIDKCGTDAGLGKNINIGWHDQGMGDGEYMAAFQKIVMPIAKEFNPDLVVISAGF 356
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
DAA GD LGGC V+P Y+ M LM A GK+ + LEGGYNL +IS S +A L+ +
Sbjct: 357 DAADGDELGGCFVSPSCYAHMTHMLMSLADGKVAVCLEGGYNLKAISVSAVAVAKTLMGE 416
Query: 339 KPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
P E+ R++ V+ + +W +
Sbjct: 417 PPPKMEIPKINKEAA-RILAKVQAHQAPYWECM 448
>gi|378726611|gb|EHY53070.1| histone deacetylase 6/10 [Exophiala dermatitidis NIH/UT8656]
Length = 801
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 213/379 (56%), Gaps = 27/379 (7%)
Query: 15 VGLLYDERMCKHN----TPDGDYHPENPNRIKAIWNKLQAAGI------PQRCVV----L 60
GL YD+RM H T + HPE+P RI I+ +L AG+ P V +
Sbjct: 85 TGLCYDDRMRYHAEIAATSGENVHPEDPRRIYYIYKELCEAGLVDDKDCPPMVEVPLKRI 144
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIAS-KLNSIYLNEGSSEAAYLAAG 119
A+EA + L VHT H + +K+ + D D +++SIY N S ++ L+AG
Sbjct: 145 EAREATREECLLVHTPEHYDFVKSTADMSDDKLIDLSEDPEMDSIYFNALSFFSSKLSAG 204
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
+ IE V E+ +A A++RPPGHHAE D MGFCL+NNV++A+ N+ E G K
Sbjct: 205 AAIETCRAVVSREVKNAIAVIRPPGHHAEVDRTMGFCLFNNVSIASKVCQNDFGE-GCRK 263
Query: 180 ILIVDW----DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
ILIVDW ++ GN QK F+ +P VL+ S+H H G FYP+ ++G G G GLG
Sbjct: 264 ILIVDWWDLLNLTLGNGCQKAFYDNPNVLYISLHVHMNGMFYPSGNEGDMYHCGAGAGLG 323
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
N+N+PW GD DY+ + H+++P+A +F PD +++++GFDAAAGD LGGC V+P
Sbjct: 324 KNVNIPWPTKGMGDGDYMYAFQHVVMPIATEFDPDFVVVASGFDAAAGDELGGCFVSPPC 383
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP---VAGSSEAYPFES 352
Y+ M L A GKI + LEGGYN +IS S LA L+ + P VA ++ S
Sbjct: 384 YAHMTHMLKSLAGGKIAVCLEGGYNFRAISKSALAVTRTLMGEPPDRLVATAATV----S 439
Query: 353 TWRVIQAVRKKLSAFWPTL 371
+ VR S +W ++
Sbjct: 440 AVDTVNKVRNVQSRYWRSI 458
>gi|320170511|gb|EFW47410.1| histone deacetylase [Capsaspora owczarzaki ATCC 30864]
Length = 1496
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 203/346 (58%), Gaps = 15/346 (4%)
Query: 12 KRRVGLLYDERMCKHNTP---DGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
K R L+YD M H HPE P+R+ I + + G RC ++EA
Sbjct: 1085 KSRTALIYDRGMLSHRCSCDSKRHVHPEQPDRLARILRAMDSEGFLDRCARPFSREAATD 1144
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIASK---LNSIYLNEGSSEAAYLAAGSVIEVA 125
L VH HV I S D K ++++ + + AA L++G ++++
Sbjct: 1145 ELAQVHQLAHVEHYGFIGSAPPDLETMECGGKGVACDTVFNSATTGRAARLSSGCLLQLT 1204
Query: 126 ERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
V + E+ + FA++RPPGHHAE +EAMGF +NNV++AA+ G+ +ILIVDW
Sbjct: 1205 SLVIQNEIVNGFAVIRPPGHHAEANEAMGFSFFNNVSIAAAAAKAH----GMKRILIVDW 1260
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE-N 244
D+HHGN TQ +F+ DP VL+ S+HRH+ G FYP D G G G+G N+N+PW N
Sbjct: 1261 DIHHGNGTQNIFYNDPSVLYLSLHRHDDGNFYPYTGDA--DECGAGEGVGKNVNIPWRGN 1318
Query: 245 GRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM 304
G G+ +YLA + ++++P+A+ F P+++ ISAGFDAA GD +G +VTP G++ M L
Sbjct: 1319 GAMGNNEYLAAFYYVVMPIARQFNPELVFISAGFDAAEGDLIGNYKVTPAGFARMTAWLK 1378
Query: 305 DFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK--PVAGSSEAY 348
+ A GK++LALEGGY+L S+S AC+ VLL ++ P+ SS Y
Sbjct: 1379 ELAGGKVILALEGGYDLNSLSTCATACIRVLLGEQPPPIPPSSNQY 1424
>gi|341884216|gb|EGT40151.1| hypothetical protein CAEBREN_23214 [Caenorhabditis brenneri]
Length = 1054
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 192/313 (61%), Gaps = 6/313 (1%)
Query: 26 HNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA-KEAKDKNLLSVHTENHVNLIKN 84
H+ + D HPE P R + I L+ +G+ RCV N+ + A D+ + VHT+ ++ +K
Sbjct: 439 HDLEEEDRHPEKPARTRRILKTLKESGVLDRCVERNSERSATDEEIRMVHTKKMLDHLKT 498
Query: 85 ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE--GELNSAFAIVRP 142
S + + + + NSI+L + + + A A G+V++ + + E L +A IVRP
Sbjct: 499 TESMKEEELMEEAQKEFNSIFLTQDTLKVARKAIGAVLQSVDEIFEKPAGLRNALVIVRP 558
Query: 143 PGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPR 202
PGHHA ++ GFC++NNVAVAA + I ++LI+DWDVHHGN TQ++F++D
Sbjct: 559 PGHHASASKSSGFCIFNNVAVAAKYAQRRH---KIKRVLILDWDVHHGNGTQEIFYEDGN 615
Query: 203 VLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLP 262
V++ S+HRH+ G FYP + Y +GEG G G +N+P+ GD +Y + ++LP
Sbjct: 616 VMYMSIHRHDKGNFYPVGEPKDYFDVGEGDGEGMTVNIPFSGAPMGDLEYQMAFQRVVLP 675
Query: 263 VAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLG 322
+A F P++++ISAGFDAA DPLG +VTP +++M +L A G+I+ LEGGYNL
Sbjct: 676 IAYQFKPELVLISAGFDAAIDDPLGEYKVTPETFALMTYQLSSLASGRIITVLEGGYNLT 735
Query: 323 SISNSVLACMNVL 335
SISNS LA VL
Sbjct: 736 SISNSALAVCEVL 748
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/381 (37%), Positives = 207/381 (54%), Gaps = 11/381 (2%)
Query: 7 EGRTIKRRVG---LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRC-VVLNA 62
E R R G + ++E +H+ HPE+P RI++I L + ++C VV +
Sbjct: 4 EDRQKSRTTGPTLVGFNESQSEHHNTVCKNHPESPGRIQSIKEVLTKTKVLEKCQVVTDF 63
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
E D +L H + + + I +K ++ +SIY+ E S +AA V
Sbjct: 64 LEIDDADLSITHEKEMIAKLMEIENKT-QEEINKECENFDSIYMTEKSQKAARDGVACVR 122
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E+ R+ E ++ FAI+RPPGHHA+ D GFC+YNN + AA G +ILI
Sbjct: 123 ELTNRIMANEASNGFAIIRPPGHHADRDNPSGFCIYNNASQAAEEAFFN----GAERILI 178
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VD DVHHGN TQ+MF+ D RVL FS+HR+E G ++P + + IG G G+GYN N+P
Sbjct: 179 VDLDVHHGNGTQRMFYHDKRVLVFSIHRYEHGLYWPHLRESNFDRIGSGQGIGYNANLPL 238
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
C D+DYL++ H+LLP+A F P +I+SAGFD+ AGDPLGG +TP YS +
Sbjct: 239 NEEGCTDSDYLSILFHVLLPLATQFDPHFVIVSAGFDSLAGDPLGGMLLTPDAYSHFIYH 298
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
L AQG++++ LEGGYN + + C+ VLL P EST +
Sbjct: 299 LKSLAQGRMLVVLEGGYNHQVSAVAAQKCIKVLLGHAPRPVDLTEPAKESTVMSCVNLVT 358
Query: 363 KLSAFWPTLADELPTKLTSLK 383
L ++W D P++ TSL+
Sbjct: 359 VLRSYWNCF-DYFPSR-TSLR 377
>gi|361128639|gb|EHL00569.1| putative Histone deacetylase clr3 [Glarea lozoyensis 74030]
Length = 514
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 193/320 (60%), Gaps = 13/320 (4%)
Query: 62 AKEAKDKNLLSVHTENH---VNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAA 118
A+EA+ + HT +H V + N SS + + S+Y+ + AA ++A
Sbjct: 125 AREARRDEICLAHTPSHYEWVRELDNKSSAELRAMTLAFDEGRKSLYVGNLTYLAALVSA 184
Query: 119 GSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN 178
G IE +RV EG+L +A A++RPPGHHAE +E+MGFC++NNV +AA + + PE+
Sbjct: 185 GGAIESCKRVVEGQLKNAIAVIRPPGHHAEHNESMGFCIFNNVPIAAKVCMQDYPEI-CR 243
Query: 179 KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD------GFYTMIGEGP 232
K+LI+DWDVHHGN Q +F+ DP VL+ S+H + G+FYP D G M+G GP
Sbjct: 244 KVLILDWDVHHGNGVQNIFYDDPNVLYISIHVYSDGSFYPGKGDDPDAPDGGIPMVGSGP 303
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G+G N+N+ W GD +Y+A + I++P+A++F PD++I+SAGFDAAAGD LGGC V+
Sbjct: 304 GVGKNVNIGWHAQGMGDGEYMAAFQRIVMPIAQEFDPDLVIVSAGFDAAAGDELGGCFVS 363
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPF-E 351
P YS M LM A GK+ + LEGGY+L +IS S LA L+ + P E P
Sbjct: 364 PACYSHMTHMLMSLANGKVAVCLEGGYDLTAISKSALAVTQTLMGEPP--ERMEIPPINH 421
Query: 352 STWRVIQAVRKKLSAFWPTL 371
+ ++ VR S +W +
Sbjct: 422 KASKDLEQVRAVQSRYWKCM 441
>gi|320594211|gb|EFX06614.1| histone deacetylase [Grosmannia clavigera kw1407]
Length = 1635
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 206/365 (56%), Gaps = 38/365 (10%)
Query: 11 IKRR----VGLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI---------- 53
KRR G YD+RM H D G +HPE+P RI I + AG+
Sbjct: 958 FKRRGLLPTGCCYDDRMKLHANADFGPGPHHPEDPARISEIMAAFKRAGLVYMGSEADLV 1017
Query: 54 ------PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL----- 101
P + + + ++A + +L VH H +K +S K R+ SKL
Sbjct: 1018 KIMRESPTKYMWRIATRDATKEEILLVHHPRHFYWVKELSVKPTYELRE--MSKLMDEGR 1075
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
+S+Y+ + EAA L+AG IE + V G++ +AFA++RPPGHHAE ++ MGFCL+NNV
Sbjct: 1076 DSLYVGSMTYEAALLSAGGAIETCKAVVRGDVKNAFAVIRPPGHHAEYNQPMGFCLFNNV 1135
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYP--- 218
++ E P++ K+LI+DWDVHHGN Q F++D VL+ S+H G FYP
Sbjct: 1136 PISVRVCQKEYPDV-CRKVLILDWDVHHGNGIQNTFYEDANVLYISLHVFLDGQFYPGTP 1194
Query: 219 ---ANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIIS 275
+ DG G GLG N+N+ W+N GDA+Y+A + I++P+A +F PD+ IIS
Sbjct: 1195 TNPSTPDGNIDKCGADAGLGRNVNIGWDNQGMGDAEYMAAFQKIVMPIASEFNPDLAIIS 1254
Query: 276 AGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
AGFDAAAGD LGGC VTP Y+ M +M A GK+ + LEGGYNL +IS S LA L
Sbjct: 1255 AGFDAAAGDELGGCFVTPACYAHMTHMMMSLAGGKLAVCLEGGYNLQAISASALAVARTL 1314
Query: 336 LEDKP 340
+ + P
Sbjct: 1315 MGEPP 1319
>gi|323331992|gb|EGA73404.1| Hda1p [Saccharomyces cerevisiae AWRI796]
Length = 641
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 193/323 (59%), Gaps = 18/323 (5%)
Query: 32 DYHPENPNRIKAIWNKLQAAGIPQRCVV------------LNAKEAKDKNLLSVHTENHV 79
D HPE+P RI I+ L G+ + + + A + +L VHT+ H+
Sbjct: 16 DPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEVHTKEHL 75
Query: 80 NLIKNISSKQFDSRRDRI--ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAF 137
I+ S + SR + + K +S+Y N S +A L G IE + V EG + ++
Sbjct: 76 EFIE---STEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEGRVKNSL 132
Query: 138 AIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMF 197
A+VRPPGHHAEP A GFCL++NVAVAA +L PE + +I+I+DWD+HHGN TQK F
Sbjct: 133 AVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPE-SVRRIMILDWDIHHGNGTQKSF 191
Query: 198 WKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWD 257
++D +VL+ S+HR E G +YP G Y GEG G G+N N+ W G GDA+Y+ ++
Sbjct: 192 YQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITWPVGGVGDAEYMWAFE 251
Query: 258 HILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEG 317
+++P+ ++F PD++IIS+GFDAA GD +G C VTP Y M L A+G + + LEG
Sbjct: 252 QVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLARGNLCVVLEG 311
Query: 318 GYNLGSISNSVLACMNVLLEDKP 340
GYNL +I+ S L+ VL+ + P
Sbjct: 312 GYNLDAIARSALSVAKVLIGEPP 334
>gi|341894557|gb|EGT50492.1| hypothetical protein CAEBREN_16084 [Caenorhabditis brenneri]
Length = 1061
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 192/313 (61%), Gaps = 6/313 (1%)
Query: 26 HNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA-KEAKDKNLLSVHTENHVNLIKN 84
H+ + D HPE P R + I L+ +G+ RCV N+ + A D+ + VHT+ ++ +K
Sbjct: 446 HDLEEEDRHPEKPARTRRILKTLKESGVLDRCVERNSERSATDEEIRMVHTKKMLDHLKT 505
Query: 85 ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE--GELNSAFAIVRP 142
S + + + + NSI+L + + + A A G+V++ + + E L +A IVRP
Sbjct: 506 TESMKEEELMEEAQKEFNSIFLTQDTLKVARKAIGAVLQSVDEIFEKPAGLRNALVIVRP 565
Query: 143 PGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPR 202
PGHHA ++ GFC++NNVAVAA + I ++LI+DWDVHHGN TQ++F++D
Sbjct: 566 PGHHASASKSSGFCIFNNVAVAAKYAQRRH---KIKRVLILDWDVHHGNGTQEIFYEDGN 622
Query: 203 VLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLP 262
V++ S+HRH+ G FYP + Y +GEG G G +N+P+ GD +Y + ++LP
Sbjct: 623 VMYMSIHRHDKGNFYPVGEPKDYFDVGEGDGEGMTVNIPFSGAPMGDLEYQMAFQRVVLP 682
Query: 263 VAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLG 322
+A F P++++ISAGFDAA DPLG +VTP +++M +L A G+++ LEGGYNL
Sbjct: 683 IAYQFKPELVLISAGFDAAIDDPLGEYKVTPETFALMTYQLSSLASGRVITVLEGGYNLT 742
Query: 323 SISNSVLACMNVL 335
SISNS LA VL
Sbjct: 743 SISNSALAVCEVL 755
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 193/339 (56%), Gaps = 11/339 (3%)
Query: 7 EGRTIKRRVG---LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRC-VVLNA 62
E R R G + ++E +H+ HPE+P RI++I L + ++C VV +
Sbjct: 4 EDRQKSRTTGPTLVGFNESQSEHHNTVCKDHPESPGRIQSIKEVLTKTKVLEKCQVVTDF 63
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
E D +L H + + + I +K ++ K +SIY+ E S +AA V
Sbjct: 64 LEIDDADLSITHEKEMIAKLMEIENKT-QEEINKECEKFDSIYMTEKSQKAARDGVACVR 122
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAA-SFLLNERPELGINKIL 181
E+ R+ E ++ FAI+RPPGHHA+ D GFC+YNN + AA N G +IL
Sbjct: 123 ELTNRIMANEASNGFAIIRPPGHHADRDNPSGFCIYNNASQAAEEAFFN-----GAERIL 177
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVD DVHHGN TQ+MF+ D RVL FS+HR+E G ++P + + IG G G+GYN N+P
Sbjct: 178 IVDLDVHHGNGTQRMFYHDKRVLVFSIHRYEHGLYWPHLRESNFDRIGSGQGIGYNANLP 237
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLK 301
C D+DYL++ H+LLP+A F P +I+SAGFD+ AGDPLGG +TP YS +
Sbjct: 238 LNEEGCTDSDYLSILFHVLLPLATQFDPHFVIVSAGFDSLAGDPLGGMLLTPDAYSHFIY 297
Query: 302 KLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
L AQG++++ LEGGYN + + C+ VLL P
Sbjct: 298 HLKSLAQGRMLVVLEGGYNHQVSAVAAQKCIKVLLGHAP 336
>gi|296192102|ref|XP_002743921.1| PREDICTED: histone deacetylase 10 [Callithrix jacchus]
Length = 811
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 214/355 (60%), Gaps = 13/355 (3%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
LL+D+ C+ E P R+ A ++L+ G+ QRC+ L+A+EA ++ L VH+
Sbjct: 16 LLWDDPECEI---------ERPERLTAALDRLRKCGLEQRCLRLSAREASEEELGLVHSP 66
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
+V+L++ + ++ + ++IY + + A LA G+ +++ + V G + +
Sbjct: 67 EYVSLVRE-TQVLGKEELQALSGQFDAIYFHPSTFHCARLAVGAALQLVDAVLTGVVQNG 125
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
FA+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++ILIVDWDVHHG Q +
Sbjct: 126 FALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILIVDWDVHHGQGIQYL 182
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A +
Sbjct: 183 FEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAF 242
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALE 316
H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++ LE
Sbjct: 243 LHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAMLE 302
Query: 317 GGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
GGY+L S++ SV + LL D S P +S IQ+VR + +W +L
Sbjct: 303 GGYHLESLAESVCMTVQTLLGDPAPPLSGPMVPCQSALESIQSVRATQAPYWKSL 357
>gi|281339512|gb|EFB15096.1| hypothetical protein PANDA_005509 [Ailuropoda melanoleuca]
Length = 663
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 210/363 (57%), Gaps = 6/363 (1%)
Query: 14 RVGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
R L+Y M D + E P R+ A +LQ G+ +RC+ L A+EA + L
Sbjct: 2 RTALVYHGEMTAARLLWEDPECEIERPERLTAALERLQQEGLERRCLQLAAREASEAELG 61
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VH+ +V+L++ S+ + R ++ + +++Y + + A LAAG+ +++ + V G
Sbjct: 62 LVHSPEYVSLLRGTSALGTEELRA-LSGQYDAVYFHPSTFHCARLAAGAALQLVDAVLTG 120
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
++ A+VRPPGHH++ A GFC++NNVA+AA + + G+++ILIVDWDVHHG
Sbjct: 121 AAHNGLALVRPPGHHSQRAAASGFCVFNNVALAAK---HAQQRHGLHRILIVDWDVHHGQ 177
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ +F DP VL+FS HR+E G F+P + IG G G G+ +N+PW G+AD
Sbjct: 178 GTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAIGRGQGRGFTVNLPWNQVGMGNAD 237
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
Y+A + H+LLPVA +F P++++ISAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 238 YMAAFLHVLLPVAFEFDPELVLISAGFDSAIGDPEGQMQATPECFAHLTQLLQGLAGGRV 297
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S+S SV + LL D S P S IQ+ R + W +L
Sbjct: 298 CAVLEGGYHLESLSQSVCMVVKALLGDPAPPLSGPMVPQHSALESIQSARAAQAPHWTSL 357
Query: 372 ADE 374
+
Sbjct: 358 RQQ 360
>gi|255955437|ref|XP_002568471.1| Pc21g14570 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590182|emb|CAP96354.1| Pc21g14570 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 767
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 213/376 (56%), Gaps = 28/376 (7%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----------PQRCVVLN 61
GL YD RM H P D HPE+P RI I+ +L AG+ P+ ++
Sbjct: 122 TGLCYDHRMRYHCEVCPQSDVHPEDPRRIYYIYKELCRAGLVDDPESSRPLAPKTLQRIH 181
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSK------QFDSRRDRIASKLNSIYLNEGSSEAAY 115
A+ A ++ + +H + H +++ + Q + RD SIY N + +A
Sbjct: 182 ARNATEEEVTLIHNDAHYAFVQSTTEMPNHVLIQLEKDRD-------SIYFNNLTFASAI 234
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G IE VA+ ++ +A A++RPPGHHAE D AMGFCL+NNV VAA N R
Sbjct: 235 LSTGGAIETCLTVAQRQVRNAIAVIRPPGHHAEDDAAMGFCLFNNVCVAARVCQN-RLGD 293
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
KI+I+DWDVHHGN QK F+ DP VL+ S+H ++ G FYP G + G G G+G
Sbjct: 294 ACRKIMILDWDVHHGNGIQKAFYDDPNVLYISMHVYQDGRFYPGGPAGDWDQCGSGAGVG 353
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
N+N+PW + GD DY+ + +++P+A++F PD++I++AGFDAAAGD LGGC V+P
Sbjct: 354 KNVNIPWPDQGMGDGDYMFAFQEVVMPIAQEFDPDLVIVAAGFDAAAGDVLGGCFVSPAC 413
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
Y+ M LM A GK+ + LEGGYN SIS S LA L+ + P S + P +S
Sbjct: 414 YAQMTHLLMTLANGKVAVCLEGGYNFKSISKSALAVTKTLMGEPPDRLLSSS-PTDSAVA 472
Query: 356 VIQAVRKKLSAFWPTL 371
++ VR S +W L
Sbjct: 473 AVRRVRSIQSQYWSRL 488
>gi|301763761|ref|XP_002917311.1| PREDICTED: histone deacetylase 10-like [Ailuropoda melanoleuca]
Length = 723
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 210/363 (57%), Gaps = 6/363 (1%)
Query: 14 RVGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
R L+Y M D + E P R+ A +LQ G+ +RC+ L A+EA + L
Sbjct: 2 RTALVYHGEMTAARLLWEDPECEIERPERLTAALERLQQEGLERRCLQLAAREASEAELG 61
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VH+ +V+L++ S+ + R ++ + +++Y + + A LAAG+ +++ + V G
Sbjct: 62 LVHSPEYVSLLRGTSALGTEELRA-LSGQYDAVYFHPSTFHCARLAAGAALQLVDAVLTG 120
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
++ A+VRPPGHH++ A GFC++NNVA+AA + + G+++ILIVDWDVHHG
Sbjct: 121 AAHNGLALVRPPGHHSQRAAASGFCVFNNVALAAK---HAQQRHGLHRILIVDWDVHHGQ 177
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ +F DP VL+FS HR+E G F+P + IG G G G+ +N+PW G+AD
Sbjct: 178 GTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAIGRGQGRGFTVNLPWNQVGMGNAD 237
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
Y+A + H+LLPVA +F P++++ISAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 238 YMAAFLHVLLPVAFEFDPELVLISAGFDSAIGDPEGQMQATPECFAHLTQLLQGLAGGRV 297
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S+S SV + LL D S P S IQ+ R + W +L
Sbjct: 298 CAVLEGGYHLESLSQSVCMVVKALLGDPAPPLSGPMVPQHSALESIQSARAAQAPHWTSL 357
Query: 372 ADE 374
+
Sbjct: 358 RQQ 360
>gi|109716222|gb|ABG43093.1| histone deacetylase HDAC4 [Triticum aestivum]
Length = 404
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 207/359 (57%), Gaps = 25/359 (6%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
LL+ E K N HPE PNR++AI L AAGI P +C ++ +E + L+ VHT
Sbjct: 2 LLHSEMEIKPNP-----HPERPNRLRAIAASLAAAGIFPSKCALVPPRETTKEELVMVHT 56
Query: 76 ENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+HV + KN+ F S Y N S+ AA LAAG ++A +
Sbjct: 57 SDHVESVEQTKNMLYSYFTS----------DTYANGHSACAAKLAAGLCADLASLMVSEH 106
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ FA+VRPPGHHA +AMGFCL+NN AVAA K+LIVDWDVHHGN
Sbjct: 107 FQNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAQKAG----AKKVLIVDWDVHHGNG 162
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F + VL+ S+HRHE G+FYP G +G G G+++N+PW G GD DY
Sbjct: 163 TQEIFEGNKSVLYISLHRHEDGSFYPGT--GAADEVGVLDGKGFSVNIPWSCGGVGDNDY 220
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ + H++LP+A +F PDI IISAGFDAA GDPLG C VTP GYS M L ++GK++
Sbjct: 221 IFAFQHVVLPIATEFAPDITIISAGFDAARGDPLGCCDVTPAGYSQMTSMLTACSEGKLL 280
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
+ LEGGYNL SIS+S + VLL D P G++ A P + + V +WP L
Sbjct: 281 VILEGGYNLRSISSSATEVVKVLLGDGPSYGTNAAAPSKEGMQTALQVLDIQQKYWPVL 339
>gi|425772727|gb|EKV11122.1| Histone deacetylase HdaA [Penicillium digitatum PHI26]
gi|425775146|gb|EKV13429.1| Histone deacetylase HdaA [Penicillium digitatum Pd1]
Length = 764
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 213/376 (56%), Gaps = 28/376 (7%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----------PQRCVVLN 61
GL YD RM H P D HPE+P RI I+ +L AG+ P +N
Sbjct: 121 TGLCYDHRMRYHCEVRPQSDVHPEDPRRIYYIYKELCRAGLVDDPESSRPLAPHTLQRIN 180
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSK------QFDSRRDRIASKLNSIYLNEGSSEAAY 115
A+ A ++ + +H + H +++ + Q + RD SIY N + +A
Sbjct: 181 ARNATEEEVTLIHNDAHYAFVRSTTDMPNEVLIQLEKDRD-------SIYFNNLTFASAI 233
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G IE VA+ ++ +A A++RPPGHHAE D AMGFCL+NNV VAA + +R
Sbjct: 234 LSTGGAIETCLAVAQRQVRNAIAVIRPPGHHAEDDAAMGFCLFNNVCVAAR-VCQKRLGD 292
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
KI+I+DWDVHHGN QK F+ DP VL+ S+H ++ G FYP G + G G G+G
Sbjct: 293 ACRKIMILDWDVHHGNGIQKAFYDDPNVLYISMHVYQNGRFYPGGPAGDWDHCGSGVGVG 352
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
N+N+PW + GD DY+ + +++P+A++F PD++I++AGFDAAAGD LGGC V+P
Sbjct: 353 KNVNIPWPDQGMGDGDYMFAFQEVVMPIAQEFDPDLVIVAAGFDAAAGDVLGGCFVSPAC 412
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR 355
Y+ M LM A GK+ + LEGGYN SIS S LA L+ + P S + P +S
Sbjct: 413 YAQMTHMLMTLANGKVAVCLEGGYNFKSISKSALAVTKTLMGEPPDRLLSSS-PTDSAVA 471
Query: 356 VIQAVRKKLSAFWPTL 371
++ VR S +W L
Sbjct: 472 AVRRVRSIQSQYWSRL 487
>gi|345776725|ref|XP_848669.2| PREDICTED: histone deacetylase 10 [Canis lupus familiaris]
Length = 932
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 214/366 (58%), Gaps = 12/366 (3%)
Query: 14 RVGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
R L+Y E M D + E P R+ A +LQ G+ QRC+ L +EA + L
Sbjct: 2 RTALVYHEDMTAARLLWEDPECEIERPERLTAALRRLQQGGLEQRCLQLAPREASEAELG 61
Query: 72 SVHTENHVNLIKNISSKQFDSRRDR-IASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
VH+ +V+L++ ++ D++ R ++ + +++Y + + A LA G+ +++ + V
Sbjct: 62 LVHSPEYVSLLRG--TQALDTQELRALSGQYDAVYFHPSTFHCARLAVGAALQLVDAVLM 119
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G +++ A+VRPPGHH++ A GFC++NNVA+AA + G+ +ILIVDWDVHHG
Sbjct: 120 GAVHNGLALVRPPGHHSQRAAANGFCVFNNVAIAARHAQQKH---GLQRILIVDWDVHHG 176
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
Q +F DP VL+FS HR+E G F+P + +G+G G G+ +N+PW G+A
Sbjct: 177 QGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNA 236
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA + H+LLPVA +F P+++++SAGFD+A GDP G + TP + + + L A G+
Sbjct: 237 DYLAAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQVLAGGR 296
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
+ LEGGY+L S+S SV + LL D P++G E P S IQ+VR + W
Sbjct: 297 VCAVLEGGYHLESLSQSVCMVVRALLGDPVPPLSGPME--PHRSALESIQSVRAAQAPHW 354
Query: 369 PTLADE 374
+L +
Sbjct: 355 TSLQQQ 360
>gi|47207616|emb|CAF88355.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1260
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 228/458 (49%), Gaps = 92/458 (20%)
Query: 5 SGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE 64
SG ++ GL+YDERM +H +HPE P RI I++K Q G+ RC + A+
Sbjct: 484 SGLAPSVAAATGLVYDERMMEHLNLWDRHHPEQPQRIFKIFSKHQELGLVDRCQRIPARL 543
Query: 65 AKDKNL---------LSVHTE--------------------------NHVNLIKNI---- 85
A ++ L LSV +E +H + + I
Sbjct: 544 ATEEELSMCHRSGSALSVGSEPFLLPLRARIISPLGLVWPLDRRLPTSHASCVCTINPGC 603
Query: 86 ----------SSKQFDSRR----------DRIASKLNSIYLNEGSSEAAYLAAGSVIEVA 125
S + + R R+ ++ NSIY+N S ++A LAAG
Sbjct: 604 VHFCVCVCVRSLQHVEQMRATATMKPRDLHRLGNEFNSIYINNQSFQSALLAAGGCFSAV 663
Query: 126 ERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
E++ G++ +A A+VRPPGHHAE D GFC +N A+AA + + ++LI+DW
Sbjct: 664 EQILAGQVRNAVAVVRPPGHHAERDLPCGFCFFNTAALAARHAQKLSRDAPL-RVLILDW 722
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF D VL+ S+HR++ G F+P+++D +G G GYN+N+ W G
Sbjct: 723 DVHHGNGTQHMFEDDDSVLYISLHRYDNGAFFPSSEDAAPDRVGVSKGAGYNVNIAWSGG 782
Query: 246 RCGDADYLAVWDHILLPVAKD-------------------------------FGPDIIII 274
R GD DYLA + H+++P+A + F P ++++
Sbjct: 783 RMGDPDYLAAFHHVVMPIATEVTHTHTHTHTHAHTQIVAVVVVACLHASSLQFNPGLVLV 842
Query: 275 SAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNV 334
SAGFDAA GDPLGG VTP GY+ + +LM A G+++L LEGGYNL SIS S+ C +V
Sbjct: 843 SAGFDAARGDPLGGYHVTPEGYAHLTHQLMSLAGGRVLLILEGGYNLSSISKSMAMCTSV 902
Query: 335 LLEDKPVAGSSE-AYPFESTWRVIQAVRKKLSAFWPTL 371
LL D P + + P S I V + + +W +L
Sbjct: 903 LLGDPPPSLVTPLPPPHPSAVATINEVVRHHAPYWRSL 940
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 215/402 (53%), Gaps = 35/402 (8%)
Query: 1 MEVKSGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL 60
+++ S R GL++ + H HPE+P R+ I +LQ G+ +C +
Sbjct: 61 LKMLSVSSRPSASGTGLVFSDIFTHHKNLWDSSHPESPERVTFIMEELQHQGLLSQCTRV 120
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
+EA ++ LL HT++HV+L+++ + D ++ K +S+YL+ S A A GS
Sbjct: 121 EPREATEEELLLCHTKHHVDLLRSTQTMTEDELHS-LSDKYDSVYLHPESFTAGVTAVGS 179
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
++++ +RV EL + FA+VRPPGHHA+ D GFCL+NNVA+AA + ++++
Sbjct: 180 LLQLVDRVMTSELRNGFAVVRPPGHHAQKDLPNGFCLFNNVAIAARYAQTRH---SVSRV 236
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
LIVDWDVHHG TQ +F +DP VL+FSVHR+E G+F+P + +G G NIN+
Sbjct: 237 LIVDWDVHHGQGTQYLFQEDPSVLYFSVHRYEQGSFWPHLPESDSHFVGTPRAAGRNINL 296
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--------------PL 286
PW DADY++ + +LLP+A +F P ++++SAGFDAA D P+
Sbjct: 297 PWNKTGMTDADYISAFQQLLLPIAHEFQPQLVLVSAGFDAAVEDEKVKNTHRLRSNMPPV 356
Query: 287 -----------------GGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVL 329
G V P + ++ LM A+G+++LALEGGYNL S + +
Sbjct: 357 PVSLILQPCCCVCLCVQGEMCVRPPCFHILTHMLMALAEGRLLLALEGGYNLQSTAEAAA 416
Query: 330 ACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
AC+ LL + P +S + I L WP+L
Sbjct: 417 ACVGALLGGACPPLAPPTAPSDSALQSISQTLSALFPHWPSL 458
>gi|119578362|gb|EAW57958.1| histone deacetylase 7A, isoform CRA_g [Homo sapiens]
Length = 398
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 216/365 (59%), Gaps = 32/365 (8%)
Query: 23 MCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVN 80
M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L SVH+E HV
Sbjct: 1 MLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVL 60
Query: 81 LIKNISSKQFDSRRDRIASKL-----------------NSIYLNEGSSEAAYLAAGSVIE 123
L + ++A L ++I+ SS AA AAGSV +
Sbjct: 61 LYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTD 120
Query: 124 VAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIV 183
+A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L + +KILIV
Sbjct: 121 LAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKA---SKILIV 177
Query: 184 DWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE 243
DWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G+N+NV W
Sbjct: 178 DWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWA 235
Query: 244 NGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYSV 298
G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG V+ +
Sbjct: 236 GGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGY 295
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY---PFESTWR 355
M ++LM+ A G +VLALEGG++L +I ++ AC+ LL ++ S E + P + R
Sbjct: 296 MTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIR 355
Query: 356 VIQAV 360
++AV
Sbjct: 356 SLEAV 360
>gi|195356208|ref|XP_002044572.1| GM19975 [Drosophila sechellia]
gi|194132203|gb|EDW53825.1| GM19975 [Drosophila sechellia]
Length = 479
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 192/328 (58%), Gaps = 3/328 (0%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+++ L+YDE M +H H E P R + + + + +RC+ L ++ A +
Sbjct: 106 VRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEI 165
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +HTE H +K S + D R + ++S+ +SIY++ + E + LA+GS IE+ + +
Sbjct: 166 LRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVT 225
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G+ + AI+RPPGHHA E G+C +NNVA+A L+ + +ILI+D+DVHHG
Sbjct: 226 GKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH---KLQRILIIDYDVHHG 282
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ+ F+ DPRV++FS+HR E G+F+P + Y IG G GYN NVP +
Sbjct: 283 QGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSEAGTGYNFNVPLNATGMTNG 342
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYLA++ +LLPVA +F P++II+SAG+DAA G P G VTP Y +L L+ A +
Sbjct: 343 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADAR 402
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLED 338
+ + LEGGY L S++ + LL D
Sbjct: 403 VAVVLEGGYCLDSLAEGAALTLRSLLGD 430
>gi|169597003|ref|XP_001791925.1| hypothetical protein SNOG_01279 [Phaeosphaeria nodorum SN15]
gi|160707422|gb|EAT90928.2| hypothetical protein SNOG_01279 [Phaeosphaeria nodorum SN15]
Length = 525
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 172/272 (63%), Gaps = 2/272 (0%)
Query: 98 ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCL 157
A +L+SIY N+ + E A LAAG IE + V +G + +A AIVRPPGHHAE ++ GFC+
Sbjct: 10 AEQLDSIYFNQATFECAKLAAGGAIEACKAVVQGSVRNAIAIVRPPGHHAESNQPSGFCI 69
Query: 158 YNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFY 217
+NNV +A PE K++I+DWDVHHGN Q F+ DP VL+ S+H G FY
Sbjct: 70 FNNVPIATRVCQEAYPET-CRKVMILDWDVHHGNGIQHAFYNDPNVLYISLHVFRGGNFY 128
Query: 218 PANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAG 277
P DG GEGPG G N+N+PW + GDA+YL + +++P+A +F PD++IISAG
Sbjct: 129 PNLPDGDLDYSGEGPGEGKNVNIPWADHGMGDAEYLYAFQEVVMPIATEFDPDLVIISAG 188
Query: 278 FDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLE 337
FDAA GD LGGC VTP Y M LM A+GK+V+ LEGGYNL SI+ S LA VL+
Sbjct: 189 FDAAEGDILGGCFVTPAAYGHMTHMLMRLARGKLVVCLEGGYNLRSIARSALAVTRVLML 248
Query: 338 DKPVAGSSEA-YPFESTWRVIQAVRKKLSAFW 368
+ P + P +S I+ V+++ S +W
Sbjct: 249 EPPDRLQEDMPAPKDSAVYTIEQVKRQHSRYW 280
>gi|363727524|ref|XP_415986.3| PREDICTED: histone deacetylase 10 [Gallus gallus]
Length = 645
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 212/368 (57%), Gaps = 14/368 (3%)
Query: 16 GLLYDERMCKH----NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
L+YDE M +H N P D E P R+ A + +LQ + +RCV + A+E ++ +L
Sbjct: 6 ALIYDEAMTRHKLLWNDPICDI--EVPERLSASYEQLQCYHLVERCVPVPAREGSEEEIL 63
Query: 72 SVHTENHVNLIKNISS-----KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAE 126
VH++ + + + S + RI+ +S + + + A LA G+ +++ +
Sbjct: 64 LVHSKYIADQFRTLGSCKSTQTMNEEELKRISGNYDSFFFHPNTYHCARLAVGAALQLVD 123
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
V G++ + A+VRPPGHH++ + A GFCL+NNVA+AA + + + G+ +ILIVDWD
Sbjct: 124 SVMSGKVCNGMALVRPPGHHSQRNAANGFCLFNNVAIAAEY---AKLKYGLQRILIVDWD 180
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHG TQ +F +D VL+FS HR+E F+P+ + Y +G G G G+NIN+PW
Sbjct: 181 VHHGQGTQYIFEEDQSVLYFSWHRYEHQEFWPSLKESDYDAVGLGKGKGFNINLPWNKVG 240
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
G++DYLA + H+LLPVA +F P+++++S+G+D+ GDP G TP ++ + LM
Sbjct: 241 MGNSDYLAAFFHVLLPVAFEFDPELVLVSSGYDSGIGDPEGQMNATPEVFAHLTHFLMQL 300
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSA 366
A GK+ + LEGGY+L S+S SV + LL D + E P S IQ VR
Sbjct: 301 AHGKLCVILEGGYHLKSLSESVCMTVKTLLRDPLPQVTGEMAPCLSAIESIQNVRAAHKP 360
Query: 367 FWPTLADE 374
+W L E
Sbjct: 361 YWKWLTYE 368
>gi|449481242|ref|XP_002189697.2| PREDICTED: histone deacetylase 10-like [Taeniopygia guttata]
Length = 579
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 213/368 (57%), Gaps = 6/368 (1%)
Query: 16 GLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
L+YDE M H D E P R+ + + +L++ + +RCV + A+E ++ +L V
Sbjct: 6 ALIYDEEMTTHKLLWSDPICDIEVPERLSSSYEQLRSYHLVERCVPVPAREGSEEEILLV 65
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+ H+ + K+ + + R++ ++ + + + A LA G+ +++ + V G++
Sbjct: 66 HSLEHLEVAKSTQTMN-EEELKRVSKNYDAFFFHPSTYRCARLAVGAALQLVDAVMAGKV 124
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
++ A+VRPPGHH++ + A GFCL+NNVA+AA + + + G+ +ILIVDWDVHHG T
Sbjct: 125 HNGMALVRPPGHHSQRNAANGFCLFNNVAIAAEY---AKLKYGLQRILIVDWDVHHGQGT 181
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F +DP VL+FS HR+E F+P+ + Y +G G G G+N+N+PW G++DYL
Sbjct: 182 QYIFEEDPSVLYFSWHRYEHQEFWPSLRESDYDAVGLGKGKGFNVNLPWNKVGMGNSDYL 241
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + H+LLP+A +F P+++I+S+G+D+ GDP G TP ++ + LM A GK+ +
Sbjct: 242 AAFFHVLLPMAFEFDPELVIVSSGYDSGIGDPEGQMNATPEVFAHLTHFLMQLANGKLCV 301
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
LEGGY+L S+ SV + LL D + E P S IQ VR +W
Sbjct: 302 ILEGGYHLKSLGESVCMTVKTLLGDPVPQITGEMAPCLSAVESIQNVRAAHKPYWKCTKS 361
Query: 374 ELPTKLTS 381
L K S
Sbjct: 362 HLLKKANS 369
>gi|390463099|ref|XP_002748092.2| PREDICTED: histone deacetylase 5 [Callithrix jacchus]
Length = 1123
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 216/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + + +
Sbjct: 684 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLEEIQA 743
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 744 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 803
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 804 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 860
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 861 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 918
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 919 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 978
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A+G++VLALEGG++L +I ++ AC++ LL
Sbjct: 979 VTARCFGHLTRQLMTLAEGRVVLALEGGHDLTAICDASEACVSALL 1024
>gi|67971456|dbj|BAE02070.1| unnamed protein product [Macaca fascicularis]
Length = 662
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 161/240 (67%), Gaps = 10/240 (4%)
Query: 96 RIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGF 155
R +S +SIY+ + A LA G+ + E V GE+ + A+VRPPGHHAE D A GF
Sbjct: 8 RESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAACGF 67
Query: 156 CLYNNVAVAASFLLNERPELGIN----KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH 211
C +N+VAVAA R I+ +ILIVDWDVHHGN TQ MF DP VL+ S+HR+
Sbjct: 68 CFFNSVAVAA------RHAQAISGRALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRY 121
Query: 212 EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
+ GTF+P D+G + IG G G+ +NV W R GDADYLA W ++LP+A +F P++
Sbjct: 122 DHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEFNPEL 181
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLAC 331
+++SAGFDAA GDPLGGC+V+P GY+ + LM A G+I+L LEGGYNL SIS S+ AC
Sbjct: 182 VLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISGSMAAC 241
>gi|356513908|ref|XP_003525650.1| PREDICTED: histone deacetylase 15-like [Glycine max]
Length = 508
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 210/358 (58%), Gaps = 18/358 (5%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H + HPE P+R++AI L AGI P +C + A+E + L++VH+
Sbjct: 109 FDERMLLHAEVEKKSTLHPERPDRLQAIAASLARAGIFPGKCYSIPAREITPEELITVHS 168
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
H+ ++ S + ++S S Y NE S+ AA LAAG ++A + G
Sbjct: 169 LEHIESVEVTS--------ESLSSYFTSDTYANEHSALAARLAAGLCADLASAIVSGRAK 220
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ FA+VRPPGHHA +AMGFCL+NN AVAA K+LI+DWDVHHGN TQ
Sbjct: 221 NGFALVRPPGHHAGVRQAMGFCLHNNAAVAALAAQAAG----ARKVLILDWDVHHGNGTQ 276
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
++F ++ VL+ S+HRHE G FYP G +G G+ +N+PW G GD DY+
Sbjct: 277 EIFEQNKSVLYISLHRHEGGKFYPGT--GAAEEVGSMGAEGFCVNIPWSQGGVGDNDYIF 334
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H++LP+A +F PD+ I+SAGFDAA GDPLG C +TP GY+ M L + GK+++
Sbjct: 335 AFQHVVLPIAAEFNPDLTIVSAGFDAARGDPLGCCDITPSGYAHMTNMLNALSGGKLLVI 394
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGYNL SIS+S A + VLL + P ++P ++ + + V K FWP L
Sbjct: 395 LEGGYNLRSISSSATAVIKVLLGESPGCELENSFPSKAGLQTVLEVLKIQMNFWPALG 452
>gi|395826249|ref|XP_003786331.1| PREDICTED: histone deacetylase 5 [Otolemur garnettii]
Length = 1113
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 215/347 (61%), Gaps = 29/347 (8%)
Query: 14 RVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+ G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A +
Sbjct: 673 KTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQ 732
Query: 72 SVHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAA 114
+VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 733 TVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAV 792
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPE 174
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +
Sbjct: 793 RMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQK 849
Query: 175 LGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGL 234
L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+
Sbjct: 850 LNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGV 907
Query: 235 GYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGC 289
GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 908 GYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGY 967
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 968 SVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1014
>gi|37572908|dbj|BAC65607.2| mKIAA0600 protein [Mus musculus]
Length = 917
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 216/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 478 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQT 537
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 538 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 597
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 598 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 654
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 655 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 712
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G PLGG
Sbjct: 713 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYS 772
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 773 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 818
>gi|74199355|dbj|BAE33201.1| unnamed protein product [Mus musculus]
Length = 1115
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 216/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 676 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQT 735
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 736 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMQSSSAVR 795
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 796 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 852
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 853 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 910
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G PLGG
Sbjct: 911 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYS 970
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 971 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1016
>gi|358333750|dbj|GAA52221.1| histone deacetylase 6/10 [Clonorchis sinensis]
Length = 1011
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 217/415 (52%), Gaps = 52/415 (12%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+YD RM H E+P RI+ + + Q G+ RC ++ A++ ++ L S+H
Sbjct: 32 TGLVYDPRMTLHKHEWFSNEQESPARIQQAFKRCQEEGLVMRCTMVPARQISEQALTSIH 91
Query: 75 TENHVNLIKNISSKQFD-SRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
++ IK S+ F +++ + + ++ NE + ++ LAAGS+ +A V G L
Sbjct: 92 GRKYIQRIKQ--SRNFALPELYKLSGQFDGVFFNEATWASSCLAAGSLKHLANLVVHGRL 149
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL------------------ 175
+ FA++RPPGHHA EA G+C +NNVAV + L+ P +
Sbjct: 150 ANGFALLRPPGHHAMHSEACGYCFFNNVAVTTASFLDPLPNVLQVEEKGCPNVRKTRSRP 209
Query: 176 ----GINK---------------------------ILIVDWDVHHGNSTQKMFWKDPRVL 204
GI+K ILIVDWDVHHG TQ F++D RVL
Sbjct: 210 SSTKGISKDTTLSDALKLSNADTASKLCSRVKLERILIVDWDVHHGQGTQYAFYQDKRVL 269
Query: 205 FFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVA 264
F S+HR E G F+P + Y IG+GPG GYN+N+P E D+DYLA++ +++P+A
Sbjct: 270 FISIHRFEQGNFWPNLREANYDFIGDGPGRGYNVNIPLEETGLTDSDYLAMFHQLIMPIA 329
Query: 265 KDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSI 324
+F P+++I+S GFDAA G P G ++P + + L A GK+V+ALEGGY + S+
Sbjct: 330 IEFNPELVIVSCGFDAAIGCPEGRMWLSPAVFGHFIHHLKMLAGGKLVVALEGGYYVDSL 389
Query: 325 SNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKL 379
+ + + LL D+P P +ST R I A L A+W +L PTK+
Sbjct: 390 AEGSVHVLKALLGDQPAPLRLSCPPCKSTRRTIDACSTALRAYWKSLWVCGPTKM 444
>gi|148702152|gb|EDL34099.1| histone deacetylase 5, isoform CRA_b [Mus musculus]
Length = 1177
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 216/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 750 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQT 809
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 810 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 869
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 870 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 926
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 927 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 984
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G PLGG
Sbjct: 985 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYS 1044
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 1045 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1090
>gi|6911182|gb|AAF31418.1|AF207748_1 histone deacetylase 5 [Mus musculus]
Length = 1114
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 216/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 675 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQT 734
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 735 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 794
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 795 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 851
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 852 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 909
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G PLGG
Sbjct: 910 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYS 969
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 970 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1015
>gi|148702151|gb|EDL34098.1| histone deacetylase 5, isoform CRA_a [Mus musculus]
Length = 1115
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 216/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 676 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQT 735
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 736 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 795
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 796 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 852
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 853 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 910
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G PLGG
Sbjct: 911 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYS 970
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 971 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1016
>gi|118136299|ref|NP_034542.3| histone deacetylase 5 isoform 2 [Mus musculus]
gi|38148663|gb|AAH60609.1| Histone deacetylase 5 [Mus musculus]
Length = 1114
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 216/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 675 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQT 734
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 735 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 794
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 795 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 851
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 852 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 909
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G PLGG
Sbjct: 910 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYS 969
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 970 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1015
>gi|10720029|sp|Q9Z2V6.2|HDAC5_MOUSE RecName: Full=Histone deacetylase 5; Short=HD5; AltName: Full=Histone
deacetylase mHDA1
gi|6978314|gb|AAD09834.2| histone deacetylase mHDA1 [Mus musculus]
Length = 1113
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 216/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 674 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQT 733
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 734 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 793
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 794 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 850
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 851 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 908
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G PLGG
Sbjct: 909 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYS 968
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 969 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1014
>gi|118136295|ref|NP_001071164.1| histone deacetylase 5 isoform 1 [Mus musculus]
gi|74138789|dbj|BAE27204.1| unnamed protein product [Mus musculus]
Length = 1115
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 216/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 676 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQT 735
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 736 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 795
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 796 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 852
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 853 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 910
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G PLGG
Sbjct: 911 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYS 970
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 971 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1016
>gi|148702153|gb|EDL34100.1| histone deacetylase 5, isoform CRA_c [Mus musculus]
Length = 1116
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 216/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 677 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQT 736
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 737 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 796
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 797 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 853
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 854 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 911
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G PLGG
Sbjct: 912 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYS 971
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 972 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1017
>gi|281306754|ref|NP_445902.1| histone deacetylase 5 [Rattus norvegicus]
gi|149054361|gb|EDM06178.1| rCG33890, isoform CRA_a [Rattus norvegicus]
Length = 1113
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 215/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 674 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 733
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 734 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 793
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 794 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 850
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 851 SVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 908
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 909 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 968
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 969 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1014
>gi|334347699|ref|XP_001364322.2| PREDICTED: histone deacetylase 10-like [Monodelphis domestica]
Length = 717
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 213/365 (58%), Gaps = 12/365 (3%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+YDE M + D + E P R+ + + +L G+ QRCV L +EA ++ L
Sbjct: 12 TALIYDEAMTRVRLLWVDPECAIEVPERLTSTYARLCQRGLAQRCVRLPVREATEEELEM 71
Query: 73 VHTENHVNLIKN---ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
VH+ +V ++K +S K+ + +A + +++Y + + A +A G+ +++ + +
Sbjct: 72 VHSPEYVAVVKGTQAMSKKELQT----LAQQYDAVYFHPSTFPCARMAVGATLQLVDAIL 127
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
G + + A+VRPPGHH++ D A GFC++NNVA+AA + G+ ++LIVDWD+HH
Sbjct: 128 TGAVGNGMALVRPPGHHSQRDAANGFCVFNNVAIAAEYAKRRH---GLQRVLIVDWDIHH 184
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
G TQ++F DP VL+FS HR+E +F+P + Y +G+GPG G+ INVPW +
Sbjct: 185 GQGTQRIFENDPSVLYFSWHRYEHQSFWPRLQESDYNAVGQGPGRGFTINVPWNKTGMRN 244
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
ADY++V+ H+LLP+A +F P+ +++SAGFD+ GDP G TP ++ + L+ A+G
Sbjct: 245 ADYVSVFLHVLLPLAIEFDPEFVLVSAGFDSGIGDPEGQMEATPECFAHLTLLLLPLARG 304
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWP 369
++ LEGGY+L S++ V + LL D A S + P S IQ VR + W
Sbjct: 305 RLCAVLEGGYHLRSLAECVCMTLQTLLGDPVPALSGDPAPCLSAVESIQNVRAAHARHWA 364
Query: 370 TLADE 374
+L E
Sbjct: 365 SLGHE 369
>gi|339246377|ref|XP_003374822.1| putative histone deacetylase 4 [Trichinella spiralis]
gi|316971949|gb|EFV55662.1| putative histone deacetylase 4 [Trichinella spiralis]
Length = 784
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 218/392 (55%), Gaps = 25/392 (6%)
Query: 5 SGEGRTIKRRVGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA 62
SG+G T K G+ +D M +H+ H E RIK IW+ LQ+ + ++C LN
Sbjct: 383 SGDGNTPKT-TGIAFDLLMARHDCICSIKGQHIEEGERIKTIWSHLQSTDLFEKCKKLNG 441
Query: 63 KEAKDKNLLSVHTENHVNL--IKNISSKQFDSRRDRIASKLN----------SIYLNEGS 110
++A + L H E + + + + D R + S + Y N+GS
Sbjct: 442 RKAPLEYLRLCHDECYTTFFGVSPTACLKTDPTRLPLRSFIQLPCGGIGVDADTYFNDGS 501
Query: 111 SE-AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
++ +A +A G +++ VA G L + FA+VRPPGHHAEP +AMGFC +NN+A+A L
Sbjct: 502 TQLSARVAVGCTVDLCLAVAAGTLENGFALVRPPGHHAEPVQAMGFCFFNNIAIAVRVLQ 561
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
++P L K I+DWDVHHG TQ +F DP VL+ S+HR++ GTF+P G T +G
Sbjct: 562 QKKPHL--KKFAIIDWDVHHGKGTQLIFENDPNVLYLSLHRYDNGTFFPGT--GSLTEVG 617
Query: 230 EGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLG 287
G G G+ +N+ W G GDADYLA + H++LP+ F PD ++++AGFDAA G LG
Sbjct: 618 SGAGAGFTVNIAWSGGSMGDADYLAAFAHVVLPILDQFEPDFVLVAAGFDAADGHHVTLG 677
Query: 288 GCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP---VAGS 344
G ++P ++ M + L+ +A ++VL LEGGY L ++ + C+ VL + A +
Sbjct: 678 GYHLSPAIFAHMTRSLLRYADSRLVLVLEGGYELKVVNECIEECLRVLCGQESRALSAEA 737
Query: 345 SEAYPFESTWRVIQAVRKKLSAFWPTLADELP 376
A P ES V++ + + +WP L + P
Sbjct: 738 LAASPSESAQTVLRQLINEQRPYWPILDPKAP 769
>gi|348559977|ref|XP_003465791.1| PREDICTED: histone deacetylase 5-like isoform 1 [Cavia porcellus]
Length = 1106
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 668 TGVVYDTFMLKHQCVCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERVRGRKATLDEIQT 727
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 728 VHSELHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 787
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L +L
Sbjct: 788 MAVGCLLELAFKVASGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQ---KL 844
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ ++LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 845 SVGRVLIVDWDIHHGNGTQQAFYTDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 902
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YLA + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 903 YNVNVAWTGGVDPPIGDVEYLAAFRTVVMPIAHEFAPDVVLVSAGFDAVEGHLSPLGGYS 962
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 963 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1008
>gi|357605690|gb|EHJ64741.1| putative histone deacetylase hda2 [Danaus plexippus]
Length = 1092
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 222/386 (57%), Gaps = 12/386 (3%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
V +YD M KH+ H E P RI I + + G+ +R L + A D +L+VH
Sbjct: 494 VCYIYDPAMLKHHNVCEPGHVECPERIMRIHERHRDFGLLERVHRLPPRSAADDEILAVH 553
Query: 75 TENHVNLIKNISSKQFDSRRDRIASK--LNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
TE +++ +K +SS + RD A + +S+Y + S ++A AAG+VI++ + V
Sbjct: 554 TEKYLDSLKELSSTKL---RDLNAQRKSFDSVYFHPDSLQSAAAAAGAVIQMVDAVLR-H 609
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ +VRPPGHHA+ D GFCL NNVAV A + R G+ +I+I+DWDVHHGN
Sbjct: 610 GSGGVCVVRPPGHHADEDVPSGFCLLNNVAVGAR---HARAAHGLTRIMILDWDVHHGNG 666
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++ ++D +L+ S+HR++ G+F+P + +T +G+G G GYNIN+PW GDA+Y
Sbjct: 667 TQRITYEDKEILYISIHRYDNGSFFPNSPAADHTAVGQGRGEGYNINIPWNKRGMGDAEY 726
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
L+ ++LPVA ++GP ++++SAGFDAA GDPLGGC+VTP Y M L A G+++
Sbjct: 727 LSAMCSVVLPVAYEYGPQLVLVSAGFDAAVGDPLGGCKVTPECYGRMTHMLRGLAGGRVI 786
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPF--ESTWRVIQAVRKKLSAFWPT 370
+ LEGGYN+ SIS ++ C LL D P+ + S I V + +W +
Sbjct: 787 VCLEGGYNVTSISYAMTMCTKALLGD-PLQHQYDPKQTVNPSAVESINNVIRTHQKYWKS 845
Query: 371 LADELPTKLTSLKAPPAHMISSSDSE 396
L +L + + P DSE
Sbjct: 846 LKFQLALPMEDVIGPLPKSRGLPDSE 871
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 200/362 (55%), Gaps = 25/362 (6%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+K G + D RM +H D +PE P R+ ++ N+ Q + ++C V + A + +
Sbjct: 43 VKGATGFVTDPRMSEHRCLWDDNYPECPERLISVINRCQELNLIEQCKVYPPRSATREEV 102
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L +H+ + ++++ Q + +++ +++Y++ + E A +AG +++ ER+
Sbjct: 103 LELHSPSVYSMMEGTHQNQDLEYLEELSAGFDAVYIHPTTHELALSSAGCTLDMVERLVS 162
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
EL +A +VRPPGHHA E G+C+YNN A+AA+ L G+ +ILIVDWDVHHG
Sbjct: 163 DELQNAACMVRPPGHHAMRAEPCGYCIYNNAALAANRALKL----GLQRILIVDWDVHHG 218
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
+TQ+MF+ DPRV++FS+HR+E G F+P + IG G G G+N NVP N DA
Sbjct: 219 QATQQMFYDDPRVVYFSIHRYEHGAFWPNLRQSDFPYIGSGQGEGHNFNVPLNNTGMTDA 278
Query: 251 DYLAVWDHILLPVA--------------------KDFGPDIIIISAGFDAAAGDPLGGCR 290
DY+A+W +LLP+A +F P++II+SAG+DAA GD G
Sbjct: 279 DYIAIWHQLLLPMAFEYQPQLVLVSAGYDAAVGCPEFSPELIIVSAGYDAALGDEKGEME 338
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPF 350
VTP Y+ +L L ++++ LEGGY L S++ + LL P A P
Sbjct: 339 VTPACYASLLHMLQGVC-SRVLVLLEGGYCLRSLAEGAALTLRTLLGHAPPALPPLQEPC 397
Query: 351 ES 352
ES
Sbjct: 398 ES 399
>gi|397468480|ref|XP_003805908.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 5 [Pan paniscus]
Length = 1124
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 685 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 744
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 745 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 804
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 805 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 861
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 862 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 919
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 920 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 979
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 980 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1025
>gi|340368352|ref|XP_003382716.1| PREDICTED: histone deacetylase 4-like [Amphimedon queenslandica]
Length = 938
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 220/409 (53%), Gaps = 55/409 (13%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+YD M KHN G HPE+P R+++IW +L GI QR L A++A L VH
Sbjct: 501 TGLVYDTMMLKHNCCCGSSHPEHPGRLQSIWARLHETGIVQRSTRLRARKASLAELQCVH 560
Query: 75 TENHVNL------IKNISSK---------------------------QFDSRRDRIASKL 101
+ENHV L +K K Q S R+
Sbjct: 561 SENHVRLYGRPNKLKTSQDKKDMAGMRAFVQMSCGGAGVDTDTYWNDQHTSNAARMVDT- 619
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
++ + ++ +S AA +A GSVIE+A+++ G++ + FA++RPPGHH+ ++AM FC +NN+
Sbjct: 620 DTYWNDQHTSNAARMAVGSVIELADKIVNGDIQNGFALIRPPGHHSLQNQAMAFCYFNNI 679
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND 221
A+AA ++ + K+ IVDWD+HHGN TQ++F+ +P VLF S+HR++ GTF+P
Sbjct: 680 ALAAKAMIAKN-----KKVAIVDWDIHHGNGTQQIFYDNPAVLFISLHRYDNGTFFPGT- 733
Query: 222 DGFYTMIGEGPGLGYNINVPWENGRC---------GDADYLAVWDHILLPVAKDFGPDII 272
G +G G G GYN+N+ + + GD +YLA + +++P+ + PDII
Sbjct: 734 -GRPEEVGSGGGTGYNVNIAFSGKQSFQGVTTSNFGDPEYLAAFRLVIIPILRSHNPDII 792
Query: 273 IISAGFDAAAGDP--LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLA 330
++SAGF+A G P LGG VTP Y+ + + LM+ G++ +ALEGG+ L S+ S A
Sbjct: 793 LVSAGFNATNGHPPTLGGYSVTPKCYAHLTRMLMNCGNGRVAIALEGGFELMSLCESAEA 852
Query: 331 CMNVLL-EDKPV--AGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELP 376
M LL E+ P A S P + I+ +W L +P
Sbjct: 853 VMRALLFENLPPLDAASLTRGPQPTAVASIEKTIACQKPYWSCLQQSVP 901
>gi|348559979|ref|XP_003465792.1| PREDICTED: histone deacetylase 5-like isoform 2 [Cavia porcellus]
Length = 1115
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 215/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 677 TGVVYDTFMLKHQCVCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERVRGRKATLDEIQT 736
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 737 VHSELHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 796
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 797 MAVGCLLELAFKVASGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 853
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ ++LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 854 SVGRVLIVDWDIHHGNGTQQAFYTDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 911
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YLA + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 912 YNVNVAWTGGVDPPIGDVEYLAAFRTVVMPIAHEFAPDVVLVSAGFDAVEGHLSPLGGYS 971
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 972 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1017
>gi|332847466|ref|XP_511542.3| PREDICTED: histone deacetylase 5 isoform 2 [Pan troglodytes]
gi|332847468|ref|XP_003315458.1| PREDICTED: histone deacetylase 5 isoform 1 [Pan troglodytes]
gi|4754909|gb|AAD29047.1|AF132608_1 histone deacetylase 5 [Homo sapiens]
gi|20142343|tpg|DAA00017.1| TPA_exp: histone deacetylase [Homo sapiens]
gi|30353988|gb|AAH51824.1| Histone deacetylase 5 [Homo sapiens]
gi|119572019|gb|EAW51634.1| histone deacetylase 5, isoform CRA_b [Homo sapiens]
Length = 1122
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 683 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 742
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 743 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 802
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 803 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 859
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 860 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 917
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 918 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 977
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 978 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1023
>gi|402884655|ref|XP_003905791.1| PREDICTED: histone deacetylase 10 isoform 1 [Papio anubis]
Length = 671
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 212/359 (59%), Gaps = 6/359 (1%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA + L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASKEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRK-TQVLGEEELQALSRQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA++ + + G+++ILIVDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHSQRAAANGFCVFNNVAIAAAY---AKQKHGLHRILIVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + L A G++
Sbjct: 239 VAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTHLLQVLAGGRVC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D S P +S IQ+ R + +W +L
Sbjct: 299 AMLEGGYHLESLAESVCMTVQTLLGDSAPPLSGLMVPCQSALESIQSARAAQAPYWKSL 357
>gi|62750347|ref|NP_005465.2| histone deacetylase 5 isoform 1 [Homo sapiens]
gi|296434519|sp|Q9UQL6.2|HDAC5_HUMAN RecName: Full=Histone deacetylase 5; Short=HD5; AltName: Full=Antigen
NY-CO-9
Length = 1122
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 683 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 742
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 743 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 802
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 803 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 859
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 860 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 917
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 918 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 977
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 978 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1023
>gi|432892326|ref|XP_004075765.1| PREDICTED: histone deacetylase 10-like [Oryzias latipes]
Length = 534
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 217/390 (55%), Gaps = 15/390 (3%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+YDE M K+ D E P R+ L G+ RC+ L +EA D +L
Sbjct: 3 TALIYDEEMTKYKLLWVDPACKIEVPERLTVSHGALVRNGLTDRCICLPVREAVDAEILL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+E ++ +K + ++ + +Y + A LA GS +++ + V G+
Sbjct: 63 VHSEEYLEAVKQTPHMTLEDLKE-FTLQYGDVYFHPNIYHCAKLAVGSALQLVDSVLMGK 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH+ A GFC++NNVA+AA + + + G+ +ILIVDWD+HHG
Sbjct: 122 VKNGMALVRPPGHHSMRSAANGFCVFNNVAIAAQY---AKQKYGVKRILIVDWDIHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q F DP VL+FS HR+E F+P D Y ++G+G G G+NINVPW ++DY
Sbjct: 179 VQYCFEDDPSVLYFSWHRYEHQKFWPNLKDSDYDIVGKGEGAGFNINVPWNKVGMENSDY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
L+V+ H+LLP+A +F PD++++ AGFD+A GD G TP ++ + LM+ A+GK+
Sbjct: 239 LSVFCHVLLPIAYEFCPDLVLVCAGFDSAIGDLEGEMCATPDIFAHLTYLLMNLAEGKLC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL- 371
LEGGYNL S++ SV + LL D ++ P ST +Q VR W L
Sbjct: 299 AVLEGGYNLTSLAQSVCQTVQTLLGDPLPPLTNLTGPCRSTLESLQCVRAAHRQHWSCLR 358
Query: 372 -ADELPT-KLTSLKAPPAHMISSSDSEDED 399
A +LPT ++++++ I SS E++D
Sbjct: 359 HAVDLPTFEISTIR------IKSSGEENKD 382
>gi|410981331|ref|XP_003997024.1| PREDICTED: histone deacetylase 5 [Felis catus]
Length = 1116
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 215/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 677 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 736
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 737 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 796
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 797 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 853
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 854 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 911
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 912 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 971
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 972 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1017
>gi|62750349|ref|NP_001015053.1| histone deacetylase 5 isoform 3 [Homo sapiens]
Length = 1123
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 684 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 743
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 744 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 803
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 804 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 860
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 861 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 918
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 919 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 978
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 979 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1024
>gi|291406227|ref|XP_002719479.1| PREDICTED: histone deacetylase 5-like [Oryctolagus cuniculus]
Length = 1114
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 215/346 (62%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 675 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 734
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 735 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 794
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 795 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 851
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 852 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 909
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 910 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 969
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 970 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1015
>gi|194227003|ref|XP_001914927.1| PREDICTED: histone deacetylase 10-like [Equus caballus]
Length = 716
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 215/375 (57%), Gaps = 8/375 (2%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ +L+ G+ QRC+ L A+EA ++ L
Sbjct: 3 TALVYHEDMTAARLLWDDPECEIECPERLTIALERLRQRGLEQRCLRLAAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V L++ + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVALLRGTQALG-TGELQALSGQYDAIYFHPSTFHCARLAAGAALQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA + + + G+++ILIVDWD+HHG
Sbjct: 122 VQNGLALVRPPGHHSQRAAANGFCVFNNVAIAAK---HAKQKHGLHRILIVDWDIHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G+G G G+ +N+PW G+ADY
Sbjct: 179 IQYIFEDDPSVLYFSWHRYEHGRFWPYLQESDTDAVGQGQGRGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P++++++AGFD+A GDP G + TP ++ + + L A G++
Sbjct: 239 VAAFLHVLLPLAFEFDPELVLVAAGFDSAVGDPEGQMQATPECFAHLTQLLQVLACGRVC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL- 371
LEGGY+L S+S SV + LL D P+ S P S IQ+VR + W +L
Sbjct: 299 AVLEGGYHLESLSQSVCMMVQALLGDPPLPLSGPMEPHRSALESIQSVRAAQAPHWMSLQ 358
Query: 372 -ADELPTKLTSLKAP 385
D P S ++P
Sbjct: 359 QQDAAPVLSPSTRSP 373
>gi|395537736|ref|XP_003770848.1| PREDICTED: histone deacetylase 10 [Sarcophilus harrisii]
Length = 825
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 214/364 (58%), Gaps = 19/364 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RV LL+D+ C E P R+ + + +L G+ QRCV L +EA +++L V
Sbjct: 138 RVRLLWDDPECAI---------EVPERLTSTYARLCHRGLAQRCVQLPVREATEEDLELV 188
Query: 74 HTENHVNLIK---NISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
H+ +V ++K +S +Q + +A + +++Y + + A +A G+ +++ + V
Sbjct: 189 HSPEYVAVVKGTQTMSREQLHT----LAQQYDAVYFHPSTFPCARMAVGATLQLVDAVVT 244
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + + A+VRPPGHH++ D A GFC++NNVA+AA + + G+ +ILIVDWD+HHG
Sbjct: 245 GAVGNGMALVRPPGHHSQRDAANGFCVFNNVAIAAE---HAKRRHGLQRILIVDWDIHHG 301
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
Q+ F DP VL+FS HR+E +F+P + Y ++G+GPG G+ +NVPW +A
Sbjct: 302 QGIQRAFENDPSVLYFSWHRYEHQSFWPRLRESDYDVVGQGPGRGFTVNVPWNKVGMRNA 361
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY++V+ H+LLP+A +F P+++++SAG+D+ GDP G + TP ++ + L+ A+G+
Sbjct: 362 DYVSVFLHVLLPLAIEFDPELVLVSAGYDSGIGDPEGEMKATPECFAHLTFLLLPLARGR 421
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPT 370
+ LEGGY L S++ V + LL D A S E P S IQ VR + W +
Sbjct: 422 LCAVLEGGYYLQSLAECVCLTLQTLLGDPVPALSGEPVPCLSALESIQNVRAAHAPHWAS 481
Query: 371 LADE 374
L E
Sbjct: 482 LRHE 485
>gi|83768243|dbj|BAE58382.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 691
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 203/368 (55%), Gaps = 17/368 (4%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
GL YD +M H P D HPE+P RI I+ +L AG+ + + L
Sbjct: 55 GLCYDVQMRYHCEVRPTADVHPEDPRRIYYIYKELCRAGL--------VDDPESSRPLVS 106
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
++ + D + +SIY N+ + ++ L+ G IE VA ++
Sbjct: 107 RPMKRISTSLTDLTDMTDDELIALEHTRDSIYFNKLTFASSLLSVGGAIETCLAVATRKV 166
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG--INKILIVDWDVHHG- 190
+A A++RPPGHHAE D+ MGFCL+NNV+VAA + +LG KILI+DWDVHHG
Sbjct: 167 KNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVC---QKQLGDKCRKILILDWDVHHGK 223
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
ST F+ DP VL+ S+H ++ G FYP D+G + G G G G N+N+PW + GD
Sbjct: 224 TSTNNAFYDDPNVLYISLHVYQDGKFYPGGDEGDWDHCGTGAGYGRNVNIPWPSQGMGDG 283
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY+ + +++P+A++F PD++I+++GFDAA GD LGGC VTP Y+ M LM A GK
Sbjct: 284 DYMYAFQQVVMPIAQEFDPDLVIVASGFDAAVGDELGGCFVTPTCYAHMTHMLMTLANGK 343
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPT 370
+ + LEGGYN SIS S LA L+ D P S +P + ++ V S FW
Sbjct: 344 VAVCLEGGYNFRSISKSALAVTKTLMGDPPDRLHS-TFPSKLATTTVRRVMMIQSQFWSC 402
Query: 371 LADELPTK 378
+ + P +
Sbjct: 403 MYPKAPQE 410
>gi|332265030|ref|XP_003281532.1| PREDICTED: histone deacetylase 10 [Nomascus leucogenys]
Length = 744
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 217/370 (58%), Gaps = 8/370 (2%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRETQVLGKEELQA-LSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKYGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFEFDPELVLVSAGFDSAVGDPEGQMQATPECFAHLTQLLQVLAGGRVC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPT-- 370
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +
Sbjct: 299 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMVPCQSALESIQSARAAQAPHWKSLQ 358
Query: 371 LADELPTKLT 380
L D P L+
Sbjct: 359 LQDVTPVPLS 368
>gi|162458726|ref|NP_001105095.1| histone deacetylase [Zea mays]
gi|22135463|gb|AAM93212.1|AF527611_1 histone deacetylase HDA110 isoform 1 [Zea mays]
gi|194688770|gb|ACF78469.1| unknown [Zea mays]
gi|223947545|gb|ACN27856.1| unknown [Zea mays]
gi|414883636|tpg|DAA59650.1| TPA: histone deacetylase HDA110 isoform 2Histone deacetylase HDA110
isoform 3 [Zea mays]
Length = 618
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/384 (41%), Positives = 217/384 (56%), Gaps = 26/384 (6%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + + HPE P+R++AI L AAGI P +C ++ +E + LL VH+
Sbjct: 208 FDERMLLHSELEVKPNPHPERPDRLRAIAASLAAAGIFPSKCALVPPREITKEELLMVHS 267
Query: 76 ENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+H+ + KN+ F S Y N S+ AA LAAG ++A + G
Sbjct: 268 PDHIESVEQTKNMLYSYFTS----------DTYANGHSACAAKLAAGLCADLASLIVSGR 317
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + FA+VRPPGHHA +AMGFCL+NN AVAA K+LIVDWDVHHGN
Sbjct: 318 VRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAKRAG----AKKVLIVDWDVHHGNG 373
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F D VL+ S+HRHE G FYP G +G G G+++N+PW G GD DY
Sbjct: 374 TQEIFDGDKTVLYISLHRHEDGNFYPGT--GAAHEVGVLDGQGFSVNIPWSRGGVGDDDY 431
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ + ++LP+A +F DI IISAGFDAA GDPLG C VTP GYS M L + G+++
Sbjct: 432 IFAFQTVVLPIASEFAADITIISAGFDAARGDPLGCCDVTPTGYSWMTSLLAGSSNGRLL 491
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
+ LEGGYNL SIS+S + VLL + P S P + + V K FWP L
Sbjct: 492 VILEGGYNLRSISSSATEVVKVLLGEGPNRASFVVSPSKEALSTVSQVLKIQQQFWPVLG 551
Query: 373 DELPTKLTSLKAPPAHMISSSDSE 396
PT SL+A + S+ +E
Sbjct: 552 ---PT-YASLQAQQGSVSSNHSNE 571
>gi|449664585|ref|XP_002162824.2| PREDICTED: histone deacetylase 4-like [Hydra magnipapillata]
Length = 428
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/383 (37%), Positives = 222/383 (57%), Gaps = 39/383 (10%)
Query: 15 VGLLYDERMCKHNTPDGDY---HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
GL+YD M KH G+ HPE+ R+++IW +LQ G+ C ++ ++A L
Sbjct: 2 TGLVYDPIMLKHQCTCGESYPKHPESAGRLQSIWARLQETGVANMCELIRPRKATIAELQ 61
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLN---------SIYLNEGSSEAAYLAAGSVI 122
+VH+E H L+ +++ ++ R + L+ +++ + +S AA +AAG VI
Sbjct: 62 TVHSEKHT-LLYGSGTRKEGTQNLRCFTTLSCGGVGVDAVTVWNDTHTSNAARMAAGCVI 120
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E+A +VA EL + FAIVRPPGHHAE +AMG+C +N+VA+AA L ++ ++LI
Sbjct: 121 ELAFKVASNELKNGFAIVRPPGHHAETHQAMGYCYFNSVAIAAKLLC---LKMAAERVLI 177
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
DWD+HHGN TQ+MF+ D RVL+ S+HRH+ G+F+P G G G G+G NIN+P+
Sbjct: 178 FDWDIHHGNGTQQMFYDDDRVLYISIHRHDEGSFFPGT--GKAEECGAGIGVGCNINIPF 235
Query: 243 ENGR-----CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYG 295
+ G C + + L + K+F PDII+ISAGF+AA G D LGG V+
Sbjct: 236 DGGLGIYKFCWFIKWFCCY---CLNLCKNFQPDIILISAGFNAAGGHSDALGGYNVSSAC 292
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL-------LEDKPVAGSSEAY 348
+S M K+LM FA GK+VL LEGGY L ++ ++ +C+ L L +K + G
Sbjct: 293 FSYMTKELMQFANGKVVLVLEGGYILQTLCDASESCIRALLGCSTNELSEKVLKGK---- 348
Query: 349 PFESTWRVIQAVRKKLSAFWPTL 371
P ++ + ++ V + +WP +
Sbjct: 349 PNDNAIKCLEKVVELQGRYWPGI 371
>gi|109094626|ref|XP_001112365.1| PREDICTED: histone deacetylase 10-like isoform 3 [Macaca mulatta]
Length = 671
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/357 (36%), Positives = 212/357 (59%), Gaps = 6/357 (1%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA + L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASKEELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G +
Sbjct: 65 SPEYVSLVRK-TQVLGEEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQ 123
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++ILIVDWDVHHG Q
Sbjct: 124 NGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILIVDWDVHHGQGIQ 180
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 181 YLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVA 240
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + L A G++
Sbjct: 241 AFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTHLLQVLAGGRVCAM 300
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D S P +S IQ+ R + +W +L
Sbjct: 301 LEGGYHLESLAESVCMTVQALLGDPAPPLSGLMVPCQSALESIQSARAAQAPYWKSL 357
>gi|54633190|dbj|BAD66831.1| KIAA0600 splice variant 1 [Homo sapiens]
Length = 716
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 277 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 336
Query: 73 VHTENHVNLIKN--ISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 337 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 396
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 397 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 453
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 454 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 511
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 512 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 571
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 572 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 617
>gi|355563788|gb|EHH20350.1| hypothetical protein EGK_03191 [Macaca mulatta]
Length = 671
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/357 (36%), Positives = 212/357 (59%), Gaps = 6/357 (1%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA + L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASKEELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G +
Sbjct: 65 SPEYVSLVRK-TQVLGEEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQ 123
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++ILIVDWDVHHG Q
Sbjct: 124 NGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILIVDWDVHHGQGIQ 180
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 181 YLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVA 240
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + L A G++
Sbjct: 241 AFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTHLLQVLAGGRVCAM 300
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D S P +S IQ+ R + +W +L
Sbjct: 301 LEGGYHLESLAESVCMTVQALLGDPAPPLSGLMVPCQSALESIQSARAAQAPYWKSL 357
>gi|395749057|ref|XP_002827497.2| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 5 [Pongo abelii]
Length = 1107
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 668 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 727
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 728 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 787
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 788 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 844
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 845 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 902
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 903 YNVNVAWIGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 962
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 963 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1008
>gi|338711835|ref|XP_003362592.1| PREDICTED: histone deacetylase 5-like [Equus caballus]
Length = 1125
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 686 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 745
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 746 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 805
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L + +L
Sbjct: 806 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL---QQKL 862
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 863 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 920
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 921 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 980
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 981 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1026
>gi|274317313|ref|NP_001033114.2| histone deacetylase 5 [Bos taurus]
Length = 1125
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 686 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 745
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 746 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 805
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L + +L
Sbjct: 806 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL---QQKL 862
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 863 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 920
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 921 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 980
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 981 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1026
>gi|219119025|ref|XP_002180279.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408536|gb|EEC48470.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 693
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 204/349 (58%), Gaps = 24/349 (6%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAG--IPQRCVVLNAKEAK------ 66
VGLL+ +R + YH E P RI+ + LQ + + QRC VLN + ++
Sbjct: 144 VGLLHFDRRNR-------YHKERPIRIQCLVEALQTSKDELYQRCCVLNDERSEAARSFL 196
Query: 67 -DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVA 125
D++ L VH ++ + +S+ DR A + SIYL S A AA S+ +
Sbjct: 197 EDEDFLRVHRAGYIQRLAKLSACTCCETIDREAEQYKSIYLTADSLLEAQQAATSLCTLV 256
Query: 126 ERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
V +G+L++ FAI+RPPGHHAEP A G+C+ NNVAVA ++ R +L + KILIVDW
Sbjct: 257 SGVVQGDLDNGFAIIRPPGHHAEPGLASGYCVINNVAVATAYA---RSKLNVKKILIVDW 313
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ +F DP VL+FSVHR G ++P + +G G G G+ +NV W
Sbjct: 314 DVHHGNGTQAIFLNDPNVLYFSVHRWHGGNYFPFLPNAGPATVGTGKGEGFTVNVGWTRK 373
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
G+ +Y AVW+ +L+P+A +F P++++ISAGFDAA GD LG CRVTP G+ + + L
Sbjct: 374 NMGNDEYYAVWERLLMPMAHEFDPELVLISAGFDAADGD-LGECRVTPEGFGGLTRALTT 432
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTW 354
A G++V ALEGGY + V A ++ LL+ + S E Y ++ +
Sbjct: 433 LANGRVVGALEGGYVRSVLGPCVSAVISSLLDRR----SPEQYRTQAAY 477
>gi|296476270|tpg|DAA18385.1| TPA: histone deacetylase 5 [Bos taurus]
Length = 1122
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 683 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 742
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 743 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 802
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L + +L
Sbjct: 803 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL---QQKL 859
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 860 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 917
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 918 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 977
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 978 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1023
>gi|114687051|ref|XP_515218.2| PREDICTED: histone deacetylase 10 isoform 2 [Pan troglodytes]
gi|410211908|gb|JAA03173.1| histone deacetylase 10 [Pan troglodytes]
Length = 669
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 214/362 (59%), Gaps = 6/362 (1%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRETQVLGKEELQ-ALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 299 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMVPCQSALESIQSARAAQAPHWKSLQ 358
Query: 373 DE 374
+
Sbjct: 359 QQ 360
>gi|22135465|gb|AAM93213.1|AF527612_1 histone deacetylase HDA110 isoform 2 [Zea mays]
gi|22135467|gb|AAM93214.1|AF527613_1 histone deacetylase HDA110 isoform 3 [Zea mays]
gi|414883632|tpg|DAA59646.1| TPA: histone deacetylase HDA110 isoform 2Histone deacetylase HDA110
isoform 3 isoform 1 [Zea mays]
gi|414883633|tpg|DAA59647.1| TPA: histone deacetylase HDA110 isoform 2Histone deacetylase HDA110
isoform 3 isoform 2 [Zea mays]
Length = 511
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 162/389 (41%), Positives = 219/389 (56%), Gaps = 26/389 (6%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + + HPE P+R++AI L AAGI P +C ++ +E + LL VH+
Sbjct: 101 FDERMLLHSELEVKPNPHPERPDRLRAIAASLAAAGIFPSKCALVPPREITKEELLMVHS 160
Query: 76 ENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+H+ + KN+ F S Y N S+ AA LAAG ++A + G
Sbjct: 161 PDHIESVEQTKNMLYSYFTS----------DTYANGHSACAAKLAAGLCADLASLIVSGR 210
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + FA+VRPPGHHA +AMGFCL+NN AVAA K+LIVDWDVHHGN
Sbjct: 211 VRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAKRAG----AKKVLIVDWDVHHGNG 266
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F D VL+ S+HRHE G FYP G +G G G+++N+PW G GD DY
Sbjct: 267 TQEIFDGDKTVLYISLHRHEDGNFYPGT--GAAHEVGVLDGQGFSVNIPWSRGGVGDDDY 324
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ + ++LP+A +F DI IISAGFDAA GDPLG C VTP GYS M L + G+++
Sbjct: 325 IFAFQTVVLPIASEFAADITIISAGFDAARGDPLGCCDVTPTGYSWMTSLLAGSSNGRLL 384
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
+ LEGGYNL SIS+S + VLL + P S P + + V K FWP L
Sbjct: 385 VILEGGYNLRSISSSATEVVKVLLGEGPNRASFVVSPSKEALSTVSQVLKIQQQFWPVLG 444
Query: 373 DELPTKLTSLKAPPAHMISSSDSEDEDTK 401
PT SL+A + S+ +E + K
Sbjct: 445 ---PT-YASLQAQQGSVSSNHSNELKKRK 469
>gi|336261529|ref|XP_003345552.1| hypothetical protein SMAC_06205 [Sordaria macrospora k-hell]
gi|380094777|emb|CCC07278.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 614
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 225/429 (52%), Gaps = 51/429 (11%)
Query: 11 IKRR----VGLLYDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI---------- 53
+KRR G YD+RM H D +HPE+P+RI+ I + G+
Sbjct: 66 LKRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEHIMRIFKREGLVFTGNDEDLK 125
Query: 54 ------PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL 106
P+R + + A+ A + + VH H ++N L+S+Y+
Sbjct: 126 KVIRTDPRRYMWRIPARHATKEEICLVHHPEHFRWVEN----------------LDSLYV 169
Query: 107 NEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAAS 166
+ EA+ ++AG IE + V G + +AFA++RPPGHHAE D+ MGFCL+NNV +AA
Sbjct: 170 GSMTFEASLISAGGAIETCKSVVVGNVKNAFAVIRPPGHHAEFDQPMGFCLFNNVPIAAK 229
Query: 167 FLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA------N 220
E PE+ K+LI+DWDVHHGN Q MF+ DP +L+ S+H + G+FYP
Sbjct: 230 ICQTEYPEI-CRKVLILDWDVHHGNGIQNMFYDDPNILYISLHVYMNGSFYPGKPDNPMT 288
Query: 221 DDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDA 280
DG G G GLG N+N+ W + GD +Y+A + I++P+A +F PD++IISAGFDA
Sbjct: 289 PDGSIENCGAGVGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFDPDLVIISAGFDA 348
Query: 281 AAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
A GD LG C V+P Y+ M LM A GK+ + LEGGYNL +IS S LA + + P
Sbjct: 349 ADGDELGACFVSPTCYAHMTHMLMSLANGKVAVCLEGGYNLEAISKSALAVAQLHAQPDP 408
Query: 341 VAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDT 400
+ S + + T + Q ++ + +P +T P S + DE T
Sbjct: 409 LDNSLQPHDSWITDSIPQYIKWAIDRNIGVFDINIPQYITH----PEDTESFAPKVDERT 464
Query: 401 KVETLEAVL 409
+ ++ ++
Sbjct: 465 QQAQIQELM 473
>gi|456752982|gb|JAA74071.1| histone deacetylase 5 [Sus scrofa]
Length = 1116
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 213/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 677 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 736
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 737 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 796
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L + +L
Sbjct: 797 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL---QQKL 853
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 854 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 911
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 912 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 971
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 972 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1017
>gi|20070354|ref|NP_114408.3| histone deacetylase 10 isoform 1 [Homo sapiens]
gi|27734403|sp|Q969S8.1|HDA10_HUMAN RecName: Full=Histone deacetylase 10; Short=HD10
gi|15082078|gb|AAK84023.1|AF393962_1 histone deacetylase 10 isoform b [Homo sapiens]
gi|16903566|gb|AAL30513.1|AF426160_1 histone deacetylase 10 [Homo sapiens]
gi|47678461|emb|CAG30351.1| dJ402G11.7 [Homo sapiens]
gi|109451170|emb|CAK54446.1| HDAC10 [synthetic construct]
gi|109451748|emb|CAK54745.1| HDAC10 [synthetic construct]
gi|115527737|gb|AAI25084.1| Histone deacetylase 10 [Homo sapiens]
gi|119593924|gb|EAW73518.1| histone deacetylase 10, isoform CRA_h [Homo sapiens]
gi|208967873|dbj|BAG72582.1| histone deacetylase 10 [synthetic construct]
Length = 669
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 212/362 (58%), Gaps = 6/362 (1%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRE-TQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH + A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 299 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQ 358
Query: 373 DE 374
+
Sbjct: 359 QQ 360
>gi|410056446|ref|XP_003317503.2| PREDICTED: histone deacetylase 6 [Pan troglodytes]
Length = 1266
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/361 (38%), Positives = 203/361 (56%), Gaps = 5/361 (1%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+ DE++ + + D PE R+ AI +L G+ RCV A+ A+ + L+ VH
Sbjct: 100 TGLVLDEQLNEFHCLWDDSFPEGLERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVH 159
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +++L++ R +A +S+YL+ S A LA+GSV+ + + V E+
Sbjct: 160 SLEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIR 218
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNE----RPELGINKILIVDWDVHHG 190
+ AI+RPPGHHA+ G+C++N+VAVAA + + R LIVDWDVHHG
Sbjct: 219 NGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRSATEGRWFLIVDWDVHHG 278
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DA
Sbjct: 279 QGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDA 338
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY+A + H+LLPVA +F P +++++AGFDA GDP G TP G++ + LM A GK
Sbjct: 339 DYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGK 398
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPT 370
++L+LEGGYNL +++ V A ++ LL D S P S + + L FW
Sbjct: 399 LILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEV 458
Query: 371 L 371
L
Sbjct: 459 L 459
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 159/267 (59%), Gaps = 14/267 (5%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
++ R GL+YD+ M H +HPE P RI I +L+ G+ RC+ L + A + L
Sbjct: 498 LQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAEL 557
Query: 71 LSVHTENHVNLIKNISSKQFDSRR-DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
L+ H+ +V ++ ++++ +R R +S +SIY+ + A LA G+ + E V
Sbjct: 558 LTCHSAEYVGHLR--ATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVL 615
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN----KILIVDW 185
GE+ + A+VRPPGHHAE D A GFC +N+VAVAA R I+ +ILIVDW
Sbjct: 616 SGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAA------RHAQAISGHALRILIVDW 669
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVHHGN TQ MF DP VL+ S+HR++ GTF+P D+G + IG G G+ +NV W
Sbjct: 670 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 729
Query: 246 RCGDADYLAVWDHILLPVAKDF-GPDI 271
R GDADYLA W ++LP+A + GP +
Sbjct: 730 RMGDADYLAAWHRLVLPIAYEMPGPHL 756
>gi|348513065|ref|XP_003444063.1| PREDICTED: histone deacetylase 10-like [Oreochromis niloticus]
Length = 590
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 205/372 (55%), Gaps = 8/372 (2%)
Query: 16 GLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
L+YD+ M K+ D E P R+ L G+ RCV + +EA D +L
Sbjct: 4 ALIYDDEMTKYKLLWVDPACKIEVPERLTVSHEALVRTGLADRCVSVPVREATDAEILLA 63
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+E ++ +K + + + + +Y + A LAAG+ +++ + V G++
Sbjct: 64 HSEEYLEAVKKTPYMSLEDLME-LTRQYGDVYFHPNIYHCAKLAAGAALQLVDSVMTGKV 122
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ A+VRPPGHH+ A GFC++NNVA+AA + + + G+ ++LIVDWD+HHG
Sbjct: 123 RNGMALVRPPGHHSMRSAANGFCVFNNVAIAARY---AKQKYGVRRVLIVDWDIHHGQGV 179
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F DP VL+FS HR+E F+P + Y ++G+ G G+NINVPW + DYL
Sbjct: 180 QYCFEDDPSVLYFSWHRYEHQKFWPHLRNSDYDIVGKEKGAGFNINVPWNKVGMENGDYL 239
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+V+ H+LLPVA +F PD++++ AGFD+A GDP G TP ++ + LM+ A GK+
Sbjct: 240 SVFCHVLLPVAYEFCPDLVLVCAGFDSAIGDPEGEMCATPDVFAHLTHLLMNLAGGKLCA 299
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL-- 371
LEGGYNL S++ SV + LL D +S P S +Q VR A+W L
Sbjct: 300 VLEGGYNLTSLAQSVCQTVQTLLGDPVPRPASLNSPCISALESLQCVRSAHKAYWSCLKH 359
Query: 372 ADELPTKLTSLK 383
A +LPT S K
Sbjct: 360 AADLPTSTISTK 371
>gi|410250972|gb|JAA13453.1| histone deacetylase 10 [Pan troglodytes]
gi|410305904|gb|JAA31552.1| histone deacetylase 10 [Pan troglodytes]
gi|410337563|gb|JAA37728.1| histone deacetylase 10 [Pan troglodytes]
Length = 669
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 214/362 (59%), Gaps = 6/362 (1%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRETQVLGKEELQ-ALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 299 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMVPCQSALESIQSARAAQAPHWKSLQ 358
Query: 373 DE 374
+
Sbjct: 359 QQ 360
>gi|15213865|gb|AAK92205.1|AF407272_1 histone deacetylase 10 isoform alpha [Homo sapiens]
Length = 669
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 212/362 (58%), Gaps = 6/362 (1%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRE-TQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH + A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 299 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQ 358
Query: 373 DE 374
+
Sbjct: 359 QQ 360
>gi|355568759|gb|EHH25040.1| hypothetical protein EGK_08794 [Macaca mulatta]
Length = 1089
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 650 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 709
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ D+++ I+ K+ ++ G SS A
Sbjct: 710 VHSEYHTLLYGTSPLNRQKLDNKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 769
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 770 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 826
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 827 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 884
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 885 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 944
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 945 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 990
>gi|384475763|ref|NP_001245027.1| histone deacetylase 5 [Macaca mulatta]
gi|383408153|gb|AFH27290.1| histone deacetylase 5 isoform 3 [Macaca mulatta]
Length = 1123
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 684 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 743
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ D+++ I+ K+ ++ G SS A
Sbjct: 744 VHSEYHTLLYGTSPLNRQKLDNKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 803
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 804 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 860
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 861 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 918
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 919 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 978
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 979 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1024
>gi|194216834|ref|XP_001490721.2| PREDICTED: histone deacetylase 5-like isoform 2 [Equus caballus]
Length = 1116
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 677 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 736
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 737 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 796
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L + +L
Sbjct: 797 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL---QQKL 853
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 854 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 911
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 912 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 971
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 972 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1017
>gi|426238163|ref|XP_004013026.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 5 [Ovis aries]
Length = 1112
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 673 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 732
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 733 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 792
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L + +L
Sbjct: 793 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL---QQKL 849
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 850 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 907
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 908 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 967
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 968 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1013
>gi|355785104|gb|EHH65955.1| hypothetical protein EGM_02833 [Macaca fascicularis]
Length = 671
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 211/359 (58%), Gaps = 6/359 (1%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA + L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASKEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRK-TQVLGEEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++ILIVDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHSQSAAANGFCVFNNVAIAAA---HAKQKHGLHRILIVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + L A G++
Sbjct: 239 AAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTHLLQVLAGGRVC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D S P +S IQ+ R + +W +L
Sbjct: 299 AMLEGGYHLESLAESVCMTVQALLGDPAPPLSGLMVPCQSALESIQSARAAQAPYWKSL 357
>gi|440895481|gb|ELR47654.1| Histone deacetylase 5, partial [Bos grunniens mutus]
Length = 1187
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 213/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 748 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 807
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 808 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 867
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L +L
Sbjct: 868 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQ---KL 924
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 925 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 982
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 983 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 1042
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 1043 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1088
>gi|402900481|ref|XP_003913203.1| PREDICTED: histone deacetylase 5 [Papio anubis]
Length = 1114
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 675 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 734
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ D+++ I+ K+ ++ G SS A
Sbjct: 735 VHSEYHTLLYGTSPLNRQKLDNKKLLGPISQKIYAVLPCGGIGVDSDTVWNEMHSSSAVR 794
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 795 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 851
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 852 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 909
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 910 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 969
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 970 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1015
>gi|397479547|ref|XP_003811075.1| PREDICTED: histone deacetylase 10 isoform 1 [Pan paniscus]
Length = 669
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 213/362 (58%), Gaps = 6/362 (1%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRE-TQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 299 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMVPCQSALESIQSARAAQAPHWKSLQ 358
Query: 373 DE 374
+
Sbjct: 359 HQ 360
>gi|46116964|ref|XP_384500.1| hypothetical protein FG04324.1 [Gibberella zeae PH-1]
Length = 802
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 214/400 (53%), Gaps = 50/400 (12%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----------- 53
RR GLL YD+RM H D +HPE+P RI I+ + G+
Sbjct: 58 RRRGLLPTGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKKVGLVYTGPEAELPR 117
Query: 54 -----PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNIS----------SKQFDSRRDRI 97
P R + + A+ A + + H+ H + ++ + +KQ+D R+
Sbjct: 118 IMRECPTRYMWRIPARAATREEICLAHSPEHFDWVERLDKMSTAELRDLTKQYDQGRE-- 175
Query: 98 ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCL 157
S+Y+ S AA L+AG IE + V G++ +AFA++RPPGHHAE D MGFC
Sbjct: 176 -----SLYVGSMSYPAALLSAGGAIETCKNVVIGQVKNAFAVIRPPGHHAEWDGPMGFCF 230
Query: 158 YNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFY 217
+NNV VA + P++ K+LI+DWDVHHGN Q +F+ DP VL+ S+H ++ G FY
Sbjct: 231 FNNVPVAVRVCQQDYPKI-CRKVLILDWDVHHGNGVQNIFYNDPNVLYISLHVYQNGIFY 289
Query: 218 PA------NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
P DG G GLG NIN+ W + GD +Y+A + I++P+AK+F PD+
Sbjct: 290 PGKPPNSMTPDGGIEHCGSEAGLGKNINIGWHDQGMGDGEYMAAFQKIIMPIAKEFDPDL 349
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLAC 331
++ISAGFDAA GD LGGC V+P Y+ M LM A GK+ + LEGGYNL +IS S +A
Sbjct: 350 VVISAGFDAADGDELGGCFVSPACYAHMTHMLMSLADGKVAVCLEGGYNLKAISVSAVAV 409
Query: 332 MNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
L+ + P E+ R++ V+ + +W +
Sbjct: 410 AKTLMGEPPPRLELPKINKEAA-RILAKVQSLQAPYWECM 448
>gi|380808506|gb|AFE76128.1| histone deacetylase 5 isoform 3 [Macaca mulatta]
Length = 1119
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 680 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 739
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ D+++ I+ K+ ++ G SS A
Sbjct: 740 VHSEYHTLLYGTSPLNRQKLDNKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 799
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 800 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 856
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 857 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 914
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 915 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 974
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 975 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1020
>gi|414883634|tpg|DAA59648.1| TPA: hypothetical protein ZEAMMB73_114812 [Zea mays]
Length = 512
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 162/390 (41%), Positives = 218/390 (55%), Gaps = 27/390 (6%)
Query: 19 YDERMCKHNTP---DGDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVH 74
+DERM H+ + HPE P+R++AI L AAGI P +C ++ +E + LL VH
Sbjct: 101 FDERMLLHSEQLEVKPNPHPERPDRLRAIAASLAAAGIFPSKCALVPPREITKEELLMVH 160
Query: 75 TENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
+ +H+ + KN+ F S Y N S+ AA LAAG ++A + G
Sbjct: 161 SPDHIESVEQTKNMLYSYFTS----------DTYANGHSACAAKLAAGLCADLASLIVSG 210
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+ + FA+VRPPGHHA +AMGFCL+NN AVAA K+LIVDWDVHHGN
Sbjct: 211 RVRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAKRAG----AKKVLIVDWDVHHGN 266
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ++F D VL+ S+HRHE G FYP G +G G G+++N+PW G GD D
Sbjct: 267 GTQEIFDGDKTVLYISLHRHEDGNFYPGT--GAAHEVGVLDGQGFSVNIPWSRGGVGDDD 324
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
Y+ + ++LP+A +F DI IISAGFDAA GDPLG C VTP GYS M L + G++
Sbjct: 325 YIFAFQTVVLPIASEFAADITIISAGFDAARGDPLGCCDVTPTGYSWMTSLLAGSSNGRL 384
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
++ LEGGYNL SIS+S + VLL + P S P + + V K FWP L
Sbjct: 385 LVILEGGYNLRSISSSATEVVKVLLGEGPNRASFVVSPSKEALSTVSQVLKIQQQFWPVL 444
Query: 372 ADELPTKLTSLKAPPAHMISSSDSEDEDTK 401
PT SL+A + S+ +E + K
Sbjct: 445 G---PT-YASLQAQQGSVSSNHSNELKKRK 470
>gi|408399189|gb|EKJ78313.1| hypothetical protein FPSE_01499 [Fusarium pseudograminearum CS3096]
Length = 734
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 214/400 (53%), Gaps = 50/400 (12%)
Query: 13 RRVGLL-----YDERMCKHNTPD---GDYHPENPNRIKAIWNKLQAAGI----------- 53
RR GLL YD+RM H D +HPE+P RI I+ + G+
Sbjct: 58 RRRGLLPTGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKKVGLVYTGPEAELPR 117
Query: 54 -----PQRCV-VLNAKEAKDKNLLSVHTENHVNLIKNIS----------SKQFDSRRDRI 97
P R + + A+ A + + H+ H + ++ + +KQ+D R+
Sbjct: 118 IMRECPTRYMWRIPARAATREEICLAHSPEHFDWVERLDKMSTAELRDLTKQYDQGRE-- 175
Query: 98 ASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCL 157
S+Y+ S AA L+AG IE + V G++ +AFA++RPPGHHAE D MGFC
Sbjct: 176 -----SLYVGSMSYPAALLSAGGAIETCKNVVIGQVKNAFAVIRPPGHHAEWDGPMGFCF 230
Query: 158 YNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFY 217
+NNV VA + P++ K+LI+DWDVHHGN Q +F+ DP VL+ S+H ++ G FY
Sbjct: 231 FNNVPVAVRVCQQDYPKI-CRKVLILDWDVHHGNGVQNIFYNDPNVLYISLHVYQNGIFY 289
Query: 218 PA------NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
P DG G GLG NIN+ W + GD +Y+A + I++P+AK+F PD+
Sbjct: 290 PGKPPNSMTPDGSIEHCGSEAGLGKNINIGWHDQGMGDGEYMAAFQKIIMPIAKEFDPDL 349
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLAC 331
++ISAGFDAA GD LGGC V+P Y+ M LM A GK+ + LEGGYNL +IS S +A
Sbjct: 350 VVISAGFDAADGDELGGCFVSPACYAHMTHMLMSLADGKVAVCLEGGYNLKAISVSAVAV 409
Query: 332 MNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
L+ + P E+ R++ V+ + +W +
Sbjct: 410 AKTLMGEPPPRLELPKINKEAA-RILAKVQSLQAPYWECM 448
>gi|417413564|gb|JAA53102.1| Putative histone deacetylase complex catalytic component hda1,
partial [Desmodus rotundus]
Length = 1157
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 214/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 718 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 777
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++++ SS A
Sbjct: 778 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVR 837
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L + +L
Sbjct: 838 MAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL---QQKL 894
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 895 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 952
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 953 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDMVLVSAGFDAVEGHLSPLGGYS 1012
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 1013 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1058
>gi|3170182|gb|AAC18040.1| antigen NY-CO-9, partial [Homo sapiens]
Length = 897
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 214/347 (61%), Gaps = 29/347 (8%)
Query: 17 LLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +VH
Sbjct: 497 VVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVH 556
Query: 75 TENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAYLA 117
+E H L ++ ++ DS++ I+ K+ ++ G SS A +A
Sbjct: 557 SEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVRMA 616
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L +
Sbjct: 617 VGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKLNV 673
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+GYN
Sbjct: 674 GKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYN 731
Query: 238 INVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVT 292
+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG VT
Sbjct: 732 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVT 791
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
+ + ++LM A G++VLALEGG++L +I ++ AC++ LL K
Sbjct: 792 ARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVK 838
>gi|384248768|gb|EIE22251.1| hypothetical protein COCSUDRAFT_66525 [Coccomyxa subellipsoidea
C-169]
Length = 766
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 201/360 (55%), Gaps = 21/360 (5%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
VGL+YD+ M +H P H E P R A+ KL+AAG+ RC L ++A+D+ L+ H
Sbjct: 387 VGLVYDKIMEEHVGPPS--HVERPQRTAALVQKLKAAGLAARCWTLPPRQARDEELVLAH 444
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
TE HV + D ++ Y + AA AAG ++ E V G +
Sbjct: 445 TEAHV--------RHIDGPPKEDEWQIGDNYYTAATPIAARTAAGCTVQAVEAVCSGRVQ 496
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
AFA+VRPPGHHAE AMGFC YNNVAVAA G+ K+L++DWDVHHGN +
Sbjct: 497 RAFAVVRPPGHHAECARAMGFCFYNNVAVAALAARRL----GVKKVLVLDWDVHHGNGIE 552
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
++ + V++ S+HR FYP D +G+ G G+N+N+P+ G DADY+A
Sbjct: 553 EILYNRGDVMYISLHRGN--GFYPGTGD--VQDVGKNEGRGFNLNIPFPRGGFNDADYIA 608
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF-AQGKIVL 313
+D +L PV + F PD+II+SAGFDA GDPLGG +TP Y M +L A GK+VL
Sbjct: 609 AFDLVLEPVIRAFAPDLIIVSAGFDAVQGDPLGGMNLTPQVYGHMTDRLSRLAADGKLVL 668
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEA--YPFESTWRVIQAVRKKLSAFWPTL 371
ALEGGYNL + C+ VLL +KPV S P + T V+ V S FWP L
Sbjct: 669 ALEGGYNLRMTAECGADCVKVLLGEKPVPLDSRGAWRPAKETEHVLAEVAAAHSPFWPVL 728
>gi|336384316|gb|EGO25464.1| hypothetical protein SERLADRAFT_465667 [Serpula lacrymans var.
lacrymans S7.9]
Length = 554
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 161/238 (67%), Gaps = 3/238 (1%)
Query: 103 SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVA 162
S+Y+ G+ AA L+ G VIE VA GEL FAIVRPPGHHAEPDE MGFC +NNVA
Sbjct: 17 SVYVVNGTPAAARLSCGGVIEACLAVARGELKKTFAIVRPPGHHAEPDEHMGFCFFNNVA 76
Query: 163 VAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD 222
+A + P + KILI+DWDVHHGN TQ+ F+ DP VL+ S+HR+E G FYP
Sbjct: 77 IATRVVQLLTP---MKKILILDWDVHHGNGTQRAFYDDPSVLYISLHRYESGQFYPCGTF 133
Query: 223 GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAA 282
G GEGPGLGY++N+PW DADY+ + +++P+A +F PD++IISAGFDAA
Sbjct: 134 GSMVSCGEGPGLGYSVNIPWPEKGMTDADYIHAFQQVVMPIAMEFSPDLVIISAGFDAAD 193
Query: 283 GDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
GD LG C VTP G++ M L A G++V+ALEGGYN+ + ++S +A V+L + P
Sbjct: 194 GDELGECHVTPTGFAHMTHMLASLAGGRLVVALEGGYNMDASASSAVAVARVILGEAP 251
>gi|164662747|ref|XP_001732495.1| hypothetical protein MGL_0270 [Malassezia globosa CBS 7966]
gi|159106398|gb|EDP45281.1| hypothetical protein MGL_0270 [Malassezia globosa CBS 7966]
Length = 627
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/233 (51%), Positives = 160/233 (68%), Gaps = 6/233 (2%)
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
+S+YLN S+ A L+ GSV+E+ VA G +++ FAIVRPPGHHAEP GFCLYNNV
Sbjct: 48 SSLYLNHASTFCARLSCGSVVEMCSAVASGRVHNGFAIVRPPGHHAEPGAGFGFCLYNNV 107
Query: 162 AVAASFLLNERPELG----INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFY 217
AV+ LL +RP LG + +++I+DWDVHHGN TQ+ FW + +VL+ S+HR+E GTFY
Sbjct: 108 AVSTRVLL-DRP-LGAPDRVERVMILDWDVHHGNGTQRAFWDNKQVLYISLHRYENGTFY 165
Query: 218 PANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAG 277
P G Y +G G ++NVPW D DYL + H ++P+A +F PD++I+SAG
Sbjct: 166 PGTSFGNYDQVGGESARGTSVNVPWPCSGMDDGDYLHAFQHCIMPIAYEFAPDLVIVSAG 225
Query: 278 FDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLA 330
FDAA D LGGC V+P GY+ M +LM AQG +V+ALEGGY L +IS S LA
Sbjct: 226 FDAAQDDMLGGCLVSPAGYAHMTHQLMALAQGNLVVALEGGYTLDAISRSALA 278
>gi|75054940|sp|Q5R902.1|HDAC5_PONAB RecName: Full=Histone deacetylase 5; Short=HD5
gi|55730067|emb|CAH91758.1| hypothetical protein [Pongo abelii]
Length = 1122
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 213/346 (61%), Gaps = 29/346 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++ W++LQ G+ +C + ++A + +
Sbjct: 683 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSTWSRLQETGLLSKCERIRGRKATLDEIQT 742
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 743 VHSEYHTLLYGTSPLNRQKVDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 802
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 803 MAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 859
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 860 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 917
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 918 YNVNVAWIGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 977
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 978 VTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1023
>gi|41054267|ref|NP_956069.1| histone deacetylase 10 [Danio rerio]
gi|27882109|gb|AAH44446.1| Zgc:55652 [Danio rerio]
Length = 676
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 132/358 (36%), Positives = 204/358 (56%), Gaps = 6/358 (1%)
Query: 16 GLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
L++DE M ++ D E P R+ + L+ G+ QRC + ++A ++ +L
Sbjct: 6 ALIFDEEMSRYKLLWTDPACEIEVPERLTVSYEALRTHGLAQRCKAVPVRQATEQEILLA 65
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+E ++ +K + + K N +Y ++ A LAAG+ +++ + V + E+
Sbjct: 66 HSEEYLEAVKQTPGMNVEELM-AFSKKYNDVYFHQNIYHCAKLAAGATLQLVDSVMKREV 124
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ A+VRPPGHH++ A GFC++NNVA AA L + +N+ILIVDWDVHHG
Sbjct: 125 RNGMALVRPPGHHSQRSAANGFCVFNNVAFAA---LYAKKNYNLNRILIVDWDVHHGQGI 181
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F +DP VL+FS HR+E +F+P + Y+ +G+G G G+NIN+PW ++DYL
Sbjct: 182 QYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYSSVGKGKGSGFNINLPWNKVGMTNSDYL 241
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + H+LLPVA +F P+++I+SAGFD+A GDP G P ++ + LM A GK+ +
Sbjct: 242 AAFFHVLLPVAYEFDPELVIVSAGFDSAIGDPEGEMCALPEIFAHLTHLLMPLAAGKMCV 301
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGYNL S+ SV ++ LL D S +S IQ VR S++W +
Sbjct: 302 VLEGGYNLTSLGQSVCQTVHSLLGDPTPRISGLGTACDSALESIQNVRNVQSSYWSSF 359
>gi|426394917|ref|XP_004063729.1| PREDICTED: histone deacetylase 10 isoform 1 [Gorilla gorilla
gorilla]
Length = 669
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 212/359 (59%), Gaps = 6/359 (1%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRE-TQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D S P +S I++ R + W +L
Sbjct: 299 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMVPCQSALESIRSARAAQAPHWKSL 357
>gi|259089444|ref|NP_954668.2| histone deacetylase 10 [Mus musculus]
gi|408360128|sp|Q6P3E7.2|HDA10_MOUSE RecName: Full=Histone deacetylase 10; Short=HD10
gi|148672428|gb|EDL04375.1| histone deacetylase 10, isoform CRA_d [Mus musculus]
Length = 666
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 223/394 (56%), Gaps = 19/394 (4%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A + L+ G+ +RC+ L+A EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEERCLCLSACEASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASK-LNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VH+ ++ L++ ++ D SK N++Y + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYIALVQK--TQTLDKEELHALSKQYNAVYFHPDTFHCARLAAGAALQLVDAVLTG 120
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+++ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 121 AVHNGLALVRPPGHHSQRAAANGFCVFNNVALAAK---HAKQKYGLQRILIVDWDVHHGQ 177
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
Q +F DP VL+FS HR+E G+F+P + +G+G G G+ +N+PW G+AD
Sbjct: 178 GIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQVGMGNAD 237
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G+I
Sbjct: 238 YLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRI 297
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D P +S IQ+V+ + +W
Sbjct: 298 CAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQSALESIQSVQTAQTPYW--- 354
Query: 372 ADELPTKLTSLKAPPAHMISSSDSEDEDTKVETL 405
TSL+ A ++SSS E+ + L
Sbjct: 355 --------TSLQQNVAPVLSSSTHSPEERSLRLL 380
>gi|336371557|gb|EGN99896.1| hypothetical protein SERLA73DRAFT_180181 [Serpula lacrymans var.
lacrymans S7.3]
Length = 375
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 161/238 (67%), Gaps = 3/238 (1%)
Query: 103 SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVA 162
S+Y+ G+ AA L+ G VIE VA GEL FAIVRPPGHHAEPDE MGFC +NNVA
Sbjct: 17 SVYVVNGTPAAARLSCGGVIEACLAVARGELKKTFAIVRPPGHHAEPDEHMGFCFFNNVA 76
Query: 163 VAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD 222
+A + P + KILI+DWDVHHGN TQ+ F+ DP VL+ S+HR+E G FYP
Sbjct: 77 IATRVVQLLTP---MKKILILDWDVHHGNGTQRAFYDDPSVLYISLHRYESGQFYPCGTF 133
Query: 223 GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAA 282
G GEGPGLGY++N+PW DADY+ + +++P+A +F PD++IISAGFDAA
Sbjct: 134 GSMVSCGEGPGLGYSVNIPWPEKGMTDADYIHAFQQVVMPIAMEFSPDLVIISAGFDAAD 193
Query: 283 GDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
GD LG C VTP G++ M L A G++V+ALEGGYN+ + ++S +A V+L + P
Sbjct: 194 GDELGECHVTPTGFAHMTHMLASLAGGRLVVALEGGYNMDASASSAVAVARVILGEAP 251
>gi|332243269|ref|XP_003270803.1| PREDICTED: histone deacetylase 5 [Nomascus leucogenys]
Length = 1124
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 212/348 (60%), Gaps = 31/348 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 683 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQKTGLLSKCERIRGRKATLDEIQT 742
Query: 73 VHTENHVNL--IKNISSKQFDSRR-----------------DRIASKLNSIYLNEGSSEA 113
VH+E H L ++ ++ DS++ + ++++ SS A
Sbjct: 743 VHSEYHTLLYGTSPLNRQKLDSKKLLGELAHGRAGGHVHCQGGMGVDSDTVWNEMHSSSA 802
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L +
Sbjct: 803 VRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQ 859
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
+L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG
Sbjct: 860 KLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAAEEVGGGPG 917
Query: 234 LGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGG 288
+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 918 VGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGG 977
Query: 289 CRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 978 YSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1025
>gi|308478311|ref|XP_003101367.1| CRE-HDAC-6 protein [Caenorhabditis remanei]
gi|308263268|gb|EFP07221.1| CRE-HDAC-6 protein [Caenorhabditis remanei]
Length = 541
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 205/366 (56%), Gaps = 13/366 (3%)
Query: 19 YDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA-KEAKDKNLLSVHTEN 77
++E +H HPE+ +RI+ I LQ + ++C VL + E D +L H ++
Sbjct: 19 FNESQNEHENTVCPKHPESSDRIQKIKEALQQTKVLEKCHVLTSFLEIDDADLELTHAKS 78
Query: 78 HVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
V + K + ++ +S+ K +SI++ E S + A V ++ R+ GE
Sbjct: 79 MVKEMVESKTKTQEEINSQ----CEKYDSIFMTENSIKVAKDGIACVRDLTNRIMLGEAM 134
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ FA++RPPGHHA+ + GFC++NNVA AA E G +ILIVD DVHHG TQ
Sbjct: 135 NGFAVIRPPGHHADSSQPCGFCIFNNVAQAAE----EAFFNGAERILIVDLDVHHGQGTQ 190
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
++F++D RVL+FS+HR+E G ++P + + IG G GLGYN N+P C D+DYL+
Sbjct: 191 RIFYEDKRVLYFSIHRYEHGVYWPHLPESDFDHIGAGVGLGYNANIPLNETGCTDSDYLS 250
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ HILLP+A F P +IISAGFD+ GDPLGG +TP GYS + L AQG++++
Sbjct: 251 ILFHILLPLATQFDPHFVIISAGFDSLIGDPLGGMLLTPDGYSHFIYHLKSLAQGRLLVV 310
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGYN + + C+ VLL P S E P EST + L W D
Sbjct: 311 LEGGYNHQMSAVAAQKCVRVLLGHAPYPASMEEPPKESTVTSCVNLASVLRHHWNCF-DY 369
Query: 375 LPTKLT 380
P++ T
Sbjct: 370 FPSRAT 375
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 32 DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE-AKDKNLLSVHTENHVNLIKNISSKQF 90
D HPE P R + I L+ +G+ ++C+ N++ A D+ + VHT+ ++ +K + +
Sbjct: 444 DNHPEKPARTRRILKTLKESGVLEKCIEKNSERVATDEEIRMVHTKKMLDHLKKTETMKD 503
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV 124
+ + + NSI+L + + A A G+V+EV
Sbjct: 504 EELMEEAEKEFNSIFLTRDTLKVARKAVGAVLEV 537
>gi|356565230|ref|XP_003550845.1| PREDICTED: histone deacetylase 15-like [Glycine max]
Length = 547
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H + HPE P+R++AI L AGI P +C + A+E + L++VH+
Sbjct: 156 FDERMLLHAEVEKKSTLHPERPDRLQAIAASLARAGIFPGKCYSIPAREITPEELITVHS 215
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
H+ ++ S + ++S S Y NE S+ AA LAAG ++A +
Sbjct: 216 LEHIESVEVTS--------ESLSSYFTSDTYANEHSALAARLAAGLCADLASAIVSERAK 267
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ FA+VRPPGHHA AMGFCL+NN AVAA K+LI+DWDVHHGN TQ
Sbjct: 268 NGFALVRPPGHHAGVRHAMGFCLHNNAAVAALAAQAAG----ARKVLILDWDVHHGNGTQ 323
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
++F ++ VL+ S+HRHE G FYP G +G GY +N+PW G GD DY+
Sbjct: 324 EIFEQNKSVLYISLHRHEGGKFYPGT--GAAEEVGSMGAEGYCVNIPWSRGGVGDNDYIF 381
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H++LP+A +F PD I+SAGFDAA GDPLG C +TP GY+ M L + GK+++
Sbjct: 382 SFQHVVLPIAAEFNPDFTIVSAGFDAARGDPLGCCDITPSGYAHMTHMLNALSGGKLLVI 441
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGYNL SIS+S A + VLL + P ++P ++ + + V K FWP L
Sbjct: 442 LEGGYNLRSISSSATAVIKVLLGESPGCELENSFPSKAGLQTVLEVLKIQMNFWPALG 499
>gi|395820200|ref|XP_003783462.1| PREDICTED: histone deacetylase 10 [Otolemur garnettii]
Length = 736
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/360 (35%), Positives = 212/360 (58%), Gaps = 6/360 (1%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M H D + E P R+ A ++L+ G+ QRC+ L+A+EA + L VH
Sbjct: 5 LVYHEDMMGHELLWDDPECKIEGPQRLSAALDRLRQCGLEQRCLQLSAREASEAELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ ++ LI + ++ ++ + +++Y + + A LAAG+ +++ + V G ++
Sbjct: 65 SPEYIALIHGTQVLGKEELQE-LSGQYDAVYFHPSTFHCARLAAGAALQLVDAVLTGAVH 123
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWD+HHG Q
Sbjct: 124 NGLALVRPPGHHSQRAAANGFCVFNNVAIAAE---HAKQKHGLCRILIVDWDIHHGQGIQ 180
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G+G G G+ +N+PW G+ADY+A
Sbjct: 181 YIFEDDPSVLYFSWHRYEHGRFWPFLRESNADAVGQGRGRGFTVNLPWNQVGMGNADYMA 240
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 241 AFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAV 300
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGY+L S++ SV + LL D P +S IQ+VR + W +L +
Sbjct: 301 LEGGYHLESLAESVCMTVQALLGDPAPLLLGPLMPCQSALESIQSVRAVQAPHWLSLQQQ 360
>gi|118369564|ref|XP_001017986.1| Histone deacetylase family protein [Tetrahymena thermophila]
gi|89299753|gb|EAR97741.1| Histone deacetylase family protein [Tetrahymena thermophila SB210]
Length = 2774
Score = 254 bits (649), Expect = 1e-64, Method: Composition-based stats.
Identities = 139/370 (37%), Positives = 212/370 (57%), Gaps = 32/370 (8%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI---PQRCVVLNAKE 64
G I + G++YD KH + H E P R+++I+N L G+ P +V K
Sbjct: 2125 GLNINGQTGVVYDLEQLKHKSVR--QHVECPARLQSIFNHLTTQGLLKSPLVHIVDKLKP 2182
Query: 65 AKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV 124
A+ + H +N++ I+ + ++ +++ I + Y N+ S +AAYL G VIE
Sbjct: 2183 AEKSIVKYAHDDNYIEFIEGMWPEK--TKKKEIY--MLDTYFNQSSKDAAYLGVGGVIES 2238
Query: 125 AERVAEGELNSAFAIVRPPGHHA-EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIV 183
+R+ + +AF I+RPPGHH+ E GFC +NNVA+AA +L G+ K+LI
Sbjct: 2239 VDRIISKQWKNAFCIIRPPGHHSGESKVCTGFCFFNNVAIAAKYLQKNH---GVKKVLIF 2295
Query: 184 DWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE 243
DWD+HHG+ TQ +F DP VLF S+HRH+ G+FYP + G T G G G G+ IN+PW+
Sbjct: 2296 DWDIHHGDGTQHIFQDDPNVLFVSMHRHDDGSFYPQS--GSVTNNGSGEGKGFKINIPWD 2353
Query: 244 NG------RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
G G +Y+ ++ I P+ ++F P+ I+ISAGFD+A GDPLG C++T GY+
Sbjct: 2354 IGYSQNALTAGTDEYIYAFERIAFPIIQEFQPEFILISAGFDSAEGDPLGQCKLTYEGYA 2413
Query: 298 VMLKKLMDFAQGK-IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR- 355
+ ++LMD GK I++ LEGGYNL SIS + + + L + EA+P E R
Sbjct: 2414 YLTRRLMDITNGKNILVVLEGGYNLESISWAAESVLRTL--------TGEAFPLEKGQRK 2465
Query: 356 -VIQAVRKKL 364
IQ ++ ++
Sbjct: 2466 CSIQELKDRI 2475
>gi|196001687|ref|XP_002110711.1| hypothetical protein TRIADDRAFT_23354 [Trichoplax adhaerens]
gi|190586662|gb|EDV26715.1| hypothetical protein TRIADDRAFT_23354 [Trichoplax adhaerens]
Length = 453
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 230/399 (57%), Gaps = 42/399 (10%)
Query: 8 GRTIKRRVGLLYD----ERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAK 63
G + ++ G+ YD + MCK P H E+ R+++IW +L+ GI + C + +
Sbjct: 5 GLSGQQITGIAYDNIMQKHMCKCENPT--IHRESGGRLQSIWARLREVGILRYCEKIKTR 62
Query: 64 EAKDKNLLSVHTENHVN--LIKNISSKQFDSRR------DRIASKLNSIYLNEG------ 109
+A + L +VH+E +V+ L K + + D D + LN I L G
Sbjct: 63 KATTQELQTVHSEKYVSSYLDKMQVTAKTDHDELEVDVTDVSTNDLNLIRLPCGGLGIDS 122
Query: 110 --------SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
+ +AA +A G V+++A +VA GEL + AIVRPPGHHA D AMG C +N++
Sbjct: 123 ETVWDPCHTPKAARIAVGCVVDLATKVARGELRNGMAIVRPPGHHAGRDTAMGSCYFNSI 182
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND 221
A+ AS L + +L + K+LI DWD+HHGN TQ F++DP VL S+HR++ G F+P
Sbjct: 183 AITASIL---KQKLNLRKVLIFDWDIHHGNGTQNTFYEDPNVLTISIHRYDKGLFFPGT- 238
Query: 222 DGFYTMIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
G T +G G G G+N+NV W++G + GD +YLA + ++LP+AK F PDII++SAGF
Sbjct: 239 -GAITEVGNGSGTGFNVNVAWDSGSDVKMGDPEYLAAFRCVVLPIAKMFSPDIILVSAGF 297
Query: 279 DAAAGDPLGGC--RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
+A AG RV+P ++ M +KL++ KIVLALEGG++L +I ++ +CM LL
Sbjct: 298 NAVAGQAHENFNYRVSPACFANMTRKLIESINSKIVLALEGGHDLPAICDASESCMRALL 357
Query: 337 EDKPV-AGSSEAY---PFESTWRVIQAVRKKLSAFWPTL 371
P+ A SSE P ++ +V++ V + WP +
Sbjct: 358 LSDPMPAVSSEERNKEPNQAAVKVLEKVIQIQQEHWPQI 396
>gi|22135469|gb|AAM93215.1|AF527614_1 histone deacetylase HDA110 isoform 4 [Zea mays]
gi|414883631|tpg|DAA59645.1| TPA: histone deacetylase HDA110 isoform 4 [Zea mays]
Length = 407
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/389 (41%), Positives = 216/389 (55%), Gaps = 29/389 (7%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
LL+ E K N HPE P+R++AI L AAGI P +C ++ +E + LL VH+
Sbjct: 2 LLHSELEVKPNP-----HPERPDRLRAIAASLAAAGIFPSKCALVPPREITKEELLMVHS 56
Query: 76 ENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+H+ + KN+ F S Y N S+ AA LAAG ++A + G
Sbjct: 57 PDHIESVEQTKNMLYSYFTS----------DTYANGHSACAAKLAAGLCADLASLIVSGR 106
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + FA+VRPPGHHA +AMGFCL+NN AVAA K+LIVDWDVHHGN
Sbjct: 107 VRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAKRAG----AKKVLIVDWDVHHGNG 162
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F D VL+ S+HRHE G FYP G +G G G+++N+PW G GD DY
Sbjct: 163 TQEIFDGDKTVLYISLHRHEDGNFYPGT--GAAHEVGVLDGQGFSVNIPWSRGGVGDDDY 220
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+ + ++LP+A +F DI IISAGFDAA GDPLG C VTP GYS M L + G+++
Sbjct: 221 IFAFQTVVLPIASEFAADITIISAGFDAARGDPLGCCDVTPTGYSWMTSLLAGSSNGRLL 280
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
+ LEGGYNL SIS+S + VLL + P S P + + V K FWP L
Sbjct: 281 VILEGGYNLRSISSSATEVVKVLLGEGPNRASFVVSPSKEALSTVSQVLKIQQQFWPVLG 340
Query: 373 DELPTKLTSLKAPPAHMISSSDSEDEDTK 401
PT SL+A + S+ +E + K
Sbjct: 341 ---PT-YASLQAQQGSVSSNHSNELKKRK 365
>gi|403282797|ref|XP_003932825.1| PREDICTED: histone deacetylase 10 [Saimiri boliviensis boliviensis]
Length = 669
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 216/375 (57%), Gaps = 8/375 (2%)
Query: 16 GLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L V
Sbjct: 4 ALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRKCGLEQRCLRLSAREASEEELGLV 63
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+ +V+L++ + ++ + ++IY + + A LA G+ +++ + V G +
Sbjct: 64 HSPEYVSLVRE-TQVLGKEELQVLSGQFDAIYFHPSTFHCARLAVGAALQLVDAVLTGVV 122
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ A+VRPPGHH++ A GFC++NNVA+AA ++ + + G+++ILIVDWDVHHG
Sbjct: 123 QNGLALVRPPGHHSQRAAANGFCVFNNVAIAA---VHAKQKHGLHRILIVDWDVHHGQGI 179
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F DP +L+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+
Sbjct: 180 QYLFEDDPSILYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYV 239
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 240 AAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPACFAHLTQLLQVLAGGRVCA 299
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLAD 373
LEGGY+L S++ SV + LL D P +S IQ+ R + W +L
Sbjct: 300 VLEGGYHLESLAESVCMTVQTLLGDPAPPLPGPMVPCQSALESIQSARAAQAPHWRSL-- 357
Query: 374 ELPTKLTSLKAPPAH 388
+L L +P H
Sbjct: 358 QLQDVTPVLTSPSTH 372
>gi|391329901|ref|XP_003739405.1| PREDICTED: histone deacetylase 6-like [Metaseiulus occidentalis]
Length = 1260
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 199/328 (60%), Gaps = 8/328 (2%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRC---VVLNAKEAKDKNL 70
R L++D+RM +H P HPE+P+R +++ G+ +RC V ++A D L
Sbjct: 3 RTALIFDDRMDQHRCPWDSTHPESPDRFTESMKRIREYGLVERCKIGVEFQPRDATDDEL 62
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
++H++ ++ ++ + + + ++ SK +S+Y NE + + A AAG I++ + V
Sbjct: 63 RAIHSKKLIDNLRELKGCKDSEKMEQFCSKFDSVYANEHTVDLALSAAGCTIDLMKEVVN 122
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
+++ AI+RPPGHHA E G+CL+NNVA+AA + + +G+ ++LIVDWDVHHG
Sbjct: 123 RRVDNGMAIIRPPGHHAMEGEHCGYCLFNNVAIAAKYAVEH---MGLERVLIVDWDVHHG 179
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
++Q F+ DPRVL+FSVHR+E G+F+P + + IG G G G+N+NVP +
Sbjct: 180 QASQFSFYDDPRVLYFSVHRYEHGSFWPELRESNFDFIGSGRGTGFNVNVPLNKVGVENW 239
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DYL ++ HILLP+ +F P +I++S+GFDA+ GD G R+TP Y+ M L +A
Sbjct: 240 DYLNIFGHILLPMTAEFRPQLILVSSGFDASLGDLEGEMRLTPAMYAHMTHLLRPYA--P 297
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLED 338
+ + LEGGY + +++ V + LL D
Sbjct: 298 LCVVLEGGYCIPALAEGVALVLKTLLND 325
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 191/378 (50%), Gaps = 41/378 (10%)
Query: 29 PDGDYHP-ENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS 87
P DY+P ++P +A LQ + +R ++ A+E + S
Sbjct: 390 PTKDYYPKQSPAEKEAFAEALQR--LRERTDLIKAREP------------------FVES 429
Query: 88 KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHA 147
+ RDR K + + +EA LA G + +AE +L + A++RPPGHH+
Sbjct: 430 SALEDFRDRSCVKSHRFVRVKSLAEAKELARGPTFLLNFIIAE-KLTNGLALIRPPGHHS 488
Query: 148 EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFS 207
E F L+NNVA+AA + R + ++LIVDWD+ HG+ TQ F DPRVL+FS
Sbjct: 489 SKAEFSKFGLFNNVALAARHAVYVR---QLTRVLIVDWDIDHGHGTQYTFCNDPRVLYFS 545
Query: 208 VHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDF 267
+HR+E G+F+P + IG GY INVP + DYL ++ +L+P+A +F
Sbjct: 546 IHRYEHGSFWPQLRASNFDEIGRDTAKGYTINVPLNKVGLENWDYLPIFHQLLMPIAMEF 605
Query: 268 GPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNS 327
P++I++S GF AA GDP GG R+TP ++ M + L F G + + +EGGY + +++ S
Sbjct: 606 KPELILVSCGFGAALGDPEGGMRLTPAMFAHMTRMLQGF--GPLCMIMEGGYCIPAVAES 663
Query: 328 VLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPA 387
V + LL D PV R+I R+K P++ + + +T +K
Sbjct: 664 VALILRALLND-PVP------------RMINN-RRKSRNVDPSVLESIANVITVMKPYWT 709
Query: 388 HMISSSDSEDEDTKVETL 405
+ ED ++V+ L
Sbjct: 710 CLRYCKSVEDVKSRVQYL 727
>gi|354494990|ref|XP_003509615.1| PREDICTED: histone deacetylase 10-like [Cricetulus griseus]
Length = 678
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 223/395 (56%), Gaps = 12/395 (3%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A + L+ G+ QRC+ L+A EA ++ L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEQRCLCLSACEASEEELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ ++ L++ + + ++ ++ + +++Y + + A LA G+ +++ + V G ++
Sbjct: 65 SPEYIALVQRTQTLAKEELQE-MSKQFDAVYFHPSTFHCARLAVGAALQLVDAVLTGAVH 123
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWD+HHG Q
Sbjct: 124 NGLALVRPPGHHSQKAAANGFCVFNNVAIAAK---HAKQKYGLQRILIVDWDIHHGQGIQ 180
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G+G G G+ +N+PW G+ADYLA
Sbjct: 181 YIFDDDPSVLYFSWHRYEHGRFWPFLQESDACAVGQGQGQGFTVNLPWNQVGMGNADYLA 240
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ +++ L A G+I
Sbjct: 241 AFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLIQLLQVLAGGRICAV 300
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGY+L S++ SV + LL D P +S IQ+V+ + W +L
Sbjct: 301 LEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQSALESIQSVQTAQAPHWTSLQQN 360
Query: 375 LPTKLTSLKAPPAHMIS--SSDSEDEDTKVETLEA 407
+ L+ P H+ S E T E EA
Sbjct: 361 VAPVLS----PSTHLPEGRSLSLLAESTTCEVAEA 391
>gi|39795662|gb|AAH64018.1| Histone deacetylase 10 [Mus musculus]
Length = 666
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 223/394 (56%), Gaps = 19/394 (4%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A + L+ G+ +RC+ L+A EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEERCLCLSACEASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASK-LNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VH+ ++ L++ ++ D SK +++Y + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYIALVQK--TQTLDKEELHALSKQYDAVYFHPDTFHCARLAAGAALQLVDAVLTG 120
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+++ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 121 AVHNGLALVRPPGHHSQRAAANGFCVFNNVALAAK---HAKQKYGLQRILIVDWDVHHGQ 177
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
Q +F DP VL+FS HR+E G+F+P + +G+G G G+ +N+PW G+AD
Sbjct: 178 GIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQVGMGNAD 237
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G+I
Sbjct: 238 YLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRI 297
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D P +S IQ+V+ + +W
Sbjct: 298 CAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQSALESIQSVQTAQTPYW--- 354
Query: 372 ADELPTKLTSLKAPPAHMISSSDSEDEDTKVETL 405
TSL+ A ++SSS E+ + L
Sbjct: 355 --------TSLQQNVAPVLSSSTHSPEERSLRLL 380
>gi|322790340|gb|EFZ15318.1| hypothetical protein SINV_11382 [Solenopsis invicta]
Length = 306
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 169/235 (71%), Gaps = 10/235 (4%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
++ AA +A G V+++A + A G++ + FA+VRPPGHHAE ++AMGFC +N+VA+AA L
Sbjct: 47 TAPAARMAVGCVVDLAFKTALGDIKNGFAVVRPPGHHAETNQAMGFCFFNSVAIAARLL- 105
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + KILI+DWDVHHGN TQ+MF+ DPRVL+ S+HRH+ G F+P G T G
Sbjct: 106 --QQKLDVRKILILDWDVHHGNGTQQMFYDDPRVLYLSIHRHDDGNFFPGT--GGSTECG 161
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G GLGYN+NV W G GDA+YLA + I++P+AK+F PDI+I+SAGFDAA G
Sbjct: 162 AGEGLGYNVNVAWSGGLNPPMGDAEYLAAFRTIVMPIAKEFDPDIVIVSAGFDAAVGHPA 221
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
PLGG +V+P + M ++L++ A GK+VLALEGGY+L +I +S C+ LL D+
Sbjct: 222 PLGGYKVSPACFGKMTQQLLNLADGKVVLALEGGYDLAAICDSAQECVRALLGDE 276
>gi|351700570|gb|EHB03489.1| Histone deacetylase 10 [Heterocephalus glaber]
Length = 724
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 207/358 (57%), Gaps = 13/358 (3%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
LL+D CK E P R+ A L+ G+ QRC+ L A+EA + L VH+
Sbjct: 16 LLWDNSECKI---------ECPERLAAALGSLRQCGLEQRCLHLAAREATEAELGLVHSP 66
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
+V L++ + + + ++ + +++Y + + A LA G+V+++ + V G N+
Sbjct: 67 EYVALVRRTQTLGTEELQA-LSGQFDAVYFHPSTFHCARLAVGAVLQLVDAVLTGGSNNG 125
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
A+VRPPGHH++ A GFC++NNVA+AA + + + G++++LIVDWD+HHG Q +
Sbjct: 126 LALVRPPGHHSQRAAANGFCVFNNVAIAAE---HAKRKHGLHRVLIVDWDIHHGQGIQYI 182
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
F DP VL+FS HR+E G F+P + +G+G G G+ +N+PW G+ADYLA +
Sbjct: 183 FEDDPSVLYFSWHRYEHGRFWPFLPESDADTVGQGQGRGFTVNLPWNQVGMGNADYLAAF 242
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALE 316
H+LLP+A +F P++++ISAGFD+A GDP G + TP ++ + + L A G++ LE
Sbjct: 243 LHVLLPLAFEFDPELVLISAGFDSATGDPEGQMQATPECFAHLTQLLQVLAGGRVCAVLE 302
Query: 317 GGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
GGY+L S++ SV + LL D P +S IQ VR + W +L +
Sbjct: 303 GGYHLESLAQSVCMTVRSLLGDPVPVLLGPMAPCQSALESIQNVRAAQAPHWKSLQQQ 360
>gi|115495875|ref|NP_001068928.1| histone deacetylase 10 [Bos taurus]
gi|111306943|gb|AAI19836.1| Histone deacetylase 10 [Bos taurus]
gi|296486855|tpg|DAA28968.1| TPA: histone deacetylase 10 [Bos taurus]
Length = 670
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 207/359 (57%), Gaps = 15/359 (4%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
LL+D+ C+ E P R+ +LQ G+ QRC+ L A+EA + L VH+
Sbjct: 16 LLWDDPECEI---------ECPERLTTALERLQQHGLKQRCLQLVAREASEAELGLVHSP 66
Query: 77 NHVNLIKNISSKQFDSRRDRIASK-LNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+V L++ ++ +R + SK +++YL+ + A LA G+ +++ + V G + +
Sbjct: 67 EYVALLQG--TQALGTRELQALSKEYDAVYLHPSTFHCARLAVGAALQLVDAVLTGAVRN 124
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG Q
Sbjct: 125 GLALVRPPGHHSQRATANGFCVFNNVAIAAK---HAQQKHGLRRILIVDWDVHHGQGIQY 181
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 182 IFEDDPSVLYFSWHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQVGMGNADYVAA 241
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLAL 315
+ H+LLP+A +F P+++++SAGFD+A GDP G TP ++ + L A G++ L
Sbjct: 242 FLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMLATPECFAHLTHLLQVLAGGRVCAVL 301
Query: 316 EGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
EGGY+L S+S SV + LL D + S P S +Q VR + W +L +
Sbjct: 302 EGGYHLESLSQSVCMMVRALLGDPALPLSGPMEPHGSALESLQCVRAAQAPHWVSLQQQ 360
>gi|351707815|gb|EHB10734.1| Histone deacetylase 5 [Heterocephalus glaber]
Length = 1599
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/358 (39%), Positives = 215/358 (60%), Gaps = 41/358 (11%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVV------------L 60
G++YD M KH G+ HPE+ RI++IW++LQ G+ RC V +
Sbjct: 1149 TGVVYDTFMLKHQCVCGNTHVHPEHAGRIQSIWSRLQETGLLGRCEVQSPTQPLTTPQRV 1208
Query: 61 NAKEAKDKNLLSVHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG------- 109
++A + +VH+E H L ++ ++ DS++ I+ K+ ++ G
Sbjct: 1209 RGRKATLDEIQTVHSEFHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDT 1268
Query: 110 ------SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAV 163
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+
Sbjct: 1269 VWNEMHSSSAVRMAVGCLLELAFKVAVGELKNGFAIIRPPGHHAEQSTAMGFCFFNSVAI 1328
Query: 164 AASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDG 223
A L +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G
Sbjct: 1329 TAKLLQQ---KLNVGKVLIVDWDIHHGNGTQQAFYSDPSVLYISLHRYDHGNFFPGS--G 1383
Query: 224 FYTMIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDA 280
+G GPG+GYN+NV W G GD +YL + +++P+A++F PD++++SAGFDA
Sbjct: 1384 APEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFAPDVVLVSAGFDA 1443
Query: 281 AAG--DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
G PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 1444 VEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 1501
>gi|268551831|ref|XP_002633897.1| Hypothetical protein CBG19959 [Caenorhabditis briggsae]
Length = 935
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 203/366 (55%), Gaps = 9/366 (2%)
Query: 19 YDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA-KEAKDKNLLSVHTEN 77
++E +H HPE+P+RI+ I L+ + ++C VL + E D +L H +
Sbjct: 7 FNESQDEHKNTVCPTHPESPDRIQKIKEALKQTKVLEKCHVLTSFLEIDDADLELTHEKE 66
Query: 78 HVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAF 137
L+ S K+ + +S+++ E S + A V ++ R+ E ++ F
Sbjct: 67 VKELVA--SEKKTQEEINSQCENYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASNGF 124
Query: 138 AIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMF 197
A++RPPGHHA+ GFCL+NNVA AA E G +ILIVD DVHHG TQ++F
Sbjct: 125 AVIRPPGHHADSASPCGFCLFNNVAQAAE----EAFFSGAERILIVDLDVHHGQGTQRIF 180
Query: 198 WKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWD 257
++D RV +FS+HRHE G F+P + + IG G G+GYN NVP C D+DYL++
Sbjct: 181 YEDKRVFYFSIHRHEHGLFWPHLPESDFDHIGAGLGVGYNANVPLNETGCTDSDYLSILF 240
Query: 258 HILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEG 317
H+L+P+A F P +IISAGFD+ GDP+GG ++TP GYS L L AQG++++ LEG
Sbjct: 241 HVLMPLATQFDPHFVIISAGFDSLRGDPIGGMQLTPDGYSHFLYHLKSLAQGRMLVVLEG 300
Query: 318 GYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPT 377
GYN + + C+ VLL P + P EST + L +W D P+
Sbjct: 301 GYNHQMSAVAAQKCVRVLLGHAPFPAQVKDPPKESTVTSCVNLVTCLRNYWNCF-DYFPS 359
Query: 378 KLTSLK 383
+ TSL+
Sbjct: 360 R-TSLR 364
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 186/308 (60%), Gaps = 8/308 (2%)
Query: 32 DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE-AKDKNLLSVHTENHVNLIKNISSKQF 90
D HPE P R + I LQ +G+ +C+ N + A D + VHT+ ++ +K + +
Sbjct: 431 DNHPEKPARTRRILKTLQESGVLDKCIERNTERIATDDEIRMVHTKKMLDHLKQTETMKD 490
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE---GELNSAFAIVRPPGHHA 147
+ + ++ NSIYL S + A A G+ ++ + + + G+ N A IVRPPGHHA
Sbjct: 491 EELMEEAENEFNSIYLTRDSLKVARKAVGACLQSIDEIYKKPAGQRN-ALVIVRPPGHHA 549
Query: 148 EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFS 207
++ GFC++NNVAVAA + ++LI+DWDVHHGN TQ++F++DP V++ S
Sbjct: 550 SASKSSGFCIFNNVAVAAKYAQRHH---RAKRVLILDWDVHHGNGTQEIFYEDPSVMYMS 606
Query: 208 VHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDF 267
+HRH+ G FYP + Y +GE G G ++NVP+ GD +Y + +++P+A F
Sbjct: 607 IHRHDKGNFYPIGEPKDYFDVGESAGEGTSVNVPFSGAPMGDLEYQMAFQRVIMPIAYQF 666
Query: 268 GPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNS 327
PD++IISAGFDAA DPLG +VTP ++ M +L A G+I+ LEGGYNL SISNS
Sbjct: 667 NPDLVIISAGFDAAIDDPLGEYKVTPETFAWMTYQLSSLAAGRIITVLEGGYNLTSISNS 726
Query: 328 VLACMNVL 335
LA VL
Sbjct: 727 ALAVCEVL 734
>gi|270015074|gb|EFA11522.1| hypothetical protein TcasGA2_TC014236 [Tribolium castaneum]
Length = 839
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 201/344 (58%), Gaps = 23/344 (6%)
Query: 15 VGLLYDERMCKHNTPDGDY-HPENPNRIKAIWNKLQAAGI---PQRCVVLNAKEAKDKNL 70
V +YD++M +H GD PE P R+ +I LQ G+ QR ++ +D
Sbjct: 485 VNYIYDDQMLQHTPQSGDLERPERPERLTSIMKVLQEFGLLGRMQRTPIV----PRDFTE 540
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
S H ++ + + D +Y+NE + ++ LA ++ + + V
Sbjct: 541 YSPHARGYLGTVNEAMEQSKD------------VYVNEHTHDSVVLAVSGLLSLVDGVMS 588
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + A++RPPGHHAE D+AMG+C NN+AVAA++LL++ + ++LIVD+D+HHG
Sbjct: 589 GTSQAGVAVIRPPGHHAEHDKAMGYCFVNNIAVAANYLLDKYE---VERVLIVDFDIHHG 645
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ MF+++ RV++ S+H+ E G F+PAN YT G G G G+N+N+P+ N + GD+
Sbjct: 646 NGTQNMFYENDRVMYVSIHKDEHGKFFPANSPRNYTFDGYGRGRGFNVNIPFNNDKMGDS 705
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
+YLAV+ +++LPVA FGP ++++S GFDA DPLGG V+P + + L A+G+
Sbjct: 706 EYLAVFHNVILPVAYSFGPQVVLVSGGFDAGIHDPLGGYVVSPETFGHFIHMLKGLAKGR 765
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTW 354
++LALEGGYNL + S + C LL D + ++ F+ +
Sbjct: 766 LILALEGGYNLTTTSYAFAICAKALLGDPIIMPKNKIKGFKEKY 809
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 198/347 (57%), Gaps = 26/347 (7%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKD--KN 69
+ + G++YD + KH + +PENP R+++I K G+ +RCV L + D +
Sbjct: 45 RGKTGIVYDREVLKHKCDWDENYPENPQRLESILEKCTGQGLFERCVTLPNYKRSDLYEK 104
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+++ H + ++ +S +R AS ++IY N+ + +AA + SV+ + VA
Sbjct: 105 VIAKHNPDLFAKLERVSKMDLKAREQE-ASSYDAIYFNQSTFDAACRSLSSVLNLVTAVA 163
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
+ ++ + A+VRPPGHHA +E G+C +NNVA+AA +L E +++IVD+DVHH
Sbjct: 164 KRDVQNGMALVRPPGHHAMENEYNGYCYFNNVAIAAESVLREGHS---KRVMIVDFDVHH 220
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
G TQ+MF++ VL+FS+HR+E GTF+P + + IG G GLG+N+NVP GD
Sbjct: 221 GQGTQRMFYERNDVLYFSIHRYEHGTFWPNLLESNFNYIGRGDGLGFNVNVPLNETMLGD 280
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAA--------------------AGDPLGGC 289
DYLA+ ++LLP+ +F PD+I+ISAG+DAA GD G
Sbjct: 281 DDYLAIVFNLLLPLGFEFNPDLIVISAGYDAAIGCPEFNPDLVIVSAGFDSCMGDEKGRM 340
Query: 290 RVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VTP YS ++ L A+G+I + LEGGY L S+S +N LL
Sbjct: 341 NVTPGFYSHLISLLSTLARGQIAVVLEGGYFLPSLSEGACMTLNSLL 387
>gi|326668764|ref|XP_001332137.3| PREDICTED: histone deacetylase 4-like [Danio rerio]
Length = 650
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 133/333 (39%), Positives = 208/333 (62%), Gaps = 21/333 (6%)
Query: 15 VGLLYDERMCKH--NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+Y+ M KH + D +R+ +IW++LQ G+ +C +L + A + LLS
Sbjct: 258 TGLVYE--MMKHRCDCRDSSCGLHEADRVTSIWSRLQECGLRSQCKLLKGRSATVEELLS 315
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+E V + + S+ D + +++ N +SEA +A GSV E+A VA G+
Sbjct: 316 VHSEELVCFF--TGPEPYRSQMD-----IGTMWKNPRNSEALKMAVGSVTELALCVARGD 368
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
L + FA+V PPGHHA + + ++N+VA+AA L + +L + KILIVDWDVHHG+
Sbjct: 369 LRNGFAVVTPPGHHASRSQTLDSIVFNSVAIAAKQL---QEQLKVKKILIVDWDVHHGSG 425
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR---CGD 249
T+ +F+ DP VL+ S+HR++ G F+ N G + +G G GYN+NV W G GD
Sbjct: 426 TESIFYTDPSVLYISLHRYDDGAFF--NGTGDPSRVGCDVGRGYNVNVAWSGGLRPPMGD 483
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSVMLKKLMDFA 307
A+YLA + +++P+A +F P+++++SAGFDAA G P LGG RV+P + + +KLM+ A
Sbjct: 484 AEYLAAFRTVVMPIAHEFSPNVVLVSAGFDAAEGHPAALGGYRVSPKCFGWLTQKLMELA 543
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
+G++VL LEGGY L S+ ++ AC++ LL ++P
Sbjct: 544 EGRVVLVLEGGYELVSLCDASQACVSALLGNEP 576
>gi|440899055|gb|ELR50426.1| Histone deacetylase 10, partial [Bos grunniens mutus]
Length = 667
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 206/359 (57%), Gaps = 15/359 (4%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
LL+D+ C+ E P R+ +LQ G+ QRC+ L A+EA + L VH+
Sbjct: 16 LLWDDPECEI---------ECPERLTTALERLQQHGLKQRCLQLVAREASEAELGLVHSP 66
Query: 77 NHVNLIKNISSKQFDSRRDRIASK-LNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
++ L++ ++ +R + SK +++YL+ + A LA G+ +++ + V G + +
Sbjct: 67 EYIALLRG--TQALGTRELQALSKEYDAVYLHPSTFHCARLAVGAALQLVDAVLTGAVRN 124
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
A+VRPPGHH++ A GFCL+NNVAVAA + + + G+ +ILIVDWDVHHG Q
Sbjct: 125 GLALVRPPGHHSQRATANGFCLFNNVAVAAK---HAQQKHGLRRILIVDWDVHHGQGIQY 181
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 182 IFEDDPSVLYFSWHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQVGMGNADYVAA 241
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLAL 315
+ H+LLP+A +F P+++++SAGFD+A GDP G TP ++ + L A G + L
Sbjct: 242 FLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMLATPECFAHLTHLLQVLAGGWVCAVL 301
Query: 316 EGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
EGGY+L S+S SV + LL D + S P S +Q VR + W +L +
Sbjct: 302 EGGYHLESLSQSVCMMVRALLGDPALPLSGPMEPHGSALESLQCVRAAQAPHWVSLQQQ 360
>gi|17540334|ref|NP_500788.1| Protein HDA-6, isoform a [Caenorhabditis elegans]
gi|351063051|emb|CCD71098.1| Protein HDA-6, isoform a [Caenorhabditis elegans]
Length = 863
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 211/383 (55%), Gaps = 15/383 (3%)
Query: 7 EGRTIKRRVG---LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL-NA 62
E R R G + +++ +H HPE+ +RI I L I ++C VL N
Sbjct: 4 EDRQKNRSTGPTLIGFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCTVLTNF 63
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRD--RIASKLNSIYLNEGSSEAAYLAAGS 120
E D +L H ++ ++K++ + ++ D K +S+++ E S + A
Sbjct: 64 LEIDDADLEVTHDKS---MVKDLMESEKKTQEDINSQCEKYDSVFMTENSMKVAKDGVAC 120
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
V ++ R+ E ++ FA+VRPPGHHA+ GFCL+NNVA AA E G +I
Sbjct: 121 VRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAE----EAFFSGAERI 176
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
LIVD DVHHG+ TQ++F+ D RVL+FS+HRHE G F+P + + IG G GLGYN N+
Sbjct: 177 LIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANL 236
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
C D+DYL++ H+LLP+A F P +IISAGFDA GDPLGG +TP GYS +L
Sbjct: 237 ALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHIL 296
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAV 360
L AQG++++ LEGGYN + +V C+ VLL P + P EST ++
Sbjct: 297 YHLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSIELNEAPKESTVDSCVSL 356
Query: 361 RKKLSAFWPTLADELPTKLTSLK 383
L W D P++ TSL+
Sbjct: 357 VSVLRHHWNCF-DYFPSR-TSLR 377
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 212/368 (57%), Gaps = 24/368 (6%)
Query: 32 DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE-AKDKNLLSVHTENHVNLIKNISSKQF 90
D HPE P R + I L+ +G+ ++CV N + A ++ + VHT+ + ++ + +
Sbjct: 444 DNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKKMLEHLRTTETMKD 503
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE---GELNSAFAIVRPPGHHA 147
+ + + NSIYL + + A A G+V++ + + E G+ N A IVRPPGHHA
Sbjct: 504 EELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRN-ALVIVRPPGHHA 562
Query: 148 EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFS 207
++ GFC++NNVAVAA + ++LI+DWDVHHGN TQ++F++D V++ S
Sbjct: 563 SASKSSGFCIFNNVAVAAKYAQRRHKA---KRVLILDWDVHHGNGTQEIFYEDSNVMYMS 619
Query: 208 VHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDF 267
+HRH+ G FYP + Y+ +GEG G G ++NVP+ + GD +Y + +++P+A F
Sbjct: 620 IHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAYQF 679
Query: 268 GPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNS 327
PD+++ISAGFDAA DPLG +VTP +++M +L A G+I+ LEGGYNL SISNS
Sbjct: 680 NPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSISNS 739
Query: 328 VLACMNVL--------LEDKPVAGSSEAYPFES----TWRVIQAVRKK----LSAFWPTL 371
A VL L ++ +++ ES T R + AV++K L F +
Sbjct: 740 AQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCAVQQKYWSILKGFQIII 799
Query: 372 ADELPTKL 379
L +KL
Sbjct: 800 GSVLNSKL 807
>gi|17540332|ref|NP_500787.1| Protein HDA-6, isoform b [Caenorhabditis elegans]
gi|30923304|sp|Q20296.2|HDA6_CAEEL RecName: Full=Histone deacetylase 6
gi|351063052|emb|CCD71099.1| Protein HDA-6, isoform b [Caenorhabditis elegans]
Length = 955
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 211/383 (55%), Gaps = 15/383 (3%)
Query: 7 EGRTIKRRVG---LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL-NA 62
E R R G + +++ +H HPE+ +RI I L I ++C VL N
Sbjct: 4 EDRQKNRSTGPTLIGFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCTVLTNF 63
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRD--RIASKLNSIYLNEGSSEAAYLAAGS 120
E D +L H ++ ++K++ + ++ D K +S+++ E S + A
Sbjct: 64 LEIDDADLEVTHDKS---MVKDLMESEKKTQEDINSQCEKYDSVFMTENSMKVAKDGVAC 120
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
V ++ R+ E ++ FA+VRPPGHHA+ GFCL+NNVA AA E G +I
Sbjct: 121 VRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAE----EAFFSGAERI 176
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
LIVD DVHHG+ TQ++F+ D RVL+FS+HRHE G F+P + + IG G GLGYN N+
Sbjct: 177 LIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANL 236
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
C D+DYL++ H+LLP+A F P +IISAGFDA GDPLGG +TP GYS +L
Sbjct: 237 ALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHIL 296
Query: 301 KKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAV 360
L AQG++++ LEGGYN + +V C+ VLL P + P EST ++
Sbjct: 297 YHLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSIELNEAPKESTVDSCVSL 356
Query: 361 RKKLSAFWPTLADELPTKLTSLK 383
L W D P++ TSL+
Sbjct: 357 VSVLRHHWNCF-DYFPSR-TSLR 377
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 208/356 (58%), Gaps = 23/356 (6%)
Query: 32 DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE-AKDKNLLSVHTENHVNLIKNISSKQF 90
D HPE P R + I L+ +G+ ++CV N + A ++ + VHT+ + ++ + +
Sbjct: 444 DNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKKMLEHLRTTETMKD 503
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE---GELNSAFAIVRPPGHHA 147
+ + + NSIYL + + A A G+V++ + + E G+ N A IVRPPGHHA
Sbjct: 504 EELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRN-ALVIVRPPGHHA 562
Query: 148 EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFS 207
++ GFC++NNVAVAA + ++LI+DWDVHHGN TQ++F++D V++ S
Sbjct: 563 SASKSSGFCIFNNVAVAAKYAQRRHKA---KRVLILDWDVHHGNGTQEIFYEDSNVMYMS 619
Query: 208 VHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDF 267
+HRH+ G FYP + Y+ +GEG G G ++NVP+ + GD +Y + +++P+A F
Sbjct: 620 IHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAYQF 679
Query: 268 GPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNS 327
PD+++ISAGFDAA DPLG +VTP +++M +L A G+I+ LEGGYNL SISNS
Sbjct: 680 NPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSISNS 739
Query: 328 VLACMNVL--------LEDKPVAGSSEAYPFES----TWRVIQAVRKKLSAFWPTL 371
A VL L ++ +++ ES T R + AV++K +W L
Sbjct: 740 AQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCAVQQK---YWSIL 792
>gi|444707857|gb|ELW49014.1| Plexin-B2 [Tupaia chinensis]
Length = 5137
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 210/366 (57%), Gaps = 8/366 (2%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A + L+ G+ QRC L+ +EA + L
Sbjct: 2703 TALVYHEDMTAPRLLWDDPECQIECPERLTAALDLLRQCGLEQRCTRLSTREASEAELGL 2762
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V L++ + ++ ++ + +++Y + + A LAAG+ +++ + V G
Sbjct: 2763 VHSLEYVALVRGTQALG-EAELQALSGQYDAVYFHPSTYHCARLAAGAALQLVDAVLAGT 2821
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA + + + G+++ILIVDWD+HHG
Sbjct: 2822 VRNGLALVRPPGHHSQRAAASGFCVFNNVAIAAQ---HAKQKHGLHRILIVDWDIHHGQG 2878
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + ++G G G G+ +N+PW G+A+Y
Sbjct: 2879 IQYIFEDDPSVLYFSWHRYEHGRFWPFLRESDADVVGRGQGRGFTVNLPWNQVGMGNAEY 2938
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
LA + H+LLP+A +FGP++++++AGFD+A GDP G + TP ++ + L A G++
Sbjct: 2939 LAAFLHVLLPLAFEFGPELVLVAAGFDSAIGDPEGQMQATPECFAHLTHLLQVLAGGRVC 2998
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGY+L S++ SV + LL D P +S IQ VR + W +L
Sbjct: 2999 AVLEGGYHLESLAQSVCMTVQALLGDPAPPLLRPMVPCQSALVSIQRVRAAQAPHWTSLQ 3058
Query: 373 --DELP 376
DE P
Sbjct: 3059 ENDERP 3064
>gi|119593921|gb|EAW73515.1| histone deacetylase 10, isoform CRA_e [Homo sapiens]
Length = 673
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 212/366 (57%), Gaps = 10/366 (2%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRE-TQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH + A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFE----STWRVIQAVRKKLSAFW 368
LEGGY+L S++ SV + LL D S P + S IQ+ R + W
Sbjct: 299 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQRCEGSALESIQSARAAQAPHW 358
Query: 369 PTLADE 374
+L +
Sbjct: 359 KSLQQQ 364
>gi|170052439|ref|XP_001862222.1| histone deacetylase [Culex quinquefasciatus]
gi|167873377|gb|EDS36760.1| histone deacetylase [Culex quinquefasciatus]
Length = 1031
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/410 (36%), Positives = 231/410 (56%), Gaps = 29/410 (7%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL +D M KH GD HPE+ R++++W +L G+ RC L +++A +
Sbjct: 597 KPTTGLAFDSLMLKHTCVCGDNAAHPEHSGRLQSVWARLVETGLASRCDKLRSRKATQEE 656
Query: 70 LLSVHTENHVNLI--KNISSKQFDSRR--------DRIASKLNSIYLNEGSSEAAYLAAG 119
L +VHTE H L ++ ++ D+ R + L++ + ++ AA +AAG
Sbjct: 657 LQTVHTEAHSLLFGTSQLNRQKVDASRVSFVRLACGGVGVDLDTTWNEHHTAAAARMAAG 716
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
VI++AE E+ + FA+V P G + G L +++A+AA L P + +
Sbjct: 717 CVIDLAE----AEIRNGFAVVVP-GSSRRTERRHGLLLLHSIAIAAKVLRQRLPS-DVQR 770
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
+LIVDWDVHHGN TQ++F+ DP VL+ S+HRH+ G F+P G T G GPGLG+N+N
Sbjct: 771 VLIVDWDVHHGNGTQQVFYDDPNVLYLSIHRHDDGNFFPGT--GGPTECGAGPGLGFNVN 828
Query: 240 VPWENGRC---GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPY 294
+ W G GDA+YLA + +++P+A++F PD++++SAGFDAA G PLGG V+P
Sbjct: 829 IAWSGGLSPPLGDAEYLAAFRTVVMPIAREFQPDLVLVSAGFDAAFGHPAPLGGYMVSPA 888
Query: 295 GYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED--KPVAGSSEAY-PFE 351
+ + ++LM A+GK+VLALEGGY+L +I +S C+ LL D P+A + + P +
Sbjct: 889 CFGYLTRELMKLAEGKVVLALEGGYDLPAICDSAQECVRALLGDDLSPIAATELSRPPCQ 948
Query: 352 STWRVIQAVRKKLSAFWPTLADELPT-KLTSLKAPPAHMISSSDSEDEDT 400
S +Q WP + T ++++A + S D E+ DT
Sbjct: 949 SAIETLQKTIAIQMTHWPCVKRLAHTVGFSAMQAVSGPLSGSGDREESDT 998
>gi|164614597|gb|ABY64525.1| histone deacetylase 2 splice variant A [Tetrahymena thermophila]
Length = 664
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 213/371 (57%), Gaps = 32/371 (8%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI---PQRCVVLNAKE 64
G I + G++YD KH + H E P R+++I+N L G+ P +V K
Sbjct: 15 GLNINGQTGVVYDLEQLKHKSVRQ--HVECPARLQSIFNHLTTQGLLKSPLVHIVDKLKP 72
Query: 65 AKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV 124
A+ + H +N++ I+ + ++ +++ I + Y N+ S +AAYL G VIE
Sbjct: 73 AEKSIVKYAHDDNYIEFIEGMWPEK--TKKKEIY--MLDTYFNQSSKDAAYLGVGGVIES 128
Query: 125 AERVAEGELNSAFAIVRPPGHHA-EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIV 183
+R+ + +AF I+RPPGHH+ E GFC +NNVA+AA +L + G+ K+LI
Sbjct: 129 VDRIISKQWKNAFCIIRPPGHHSGESKVCTGFCFFNNVAIAAKYL---QKNHGVKKVLIF 185
Query: 184 DWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE 243
DWD+HHG+ TQ +F DP VLF S+HRH+ G+FYP + G T G G G G+ IN+PW+
Sbjct: 186 DWDIHHGDGTQHIFQDDPNVLFVSMHRHDDGSFYPQS--GSVTNNGSGEGKGFKINIPWD 243
Query: 244 NG------RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
G G +Y+ ++ I P+ ++F P+ I+ISAGFD+A GDPLG C++T GY+
Sbjct: 244 IGYSQNALTAGTDEYIYAFERIAFPIIQEFQPEFILISAGFDSAEGDPLGQCKLTYEGYA 303
Query: 298 VMLKKLMDFAQGK-IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR- 355
+ ++LMD GK I++ LEGGYNL SIS + + + L + EA+P E R
Sbjct: 304 YLTRRLMDITNGKNILVVLEGGYNLESISWAAESVLRTL--------TGEAFPLEKGQRK 355
Query: 356 -VIQAVRKKLS 365
IQ ++ ++
Sbjct: 356 CSIQELKDRIQ 366
>gi|119593920|gb|EAW73514.1| histone deacetylase 10, isoform CRA_d [Homo sapiens]
Length = 662
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 213/364 (58%), Gaps = 10/364 (2%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G +
Sbjct: 65 SPEYVSLVRETQVLGKEELQA-LSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQ 123
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH + A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG Q
Sbjct: 124 NGLALVRPPGHHGQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQGIQ 180
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 181 YLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVA 240
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++
Sbjct: 241 AFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAV 300
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFE----STWRVIQAVRKKLSAFWPT 370
LEGGY+L S++ SV + LL D S P + S IQ+ R + W +
Sbjct: 301 LEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQRCEGSALESIQSARAAQAPHWKS 360
Query: 371 LADE 374
L +
Sbjct: 361 LQQQ 364
>gi|440640232|gb|ELR10151.1| hypothetical protein GMDG_04545 [Geomyces destructans 20631-21]
Length = 748
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 216/394 (54%), Gaps = 33/394 (8%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDY---HPENPNRIKAIWNKLQAAGI----PQRCVV- 59
GR G YD+RM H D HPE+P RI +I + A + P+ +
Sbjct: 72 GRKKYLPTGCCYDDRMKLHANADFSVDPPHPEDPRRISSIMRAFKEAKLVYTGPEENLAG 131
Query: 60 ------------LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRR---DRIASKLNSI 104
+ A+ A + +VHT H + ++S D R + + S+
Sbjct: 132 ILKNSPTAYMYRIAARGATPAEICTVHTPLHFKWVSDLSGMSSDELRAMSRALDTGRKSL 191
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y+ + EAA +AAG IE + V G + +A A++RPPGHHAE DEA+GFC++NNV VA
Sbjct: 192 YVGNYTYEAALIAAGGAIETCKNVVAGTVKNAIAVIRPPGHHAESDEALGFCMFNNVPVA 251
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA--ND- 221
A + P+ K+LI+DWDVHHGN Q +F+ DP VL+ S+H ++ G+FYP +D
Sbjct: 252 ARVCQADFPD-SCRKVLILDWDVHHGNGIQNIFYDDPNVLYISLHVYKDGSFYPGFPDDP 310
Query: 222 ---DGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
DG +G GPG G N+N+PW GD +YL + I++P+A++F PD++I++AGF
Sbjct: 311 SVPDGGLGNVGAGPGSGRNVNIPWHAQGMGDGEYLGAFQKIVMPIAQEFNPDLVIVAAGF 370
Query: 279 DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED 338
DAA GD LG C V+P Y+ M LM A GK+ + LEGGYNL +IS S LA L+ +
Sbjct: 371 DAADGDELGSCFVSPACYAHMTHMLMSLAGGKVAVCLEGGYNLKAISRSALAVAKTLMGE 430
Query: 339 KPVAGSSEAYPF-ESTWRVIQAVRKKLSAFWPTL 371
P E P + +++ V++ + FW +
Sbjct: 431 PP--ERIELPPINKEALKILHRVKEAHAPFWECM 462
>gi|431899553|gb|ELK07516.1| Histone deacetylase 10 [Pteropus alecto]
Length = 679
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 206/352 (58%), Gaps = 6/352 (1%)
Query: 36 ENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRD 95
E P R+ +L+ G+ QRC+ L A+EA + L VH+ +V L++ + + +
Sbjct: 16 ECPERLTTTLERLRQRGLEQRCLRLAAREASEAELGLVHSPEYVALLRETQALGTGALK- 74
Query: 96 RIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGF 155
++ + +++Y + + A LA G+ +++ + V G + + A+VRPPGHH++ A GF
Sbjct: 75 ALSGQYDAVYFHPSTFHCARLAVGAGLQLVDAVLTGTVRNGLALVRPPGHHSQRAAANGF 134
Query: 156 CLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGT 215
C++NNVA+AA + + + G+++ILIVDWD+HHG Q +F DP VL+FS HR+E G
Sbjct: 135 CVFNNVAIAAK---HAQQKHGLHRILIVDWDIHHGQGIQYIFEDDPSVLYFSWHRYEHGR 191
Query: 216 FYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIIS 275
+P + +G GPG G+ +N+PW G+ADY+A + H+LLP+A +F P+++++S
Sbjct: 192 CWPHLRESDADAVGRGPGRGFTVNLPWNQVGLGNADYVAAFLHVLLPLAFEFDPELVLVS 251
Query: 276 AGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
AGFD+A GDP G + TP ++ + + L A G++ LEGGY+L S+S SV + L
Sbjct: 252 AGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAMLEGGYHLESLSLSVCMMVQAL 311
Query: 336 LEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL--ADELPTKLTSLKAP 385
L D S P S IQ+VR + W +L D +P + S +P
Sbjct: 312 LGDPAPPLSGPMVPHHSALESIQSVRAAQAPHWTSLQQQDMMPIRSPSTYSP 363
>gi|193206283|ref|NP_001122780.1| Protein HDA-6, isoform c [Caenorhabditis elegans]
gi|351063059|emb|CCD71106.1| Protein HDA-6, isoform c [Caenorhabditis elegans]
Length = 957
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 208/356 (58%), Gaps = 23/356 (6%)
Query: 32 DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE-AKDKNLLSVHTENHVNLIKNISSKQF 90
D HPE P R + I L+ +G+ ++CV N + A ++ + VHT+ + ++ + +
Sbjct: 446 DNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKKMLEHLRTTETMKD 505
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE---GELNSAFAIVRPPGHHA 147
+ + + NSIYL + + A A G+V++ + + E G+ N A IVRPPGHHA
Sbjct: 506 EELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRN-ALVIVRPPGHHA 564
Query: 148 EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFS 207
++ GFC++NNVAVAA + ++LI+DWDVHHGN TQ++F++D V++ S
Sbjct: 565 SASKSSGFCIFNNVAVAAKYAQRRHKA---KRVLILDWDVHHGNGTQEIFYEDSNVMYMS 621
Query: 208 VHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDF 267
+HRH+ G FYP + Y+ +GEG G G ++NVP+ + GD +Y + +++P+A F
Sbjct: 622 IHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAYQF 681
Query: 268 GPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNS 327
PD+++ISAGFDAA DPLG +VTP +++M +L A G+I+ LEGGYNL SISNS
Sbjct: 682 NPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSISNS 741
Query: 328 VLACMNVL--------LEDKPVAGSSEAYPFES----TWRVIQAVRKKLSAFWPTL 371
A VL L ++ +++ ES T R + AV++K +W L
Sbjct: 742 AQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCAVQQK---YWSIL 794
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 211/385 (54%), Gaps = 17/385 (4%)
Query: 7 EGRTIKRRVG---LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL-NA 62
E R R G + +++ +H HPE+ +RI I L I ++C VL N
Sbjct: 4 EDRQKNRSTGPTLIGFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCTVLTNF 63
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRD--RIASKLNSIYLNE--GSSEAAYLAA 118
E D +L H ++ ++K++ + ++ D K +S+++ E S + A
Sbjct: 64 LEIDDADLEVTHDKS---MVKDLMESEKKTQEDINSQCEKYDSVFMTEFQNSMKVAKDGV 120
Query: 119 GSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN 178
V ++ R+ E ++ FA+VRPPGHHA+ GFCL+NNVA AA E G
Sbjct: 121 ACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAE----EAFFSGAE 176
Query: 179 KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNI 238
+ILIVD DVHHG+ TQ++F+ D RVL+FS+HRHE G F+P + + IG G GLGYN
Sbjct: 177 RILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNA 236
Query: 239 NVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSV 298
N+ C D+DYL++ H+LLP+A F P +IISAGFDA GDPLGG +TP GYS
Sbjct: 237 NLALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSH 296
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQ 358
+L L AQG++++ LEGGYN + +V C+ VLL P + P EST
Sbjct: 297 ILYHLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSIELNEAPKESTVDSCV 356
Query: 359 AVRKKLSAFWPTLADELPTKLTSLK 383
++ L W D P++ TSL+
Sbjct: 357 SLVSVLRHHWNCF-DYFPSR-TSLR 379
>gi|308273423|emb|CBX30025.1| hypothetical protein N47_D28340 [uncultured Desulfobacterium sp.]
Length = 360
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 223/372 (59%), Gaps = 38/372 (10%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ G++ D +H T D DYHPE+P+R++ I++ L+ + + V + +EA + L +
Sbjct: 12 KTGIIKDPLYLEH-TAD-DYHPESPHRLETIYSMLEEKDMAGKFVAIKPREATREELGYI 69
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT +++ + + + R ++ ++ Y + GS EAA LAAG V+E+ + + E ++
Sbjct: 70 HTAEYISRVASTKT------RSKVMLDPDT-YTSPGSWEAAILAAGGVLELIDNLMEKKI 122
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
++ FA +RPPGHHAE D AMGFCL+NN+A+ A + + + +++ILI+DWD+HHGN T
Sbjct: 123 DNGFAFLRPPGHHAEADRAMGFCLFNNIAIGAKYAIE---KYNLDRILIIDWDIHHGNGT 179
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q+ F+ DP+VL+FS H++ +YP G +GEG G G+ IN+P +G GD +Y
Sbjct: 180 QRSFYNDPQVLYFSTHQY---PYYPGT--GGVNELGEGKGKGFTINIPLSSG-VGDDEYA 233
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QG 309
++ IL PVA +F P +I++SAGFD DPLGG +TP G++ + K +++ A +G
Sbjct: 234 GIFMEILKPVAFEFKPQLILVSAGFDIYIDDPLGGMEITPEGFARLAKIILELADTICEG 293
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP----------FESTWRVIQA 359
K++ LEGGY+L + +SV A VLLE ++G S + + + I+
Sbjct: 294 KVLFILEGGYSLKGLHDSVKA---VLLE---LSGESALFKGRTLINENINTDGIFSKIEQ 347
Query: 360 VRKKLSAFWPTL 371
++ + +WP L
Sbjct: 348 IKTAIKPYWPGL 359
>gi|344244936|gb|EGW01040.1| Histone deacetylase 10 [Cricetulus griseus]
Length = 571
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/344 (36%), Positives = 205/344 (59%), Gaps = 8/344 (2%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A + L+ G+ QRC+ L+A EA ++ L VH
Sbjct: 14 LVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEQRCLCLSACEASEEELGLVH 73
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ ++ L++ + + ++ ++ + +++Y + + A LA G+ +++ + V G ++
Sbjct: 74 SPEYIALVQRTQTLAKEELQE-MSKQFDAVYFHPSTFHCARLAVGAALQLVDAVLTGAVH 132
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWD+HHG Q
Sbjct: 133 NGLALVRPPGHHSQKAAANGFCVFNNVAIAAK---HAKQKYGLQRILIVDWDIHHGQGIQ 189
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G+G G G+ +N+PW G+ADYLA
Sbjct: 190 YIFDDDPSVLYFSWHRYEHGRFWPFLQESDACAVGQGQGQGFTVNLPWNQVGMGNADYLA 249
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ +++ L A G+I
Sbjct: 250 AFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLIQLLQVLAGGRICAV 309
Query: 315 LEGGYNLGSISNSVLACMNVLLED--KPVAGSSEAYPFESTWRV 356
LEGGY+L S++ SV + LL D P+ G WRV
Sbjct: 310 LEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQRFEDWRV 353
>gi|311256822|ref|XP_003126824.1| PREDICTED: histone deacetylase 10-like [Sus scrofa]
Length = 671
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 214/373 (57%), Gaps = 8/373 (2%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ +L+ G+ QRC+ L A+EA + L VH
Sbjct: 5 LVYHEDMTAARLLWDDPECEIERPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V L++ + + + ++ + +++Y + + A LAAG+ +++ + V G +
Sbjct: 65 SPEYVALLRGTQALSTEELQA-LSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVR 123
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH++ A GFC++N+VA+AA + + + G+++ILIVDWD+HHG TQ
Sbjct: 124 NGLALVRPPGHHSQRAAANGFCVFNSVAIAAK---HAQQKHGLHRILIVDWDIHHGQGTQ 180
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 181 YIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMA 240
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ +LLP+A +F +++++SAGFD+A GD G + TP ++ + + L A G++
Sbjct: 241 AFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAV 300
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
LEGGY+L S+S SV + LL D S P S + IQ+VR + W +L +
Sbjct: 301 LEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQAPHWMSLRQQ 360
Query: 375 --LPTKLTSLKAP 385
P +S ++P
Sbjct: 361 GVAPVLSSSTRSP 373
>gi|380791967|gb|AFE67859.1| histone deacetylase 10 isoform 1, partial [Macaca mulatta]
Length = 335
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 203/331 (61%), Gaps = 8/331 (2%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA + L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASKEELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G +
Sbjct: 65 SPEYVSLVRK-TQVLGEEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQ 123
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++ILIVDWDVHHG Q
Sbjct: 124 NGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILIVDWDVHHGQGIQ 180
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 181 YLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVA 240
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + L A G++
Sbjct: 241 AFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTHLLQVLAGGRVCAM 300
Query: 315 LEGGYNLGSISNSVLACMNVLLED--KPVAG 343
LEGGY+L S++ SV + LL D P++G
Sbjct: 301 LEGGYHLESLAESVCMTVQALLGDPAPPLSG 331
>gi|427702267|ref|YP_007045489.1| deacetylase [Cyanobium gracile PCC 6307]
gi|427345435|gb|AFY28148.1| deacetylase, histone deacetylase/acetoin utilization protein
[Cyanobium gracile PCC 6307]
Length = 321
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 185/312 (59%), Gaps = 19/312 (6%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
G +HPE P R+ A+ L+ AG+ RC +L + A D LL HT ++ ++ +
Sbjct: 21 GPWHPECPARVDAVIQGLERAGLLARCRILPPRLATDAELLRCHTPGYLQQVR----EDI 76
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD 150
+ RD++++ +I + S A LAAG V+ E V E ++ A+A+VRPPGHHA P
Sbjct: 77 QAGRDQLSTGDTAI--SPHSERTARLAAGGVLAAVEAVMEQRVHRAYAVVRPPGHHASPA 134
Query: 151 EAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHR 210
MGFC+YNNVAVAA L G+ +IL+VDWDVHHGN TQ +FW DP VLF S H+
Sbjct: 135 RGMGFCIYNNVAVAARHLQAVH---GLERILVVDWDVHHGNGTQDIFWSDPSVLFLSSHQ 191
Query: 211 HEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPD 270
YP + G GEGPG GY N P G G + +A W LLP+A+DF PD
Sbjct: 192 ---APLYPGS--GSRQEQGEGPGSGYTRNCPLPAGTSG-PEMVAAWREELLPLAEDFAPD 245
Query: 271 IIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM----DFAQGKIVLALEGGYNLGSISN 326
++ISAGFD+ AGDPLG R+ ++ + + L+ D AQG++V ALEGGY+L +++
Sbjct: 246 FVLISAGFDSRAGDPLGDLRLQDRDFAALTRMLLSIAADHAQGRLVSALEGGYDLEGLAS 305
Query: 327 SVLACMNVLLED 338
+ A + LL D
Sbjct: 306 ASAAHVACLLGD 317
>gi|337287997|ref|YP_004627469.1| histone deacetylase superfamily [Thermodesulfobacterium sp. OPB45]
gi|334901735|gb|AEH22541.1| histone deacetylase superfamily [Thermodesulfobacterium geofontis
OPF15]
Length = 350
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 187/321 (58%), Gaps = 23/321 (7%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
++ ++YDE KHN G +HPE+P R++AIW +LQ I V A + +L
Sbjct: 2 KKFAIIYDEIFLKHNP--GAFHPESPQRLQAIWERLQKEDIAPYIEVFPPDIATKEEILW 59
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
H+E NLI++ K + A+ NE S AA A G+ + + E
Sbjct: 60 NHSEYLYNLIEHTKGKPYTQLDPDTAT-------NEYSFFAALKAVGAQKTALKLLFEEG 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
FA+VRPPGHHAE D AMGFCL+NNVA+AA + N G+ KILIVDWD+HHGN
Sbjct: 113 YRGTFALVRPPGHHAEKDRAMGFCLFNNVAIAAYYAKNYY---GLKKILIVDWDLHHGNG 169
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQK F+ DP VL+FSVH++ +YP G Y+ IGEG G+G+ +NVP CGD +Y
Sbjct: 170 TQKSFYSDPEVLYFSVHQY---PYYPGT--GHYSEIGEGKGIGFTLNVPLP-AYCGDEEY 223
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTP-YGYSVMLKKLMDFA---- 307
+ ++ L P+A F P+II++SAGFD GDPLG VTP +G ++ L + A
Sbjct: 224 IYIFKEFLGPIALQFEPEIIMVSAGFDLCEGDPLGNMEVTPHFGIPMLTLILKNIAEKTC 283
Query: 308 QGKIVLALEGGYNLGSISNSV 328
QG+I+ LEGGYN ++ SV
Sbjct: 284 QGRILFTLEGGYNAVNLQESV 304
>gi|384485860|gb|EIE78040.1| hypothetical protein RO3G_02744 [Rhizopus delemar RA 99-880]
Length = 542
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 187/337 (55%), Gaps = 50/337 (14%)
Query: 12 KRRV---GLLYDERMCKHNTPDG-DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKD 67
KRR+ G +YD M H TPD + HPE+P RI I++ L+ G+ CV + ++ A
Sbjct: 238 KRRLLMTGFVYDTIMSYHATPDPIEIHPEDPRRIYKIFSILEKHGLLAECVRIKSRRATR 297
Query: 68 KNLLSVHTENHVNLIKNISSKQFDSRRDRIASK--LNSIYLNEGSSEAAYLAAGSVIEVA 125
+ + ++H+ H ++ + +F+ R I + +SIYLN S E+ AAGS+I +
Sbjct: 298 EEITAIHSIIHYRKMRETT--KFNKRSQYIDLEHIYDSIYLNSSSFESGLYAAGSLIALL 355
Query: 126 ERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDW 185
E + + E+ +AFAI+RPPGHHAE D MGFCL+NNVA+A + +N +L + K LIVDW
Sbjct: 356 EALVKDEIRNAFAIIRPPGHHAEHDAPMGFCLFNNVAIATHYCMN---KLSVKKTLIVDW 412
Query: 186 DVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245
DVH GN TQ +F +P VL+ S+HR+E TFYPA+ G G G G
Sbjct: 413 DVHFGNGTQNIFSDNPNVLYISLHRYEDRTFYPADRKGSAEYTGHGKGR----------- 461
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
+SAGFDAA DP+G C+VTP GY+ M L
Sbjct: 462 ----------------------------VSAGFDAAIDDPIGQCKVTPAGYAHMTHMLKS 493
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVA 342
GK+ +ALEGGYNL S + S L C+NVLL D P A
Sbjct: 494 INNGKMAIALEGGYNLNSTALSALGCLNVLLGDSPPA 530
>gi|358335751|dbj|GAA54377.1| histone deacetylase 4/5 [Clonorchis sinensis]
Length = 1215
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 202/372 (54%), Gaps = 61/372 (16%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
+G+L C++++ HPENP R+ +IW LQA+G+ RC + A + L H
Sbjct: 707 IGMLNHHCTCQNDS----KHPENPRRLTSIWKHLQASGLASRCHHQPGRRATLRELQWAH 762
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKL------------------NSIYLNEG-SSEAAY 115
+ I I + R RIA L ++ + G ++ AA
Sbjct: 763 HD-----IYTILFGSDPANRCRIAPSLLATVRLCRLDCGGVGVDSDTTWNTAGQTAHAAR 817
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP-- 173
LAAG VI++A RV G+ + FA+VRPPGHHAEP +AMGFC +N+VA+AA P
Sbjct: 818 LAAGCVIDLACRVLAGQCPNGFALVRPPGHHAEPGQAMGFCYFNSVAIAARQAQYFHPSP 877
Query: 174 ---------ELGIN---------------KILIVDWDVHHGNSTQKMFWKDPRVLFFSVH 209
GI+ ++LIVDWD+HHGN TQ +F+ DP VL+ S+H
Sbjct: 878 ISADAEALKRFGIHSDIPIQPSTTSVQARRVLIVDWDIHHGNGTQTVFYSDPSVLYISLH 937
Query: 210 RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC-GDADYLAVWDHILLPVAKDFG 268
R++ G F+P G IG GPG+GY IN+ W G DA+YLA + I+LPVA +F
Sbjct: 938 RYDGGGFFPGT--GAPEEIGSGPGIGYTINIAWPTGVVMADAEYLAAFRLIVLPVALEFQ 995
Query: 269 PDIIIISAGFDAAAGDP--LGGCRVTPYGYSVMLKKLMD--FAQGKIVLALEGGYNLGSI 324
PD++I+SAGFDAA G P LGG V+P + M + L + A+ +IVLALEGGY L S+
Sbjct: 996 PDLVIVSAGFDAAPGHPASLGGYNVSPAAFGWMTRLLCNQKIARARIVLALEGGYELNSL 1055
Query: 325 SNSVLACMNVLL 336
AC+ LL
Sbjct: 1056 CECTEACVRSLL 1067
>gi|443704447|gb|ELU01509.1| hypothetical protein CAPTEDRAFT_173494 [Capitella teleta]
Length = 365
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 202/358 (56%), Gaps = 7/358 (1%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ G +YD+RM H H EN RI + L+ +G + CV + ++ A D L V
Sbjct: 8 KTGYVYDDRMTLHQNAKKPDHVENSARITVPFQMLKESGALEDCVNIPSRLATDDELSLV 67
Query: 74 HTENHVNLIKNISSKQFDSRRD--RIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
HT ++ +K S +S + +I K S Y++ ++ +A G +++ + V
Sbjct: 68 HTAKYIEQLKQYGSLPAESMENPCKIEEKWPS-YISNDVFISSSVAVGCALQLTDAVCTN 126
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
++ + A+VRPPGHHAE DE+ GFC +NNVA+A + + + G+ ++LIVDWD+H GN
Sbjct: 127 KVKNGVAVVRPPGHHAEVDESCGFCFFNNVAIATRY---AQKKHGLKRVLIVDWDIHFGN 183
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
+F DP VL+ S+HR++ G ++P +G +G+ G G++INV W GD++
Sbjct: 184 GIHNIFSDDPSVLYISLHRYDNGDYFPGLTEGCIESVGKNQGEGFSINVAWNKDIMGDSE 243
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
Y +D I++P A F PD+II++AGFDA DPLG +T Y+ M +KL+ G++
Sbjct: 244 YKRAFDSIVMPAANQFNPDLIIVAAGFDAVVSDPLGDYVLTTDMYAYMTQKLLRIGTGRV 303
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-PFESTWRVIQAVRKKLSAFW 368
+L LEGGYN +I + ++AC VL+ DK + + P + IQ V + S +W
Sbjct: 304 ILMLEGGYNAHAIGDCLVACTRVLMGDKDQRINLDIKEPCRRALQTIQRVIQCHSKYW 361
>gi|410908385|ref|XP_003967671.1| PREDICTED: histone deacetylase 10-like [Takifugu rubripes]
Length = 589
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 189/336 (56%), Gaps = 7/336 (2%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+YD+ M + D + E P R+ + L G+ RCV + +EA D ++L
Sbjct: 3 TALIYDDEMTNYKLLWVDPACNIEVPERLTVCYEALMRTGLADRCVSIPVREATDADILL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+E ++ +K + + +Y + A LAAG+ +++ + V G
Sbjct: 63 VHSEEYLEAVKKTPYMTLAELME-FTLQYGDVYFHPNIYHCAKLAAGAALQLVDSVMTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH+ A GFC++NNVA+AA + R + G+ ++LIVDWD+HHG
Sbjct: 122 VRTGMALVRPPGHHSMRSAANGFCVFNNVAIAARY---ARQKYGLERVLIVDWDIHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q F DP VL+FS HR+E F+P + Y +G+ G G+NINVPW ++DY
Sbjct: 179 VQYCFEDDPSVLYFSWHRYEHQKFWPNLRESDYDTVGKEKGAGFNINVPWNRVGMRNSDY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
L+V+ HILLPVA +F PD++++ AGFD+A GDP G +P ++ + LM+ A GK+
Sbjct: 239 LSVFFHILLPVAYEFCPDLVLVCAGFDSAIGDPEGEMCASPDIFAHLTHLLMNLAGGKLC 298
Query: 313 LALEGGYNLGSISNSVLACMNVLLED-KPVAGSSEA 347
LEGGYNL S+ SV + LL D P GS E
Sbjct: 299 AVLEGGYNLTSLPQSVCQTVQTLLGDPAPPPGSLEG 334
>gi|302343340|ref|YP_003807869.1| histone deacetylase superfamily protein [Desulfarculus baarsii DSM
2075]
gi|301639953|gb|ADK85275.1| histone deacetylase superfamily [Desulfarculus baarsii DSM 2075]
Length = 343
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 206/361 (57%), Gaps = 30/361 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
+GL++ +H+ G +H E P R++ + ++ + C + ++A + L VH
Sbjct: 3 IGLVHHPVFQEHDP--GRFHVEVPGRLRVLDQAMRGWTGLRNCQRMPLRQATEAELRRVH 60
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
H+ + K D S S EAA LAAGS+I++ +R G
Sbjct: 61 HPAHIARVAATEGKHTALDADTGVSPR--------SFEAALLAAGSLIDLCDRAMIGHFY 112
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHHA PD AMGFCL+NNVAVAA+ L+ R G+ ++LIVDWDVHHGN T+
Sbjct: 113 NGMALVRPPGHHATPDRAMGFCLFNNVAVAAAHLIEAR---GLERVLIVDWDVHHGNGTE 169
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F+ + RV++FS H+ YP + G + +G G G G +N P GR GD +Y+
Sbjct: 170 DTFYSEGRVMYFSTHQ---SPMYPGS--GPVSAVGSGAGEGRTVNAPMSAGR-GDLEYIR 223
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM----DFAQGK 310
V+ +L P+A+ F P I++SAGFDA DPLGG R+T G++ + + LM +F G+
Sbjct: 224 VFKDLLTPIARCFKPQFILVSAGFDAHHEDPLGGMRITSSGFAALTQILMELSSEFCPGR 283
Query: 311 IVLALEGGYNLGSISNSVLACMNVLL---EDKPVAGSSEAYPFESTWRVIQAVRKKLSAF 367
+VL LEGGY + +++ SVLAC++VL ED+ +A ++E P R+I R+ + +
Sbjct: 284 LVLTLEGGYAVSALARSVLACLDVLAGRREDELIAQAAEVEP----PRIIARSREIMGGY 339
Query: 368 W 368
W
Sbjct: 340 W 340
>gi|85860006|ref|YP_462208.1| histone deacetylase family protein [Syntrophus aciditrophicus SB]
gi|85723097|gb|ABC78040.1| histone deacetylase family protein [Syntrophus aciditrophicus SB]
Length = 350
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 198/327 (60%), Gaps = 22/327 (6%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
++ G++ DER H T G HPE+P R++ I++ L+ + R + A+EA+ L
Sbjct: 2 KKTGVVKDERYMNHLTGPG--HPESPRRLEVIYDMLEDRDMQGRFQDVPAREARMDELHL 59
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+H ++VN + + + ++ + + GS +AA LAAG + E VA G+
Sbjct: 60 IHLPDYVNRVASTARMEYSCLDPDTDT-------SPGSYKAALLAAGGLCEAISMVASGK 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
L++AFA+VRPPGHHAE D + GFCL+NNVA+ A + + L + +ILI+DWD+HHGN
Sbjct: 113 LDNAFALVRPPGHHAEADRSKGFCLFNNVAIGARY---AQTALHLQRILIIDWDLHHGNG 169
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ F DP +L+FS H++ ++P G +G GLG+ +NVP G GD +Y
Sbjct: 170 TQHSFETDPSILYFSTHQYP---YFPGT--GACDEVGRRTGLGFTVNVPLSRGY-GDGEY 223
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
A+++ IL +A +F PD+I++SAGFD GDPLGG RV+P G++ + + ++D A
Sbjct: 224 AAIFEKILKSIAPEFSPDLILVSAGFDIYGGDPLGGMRVSPKGFAGLTRLIVDIAVSCCS 283
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVL 335
GK+VL LEGGY+L + +SV A + L
Sbjct: 284 GKVVLTLEGGYDLTGLRDSVKAVLKEL 310
>gi|405375535|ref|ZP_11029564.1| Acetylspermidine deacetylase [Chondromyces apiculatus DSM 436]
gi|397086166|gb|EJJ17301.1| Acetylspermidine deacetylase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 341
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 207/364 (56%), Gaps = 37/364 (10%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA-KEAKDKNLLSVHT 75
LL D +H+ G HPE+P+R++ I L +A P + +L A + A D L +VHT
Sbjct: 6 LLTDPLFFQHDP--GQGHPESPSRLRRILGVLASA--PVKGTLLTAPRSATDAELAAVHT 61
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+ ++ ++ ++ D + S S +AA LAAG+ I+ E V +GE +
Sbjct: 62 PELLAYLQRLNGQKAQVDADTLVSP--------DSVDAARLAAGASIQAVEAVMKGEARN 113
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
AFA+VRPPGHHAEPD+AMGFCL NN A+AA LG ++L++DWDVHHGN TQ
Sbjct: 114 AFALVRPPGHHAEPDKAMGFCLLNNAAIAA----EAGRRLGAERVLVLDWDVHHGNGTQA 169
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
FWK V++ SVH+ +YP G +G GPG GY +NV G DADY +
Sbjct: 170 AFWKRRDVMYQSVHQF---PYYPGT--GAADEVGRGPGEGYTVNVGLPGGNS-DADYGMI 223
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM---LKKLMDFA-QGKI 311
++ +LLPVA F P +I++SAGFD+ DP+GG V+ G++ M +K L D A G++
Sbjct: 224 FEELLLPVADAFKPQLILVSAGFDSHQHDPIGGMDVSERGFAAMCSAMKSLADSACDGRL 283
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYP----FESTWRVIQAVRKKLSAF 367
VL LEGGY+L +S SV AC+ VL AG +++P ++A R + +
Sbjct: 284 VLLLEGGYSLEGLSQSVHACVEVL------AGRKDSFPTGDVHADARDALKASRDAMRPY 337
Query: 368 WPTL 371
WP +
Sbjct: 338 WPRM 341
>gi|307106472|gb|EFN54718.1| hypothetical protein CHLNCDRAFT_24556 [Chlorella variabilis]
Length = 379
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 190/312 (60%), Gaps = 15/312 (4%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
HPE P+R++A+ +LQAA + RC L A+EA + + H + + +S +
Sbjct: 2 HPERPDRVRAVMARLQAAQLAGRCRRLPAREATPAEVQACHIPELLEAVDVLSEQA---- 57
Query: 94 RDRIASKLN---SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD 150
R + + L+ Y+N+ ++ A L+AG+ ++VA V GE + A+VRPPGHHAE +
Sbjct: 58 RLQGGAGLHFSPDTYVNQHTAMCAKLSAGACVDVAAAVVRGEARAGVAVVRPPGHHAESN 117
Query: 151 EAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHR 210
AMGFC +NN +AA E ++L++DWDVHHGN TQ +F DP VL+ S+HR
Sbjct: 118 TAMGFCFFNNAGIAARAAQAAGAE----RVLVLDWDVHHGNGTQHIFEGDPSVLYMSLHR 173
Query: 211 HEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPD 270
H+ G+FYP G +GEG G GY +NVPW G + DYLA + H+LLP+A ++ PD
Sbjct: 174 HDGGSFYPGT--GAAHEVGEGEGAGYTVNVPWPCGGMRNGDYLAAFHHLLLPIAYEYAPD 231
Query: 271 IIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLA 330
++IISAGFDAA GDP+GGC +TP Y+ M +L A V LEGGYNL S + A
Sbjct: 232 LVIISAGFDAAEGDPIGGCHLTPECYAHMAAQLQLVA--PTVALLEGGYNLLSTAKGTEA 289
Query: 331 CMNVLLEDKPVA 342
+ VLL ++P A
Sbjct: 290 VVRVLLGERPPA 301
>gi|159125932|gb|EDP51048.1| histone deacetylase HdaA [Aspergillus fumigatus A1163]
Length = 602
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 202/376 (53%), Gaps = 37/376 (9%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----PQRCVV------LNA 62
GL YD +M H P D HPE+P RI I+ +L AG+ R +V ++A
Sbjct: 133 GLCYDVQMRYHCEVRPTADVHPEDPRRIYYIYKELCRAGLVDDPESSRPLVARPLKRIHA 192
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A + + +HT +H +++ + D + +SIY N+ + ++ L+ G I
Sbjct: 193 RNATEAEISLIHTPDHFAFVES-TKDMSDDELIALEHTRDSIYFNKLTFASSLLSVGGAI 251
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV++AA
Sbjct: 252 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSIAARVC-------------- 297
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
N QK F+ DP VL+ S+H ++ G FYP D+G + G G+G N+N+PW
Sbjct: 298 --------NGIQKAFYDDPNVLYISLHVYQDGKFYPGGDEGDWDHCGADAGIGKNVNIPW 349
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GD DY+ + +++P+A++F PD++I+++GFDAAAGD LGGC VTP Y+ M
Sbjct: 350 PSQGMGDGDYMYAFQQVVMPIAQEFNPDLVIVASGFDAAAGDELGGCFVTPSCYAHMTHM 409
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
LM A GK+ + LEGGYN SIS S LA L+ D P S P + ++ V
Sbjct: 410 LMTLAHGKVAVCLEGGYNFRSISKSALAVTKTLMGDPPDRLHS-TLPSDLATSTVRRVMM 468
Query: 363 KLSAFWPTLADELPTK 378
S +W + ++P +
Sbjct: 469 IQSRYWRCMYPKVPQE 484
>gi|70985276|ref|XP_748144.1| histone deacetylase HdaA [Aspergillus fumigatus Af293]
gi|66845772|gb|EAL86106.1| histone deacetylase HdaA [Aspergillus fumigatus Af293]
Length = 602
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 202/376 (53%), Gaps = 37/376 (9%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----PQRCVV------LNA 62
GL YD +M H P D HPE+P RI I+ +L AG+ R +V ++A
Sbjct: 133 GLCYDVQMRYHCEVRPTADVHPEDPRRIYYIYKELCRAGLVDDPESSRPLVARPLKRIHA 192
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A + + +HT +H +++ + D + +SIY N+ + ++ L+ G I
Sbjct: 193 RNATEAEISLIHTPDHFAFVES-TKDMSDDELIALEHTRDSIYFNKLTFASSLLSVGGAI 251
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV++AA
Sbjct: 252 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSIAARVC-------------- 297
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
N QK F+ DP VL+ S+H ++ G FYP D+G + G G+G N+N+PW
Sbjct: 298 --------NGIQKAFYDDPNVLYISLHVYQDGKFYPGGDEGDWDHCGADAGIGKNVNIPW 349
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ GD DY+ + +++P+A++F PD++I+++GFDAAAGD LGGC VTP Y+ M
Sbjct: 350 PSQGMGDGDYMYAFQQVVMPIAQEFNPDLVIVASGFDAAAGDELGGCFVTPSCYAHMTHM 409
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
LM A GK+ + LEGGYN SIS S LA L+ D P S P + ++ V
Sbjct: 410 LMTLAHGKVAVCLEGGYNFRSISKSALAVTKTLMGDPPDRLHS-TLPSDLATSTVRRVMM 468
Query: 363 KLSAFWPTLADELPTK 378
S +W + ++P +
Sbjct: 469 IQSRYWRCMYPKVPQE 484
>gi|426227236|ref|XP_004007727.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 10 [Ovis aries]
Length = 735
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
LL+D+ C+ E P R+ +LQ G+ QRC+ L A+EA + L VH+
Sbjct: 16 LLWDDPECEI---------ECPERLTTALERLQQRGLEQRCLRLVAREASEAELGLVHSP 66
Query: 77 NHVNLIKNISSKQFDSRRDRIASK-LNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+V L++ ++ +R + SK +++YL+ + A LAAG+ +++ + V G + +
Sbjct: 67 EYVALLRG--TQALGTRELQALSKQYDAVYLHPSTFHCARLAAGAALQLVDAVLTGAVRN 124
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
A+VRPPGHH++ A GFC++NNVA+AA + + + G+++ILIVDWD+HHG Q
Sbjct: 125 GLALVRPPGHHSQRATANGFCVFNNVAIAAK---HAQQKHGLHRILIVDWDIHHGQGIQY 181
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 182 IFEDDPSVLYFSWHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQVGMGNADYVAA 241
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA- 314
+ H+LLP+A +F P+++++SAGFD+A GDP G TP ++ L +L+ +G+
Sbjct: 242 FLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMLATPECFA-HLTQLLQVLKGEGAWPE 300
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
GGY+L S+S SV + LL D + S P S +Q VR + W +L +
Sbjct: 301 AGGGYHLESLSQSVCMMVQALLGDPALPLSGPMEPHGSALESLQCVRAAQAPHWVSLRQQ 360
>gi|355694233|gb|AER99601.1| Histone deacetylase 5 [Mustela putorius furo]
Length = 1000
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 199/327 (60%), Gaps = 29/327 (8%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 679 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 738
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 739 VHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 798
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ L + +L
Sbjct: 799 MAVGCLVELAFKVASGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLL---QQKL 855
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
++K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 856 NVSKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 913
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G PLGG
Sbjct: 914 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYS 973
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEG 317
VT + + ++LM A G++VLAL G
Sbjct: 974 VTARCFGHLTRQLMTLAGGRVVLALGG 1000
>gi|395744268|ref|XP_002823190.2| PREDICTED: histone deacetylase 7 [Pongo abelii]
Length = 959
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 129/308 (41%), Positives = 183/308 (59%), Gaps = 29/308 (9%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 553 RTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 612
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH+E HV L + ++A L ++I+
Sbjct: 613 LEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELH 672
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 673 SSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQ 732
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 733 QQS---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVG 787
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 788 AGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 847
Query: 285 PLGGCRVT 292
PLGG V+
Sbjct: 848 PLGGYHVS 855
>gi|291414043|ref|XP_002723276.1| PREDICTED: histone deacetylase 10-like [Oryctolagus cuniculus]
Length = 1361
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 217/370 (58%), Gaps = 15/370 (4%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
LL+D+ C+ E P R+ A + L+ G+ QRC L+A++A + L VH+
Sbjct: 16 LLWDDPQCQI---------ECPARLDAALSGLRQCGLEQRCFRLSARKASEAELGLVHSP 66
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
+V L++ + + ++++ +++Y + + A LAAG+ +++ + V G + +
Sbjct: 67 EYVALVRGTQALA-EQELQALSAQFDAVYFHPRTYHCAQLAAGAALQLVDAVLTGTVRNG 125
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
A+VRPPGHH++ A GFC++NNVA+AA + + + G+++ILIVDWD+HHG Q +
Sbjct: 126 LALVRPPGHHSQRAAANGFCVFNNVAIAAQ---HAKQKHGLHRILIVDWDIHHGQGIQYI 182
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
F DP VL+FS HR+E G F+P + +G+G G G+ +N+PW GD DY+A +
Sbjct: 183 FEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGQGQGRGFTVNLPWNQVGMGDPDYMAAF 242
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALE 316
H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G++ LE
Sbjct: 243 LHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTRLLQVLAGGRVCAVLE 302
Query: 317 GGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELP 376
GGY+L S ++SV + LL D + S P S IQ+V++ + W +L + P
Sbjct: 303 GGYHLESSAHSVCMTVRALLGDPILPLSGPMVPCHSALESIQSVQRAHAPHWRSL--QQP 360
Query: 377 TKLTSLKAPP 386
+ + +PP
Sbjct: 361 GRSSGTCSPP 370
>gi|403377358|gb|EJY88672.1| Histone deacetylase family protein [Oxytricha trifallax]
Length = 579
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 193/343 (56%), Gaps = 18/343 (5%)
Query: 5 SGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE 64
S + + +K +VG+++DE M H ++HPE P R AI+ L GI L +
Sbjct: 110 SKQIQMVKPKVGVVFDEEMLLHKN-HREHHPERPERAMAIYLNLLNKGIYIELRPLEVEP 168
Query: 65 AKDKNLLSVHTENHVNLIKNI-SSKQFDSRRDRIASKLNSI------YLNEGSSEAAYLA 117
A+DK L VH +H+ IKNI ++ + +A N+ Y N+ ++ +AY++
Sbjct: 169 AEDKYLELVHPHSHIQKIKNIIYDPKYKDKETLLALHHNTFRFQKDTYENKHTATSAYMS 228
Query: 118 AGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI 177
AG IE V E++SAF I+RPPGHHA A GFC +NN AVAA + + E GI
Sbjct: 229 AGGAIEGTRAVLNNEVDSAFCIIRPPGHHASCQNAAGFCFFNNAAVAARYA---QKEFGI 285
Query: 178 NKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN 237
K+ I DWDVH G+ T +F++D VL+ S+HR + G FYP G + +G+ G GYN
Sbjct: 286 KKVAIFDWDVHVGDGTSDVFYEDDSVLYMSIHRFDNGAFYPG-PAGKHNKVGDHKGRGYN 344
Query: 238 INVPW-----ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
I+ P+ GD DY+ + + +P+ K+F P+ IISAGFD+A GDPLG VT
Sbjct: 345 IHFPFNVEKNHKNLVGDTDYIYAVEQVFIPLIKEFQPEFFIISAGFDSALGDPLGQVGVT 404
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
P GY+ M + +VL LEGGY+L ++S S A + +L
Sbjct: 405 PLGYAYMTQVFRQLCPRTVVL-LEGGYDLHALSVSSEAVVQML 446
>gi|226290884|gb|EEH46312.1| histone deacetylase hda1 [Paracoccidioides brasiliensis Pb18]
Length = 770
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 203/374 (54%), Gaps = 51/374 (13%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI--------PQRCVVLN--- 61
GL YD RM H P D HPE+P RI I+ +L AG+ P + L+
Sbjct: 126 TGLCYDIRMRYHCEVKPTLDVHPEDPRRIYYIYKELCKAGLVEDPESSKPLVSLPLHRIL 185
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAG 119
A++A ++ + VH H +K S+K S D IA +SIY N + +A L+ G
Sbjct: 186 ARDATEEEIALVHDPEHYAFVK--STKDM-SEDDLIALEHTRDSIYFNSLTFTSAILSCG 242
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
IE + V + ++ +A A++RPPGHHAE ++ MGFCL+NNV VAA E E K
Sbjct: 243 GAIETCKAVVDRQVKNAIAVIRPPGHHAEHNKTMGFCLFNNVCVAARVCQREFGE-KCRK 301
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
ILI+DWD G+FYP D+G + GEG GLG NIN
Sbjct: 302 ILILDWD---------------------------GSFYPGGDEGNWDHCGEGNGLGKNIN 334
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+PW GD DY+ + +++P+A +F PD++IISAGFDAAAGD LGGC VTP Y+ M
Sbjct: 335 IPWPTQGMGDGDYMYAFQEVIMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYAHM 394
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP--VAGSSEAYPFESTWRVI 357
+ LM+ A GK+ + LEGGYN SIS S LA L+ + P + +S + P T + +
Sbjct: 395 TRMLMNLAGGKVAVCLEGGYNFRSISKSALAVTRTLMGEPPDRLYSASASRPAVHTVKRV 454
Query: 358 QAVRKKLSAFWPTL 371
++ SA+W ++
Sbjct: 455 AMIQ---SAYWKSI 465
>gi|225679174|gb|EEH17458.1| histone deacetylase HdaA [Paracoccidioides brasiliensis Pb03]
Length = 740
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/382 (38%), Positives = 207/382 (54%), Gaps = 51/382 (13%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI--------PQRCVVLN--- 61
GL YD RM H P D HPE+P RI I+ +L AG+ P + L+
Sbjct: 126 TGLCYDIRMRYHCEVKPTLDVHPEDPRRIYYIYKELCKAGLVEDPESSKPLVSLPLHRIL 185
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIA--SKLNSIYLNEGSSEAAYLAAG 119
A++A ++ + VH H +K S+K S D IA +SIY N + +A L+ G
Sbjct: 186 ARDATEEEIALVHDPEHYAFVK--STKDM-SEDDLIALEHTRDSIYFNSLTFTSAILSCG 242
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
IE + V + ++ +A A++RPPGHHAE ++ MGFCL+NNV VAA E E K
Sbjct: 243 GAIETCKAVVDRQVKNAIAVIRPPGHHAEHNKTMGFCLFNNVCVAARVCQREFGE-KCRK 301
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
ILI+DWD G+FYP D+G + GEG GLG NIN
Sbjct: 302 ILILDWD---------------------------GSFYPGGDEGNWDHCGEGNGLGKNIN 334
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
+PW GD DY+ + +++P+A +F PD++IISAGFDAAAGD LGGC VTP Y+ M
Sbjct: 335 IPWPTQGMGDGDYMYAFQEVIMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYAHM 394
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP--VAGSSEAYPFESTWRVI 357
+ LM+ A GK+ + LEGGYN SIS S LA L+ + P + +S + P T + +
Sbjct: 395 TRMLMNLAGGKVAVCLEGGYNFRSISKSALAVTRTLMGEPPDRLYSASASRPAVHTVKRV 454
Query: 358 QAVRKKLSAFWPTLADELPTKL 379
++ SA+W ++ + P ++
Sbjct: 455 AMIQ---SAYWKSIYPKGPPEI 473
>gi|449674033|ref|XP_002162568.2| PREDICTED: histone deacetylase 6-like [Hydra magnipapillata]
Length = 367
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 193/341 (56%), Gaps = 26/341 (7%)
Query: 13 RRVGLLYDERMCKHNTPDG----DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDK 68
R+VG++YDE +H P G HPE P+R+ A + L+ + + V + ++ A
Sbjct: 4 RKVGIVYDEAFQQHQHPRGLSRGFMHPEIPDRVSAPYAYLKKKDVLDKLVHIKSRPATIS 63
Query: 69 NLLSVHTENHVNLIKNISSK-------QFDSRRDRIASKLN------SIYLNEGSSEAAY 115
L VH E +VN +KN +FD +D L Y++E + E A
Sbjct: 64 ELSLVHDEEYVNRLKNAKITDHESIFAKFDLIKDIKVENLQFENDKWDSYIHEKTYETAL 123
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+AGS +++ E V ++S FA++RPPGHHAE A GFC +NNVA+AA + +
Sbjct: 124 LSAGSALQLTEAVLNNVIDSGFALIRPPGHHAEACYAAGFCYFNNVAIAARYAQLQ---- 179
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
G KILIVDWD+HHGN Q MF+ D VL+ S+HR+ YP + IGE GLG
Sbjct: 180 GAKKILIVDWDIHHGNGIQDMFYDDDSVLYISLHRY---YTYPDLEKAKAEYIGEKKGLG 236
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+NIN+ W+ G+ +Y ++ ++LPVA+ F PD+I++S GFDAA GDPLG V+
Sbjct: 237 FNINIAWDETPMGECEYKLAFEEVVLPVARKFAPDLILVSCGFDAARGDPLGEFDVSINT 296
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
YS M +L++ + K L LEGGYN ++ N V A + LL
Sbjct: 297 YSWMTTRLLEIS--KTALFLEGGYNNENLCNGVYAVIMSLL 335
>gi|290972384|ref|XP_002668933.1| histone deacetylase [Naegleria gruberi]
gi|284082471|gb|EFC36189.1| histone deacetylase [Naegleria gruberi]
Length = 1316
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 195/339 (57%), Gaps = 25/339 (7%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
++ GLLYD RMC H+ P PE P RI IWN +Q + C ++ ++E + L
Sbjct: 366 KKTGLLYDARMCLHDGP----IPETPVRISHIWNMIQEHNLLDECEIMKSREVTQQELAL 421
Query: 73 VHTENHVNLIK------NISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAE 126
VHTE +++ N ++ + R + + I +N+ S +AA LAAG VI++ E
Sbjct: 422 VHTEKYIDDFFEFKGQFNPTTSNHNLLRGIVQDNEHDIQINQFSLKAARLAAGGVIKLTE 481
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
+V GEL + AIVRPPGHHA+ ++ MGFC +NN AVAA + + ++ I+D+D
Sbjct: 482 KVLNGELENGMAIVRPPGHHAQTEDPMGFCFFNNAAVAARVAQQFK---SVGRVAIIDFD 538
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW---- 242
+HHGN TQ++F DP +L+ S+HR E ++P G +G G G GY +N+P
Sbjct: 539 IHHGNGTQEIFEDDPSILYVSIHRFE-QNYFPGT--GSLEEVGIGKGEGYTLNIPLPPKD 595
Query: 243 ----ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLG-GCRVTPYGYS 297
GD+DY+A++ +++PV +F PD++I+SAGFDAA GD LG +TP GY
Sbjct: 596 YKIPSTATFGDSDYIAIFRQLIIPVCTEFAPDLVIVSAGFDAAKGDILGRRMSLTPSGYE 655
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
++ L A GKIVLALEGGY ++ A + LL
Sbjct: 656 HIIGMLKQLAGGKIVLALEGGYKTDVTASCATASLRSLL 694
>gi|9759453|dbj|BAB10369.1| unnamed protein product [Arabidopsis thaliana]
Length = 233
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 145/199 (72%), Gaps = 8/199 (4%)
Query: 413 LSKLKVDDGHAEL-------GMATPWRSELSKVDVFYASFGSNMWKSRFLCYIEGGQVEG 465
+SKL +++ L +T WR++L+KVDV+YASFGSNMWK RFLCYI+GGQV+G
Sbjct: 1 MSKLSIENPQGTLLENHQVEPASTSWRADLAKVDVWYASFGSNMWKPRFLCYIQGGQVDG 60
Query: 466 MQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAYLCLYR 525
++K C GS D++PPKE +W+TFPH LFFG +SS WG GGVAF NP + + ++CLYR
Sbjct: 61 LKKVCVGSMDKSPPKETVWETFPHRLFFGRESSVGWGVGGVAFTNPLANLIDQTHMCLYR 120
Query: 526 ITLEQFNDVLLQENVYSDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKEHG 585
ITLEQFNDVL QEN + D SP+FD L V NK ++ LEA N WY NVV LGKE
Sbjct: 121 ITLEQFNDVLSQENGLNVDSDSPVFDLAALQLVDNKGSI-LEAPLNSWYGNVVCLGKERD 179
Query: 586 IPILTMTCSLSAVGKFKSG 604
IPILTMTC+LSAV KFKSG
Sbjct: 180 IPILTMTCTLSAVEKFKSG 198
>gi|338532993|ref|YP_004666327.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
gi|337259089|gb|AEI65249.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
Length = 341
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 206/363 (56%), Gaps = 39/363 (10%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA-KEAKDKNLLSVHT 75
LL D +H+ G HPE+P+R++ I L A P + V+ A + A L SVHT
Sbjct: 6 LLTDPLFFQHDPGQG--HPESPSRLRRILGVL--ASTPVKGTVMTAPRSATAAELASVHT 61
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ + ++S S+L+ +++ S +AA LAAG+ ++ E V GE
Sbjct: 62 PELLAYLASLSGH---------VSQLDPDTHVSPDSIDAARLAAGASVQAVEAVMRGEAR 112
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+AFA+VRPPGHHAEPD+AMGFCLYNN A+AA +LG ++L++DWDVHHGN TQ
Sbjct: 113 NAFALVRPPGHHAEPDKAMGFCLYNNAAIAA----EAGRKLGAERVLVLDWDVHHGNGTQ 168
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
FW V++ SVH+ +YP T GEG G N+ +P N DADY
Sbjct: 169 AAFWSRRDVMYQSVHQF---PYYPGTGAAQETGTGEGEGYTVNVGLPGGN---SDADYGM 222
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM---LKKLMD-FAQGK 310
+++ +LLPVA+ + P +I++SAGFD+ DP+GG V+ G++ M +K L D QG+
Sbjct: 223 IFEELLLPVAEAYRPQLILVSAGFDSHQHDPIGGMDVSERGFAAMCSAMKSLADSVCQGR 282
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR----VIQAVRKKLSA 366
+VL LEGGY+L +S SV AC+ VL AG +++P T ++ R+ L
Sbjct: 283 LVLLLEGGYSLEGLSQSVHACVEVL------AGRRDSFPTGDTHADARDALRTSREALRP 336
Query: 367 FWP 369
+WP
Sbjct: 337 YWP 339
>gi|302415745|ref|XP_003005704.1| histone deacetylase clr3 [Verticillium albo-atrum VaMs.102]
gi|261355120|gb|EEY17548.1| histone deacetylase clr3 [Verticillium albo-atrum VaMs.102]
Length = 386
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 184/316 (58%), Gaps = 36/316 (11%)
Query: 11 IKRR----VGLLYDERM---CKHNTPDGDYHPENPNRIKAIWNKLQAAGI----PQRCVV 59
++RR G YD+RM C + +HPE+P RI+ I + AG+ P+ V
Sbjct: 66 LRRRGQLPTGCCYDDRMKLHCNADFTSHPHHPEDPRRIEEIIKAFKKAGLLYTGPEANVA 125
Query: 60 -------------LNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLN---- 102
+ A+EA + +L HT +H ++N+S+ + R ++ +L+
Sbjct: 126 KIVQDTPTKYMWRIAAREAAKEEILLAHTPDHFAWVENLSTMSYTELR-ALSVELDKGRA 184
Query: 103 SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVA 162
S+Y+ S AA L+ G I+ ++V E + +AFA++RPPGHHAE D+++GFC +NNV
Sbjct: 185 SLYVGSLSFPAALLSCGGAIDTCKQVVESNVKNAFAVIRPPGHHAEYDQSLGFCFFNNVP 244
Query: 163 VAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND- 221
VA E PE+ K+L++DWDVHHGN Q +F++DP VL+ S+H +E G FYP
Sbjct: 245 VAVKVCQQEYPEI-CRKVLVLDWDVHHGNGIQNIFYQDPNVLYISIHVYENGQFYPGQPE 303
Query: 222 -----DGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISA 276
DG G GPGLG NIN+ W GD +Y+A + I++P+AK+F PD+++ISA
Sbjct: 304 NPMVPDGGMEHCGTGPGLGKNINIGWHAQGMGDGEYMAAFQKIIMPIAKEFNPDLVVISA 363
Query: 277 GFDAAAGDPLGGCRVT 292
GFDAA GD LGGC VT
Sbjct: 364 GFDAADGDELGGCFVT 379
>gi|149017535|gb|EDL76539.1| rCG59247, isoform CRA_c [Rattus norvegicus]
Length = 666
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 209/370 (56%), Gaps = 8/370 (2%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A + L+ G+ +RC L+ EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEERCQCLSVCEASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASK-LNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VH+ ++ L++ ++ D SK +++Y + + A LAAG+ + + + V G
Sbjct: 63 VHSPEYIALVQK--TQTLDKEELHTLSKQYDAVYFHPDTFHCARLAAGAALRLVDAVLTG 120
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+++ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 121 AVHNGVALVRPPGHHSQRAAANGFCVFNNVAIAAR---HAKQKYGLQRILIVDWDVHHGQ 177
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
Q +F DP VL+FS HR+E G F+P + +G G G G+ +N+PW G+AD
Sbjct: 178 GIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQVGMGNAD 237
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G+I
Sbjct: 238 YLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRI 297
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D P +S IQ+VR + W +L
Sbjct: 298 CAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLPGLMVPCQSALESIQSVRTAQTPHWTSL 357
Query: 372 ADELPTKLTS 381
+ L+S
Sbjct: 358 QQNVAPVLSS 367
>gi|291392384|ref|XP_002712713.1| PREDICTED: histone deacetylase 9-like, partial [Oryctolagus
cuniculus]
Length = 377
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 206/371 (55%), Gaps = 38/371 (10%)
Query: 68 KNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEGS 110
+ L SVH+E HV L + ++A L ++I+ S
Sbjct: 1 EELQSVHSERHVLLYGTNPLSRLKLDNGKLAELLEQRMFVMLPCGGVGVDTDTIWNELHS 60
Query: 111 SEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLN 170
S AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+VA+A L
Sbjct: 61 SNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQ 120
Query: 171 ERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGE 230
+ +K+LIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 121 QGKA---SKVLIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDGGNFFPGS--GAVDEVGA 175
Query: 231 GPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--P 285
G G G+N+NV W G GD +YLA + +++PVA++F PD++++SAGFDAA G P
Sbjct: 176 GSGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPVAREFSPDLVLVSAGFDAAEGHPAP 235
Query: 286 LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSS 345
LGG RV+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K +
Sbjct: 236 LGGYRVSAKCFGCMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLAE 295
Query: 346 EAY---PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKV 402
E + P + R ++AV + S +W + L A P + D + +
Sbjct: 296 EGWTQKPNLNAIRSLEAVIRVHSKYWGC--------MQRLAACPGSWVPRGPGTDAEVEA 347
Query: 403 ETLEAVLQVAL 413
T A L V +
Sbjct: 348 VTALASLSVGI 358
>gi|198436934|ref|XP_002128142.1| PREDICTED: similar to Histone deacetylase 4 (HD4) [Ciona
intestinalis]
Length = 1094
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 192/351 (54%), Gaps = 32/351 (9%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI-----------PQRCVVLNAK 63
G+ Y M KH D H E+ R++AIW +L + + C +L A+
Sbjct: 586 TGIAYSPVMLKHGCACRDDHTEHAGRLRAIWERLTKSKLVNDPSCGGTSGKSSCELLEAR 645
Query: 64 EAKDKNLLSVHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYLNEG-----------S 110
+A L VHT+ H +++ K+ + I + ++ G +
Sbjct: 646 KATTDELQLVHTQEHTLRYGTTSLARKELELTSKFIVLPCGGVGVDNGIDIDTVWNELDT 705
Query: 111 SEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLN 170
AA +A G +++ VA+ L + FA+VRPPGHHA+ D AM FC +N+VAVAA L +
Sbjct: 706 INAARMAVGCTVDITLEVAQNRLKNGFALVRPPGHHAQKDLAMAFCYFNSVAVAARKLQH 765
Query: 171 ERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGE 230
E P+ + ++LIVDWDVHH N TQ +F+ DP VL S+HR++ G F+P G G
Sbjct: 766 ECPDT-VRRVLIVDWDVHHCNGTQNIFFDDPSVLVISIHRYDSGNFFPGT--GAINECGR 822
Query: 231 GPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP-- 285
G GLGYN+N+ + G DADYLAV+ I+LP+A+ F P +++S GF AA G P
Sbjct: 823 GGGLGYNVNIGFSGGLDPPMEDADYLAVFRTIVLPIARQFDPHFVLVSCGFSAANGHPST 882
Query: 286 LGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
LGG ++TP Y ++ + L + A GKIVL LEGG+ L + + AC+ LL
Sbjct: 883 LGGYKLTPNCYGLLTRLLSEVAGGKIVLVLEGGFELEPLCDCTEACVRTLL 933
>gi|355560778|gb|EHH17464.1| hypothetical protein EGK_13878, partial [Macaca mulatta]
Length = 935
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 182/302 (60%), Gaps = 29/302 (9%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 636 TGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 695
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 696 VHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 755
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 756 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 812
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 813 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 870
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 871 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 930
Query: 291 VT 292
VT
Sbjct: 931 VT 932
>gi|108760712|ref|YP_634045.1| histone deacetylase [Myxococcus xanthus DK 1622]
gi|108464592|gb|ABF89777.1| histone deacetylase family protein [Myxococcus xanthus DK 1622]
Length = 347
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 207/364 (56%), Gaps = 37/364 (10%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA-KEAKDKNLLSVHT 75
LL D +H+ G HPE+P+R++ I L A P + V+ A + A + L SVHT
Sbjct: 12 LLTDPLFFQHDP--GQGHPESPSRLRRILGVL--ASTPVKGTVMTAPRSATEAELASVHT 67
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+ ++ I+ + D ++ S +AA LAAG+ ++ E V +GE +
Sbjct: 68 PELLAYLQRINGHRAQIDPD--------TQVSPDSVDAARLAAGASVQAVEAVMKGEARN 119
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
FA+VRPPGHHAEPD+AMGFCLYNN A+AA +LG ++L++DWDVHHGN TQ
Sbjct: 120 GFALVRPPGHHAEPDKAMGFCLYNNAAIAA----EAGRKLGAERVLVLDWDVHHGNGTQA 175
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
FW V++ SVH+ ++P G +G G G GY INV G DADY +
Sbjct: 176 AFWSRRDVMYQSVHQF---PYFPGT--GAAPEVGVGAGEGYTINVGLPGGNS-DADYGMI 229
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM---LKKLMD-FAQGKI 311
++ +LLPVA+ + P +I++SAGFD+ DP+GG V+ G++ M +K L D QG++
Sbjct: 230 FEELLLPVAEAYRPQLILVSAGFDSHQHDPIGGMDVSERGFAAMCSAMKSLADSVCQGRL 289
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR----VIQAVRKKLSAF 367
VL LEGGY+L +S SV AC+ VL AG +++P T ++A R+ + +
Sbjct: 290 VLLLEGGYSLEGLSQSVHACVEVL------AGRKDSFPTGDTHADAKDALRASREAMRPY 343
Query: 368 WPTL 371
WP +
Sbjct: 344 WPRV 347
>gi|442323459|ref|YP_007363480.1| histone deacetylase [Myxococcus stipitatus DSM 14675]
gi|441491101|gb|AGC47796.1| histone deacetylase [Myxococcus stipitatus DSM 14675]
Length = 342
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/365 (38%), Positives = 202/365 (55%), Gaps = 37/365 (10%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNA-KEAKDKNLLSVHT 75
LL D +H+ G+ HPE+P R++ I L A P R V+ + A D L +VHT
Sbjct: 6 LLTDPLFLQHDP--GESHPESPARLQRILGVLARA--PVRGTVMAPPRSATDAELAAVHT 61
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+ +K +S ++ AS +++ S +AA LAAG+ ++ E V G+ +
Sbjct: 62 PQLLARLKELSGRR--------ASIDPDTHVSADSVDAARLAAGASVQAVEMVMAGKARN 113
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
AFA+VRPPGHHAEPD AMGFCL NN A+AA LG ++L++DWDVHHGN TQ
Sbjct: 114 AFALVRPPGHHAEPDRAMGFCLLNNAAIAA----EAGRRLGAERVLVLDWDVHHGNGTQA 169
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
FW V++ SVH+ +YP G +G G G GY +NV G DADY +
Sbjct: 170 AFWGRRDVMYQSVHQFP---YYPGT--GATPEVGTGAGEGYTVNVGLPGGNS-DADYGML 223
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKI 311
++ +LLPVA+ F P ++++SAGFD DP+GG VT G++ M + A+ GK+
Sbjct: 224 FEELLLPVAESFRPQLVLVSAGFDPHYHDPIGGMDVTERGFAAMCTAMRSLAERVCDGKL 283
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTW----RVIQAVRKKLSAF 367
VL LEGGY+L +S SV AC+ VL AG ++++P T + A R L +
Sbjct: 284 VLLLEGGYSLEGLSQSVHACVEVL------AGRTDSFPPGDTHTDAKEALVASRAALKPY 337
Query: 368 WPTLA 372
W L+
Sbjct: 338 WSALS 342
>gi|148704923|gb|EDL36870.1| mCG145563 [Mus musculus]
Length = 396
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 163/236 (69%), Gaps = 10/236 (4%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA +A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L
Sbjct: 77 SSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYL- 135
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
R +L I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G
Sbjct: 136 --RDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVG 191
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD-- 284
G G GYN+N+ W G GD +YL + +++PVA++F PD++++SAGFDA G
Sbjct: 192 VGLGEGYNVNIAWTGGLDPPMGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHTP 251
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
PLGG +VT + + K+LM A G++ LALEGG++L +I ++ AC+N LL ++P
Sbjct: 252 PLGGYKVTAKCFGHLTKQLMTLANGRVALALEGGHDLTAICDASEACINALLGNEP 307
>gi|260793163|ref|XP_002591582.1| hypothetical protein BRAFLDRAFT_105116 [Branchiostoma floridae]
gi|229276790|gb|EEN47593.1| hypothetical protein BRAFLDRAFT_105116 [Branchiostoma floridae]
Length = 318
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 184/299 (61%), Gaps = 10/299 (3%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R GL+YDERM H H E+P+R+ +++ LQ G+ RCV + A A ++ +L V
Sbjct: 22 RTGLVYDERMTLHKCSFDLNHVEHPDRVSKMYDYLQEEGLVSRCVRIIAGPATEEVVLLV 81
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNS---IYLNEGSSEAAYLAAGSVIEVAERVAE 130
H+ ++ ++ K+ + ++ KL YL+ A LA G I++ E V +
Sbjct: 82 HSPEYIAQVQ-AWQKEAEVDPNQNPCKLEEGSPTYLSPHVYSCAMLAVGCAIKLVEAVLQ 140
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
GE+++ AI+RPPGHHAE DEA+GFC +NN ++AA + + EL + +ILI+DWD+HHG
Sbjct: 141 GEVDNGLAIIRPPGHHAEMDEAVGFCFFNNTSIAARY---AQTELNVKRILILDWDIHHG 197
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR--CG 248
N TQ F+ DP VL+ S+HR++ G ++P D ++ +GEG G G+N+NV W G G
Sbjct: 198 NGTQHAFYTDPSVLYLSLHRYDQGKYFPYMDASNFSAVGEGKGEGFNVNVAWNKGSEVIG 257
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPL-GGCRVTPYGYSVMLKKLMDF 306
D +Y+A + I+LPVA++F PD++++S GFDAA DPL R++ + ++ ++ F
Sbjct: 258 DLEYIAAFHRIVLPVAQEFNPDLVLVSCGFDAAKKDPLVSNDRLSTVSFMILKNNVVGF 316
>gi|395536995|ref|XP_003770493.1| PREDICTED: histone deacetylase 4-like, partial [Sarcophilus harrisii]
Length = 1086
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 195/335 (58%), Gaps = 35/335 (10%)
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
++I+ SS AA LA G V+E+ +VA GEL + FA+VRPPGHHAE MGFC +N+V
Sbjct: 761 DTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSV 820
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND 221
A+AA LL +R L +NKILIVDWDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P +
Sbjct: 821 AIAAK-LLQQR--LNVNKILIVDWDVHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGS- 876
Query: 222 DGFYTMIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
G +G GPG+G+N+N+ + G GD +YL + +++PVA +FGPD++++S+GF
Sbjct: 877 -GAPDEVGTGPGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPVANEFGPDVVLVSSGF 935
Query: 279 DAAAG--DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL- 335
DA G PLGG + + + K+LM A G+IVLALEGG++L +I ++ AC++ L
Sbjct: 936 DAVEGHPTPLGGYNRSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALL 995
Query: 336 ------LEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHM 389
L DK + S A S +VI+ K +W L T SL
Sbjct: 996 GNELDPLPDKVLQQRSNANAIHSMEKVIETHSK----YWRCLQRFSSTVGYSLL------ 1045
Query: 390 ISSSDSEDEDTKVETLEAVLQVALSKLKVDDGHAE 424
E K E EA AL+ L V HAE
Sbjct: 1046 --------EAQKCENEEAETVSALASLSVGVKHAE 1072
>gi|353231603|emb|CCD78021.1| putative histone deacetylase 4, 5 [Schistosoma mansoni]
Length = 817
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 158/437 (36%), Positives = 226/437 (51%), Gaps = 71/437 (16%)
Query: 17 LLYDERMCKHN-TPDGDY-HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L YD M H+ T D HPENP R+ +IW +LQ G+ +C + A L VH
Sbjct: 246 LAYDLGMLAHHCTCQTDANHPENPQRLISIWQRLQQTGLAAKCHHQPGRRASLIELQLVH 305
Query: 75 TENHVNLI-KNISSK-QFDS------RRDRIAS-----KLNSIYLNEG-SSEAAYLAAGS 120
+ + L N +S+ + D R R+A ++ + G ++ AA LAAG
Sbjct: 306 KDVYTVLFGSNPASRCRIDPTLLATVRLCRLACGGVGVDSDTAWHTAGHTAHAARLAAGC 365
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA---ASFLLNERPELGI 177
V+++A RV G+ + FA+VRPPGHHAEP +AMGFC +N+VA+A A FL + G
Sbjct: 366 VVDLACRVMLGQCPNGFALVRPPGHHAEPGQAMGFCYFNSVAIAAKRAQFLGSTTLGTGQ 425
Query: 178 N---------------------------KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHR 210
+ +ILIVDWD+HHGN TQ +F+ DP VL+ S+HR
Sbjct: 426 SSVISSSATTLFDQSTFLPYTIESALKPRILIVDWDIHHGNGTQTVFYTDPTVLYISLHR 485
Query: 211 HEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC-GDADYLAVWDHILLPVAKDFGP 269
H+ G F+P G IG GPG GY IN+ W +G DA+YLA + I+LPVA +F P
Sbjct: 486 HDEGGFFPGT--GSPEEIGSGPGEGYTINIAWPSGIVMSDAEYLAAFRLIILPVACEFQP 543
Query: 270 DIIIISAGFDAAAGDP--LGGCRVTP--YGYSVMLKKLMDFAQGKIVLALEGGYNLGSIS 325
I++ISAGFDAA G LGG V+P +G+ L + A K+VL+LEGGY++ S+
Sbjct: 544 SIVLISAGFDAAPGHSANLGGYSVSPAAFGWMTRLLSIDRIANSKVVLSLEGGYDMNSLC 603
Query: 326 NSVLACMNVLLEDK-----------------PVAGSS-EAYPFESTWRVIQAVRKKLSAF 367
+ AC+ LL P+ S + P S + + V S +
Sbjct: 604 DCTEACVRALLRSAAEINERNSIPISVPDLIPLKQSELDRVPHPSAIQTLLKVAHLHSVY 663
Query: 368 WPTLADELPTKLTSLKA 384
W + ++E+ T+ S+ A
Sbjct: 664 WTSFSNEIGTQYASMPA 680
>gi|67902110|ref|XP_681311.1| hypothetical protein AN8042.2 [Aspergillus nidulans FGSC A4]
gi|40740474|gb|EAA59664.1| hypothetical protein AN8042.2 [Aspergillus nidulans FGSC A4]
Length = 744
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 197/369 (53%), Gaps = 38/369 (10%)
Query: 16 GLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAGI-----PQRCVV------LNA 62
GL YD +M H P D HPE+P RI I+ +L AG+ R +V ++A
Sbjct: 126 GLCYDVQMRYHCEVRPTSDVHPEDPRRIYYIYKELCRAGLVDDIESTRPLVARPLKRIHA 185
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
+ A ++ + VHT H +++ + D + +SIY N + ++ L+ G I
Sbjct: 186 RNATEEEISLVHTAAHYAFVES-TKDMSDEELIALEHTRDSIYFNNLTFASSLLSVGGAI 244
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
E VA ++ +A A++RPPGHHAE D+ MGFCL+NNV + E ++
Sbjct: 245 ETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVQLK---------ETNHSR--- 292
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
DVHHGN QK F+ DP VL+ S+H ++ G+FYP DG G G G G
Sbjct: 293 ---DVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEG------- 342
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
N GD DY+ + +++P+A++F PD++II++GFDAAAGD LGGC VTP Y+ M
Sbjct: 343 -NQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGFDAAAGDTLGGCFVTPACYAHMTHM 401
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
LM AQGK+ + LEGGYN SIS S LA L+ + P S P E+ I+ V
Sbjct: 402 LMTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMGNPPDRLSFTC-PSEAAISTIRRVSS 460
Query: 363 KLSAFWPTL 371
S +W +
Sbjct: 461 IQSDYWKCM 469
>gi|303286477|ref|XP_003062528.1| histone deacetylase [Micromonas pusilla CCMP1545]
gi|226456045|gb|EEH53347.1| histone deacetylase [Micromonas pusilla CCMP1545]
Length = 303
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 180/291 (61%), Gaps = 10/291 (3%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
H E P R A+ K G+ RC + A+ A D LL H+++H++ + + FD+
Sbjct: 10 HFERPARHAAVVAKFFKEGLEGRCERVPARLATDDELLLCHSQSHLDAVDST----FDAS 65
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
+D IY ++ A AAGS VA VA G ++ FA+VRPPGHHAE AM
Sbjct: 66 KDEAVQGEGDIYWTTHTARCARTAAGSAAAVAAAVAAGSIHRGFAVVRPPGHHAECARAM 125
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFC YNN A+AA L + G+ ++L++DWDVHHGN Q + + DP+V++ S+HRH
Sbjct: 126 GFCFYNNAAIAARVALRQP---GVERVLVLDWDVHHGNGIQDVLYDDPKVMYASLHRHGN 182
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
G FYP D I EG +GYN+N+PW GDADYLA +D ++ P+A+ F PD+++
Sbjct: 183 G-FYPGTGDIDECGIREG--VGYNVNIPWAEKGLGDADYLAAFDLVIDPIARAFNPDVVV 239
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSI 324
++AGFDAA GDPLGG +V+ GY++M ++L+ A+G+ V ALEGGY L +
Sbjct: 240 VAAGFDAAEGDPLGGMKVSDQGYALMTERLLAHAKGRCVCALEGGYGLRRV 290
>gi|403306388|ref|XP_003943719.1| PREDICTED: histone deacetylase 5 [Saimiri boliviensis boliviensis]
Length = 1067
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 128/331 (38%), Positives = 196/331 (59%), Gaps = 45/331 (13%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 674 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQA 733
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
VH+E H L ++ ++ DS++ L E LA G
Sbjct: 734 VHSEYHTLLYGTSPLNRQKLDSKK----------LLGE-------LACGW---------- 766
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
+ FAI+RPPGHHAE AMGFC +N+VA+ A L + +L + K+LIVDWD+HHG
Sbjct: 767 ----NGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKLNVGKVLIVDWDIHHG 819
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG---RC 247
N TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+GYN+NV W G
Sbjct: 820 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 877
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGYSVMLKKLMD 305
GD +YL + +++P+A +F PD++++SAGFDA G PLGG VT + + ++LM
Sbjct: 878 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 937
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
A+G++VLALEGG++L +I ++ AC++ LL
Sbjct: 938 LAEGRVVLALEGGHDLTAICDASEACVSALL 968
>gi|308805783|ref|XP_003080203.1| histone deacetylase HDA110 isoform 2 (ISS) [Ostreococcus tauri]
gi|116058663|emb|CAL54370.1| histone deacetylase HDA110 isoform 2 (ISS) [Ostreococcus tauri]
Length = 487
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 202/360 (56%), Gaps = 28/360 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
RVGL D RM H + D H E P R + + N+++A G+ RC L +EA + L
Sbjct: 103 RVGLASDARMELH---EKDGHFERPARHRVVVNEMRADGLESRCERLRCREATVEELERA 159
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKL--NSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H++ HV + + + +S + + + I+ ++ A +AAGSV E V G
Sbjct: 160 HSKEHVAFVASAFDEDGESVQIMTGENVFGDDIFFTRHTAAGARMAAGSVSEACLSVCRG 219
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+++ A+A+VRPPGHHA +AMGFC +NN VAA + E + + K++I+DWDVHHGN
Sbjct: 220 DVDRAYAVVRPPGHHAVCAQAMGFCFFNNAVVAARAAMAEHAD--VKKVVILDWDVHHGN 277
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
Q + + D +++ S+HR+ FYP G + +G G N+NV W+ GDAD
Sbjct: 278 GIQDLTFDDDSIMYVSLHRYG-DDFYPGT--GAASEVG---AKGTNVNVAWKEKGLGDAD 331
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA +D ++ P + F PD+III+AGFDAA GDPLGG ++P GY M K+L + G++
Sbjct: 332 YLAAFDIVIEPCVRAFAPDLIIIAAGFDAADGDPLGGMMLSPAGYQHMTKRLCNIGTGRV 391
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
V+ALEGGY L E P+ S+ + P +S+ ++ + + L+ WP L
Sbjct: 392 VVALEGGYAL-------------RYEPTPI--STRSRPRKSSIKLCKELVGILAEHWPVL 436
>gi|340502449|gb|EGR29138.1| hypothetical protein IMG5_162410 [Ichthyophthirius multifiliis]
Length = 647
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 211/374 (56%), Gaps = 24/374 (6%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQR--CVVLNAKEAKDKNL 70
++ G+LYD KHN+ H E P R+++I++ L + Q+ ++N + +
Sbjct: 24 QKTGILYDLDQLKHNSSRQ--HVECPGRLQSIYDHLNKKQLLQKPNIELVNKLHPGLREI 81
Query: 71 LS-VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+ VH +++++ I + ++ + I Y N+ S+ AYL G++ + +++
Sbjct: 82 IQYVHNDDYIDFIDQMWPEKTSKKEIYIID----TYFNKDSAYCAYLGVGAIQQSIDKIE 137
Query: 130 EGELNSAFAIVRPPGHHA-EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
+ +AF I+RPPGHH+ + GFC +NNVA+AA ++ + + KILI DWD+H
Sbjct: 138 NNDWKNAFCIIRPPGHHSGYSNVCTGFCFFNNVAIAAKYI---QKKYNKKKILIFDWDIH 194
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG--- 245
HG+ TQ +F DP V+ S HR++ G FYP++ G + +GEG G GY INV W G
Sbjct: 195 HGDGTQIIFKDDPSVMLISFHRYDEGMFYPSS--GSPSNVGEGKGEGYKINVGWNIGHKE 252
Query: 246 ---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
+ G +Y+ ++ I P+ ++F PD +I+SAGFD+A GDPLG C V+ GY+ M ++
Sbjct: 253 YSLKAGTDEYIYAFERIAWPIIQEFEPDFVIVSAGFDSAEGDPLGQCSVSYEGYAYMTQR 312
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL-EDKPVAGSS--EAYPFESTWRVIQA 359
LM QGKI++ LEGGYNL SI + + + VL+ ED + + P + +++
Sbjct: 313 LMQINQGKILVVLEGGYNLDSICWASESVLRVLIGEDFSYLDNKKDQICPNFVGFSAVES 372
Query: 360 VRKKLSAFWPTLAD 373
+ L +W L+D
Sbjct: 373 AFQNLKKYWINLSD 386
>gi|444911854|ref|ZP_21232025.1| Acetylspermidine deacetylase [Cystobacter fuscus DSM 2262]
gi|444717630|gb|ELW58456.1| Acetylspermidine deacetylase [Cystobacter fuscus DSM 2262]
Length = 343
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 197/363 (54%), Gaps = 35/363 (9%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
LL D +H+ G HPE P R++ I + L++ IP + + A D+ L +VH+
Sbjct: 6 LLTDALFLQHDP--GPEHPECPARLERILSLLESQPIPG-TERRSPRPATDEELAAVHSP 62
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
+ ++ + K D ++ S +AA LAAG+ ++ E V G +A
Sbjct: 63 RLLEALRGLRGKSTSLDPD--------TAMSPDSYDAAVLAAGASVQAVEEVMAGRARNA 114
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
FA+VRPPGHHAEP++AMGFCL NN A+AA LG ++LI DWDVHHGN TQ
Sbjct: 115 FALVRPPGHHAEPEQAMGFCLLNNAAIAAEAARR----LGAQRVLIFDWDVHHGNGTQAA 170
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
FWK VL+ S H+ +YP G T IGEG GLGY +N G DADY A+
Sbjct: 171 FWKRRDVLYMSAHQF---PYYPGT--GAPTEIGEGEGLGYTVNCGVPGG-SNDADYGALC 224
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM----DFAQGKIV 312
+ + LPVA+ F PD++IISAGFDA DP+GG VT G++ M D+ G++V
Sbjct: 225 ERLFLPVARAFRPDLVIISAGFDAHREDPIGGMVVTERGFAAMCTAFQQLARDYCGGRLV 284
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWR----VIQAVRKKLSAFW 368
L LEGGY+L +S SV AC+ V+ AG E + E R ++ R+ L W
Sbjct: 285 LLLEGGYSLEGLSRSVHACVEVM------AGRREEHFVEGLSRDAADALRRSREALQPHW 338
Query: 369 PTL 371
P L
Sbjct: 339 PVL 341
>gi|47847402|dbj|BAD21373.1| mFLJ00062 protein [Mus musculus]
Length = 852
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/275 (44%), Positives = 177/275 (64%), Gaps = 13/275 (4%)
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
++I+ SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+V
Sbjct: 527 DTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSV 586
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND 221
A+A L +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P +
Sbjct: 587 AIACRQLQQHG---KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS- 642
Query: 222 DGFYTMIGEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
G +G G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGF
Sbjct: 643 -GAVDEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGF 701
Query: 279 DAAAGD--PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
DAA G PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL
Sbjct: 702 DAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALL 761
Query: 337 EDKPVAGSSEAY---PFESTWRVIQAVRKKLSAFW 368
+K S E++ P S R ++AV + +W
Sbjct: 762 GNKVDPLSEESWKQKPNLSAIRSLEAVVRVHRKYW 796
>gi|224121378|ref|XP_002318567.1| hypothetical protein POPTRDRAFT_421550 [Populus trichocarpa]
gi|222859240|gb|EEE96787.1| hypothetical protein POPTRDRAFT_421550 [Populus trichocarpa]
Length = 503
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 191/359 (53%), Gaps = 20/359 (5%)
Query: 19 YDERMCKHNTPDGDYHP--ENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
+DERM H+ HP E +R++AI L A +VL NL ++
Sbjct: 108 FDERMLLHSEVQMKSHPHPERSDRLRAIAASLATADC---LIVLAFPLLSISNLTTITNV 164
Query: 77 NHV---NLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
V ++ N + + R Y NE S+ AA LAAG ++A + G +
Sbjct: 165 CRVISWKMLPNFCKRDYPRRTSNGDYFTPDTYANEHSACAARLAAGLCADLASTIFSGRV 224
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ FA+VRPPGHHA EAMGFCL+NN AVAA + K+LIVDWDVHHGN T
Sbjct: 225 KNGFAMVRPPGHHAGVREAMGFCLHNNAAVAALAAQAAGAK----KVLIVDWDVHHGNGT 280
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q++F ++ VL+ S+HRHE G FYP G +G G +N+PW G GD DY+
Sbjct: 281 QEIFDQNKSVLYISLHRHEGGKFYPGT--GSANEVGRNGAEGSCVNIPWSRGGVGDNDYI 338
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
+ +++LP+ D IISAGFDAA GDPLG C VTP GYS M L GK+++
Sbjct: 339 FAFQNLVLPI------DFTIISAGFDAARGDPLGCCDVTPAGYSRMTDMLYTLTGGKLLV 392
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGYNL SIS+S + + VLL + P + P + + + V K FWP+L
Sbjct: 393 ILEGGYNLRSISSSATSVIKVLLGEGPGSELGNIAPSRAGLQTVLEVMKIQMNFWPSLG 451
>gi|21755157|dbj|BAC04630.1| unnamed protein product [Homo sapiens]
Length = 314
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 161/234 (68%), Gaps = 12/234 (5%)
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A +VA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 1 MAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 57
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 58 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 115
Query: 236 YNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + I+ PVAK+F PD++++SAGFDA G PLGG +
Sbjct: 116 YNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYK 175
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G++VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 176 VTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLA 229
>gi|339238167|ref|XP_003380638.1| histone deacetylase family protein [Trichinella spiralis]
gi|316976487|gb|EFV59780.1| histone deacetylase family protein [Trichinella spiralis]
Length = 900
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/323 (38%), Positives = 188/323 (58%), Gaps = 4/323 (1%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
G + D RM H H E P R+ +I + G+ R + ++ A + H+
Sbjct: 42 GYVTDRRMLLHRNIWFPNHIETPERLSSILDLCDQQGLFDRMKKIPSRLASLDEIELFHS 101
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+++V + + S + + + +S +S+Y + S AA LA GS++ E V +
Sbjct: 102 KDYVQQVASFESMGAEELQ-KASSTYDSVYACQHSFTAARLAVGSLLNATEAVLMKRCVN 160
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
A A+VRPPGHHA D A GFCL+NNV +AA+ LN +++ILIVDWDVH+G Q+
Sbjct: 161 AIALVRPPGHHAMLDAANGFCLFNNVGIAAAHALNA---FRLDRILIVDWDVHYGQGIQQ 217
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
F ++L S+HRHEFG+F+P + + +G+ GLG+N+NVP GDADYLA+
Sbjct: 218 KFINSKQILCVSIHRHEFGSFWPHMPESDWNNVGQDDGLGFNVNVPLNVRGLGDADYLAI 277
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLAL 315
+ HILLP+A +F P +I++SAGFDAA G P G ++P ++ K L A G++V++L
Sbjct: 278 FHHILLPLAIEFQPQLILVSAGFDAAVGCPEGEMLLSPRIFAHFTKMLASVAAGRLVISL 337
Query: 316 EGGYNLGSISNSVLACMNVLLED 338
EGGY + S+S SV + LL D
Sbjct: 338 EGGYCIPSLSWSVSCVVRALLND 360
>gi|52352410|gb|AAU43699.1| acetoin utilization protein [uncultured archaeon GZfos26D8]
Length = 351
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 195/357 (54%), Gaps = 32/357 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +Y KH+T HPE R++AI KL+ GI ++ + +A + L VH
Sbjct: 7 TGFVYHADYLKHDT---GVHPETAERLRAIIRKLEETGIAEKLRRIVPTKASKEQLRYVH 63
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAE--G 131
++ K+ ++ R L+ L + E A LAAG VI+ + V +
Sbjct: 64 APEYI--------KEVEAMCRRGGGALDPDTPLCADTYEIALLAAGGVIKAVDEVMDESN 115
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
L FA++RPPGHHA P++ MGFC++NN+A+AA L + E GIN++LI DWDVHHGN
Sbjct: 116 SLKHVFALIRPPGHHATPNKGMGFCIFNNIAIAAEHL---KREYGINRVLIADWDVHHGN 172
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ+MF+ D VL+FS H++ YP G+ +G G G G+ +N P G D
Sbjct: 173 GTQRMFFDDASVLYFSTHQY---PHYPGT--GWIDEVGTGEGEGFTVNAPLPAG-TDDDS 226
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ--- 308
YL +IL+P+A +F PD +++S GFDA A DPL VT G+ + D A+
Sbjct: 227 YLYALSNILVPIAMEFRPDFVLVSVGFDAHAADPLASMNVTSRGFGRFTSLIKDIAEKNS 286
Query: 309 -GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKL 364
G+IV+ALEGGYNL +I+ S L+ N LL D+ SE ES R + VR ++
Sbjct: 287 HGRIVMALEGGYNLNAIAESALSVFNSLLSDE-----SELRVKESEIRASEQVRIRV 338
>gi|11994115|dbj|BAB01118.1| unnamed protein product [Arabidopsis thaliana]
Length = 577
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 210/387 (54%), Gaps = 38/387 (9%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN------L 70
+DERM H+ + HPE P+R++AI L AG+ R + LN + K +
Sbjct: 154 FDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGM-LRLLPLNLASLEKKTNVWKLII 212
Query: 71 LSVHTENHVNLIKNIS-------SKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVI 122
+ + + +L + S Q SR S Y NE S+ AA LAAG
Sbjct: 213 IKIWRSLYRSLAAEVFFLEDACLSMQGKSRNKNSRCYFTSDTYANEYSARAARLAAGLCA 272
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
++A + G + + FA+VRPPGHHA AMGFCL+NN AVAA + K+LI
Sbjct: 273 DLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAK----KVLI 328
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
VDWDVHHGN TQ++F ++ VL+ S+HRHE G FYP G +G G GY +NVPW
Sbjct: 329 VDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGT--GAADEVGSNGGEGYCVNVPW 386
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKK 302
G GD DY+ + H++LP+ D +IISAGFDAA GDPLG C VTP GYS M +
Sbjct: 387 SCGGVGDKDYIFAFQHVVLPI------DFVIISAGFDAARGDPLGCCDVTPAGYSRMTQM 440
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRV--IQAV 360
L D GK+++ LEGGYNL SIS S A + VLL + P P +T V +Q V
Sbjct: 441 LGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENP----ENELPIATTPSVAGLQTV 496
Query: 361 RKKLSA---FWPTLADELPTKLTSLKA 384
L+ FWP+LA L+ L+A
Sbjct: 497 LDVLNIQLEFWPSLAISYSKLLSELEA 523
>gi|118594918|ref|ZP_01552265.1| histone deacetylase family protein [Methylophilales bacterium
HTCC2181]
gi|118440696|gb|EAV47323.1| histone deacetylase family protein [Methylophilales bacterium
HTCC2181]
Length = 346
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 201/336 (59%), Gaps = 22/336 (6%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVL-NAKEAKDKN 69
+++++ +LYD+RM H+T G HPE P RI++ + ++ + + ++ + KE D
Sbjct: 25 VEKKIAVLYDKRMLAHDTGIG--HPETPRRIESAYTAIKNDKLLTKHLIWPSIKEVSDTT 82
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNS--IYLNEGSSEAAYLAAGSVIEVAER 127
L VHT+ +++ I +K+ + + + L++ + ++ S AA +A GSVIE +
Sbjct: 83 LQLVHTKKYIDQI----AKEISTLKATETAYLSTGDVVISRNSDMAARVAVGSVIEGVNQ 138
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ +SAFA+VRPPGHHA D+ MGFC+YNN+A+AA +L + + G+ +ILIVD+DV
Sbjct: 139 IMTNVASSAFALVRPPGHHASSDKGMGFCIYNNIAIAARYL---QQQFGLERILIVDFDV 195
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ +F++DP V +FSVH+H YP G IG G G GY +NV G
Sbjct: 196 HHGNGTQDIFYEDPSVFYFSVHQHP---LYPGT--GSPQEIGSGKGEGYTLNVELPRG-S 249
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF- 306
D D + ++ L+ K + P+ I++SAGFD DPLG +P GY + K L +
Sbjct: 250 NDRDLVNAFNDRLVSAMKKYKPEFILVSAGFDGHHNDPLGELSYSPRGYQGVAKVLSNLS 309
Query: 307 ---AQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
A+ KI+ +EGGY+ ++S S+LA ++VL +D+
Sbjct: 310 REHAKEKIMYVVEGGYSYDNMSQSILAILHVLEKDR 345
>gi|432871974|ref|XP_004072054.1| PREDICTED: histone deacetylase 5-like [Oryzias latipes]
Length = 1138
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/374 (34%), Positives = 202/374 (54%), Gaps = 51/374 (13%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G+ HPE+ R+++IW++LQ G+ RC + ++A + S
Sbjct: 659 TGLVYDSLMLKHQCVCGNAHIHPEHAGRVQSIWSRLQETGLLGRCERIRGRKASLDEIQS 718
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
VH+E H L ++ + D ++ I+ K+ ++ E S
Sbjct: 719 VHSEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPWEASGXXXXXXXX--------- 769
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
HHAE AMGFC +N+VA+AA L + +LG+ KILIVDWD+H
Sbjct: 770 ----------------HHAEESTAMGFCFFNSVAIAAKLL---QQKLGVGKILIVDWDIH 810
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG--- 245
HGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G G G+G+N+N+ W G
Sbjct: 811 HGNGTQQAFYTDPSVLYISLHRYDDGNFFPGS--GAPEEVGSGAGVGFNVNIAWTGGVEP 868
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGYSVMLKKL 303
GD +YL + +++P+A+ F PD++++SAGFDA G PLGG V+ + + + L
Sbjct: 869 PMGDVEYLVAFRSVVMPIAQRFSPDVVLVSAGFDAVEGHQSPLGGYNVSAKCFGQLTQLL 928
Query: 304 MDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFE--------STWR 355
M A G++V+ALEGG++L +I ++ AC++ LL D + S+ +P + S R
Sbjct: 929 MGLAGGRVVMALEGGHDLTAICDASEACVSALLGD--LCDSTFQWPLDNPCPKACASLER 986
Query: 356 VIQAVRKKLSAFWP 369
VI+ K S P
Sbjct: 987 VIEIQSKHWSCLQP 1000
>gi|223994141|ref|XP_002286754.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978069|gb|EED96395.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 228
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 155/232 (66%), Gaps = 4/232 (1%)
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y S A AA S+ ++ V G+L+S FA++RPPGHHAEP A G+C+ NNVAVA
Sbjct: 1 YFTPDSVREAKAAASSLCKLVSNVVSGDLDSGFAVIRPPGHHAEPGLAGGYCVINNVAVA 60
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGF 224
AS+ + +LG+ K+LIVDWDVHHGN TQK F+ +P V++FS HR+ G F+P G
Sbjct: 61 ASY---AQEQLGVKKVLIVDWDVHHGNGTQKCFFDNPNVMYFSAHRYHGGNFFPFLQQGG 117
Query: 225 YTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284
+ +G G G G+N+NV W + + GD +YL VW+ +L+PVA +F PD++I+SAGFDAA GD
Sbjct: 118 PSSVGNGAGRGFNMNVGWNDKKMGDDEYLVVWEKLLMPVANEFNPDLVIVSAGFDAAHGD 177
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
+G C +TP ++ + ++L A GK+V ALEGGY + + + ++ LL
Sbjct: 178 -MGECDITPECFARLTRRLKTLANGKVVCALEGGYVRSVLCKCIESVLSSLL 228
>gi|327358297|gb|EGE87147.1| hypothetical protein BDDG_10099 [Ajellomyces dermatitidis ATCC
18188]
Length = 233
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 145/215 (67%), Gaps = 1/215 (0%)
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
+SIY N + ++ L+ G IE + V G++ +A A++RPPGHHAE ++ MGFCL+NNV
Sbjct: 14 DSIYFNSLTFTSSILSCGGAIETCKAVVSGQVKNAIAVIRPPGHHAEQNKTMGFCLFNNV 73
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND 221
VAA E E KILI+DWDVHHGN QK F+ DP +L+ S+H + G+FYP +
Sbjct: 74 CVAARVCQREFGE-KCRKILILDWDVHHGNGVQKAFYDDPNILYISLHVYRDGSFYPGGE 132
Query: 222 DGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAA 281
+G + GEG GLG NIN+PW GD DY+ + +++P+A +F PD++IISAGFDAA
Sbjct: 133 EGNWDHCGEGNGLGKNINIPWPTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAA 192
Query: 282 AGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALE 316
AGD LGGC VTP Y+ M + LM+ A GK+ + LE
Sbjct: 193 AGDELGGCFVTPPCYAHMTRMLMNVAGGKVAVCLE 227
>gi|426228318|ref|XP_004008259.1| PREDICTED: histone deacetylase 9-like [Ovis aries]
Length = 312
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 159/234 (67%), Gaps = 12/234 (5%)
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A RVA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 1 MAVGCVIELASRVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 57
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 58 NISKILIVDLDVHHGNGTQQAFYADPNILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 115
Query: 236 YNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
YNIN+ W G GD +YL + ++ PVA +F PD++++SAGFDA G PLGG +
Sbjct: 116 YNINIAWTGGLDPPMGDIEYLEAFRTVVKPVATEFDPDMVLVSAGFDALEGHAPPLGGYK 175
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--EDKPVA 342
VT + + K+LM A G +VLALEGG++L +I ++ AC+N LL E +P+A
Sbjct: 176 VTAKCFGHLTKQLMTLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLA 229
>gi|156843041|ref|XP_001644590.1| hypothetical protein Kpol_1003p37 [Vanderwaltozyma polyspora DSM
70294]
gi|156115236|gb|EDO16732.1| hypothetical protein Kpol_1003p37 [Vanderwaltozyma polyspora DSM
70294]
Length = 349
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 171/284 (60%), Gaps = 24/284 (8%)
Query: 14 RVGLLYDERMCKH------NTPDGDYHPENPNRIKAIWNKLQAAG------------IPQ 55
+ GL YD RM H N D HPE+P R+ I+ L G I
Sbjct: 70 KTGLCYDVRMRYHAKIFTSNFEYIDPHPEDPRRVYRIYKILAENGLIKDENLSGLDDIGD 129
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRD--RIASKLNSIYLNEGSSEA 113
+ + + A ++ +L+VHT H++ I+NI S+ SR + ++ K +S+Y N S +
Sbjct: 130 IMLKIPVRTATEEEILAVHTREHLDFIENIESQ---SREELIKLTEKADSVYYNNDSYYS 186
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A L+ G VIE V EG + ++ AIVRPPGHHAEP A GFCL++NV+VAA +L P
Sbjct: 187 AKLSCGGVIEACRAVVEGRVKNSLAIVRPPGHHAEPQAAGGFCLFSNVSVAARSILRTYP 246
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + KILI+DWD+HHGN TQK F++D VL+ S+HR+E FYP G Y +GEG G
Sbjct: 247 E-SVRKILILDWDIHHGNGTQKAFYEDENVLYISLHRYESTAFYPGTIHGRYDQVGEGKG 305
Query: 234 LGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAG 277
G+N N+ W G GDA+Y+ ++H+++P+ ++F PD++I+S+G
Sbjct: 306 EGFNCNITWPVGGVGDAEYMWAFEHVVMPLGREFRPDLVIVSSG 349
>gi|52548847|gb|AAU82696.1| acetoin utilization protein [uncultured archaeon GZfos19A5]
Length = 351
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 194/356 (54%), Gaps = 30/356 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +Y KH+T HPE R++ I KL+ GI ++ + +A + L SVH
Sbjct: 7 TGFVYHADYLKHDT---GVHPETAERLRVIIRKLEETGIAEKLRRIVPTKASKEQLRSVH 63
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE--GE 132
++ ++ I RR A ++ L + E A LAAG V + + V +
Sbjct: 64 APEYIKEVEAIC------RRGGGALDPDTP-LCADTYEIAMLAAGGVTKAVDEVMDESNS 116
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
L FA++RPPGHHA P++ MGFC++NN+A+AA L + E GIN++LI DWDVHHGN
Sbjct: 117 LKHVFALIRPPGHHATPNKGMGFCIFNNIAIAAEHL---KREYGINRVLIADWDVHHGNG 173
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F+ D VL+FS H++ YP G+ +G G G G+ +N P G D Y
Sbjct: 174 TQEVFFDDASVLYFSTHQY---PHYPGT--GWIDEVGTGEGEGFTVNAPLPAG-TDDDSY 227
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
L +IL+P+A +F PD +++S GFDA A DPL VT G+ L D A
Sbjct: 228 LYALSNILVPIAMEFRPDFVLVSVGFDAHAADPLASMNVTSRGFGRFTSLLKDIAGKNSH 287
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKL 364
G+IV+ALEGGYNL +I+ S L+ N LL D+ SE ES R + VR ++
Sbjct: 288 GRIVMALEGGYNLNAIAESALSVFNSLLSDE-----SELRVKESEIRASERVRIRV 338
>gi|52549274|gb|AAU83123.1| acetoin utilization protein [uncultured archaeon GZfos26F9]
Length = 351
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 195/356 (54%), Gaps = 30/356 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +Y E KH+T HPE R++AI KL+ GI ++ + +A + L VH
Sbjct: 7 TGFVYHEDYLKHDT---GVHPETAERLRAIIRKLEETGIAEKLRRIIPTKASKEQLRYVH 63
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE--GE 132
++ ++ + RR A ++ L E + E A LA G V + + V +
Sbjct: 64 APEYIEEVEAMC------RRGGGALDPDTP-LCEATYEIALLATGGVTKAGDEVMDESNS 116
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
L FA++RPPGHHA P++ MGFC++NN+A+A L + E GIN++LI DWDVHHGN
Sbjct: 117 LKHVFALIRPPGHHATPNKGMGFCIFNNIAIATEHL---KREYGINRVLIADWDVHHGNG 173
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ+MF+ VL+FS H++ YP G+ +G+G G G+ +NVP G D Y
Sbjct: 174 TQRMFFDGASVLYFSTHQY---PHYPGT--GWIDEVGKGEGEGFTVNVPLPAG-TDDDGY 227
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
L ++IL+P+A +F PD +++S GFDA A DPL VT G+ + D A
Sbjct: 228 LYALNNILVPIAMEFSPDFVLVSIGFDAHAADPLASMNVTSRGFGRFKSLIKDIAGKNSH 287
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKL 364
G+IV+ALEGGYNL +I+ S L+ N LL D+ SE ES R VR ++
Sbjct: 288 GRIVMALEGGYNLNAIAESALSVFNSLLSDE-----SELKVKESEIRASARVRIRV 338
>gi|147678368|ref|YP_001212583.1| deacetylases [Pelotomaculum thermopropionicum SI]
gi|146274465|dbj|BAF60214.1| deacetylases [Pelotomaculum thermopropionicum SI]
Length = 355
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 183/328 (55%), Gaps = 22/328 (6%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
I R GL+YD H T PE+P R+K + L+ AG+ ++ V + + A + +
Sbjct: 7 IGLRTGLIYDAAYLDHETHGC---PESPARVKHTYEILKIAGMLEKLVTIKPRPATVEEV 63
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
VH ++ +K S + S + + E A LAAG + E V E
Sbjct: 64 SLVHLPAYIERVKEFSKRGGGSFGNNTTGSPETF-------ETALLAAGGTLSAVEAVLE 116
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + SAFA+VRPPGHHA P +AMG+C +NN A+AA + + G++++LI+DWD HHG
Sbjct: 117 GRVESAFALVRPPGHHARPGQAMGYCFFNNAAIAARYAIK---RYGLSRVLIIDWDEHHG 173
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N T+++F+ DP VL+FSVHR YP G G+G G G+NINVP R GDA
Sbjct: 174 NGTEEIFYSDPSVLYFSVHRD---WSYPGT--GQAAKAGDGEGKGFNINVPLPK-RSGDA 227
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ-- 308
DY V+ IL PVA + P ++++SAGFDA D +G +TPYGY + + + A
Sbjct: 228 DYEHVFRRILRPVALAYRPQLVLVSAGFDAHRDDLIGQMSLTPYGYMALTGIVCEIATCC 287
Query: 309 -GKIVLALEGGYNLGSISNSVLACMNVL 335
G + LEGGYN G+++ SV A ++ +
Sbjct: 288 GGALAAVLEGGYNPGALAESVFAVLHTM 315
>gi|355694224|gb|AER99598.1| histone deacetylase 10 [Mustela putorius furo]
Length = 546
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 171/287 (59%), Gaps = 3/287 (1%)
Query: 97 IASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFC 156
++ + +++Y + + A LAAG+ +++ + V G ++ A+VRPPGHH++ A GFC
Sbjct: 20 LSGQYDAVYFHPSTFHCARLAAGAALQLVDAVLTGTAHNGLALVRPPGHHSQRAAANGFC 79
Query: 157 LYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF 216
++NNVA+AA + G+++ILIVDWDVHHG Q +F DP VL+FS HR+E G F
Sbjct: 80 VFNNVAIAARYAQKRH---GVHRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGRF 136
Query: 217 YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISA 276
+P + +G GPG G+ +N+PW G+ADY+A + H+LLPVA +F P+++++SA
Sbjct: 137 WPYLRESDADAVGLGPGRGFTVNLPWNQVGMGNADYMAAFLHVLLPVAFEFDPELVLVSA 196
Query: 277 GFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
GFD+A GDP G + TP ++ + + L A G++ LEGGY+L S+S SV + LL
Sbjct: 197 GFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMVVKALL 256
Query: 337 EDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLK 383
D P S IQ+VR + W +L + T SL
Sbjct: 257 GDPAPPLLGPMVPQHSALESIQSVRAAQAPHWTSLWQQGSTPTLSLS 303
>gi|395532778|ref|XP_003775353.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 5 [Sarcophilus
harrisii]
Length = 991
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 186/302 (61%), Gaps = 29/302 (9%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G++YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 680 TGVVYDTFMLKHQCMCGNTHIHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQT 739
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKLNSIYLNEG-------------SSEAAY 115
VH+E+H L ++ ++ DS++ I+ K+ ++ G SS A
Sbjct: 740 VHSEHHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR 799
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L + +L
Sbjct: 800 MAVGCLVELAFKVASGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL---QQKL 856
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+ K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G GPG+G
Sbjct: 857 SVGKVLIVDWDIHHGNGTQQAFYSDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVG 914
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCR 290
YN+NV W G GD +YL + +++P+A++F PD++++SAGFDA G PLGG
Sbjct: 915 YNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFCPDVVLVSAGFDAVEGHLSPLGGYS 974
Query: 291 VT 292
VT
Sbjct: 975 VT 976
>gi|337287253|ref|YP_004626726.1| histone deacetylase superfamily [Thermodesulfatator indicus DSM
15286]
gi|335360081|gb|AEH45762.1| histone deacetylase superfamily [Thermodesulfatator indicus DSM
15286]
Length = 347
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 139/364 (38%), Positives = 201/364 (55%), Gaps = 25/364 (6%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
+ ++ DE KHN G+YHPE P R++ I+++L+ I +L +EA + L H
Sbjct: 3 IAIVKDEIFLKHNP--GEYHPERPERLEKIYSRLEKPDINNLYKILAPREATFEELTWNH 60
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V ++ S + D S S EAA A G+ + + +
Sbjct: 61 SPEYVKTVQQTSGQSVQLDADTATSP--------ESYEAAIKAVGAQFVGLDAIFSDQAK 112
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
FA+VRPPGHHAE D AMGFCL+NNVA+AA + L + LG+ +ILIVDWD+HHGN TQ
Sbjct: 113 QVFALVRPPGHHAEYDRAMGFCLFNNVALAAHYALKK---LGLKRILIVDWDLHHGNGTQ 169
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
K F+ VLFFS H++ +YP G IGEG G G+ +NVP G CGD +Y
Sbjct: 170 KSFYHHREVLFFSSHQY---PYYPGT--GTVEEIGEGEGKGFTVNVPLPAG-CGDLEYAT 223
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGK 310
V+ ILLP+A+ F P+++++SAGFD GDPLGG +VTP G + + + + A G+
Sbjct: 224 VYRQILLPIAERFKPELVLVSAGFDIYFGDPLGGMQVTPIGVAYLARLVKQIADKHCNGR 283
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDK--PVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
++L LEGGY+L +++S+ A + L P E + V+ V+ FW
Sbjct: 284 LLLTLEGGYSLQGLADSLAAVLFELAGRSLIPTDKLEEMEEKDREPEVLNYVKAVHKDFW 343
Query: 369 PTLA 372
P LA
Sbjct: 344 PELA 347
>gi|302845066|ref|XP_002954072.1| hypothetical protein VOLCADRAFT_31841 [Volvox carteri f.
nagariensis]
gi|300260571|gb|EFJ44789.1| hypothetical protein VOLCADRAFT_31841 [Volvox carteri f.
nagariensis]
Length = 230
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 150/236 (63%), Gaps = 8/236 (3%)
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
Y N ++ A LAAGS EVA RV G AI+RPPGHHAE AMGFC YNN AVA
Sbjct: 3 YFNPSTAACARLAAGSAAEVARRVVSGSARHGAAIIRPPGHHAESSVAMGFCYYNNAAVA 62
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGF 224
A + ++LI+DWDVHHGN TQ++F++DP V++ S HR++ G FYP G
Sbjct: 63 ARAAQAAGAK----RVLIMDWDVHHGNGTQEIFYEDPSVMYMSTHRYDNGNFYPGT--GG 116
Query: 225 YTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284
+ G GPGLG+ +NVPW DAD LA + H+++P+A +F PD++I+SAGFDAA GD
Sbjct: 117 ASETGSGPGLGFTVNVPWNGSGVRDADMLAAFRHVVVPLATEFRPDVVIVSAGFDAAEGD 176
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
PLGGCRV+ +S L A V+ LEGGYNL + + + AC+ VLL + P
Sbjct: 177 PLGGCRVSTAAFSHFAAMLSALA--PTVMLLEGGYNLIATAAATEACLRVLLGEPP 230
>gi|383825469|ref|ZP_09980618.1| histone deacetylase superfamily protein [Mycobacterium xenopi
RIVM700367]
gi|383334761|gb|EID13196.1| histone deacetylase superfamily protein [Mycobacterium xenopi
RIVM700367]
Length = 343
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 183/324 (56%), Gaps = 22/324 (6%)
Query: 22 RMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNL 81
R +H+ P HPE +RI+A+W L+ +G+ R L + +L+VHT +++++
Sbjct: 10 RYTEHDLPG---HPECADRIRAVWQGLRESGLDARMRPLEVQALDTDAVLAVHTADYLDM 66
Query: 82 IKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVR 141
++ I+ D Y + A L+AG VI + V G ++ A +R
Sbjct: 67 LRRINDTPRTIHLD------PDTYAGPDALTIARLSAGGVIAATDAVLGGAADNGLAAIR 120
Query: 142 PPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDP 201
PPGHHA PD AMGFCL NVA+AA N GI ++L+VD+DVHHGN T+ M + DP
Sbjct: 121 PPGHHAMPDRAMGFCLLGNVAIAARHAQN---RYGIQRVLVVDYDVHHGNGTEAMLYDDP 177
Query: 202 RVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILL 261
VL+ S H++ FYP G +G G G GY IN+P G GD++Y V+D I+
Sbjct: 178 SVLYISTHQYP---FYPGT--GAANDVGTGRGQGYTINIPLPAG-SGDSNYAMVFDQIVW 231
Query: 262 PVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEG 317
P A+ F P++I++S GFDA DPL R+T GYS + ++++ A+ GKIV ALEG
Sbjct: 232 PAAERFAPELILVSVGFDAYWADPLAAMRLTLNGYSRLAEEVIGMARRWCAGKIVFALEG 291
Query: 318 GYNLGSISNSVLACMNVLLEDKPV 341
GY+L ++ V +LL++ PV
Sbjct: 292 GYDLDALRYGVANVARLLLDEPPV 315
>gi|116753988|ref|YP_843106.1| histone deacetylase superfamily protein [Methanosaeta thermophila
PT]
gi|116665439|gb|ABK14466.1| histone deacetylase superfamily [Methanosaeta thermophila PT]
Length = 344
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/345 (38%), Positives = 196/345 (56%), Gaps = 31/345 (8%)
Query: 34 HPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDS 92
HPE R+ AI +++A G+ P R + + A + +VH+ ++ +++I
Sbjct: 25 HPERKERLIAIMERIEAEGLNPNR---IEPRPASLDKIEAVHSRRYIEQVRSIC------ 75
Query: 93 RRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDE 151
+R +L+ L++ S + A +AAG V + V + + + FA+VRPPGHHA P
Sbjct: 76 --ERGGGRLDIDTVLSKDSYDVALMAAGGVCAGVDHVMK-KPDPVFALVRPPGHHATPHR 132
Query: 152 AMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH 211
MGFC++NNVA+ A + + LG+ K+LIVDWDVHHGN TQ +F++D VL+FS H+H
Sbjct: 133 GMGFCVFNNVAIGARYAQS----LGLKKVLIVDWDVHHGNGTQAIFYEDNSVLYFSTHQH 188
Query: 212 EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
YP G T +G+G G G+ +NVP G D+ YLAV+ IL+PVA +F P+I
Sbjct: 189 ---PHYPGT--GRVTEVGDGKGKGFTVNVPLPPG-IDDSGYLAVYKEILVPVADEFRPEI 242
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSISNS 327
+ +SAGFD DPLGG R+T G+ + + D A G+IV ALEGGY L S+S S
Sbjct: 243 VFVSAGFDPHQMDPLGGMRLTENGFGALAGLVKDIADRHAGGRIVAALEGGYRLESLSES 302
Query: 328 VLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
V++ + + P + P R I+ VR A+W +LA
Sbjct: 303 VVSVLRAFQGEVPDVMPLKDAPLT---RRIEEVRSVQKAYWRSLA 344
>gi|28273132|dbj|BAC56929.1| FLJ00413 protein [Homo sapiens]
Length = 308
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/269 (44%), Positives = 175/269 (65%), Gaps = 13/269 (4%)
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
++I+ SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC +N+V
Sbjct: 9 DTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSV 68
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND 221
A+A L + +KILIVDWDVHHGN TQ+ F++DP VL+ S+HRH+ G F+P +
Sbjct: 69 AIACRQLQQQSKA---SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS- 124
Query: 222 DGFYTMIGEGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGF 278
G +G G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGF
Sbjct: 125 -GAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGF 183
Query: 279 DAAAGD--PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
DAA G PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL
Sbjct: 184 DAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALL 243
Query: 337 EDKPVAGSSEAY---PFESTWRVIQAVRK 362
++ S E + P + R ++AV +
Sbjct: 244 GNRVDPLSEEGWKQKPNLNAIRSLEAVIR 272
>gi|258571357|ref|XP_002544482.1| histone deacetylase clr3 [Uncinocarpus reesii 1704]
gi|237904752|gb|EEP79153.1| histone deacetylase clr3 [Uncinocarpus reesii 1704]
Length = 690
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 191/387 (49%), Gaps = 70/387 (18%)
Query: 15 VGLLYDERMCKHN--TPDGDYHPENPNRIKAIWNKLQAAG-----------IPQRCVVLN 61
G+ YD RM H P D HPE+P RI I+ +L AG + Q + +
Sbjct: 121 TGVCYDIRMRYHCEVKPTLDVHPEDPRRIYYIYKELCKAGLVDDPDASRPLVSQPLLRIP 180
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSV 121
A+ A + + +H H + +++ + G
Sbjct: 181 ARNATLEEISLIHDPEHYDFVRSTKT------------------------------CGGA 210
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
IE + V ++ +A A++RPPGHHAE +AMGFCL+NNV VAA N + KI+
Sbjct: 211 IETCKAVVSSKVKNAIAVIRPPGHHAEQCQAMGFCLFNNVCVAARVCQNTFGD-KCRKIM 269
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
IVD GN Q F+ DP VL+ S+H ++ G FYP + G + GEG GLG N+N+P
Sbjct: 270 IVDC---LGNGVQNAFYDDPNVLYVSIHVYKDGAFYPGGEQGNWDQCGEGVGLGKNVNIP 326
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDIII------------------ISAGFDAAAG 283
W GD DYL + +++P+ +F PD++I +SAGFDAAAG
Sbjct: 327 WPTQGMGDGDYLYAFQEVIMPIGYEFNPDLVISEFLQSCARSLPDFDEILVSAGFDAAAG 386
Query: 284 DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP--V 341
D LGGC VTP Y+ M LM+ A GK+ + LEGGYN SIS S LA L+ + P +
Sbjct: 387 DELGGCFVTPPCYAHMTSMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEPPDRL 446
Query: 342 AGSSEAYPFESTWRVIQAVRKKLSAFW 368
G+ + ST R + ++ K +W
Sbjct: 447 IGAGASNAGVSTVRQVAMIQSK---YW 470
>gi|355694239|gb|AER99603.1| histone deacetylase 7A isoform a [Mustela putorius furo]
Length = 290
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 175/274 (63%), Gaps = 13/274 (4%)
Query: 97 IASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFC 156
+ ++I+ SS AA AAGSV ++A +VA EL + FA+VRPPGHHA+ AMGFC
Sbjct: 20 VGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFC 79
Query: 157 LYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF 216
+N+VA+A L + +KILI+DWDVHHGN TQ+ F++DP VL+ S+HRH+ G F
Sbjct: 80 FFNSVAIACRQLQQQGKA---SKILIMDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNF 136
Query: 217 YPANDDGFYTMIGEGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIII 273
+P + G +G G G G+N+NV W G GD +YLA + +++P+A++F PD+++
Sbjct: 137 FPGS--GAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRMVVMPIAREFSPDLVL 194
Query: 274 ISAGFDAAAGD--PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLAC 331
+SAGFDAA G PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC
Sbjct: 195 VSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEAC 254
Query: 332 MNVLLEDKPVAGSSEAY---PFESTWRVIQAVRK 362
+ LL +K S E + P + R ++AV +
Sbjct: 255 VAALLGNKVDPLSEEGWKQKPNLNAIRSLEAVIR 288
>gi|148672426|gb|EDL04373.1| histone deacetylase 10, isoform CRA_b [Mus musculus]
Length = 478
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 180/303 (59%), Gaps = 17/303 (5%)
Query: 106 LNEGSSE---AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVA 162
L+ GS + A LAAG+ +++ + V G +++ A+VRPPGHH++ A GFC++NNVA
Sbjct: 34 LHSGSQDTFHCARLAAGAALQLVDAVLTGAVHNGLALVRPPGHHSQRAAANGFCVFNNVA 93
Query: 163 VAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD 222
+AA + + + G+ +ILIVDWDVHHG Q +F DP VL+FS HR+E G+F+P +
Sbjct: 94 LAAK---HAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPE 150
Query: 223 GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAA 282
+G+G G G+ +N+PW G+ADYLA + H+LLP+A +F P+++++SAGFD+A
Sbjct: 151 SDADAVGQGQGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAI 210
Query: 283 GDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVA 342
GDP G + TP ++ + + L A G+I LEGGY+L S++ SV + LL D
Sbjct: 211 GDPEGQMQATPECFAHLTQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPTPP 270
Query: 343 GSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKV 402
P +S IQ+V+ + +W TSL+ A ++SSS E+ +
Sbjct: 271 LLGLMVPCQSALESIQSVQTAQTPYW-----------TSLQQNVAPVLSSSTHSPEERSL 319
Query: 403 ETL 405
L
Sbjct: 320 RLL 322
>gi|164614599|gb|ABY64526.1| histone deacetylase 2 splice variant B [Tetrahymena thermophila]
Length = 423
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 203/365 (55%), Gaps = 32/365 (8%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI---PQRCVVLNAKE 64
G I + G++YD KH + H E P R+++I+N L G+ P +V K
Sbjct: 15 GLNINGQTGVVYDLEQLKHKSVR--QHVECPARLQSIFNHLTTQGLLKSPLVHIVDKLKP 72
Query: 65 AKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEV 124
A+ + H +N++ I+ + ++ +++ I + Y N+ S +AAYL G VIE
Sbjct: 73 AEKSIVKYAHDDNYIEFIEGMWPEK--TKKKEIY--MLDTYFNQSSKDAAYLGVGGVIES 128
Query: 125 AERVAEGELNSAFAIVRPPGHHA-EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIV 183
+R+ + +AF I+RPPGHH+ E GFC +NNVA+AA +L + G+ K+LI
Sbjct: 129 VDRIISKQWKNAFCIIRPPGHHSGESKVCTGFCFFNNVAIAAKYL---QKNHGVKKVLIF 185
Query: 184 DWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWE 243
DWD+HHG+ TQ +F DP VLF S+HRH+ G+FYP + G T G G G G+ IN+PW+
Sbjct: 186 DWDIHHGDGTQHIFQDDPNVLFVSMHRHDDGSFYPQS--GSVTNNGSGEGKGFKINIPWD 243
Query: 244 NG------RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS 297
G G +Y+ ++ I P+ ++F P+ I+ISAGFD+A GDPLG C++T GY+
Sbjct: 244 IGYSQNALTAGTDEYIYAFERIAFPIIQEFQPEFILISAGFDSAEGDPLGQCKLTYEGYA 303
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVI 357
V+ + ++ +Q ++ I N L +++ D+ + G ++ + S+ R
Sbjct: 304 VVKQNILTKSQLQL-----------KIKNIRLQMNLLIIFDQKINGYNQWQKYISSIRGR 352
Query: 358 QAVRK 362
+RK
Sbjct: 353 IQLRK 357
>gi|52550445|gb|AAU84294.1| acetoin utilization protein [uncultured archaeon GZfos9D1]
Length = 351
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 199/355 (56%), Gaps = 30/355 (8%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
G +Y KH+T HPE R++ I KL+ GI ++ + +A + L VH
Sbjct: 8 GFVYHADYLKHDT---GVHPETAERLRVIIRKLEETGIAEKLRRIVPTKASKEQLRYVHA 64
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE--GEL 133
++ ++ I RR A ++ L E + E A LAAG VI+ + V + L
Sbjct: 65 PEYIKEVEAIC------RRGGGALDPDTP-LCEDTYEIALLAAGGVIKAVDEVMDESNSL 117
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
FA++RPPGHHA P++ MGFC++NN+A+AA L + E GIN++LI DWDVHHGN T
Sbjct: 118 KHVFALIRPPGHHATPNKGMGFCIFNNIAIAAEHL---KREYGINRVLIADWDVHHGNGT 174
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q+MF+ D VL+FS H++ YP G+ +G+G G G+ +NVP G D YL
Sbjct: 175 QRMFFDDASVLYFSTHQY---PHYPGT--GWIEEVGKGEGEGFTVNVPLPAG-TDDDSYL 228
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----G 309
++IL+P+A +F PD +++S GFDA A DPL VT G+ + D A+ G
Sbjct: 229 YALNNILVPIAMEFRPDFVLVSVGFDAHAADPLASMNVTSRGFGRFTSLIKDIAEKNGNG 288
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKL 364
++V+ALEGGYNL +I+ S L+ N LL D+ SE ES R + VR ++
Sbjct: 289 RVVMALEGGYNLNAIAESALSVFNSLLSDE-----SELRVKESEIRASEQVRIRV 338
>gi|208967875|dbj|BAG72583.1| histone deacetylase 5 [synthetic construct]
Length = 1037
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 159/232 (68%), Gaps = 10/232 (4%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L
Sbjct: 712 SSSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL- 770
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 771 --QQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVG 826
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 827 GGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 886
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 887 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 938
>gi|148657296|ref|YP_001277501.1| histone deacetylase superfamily protein [Roseiflexus sp. RS-1]
gi|148569406|gb|ABQ91551.1| histone deacetylase superfamily [Roseiflexus sp. RS-1]
Length = 344
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 189/332 (56%), Gaps = 23/332 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R + + R H+ P H E R+ AI L A+G+ + + A+ A + L +V
Sbjct: 2 RTAIAINPRHAAHDEPQ---HVEQAARLHAITAALNASGLRSVLLEVPARPATEAQLRAV 58
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HTE + +++ S+ + S D + Y S +AA +AAG+ + V + V G
Sbjct: 59 HTEQMIEVVR-WSATRPRSWID------HDTYTTSASWDAALMAAGTTLAVVDAVVSGSA 111
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ FA+VRPPGHHA E+MGFCL+NNVA+AA ++ LG+ ++ IVD+DVHHGN T
Sbjct: 112 QNGFALVRPPGHHATRAESMGFCLFNNVAIAARHAID---HLGVTRVAIVDFDVHHGNGT 168
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F+ D RV F S H YP G IG G G G +N+P +G GDA +
Sbjct: 169 QDIFYDDDRVFFCSTHA---SPLYPGT--GAEREIGSGRGRGTTMNLPLPHG-VGDAGFA 222
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----G 309
++D +++P + + PD+I++SAG+DA DPLG ++ GY+ + ++L + A+ G
Sbjct: 223 RLFDDVVIPALRRYRPDLILVSAGYDAHWADPLGPLTLSVAGYAALTRRLKETAEEVCNG 282
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLEDKPV 341
+I L LEGGYNL +++ SVLAC+ VL D V
Sbjct: 283 RIALVLEGGYNLKALAASVLACLEVLANDDTV 314
>gi|428672233|gb|EKX73147.1| conserved hypothetical protein [Babesia equi]
Length = 791
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 203/375 (54%), Gaps = 57/375 (15%)
Query: 7 EGRTIKRRVGLLYDERMCK---HNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLN-- 61
E +IK+ +G+ YDE H+ P + H E P RI++I N+L+ + I + LN
Sbjct: 4 EEMSIKKLIGISYDEEHMASDLHHDP-SNTHQERPFRIRSILNRLKCSTIDNN-IGLNHK 61
Query: 62 ---------AKEAKDKNLLSVHTENHVNLIKNISS---KQFDSRRDRIASKL-------- 101
+K + LL HTE++++++K+ + + + ++R K
Sbjct: 62 LWDYMEYIPSKLVSKEILLLCHTESYLDVVKHWTDHFKELYKTKRGGRGVKNPPCLYPLD 121
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEG----------ELNSAFAIVRPPGHHAEPDE 151
Y+ S + A LA GSVI + + + +G + FAIVRPPGHHA +
Sbjct: 122 EDTYMTPDSGKVANLAVGSVISICDELIKGYKDGKVSNSSSIRKGFAIVRPPGHHATSNR 181
Query: 152 AMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH 211
MGFC+YNN+A+AA +L R + + +I I+DWDVH GN TQ++F+ DP VLF S+HR
Sbjct: 182 MMGFCIYNNIAIAAMYL---RKQHELKRIAIIDWDVHQGNGTQEIFYGDPNVLFVSIHR- 237
Query: 212 EFGTFYPANDDGFYTMIG------EGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAK 265
Y DD FY IG EGPGL YN+N+P E DAD + + +++P+
Sbjct: 238 -----YGTGDDKFYPYIGSIDEMGEGPGLKYNVNIPLER-EFEDADLMYAFSSVVIPLLD 291
Query: 266 DFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM----DFAQGKIVLALEGGYNL 321
F P+ I++S+GFDAA GD LGGC ++P GY+ KL +++G+++L LEGGY
Sbjct: 292 KFKPEFILVSSGFDAAKGDLLGGCNLSPKGYAWATTKLCTIADKYSEGRLLLVLEGGYEP 351
Query: 322 GSISNSVLACMNVLL 336
+S V A LL
Sbjct: 352 VMLSKCVEAVTEALL 366
>gi|20521101|dbj|BAA25526.2| KIAA0600 protein [Homo sapiens]
Length = 1080
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 158/232 (68%), Gaps = 10/232 (4%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L
Sbjct: 755 SSSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQ 814
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 815 Q---KLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVG 869
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 870 GGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 929
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 930 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 981
>gi|426347941|ref|XP_004041600.1| PREDICTED: histone deacetylase 5 [Gorilla gorilla gorilla]
Length = 1037
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 159/232 (68%), Gaps = 10/232 (4%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L
Sbjct: 712 SSSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL- 770
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 771 --QQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVG 826
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 827 GGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 886
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 887 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 938
>gi|402884657|ref|XP_003905792.1| PREDICTED: histone deacetylase 10 isoform 2 [Papio anubis]
Length = 651
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 195/359 (54%), Gaps = 26/359 (7%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA + L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASKEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRK-TQVLGEEELQALSRQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA++ + + G+++ILIVDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHSQRAAANGFCVFNNVAIAAAY---AKQKHGLHRILIVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A + G + TP ++ + L A G++
Sbjct: 239 VAAFLHLLLPLAFE--------------------GQMQATPECFAHLTHLLQVLAGGRVC 278
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D S P +S IQ+ R + +W +L
Sbjct: 279 AMLEGGYHLESLAESVCMTVQTLLGDSAPPLSGLMVPCQSALESIQSARAAQAPYWKSL 337
>gi|116748380|ref|YP_845067.1| histone deacetylase superfamily protein [Syntrophobacter
fumaroxidans MPOB]
gi|116697444|gb|ABK16632.1| histone deacetylase superfamily [Syntrophobacter fumaroxidans MPOB]
Length = 316
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 192/331 (58%), Gaps = 25/331 (7%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
R+ G LYD+R+ H T G HPE+P R++A++ ++ AG+ R ++ A AK K + +
Sbjct: 2 RKTGFLYDDRLLLHCT--GSNHPESPERLEAVYRGVEEAGLFPRLTLIKASPAKLKWIEA 59
Query: 73 VHTENHVNLIKN---ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
VH+ H+ + + +FD +++ + S E A LA G ++E V
Sbjct: 60 VHSPKHIMRFEEACLLEMGEFDHPDNQMCRE---------SYETALLAVGGLLEAVRMVM 110
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
EG +++AF VRPPGHHAE + A+GFC +NNVA+AA +LLN E G+ ++ IVD D HH
Sbjct: 111 EGIIDNAFCAVRPPGHHAEMNRALGFCYFNNVAIAARYLLN---EWGVERVGIVDIDAHH 167
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ +F DP V ++S H H F P F T G G G G+ +N P G+ GD
Sbjct: 168 GNGTQHIFEDDPSVFYYSAHEHPSFAF-PGTGREFET--GVGAGSGFTLNCPLLPGQ-GD 223
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ- 308
+Y+A+ + L P +F P +I++SAGFDA GD + +++ G+S +++KL++ A
Sbjct: 224 EEYMAILERDLAPAFAEFKPQVILVSAGFDAHVGDDMSDLKLSTEGFSRIMRKLVELADA 283
Query: 309 ---GKIVLALEGGYNLGSISNSVLACMNVLL 336
G+I+ LEGGY++ + + +++LL
Sbjct: 284 YSAGRIISVLEGGYSVQLLPELIRNHVSILL 314
>gi|109094628|ref|XP_001112171.1| PREDICTED: histone deacetylase 10-like isoform 1 [Macaca mulatta]
Length = 651
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 195/357 (54%), Gaps = 26/357 (7%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA + L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASKEELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G +
Sbjct: 65 SPEYVSLVRK-TQVLGEEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQ 123
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++ILIVDWDVHHG Q
Sbjct: 124 NGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILIVDWDVHHGQGIQ 180
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 181 YLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVA 240
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
+ H+LLP+A + G + TP ++ + L A G++
Sbjct: 241 AFLHLLLPLAFE--------------------GQMQATPECFAHLTHLLQVLAGGRVCAM 280
Query: 315 LEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D S P +S IQ+ R + +W +L
Sbjct: 281 LEGGYHLESLAESVCMTVQALLGDPAPPLSGLMVPCQSALESIQSARAAQAPYWKSL 337
>gi|344309841|ref|XP_003423583.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 10-like
[Loxodonta africana]
Length = 761
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 175/302 (57%), Gaps = 4/302 (1%)
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+H+ +V +++ S ++ K +++Y S A + G+ +++ + V G
Sbjct: 48 LHSPEYVAMVRGTQSLG-KVELQALSGKYDTVYFLTSLSICARMFPGATLQLVDAVLTGT 106
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
++ A+VRPPGHH++ A GFC++NNVA+AA + + G+++ILIVDWDVHHG
Sbjct: 107 AHNGLALVRPPGHHSQRTAANGFCVFNNVAIAAEYAKQKH---GLHRILIVDWDVHHGQG 163
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ +F DP VL+FS HR+E G F+P + +G G G G+ +N+PW G+ADY
Sbjct: 164 TQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADEVGRGHGRGFTVNLPWNQVGMGNADY 223
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A +F P++++ISAGFD+ GDP G RVTP ++ + + L+ A+G++
Sbjct: 224 VAAFLHVLLPLAFEFDPELVLISAGFDSVIGDPEGQMRVTPECFAHLTQLLLVLARGRVC 283
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGY+L ++ SV + LL D P S IQ VR + W +L
Sbjct: 284 AVLEGGYHLELLAESVCMTVQALLGDPAPPLLGAMVPCGSALESIQRVRAAQAPHWTSLQ 343
Query: 373 DE 374
+
Sbjct: 344 HQ 345
>gi|392411099|ref|YP_006447706.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
gi|390624235|gb|AFM25442.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
Length = 354
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 199/358 (55%), Gaps = 37/358 (10%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQ- 89
G+YHPE P R++ I+N + V + +EA + + + H +VN I + +
Sbjct: 18 GEYHPECPERLEVIYNMIDQLESELNFVEIPNREASLEEIATNHDPRYVNQIVTTAGRSN 77
Query: 90 --FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHA 147
D A S EAA A G + + + V EG + + FA +RPPGHHA
Sbjct: 78 TFLDPDTCTCAH----------SWEAASKAVGGLFNLVDAVIEGRVRNGFAFIRPPGHHA 127
Query: 148 EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFS 207
E AMGFCL+NN+A+AA + ++ ++++ I+DWD+HHGN TQ F+++ VLF S
Sbjct: 128 ERRRAMGFCLFNNIALAARYAISRHK---LSRVAIIDWDLHHGNGTQNAFYEEEEVLFIS 184
Query: 208 VHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDF 267
VH++ YP G +G+G G G+ IN+P G GD +YL V+ ++ PV + +
Sbjct: 185 VHQY---PHYPGT--GGIREVGQGRGEGHTINIPLAAG-AGDDEYLTVFHLLIAPVLEMY 238
Query: 268 GPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGS 323
P++I++SAGFDA DPLGG VT GYS ML+ LM A+ G+++L LEGGYNL +
Sbjct: 239 KPELILVSAGFDAHERDPLGGMAVTEKGYSQMLQILMHLAELYSSGRLILTLEGGYNLTA 298
Query: 324 ISNSVLACMNVL------LEDKPVAGSSEAY--PFESTWRVIQAVRKKLSAFWPTLAD 373
++NSV M +L ++ P S E F++ R + A+ KK +WP L++
Sbjct: 299 LTNSVKEIMGLLCSYNCDIDMVPFQPSPEKLNGTFKARLRDVLAMHKK---YWPNLSE 353
>gi|332860139|ref|XP_003317368.1| PREDICTED: histone deacetylase 10 isoform 1 [Pan troglodytes]
gi|410211906|gb|JAA03172.1| histone deacetylase 10 [Pan troglodytes]
Length = 649
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 197/362 (54%), Gaps = 26/362 (7%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRETQVLGKEELQA-LSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A + G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFE--------------------GQMQATPECFAHLTQLLQVLAGGRVC 278
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 279 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMVPCQSALESIQSARAAQAPHWKSLQ 338
Query: 373 DE 374
+
Sbjct: 339 QQ 340
>gi|383458397|ref|YP_005372386.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
gi|380730921|gb|AFE06923.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
Length = 348
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 130/323 (40%), Positives = 186/323 (57%), Gaps = 25/323 (7%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
LL D +H+ +G HPE+P R++ I L I V+ + + A D +L+VHT
Sbjct: 12 LLTDPLFLQHDAGEG--HPESPARLRRILQMLARNPIAG-TVMTHPRSATDAEILAVHTP 68
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
H++ ++ + + D + S S +AA LAAG+ ++ E V G +A
Sbjct: 69 AHLDAMEKLGGRFERIDEDTVVSP--------DSIDAARLAAGAAVQAVEAVMAGTARNA 120
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
FA+VRPPGHHAEP+ AMGFCLYNNVA+AA LG ++L++DWDVHHGN TQ
Sbjct: 121 FALVRPPGHHAEPERAMGFCLYNNVAIAA----EAGRRLGAERVLVLDWDVHHGNGTQAA 176
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
FW VL+ SVH+ +YP + G +G G G G+ +N G DADY ++
Sbjct: 177 FWGRRDVLYQSVHQF---PYYPGS--GAAPEVGRGEGQGFTVNCGLPGGNT-DADYGMIF 230
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIV 312
+ +LLPVA+ + PD++++SAGFD DP+GG VT G++ M + A+ GK+
Sbjct: 231 EELLLPVAQAYRPDLVLVSAGFDPHRADPIGGMDVTERGFAAMCTAVRKLAEEVSGGKLA 290
Query: 313 LALEGGYNLGSISNSVLACMNVL 335
L LEGGY+L +SNSV AC+ VL
Sbjct: 291 LVLEGGYSLEGLSNSVHACIEVL 313
>gi|397479549|ref|XP_003811076.1| PREDICTED: histone deacetylase 10 isoform 2 [Pan paniscus]
Length = 649
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 196/362 (54%), Gaps = 26/362 (7%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRE-TQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A + G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFE--------------------GQMQATPECFAHLTQLLQVLAGGRVC 278
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 279 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMVPCQSALESIQSARAAQAPHWKSLQ 338
Query: 373 DE 374
+
Sbjct: 339 HQ 340
>gi|320353627|ref|YP_004194966.1| histone deacetylase superfamily protein [Desulfobulbus propionicus
DSM 2032]
gi|320122129|gb|ADW17675.1| histone deacetylase superfamily [Desulfobulbus propionicus DSM
2032]
Length = 364
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 189/322 (58%), Gaps = 21/322 (6%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
G H E+P R++ I+ +L P+ L E + ++ + LI+ +++
Sbjct: 23 GRGHVESPQRLQCIYRELDR---PEVAAQLLFPEFGPAPVSAIALNHSDELIREVAATAG 79
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD 150
+ A S S EAA LAAG+VI+ R+A GE+++ F +VRPPGHHAE D
Sbjct: 80 HAAFYLDADTRTS----AASYEAALLAAGAVIDGINRLARGEIDNGFCLVRPPGHHAERD 135
Query: 151 EAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHR 210
+AMGFCL+NNVAV A + R LG+ +IL++DWD+HHGN TQ F++DP VL+ S+H+
Sbjct: 136 QAMGFCLFNNVAVGARW---ARKHLGLERILLLDWDLHHGNGTQHSFYRDPSVLYCSIHQ 192
Query: 211 HEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPD 270
+ YP + G +GEGPGLGY INVP +G GDA+Y + + ++ P+ + P+
Sbjct: 193 Y---PCYPGS--GAVGEVGEGPGLGYTINVPLCSGH-GDAEYARILNQMVAPLVHGYRPE 246
Query: 271 IIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGSISN 326
+I++S GFD AGDPLG R+T G + M + L++ A +++L LEGGY+L ++ +
Sbjct: 247 LILVSCGFDCMAGDPLGAMRLTATGIASMTRTLVELAAEVCDNRLLLVLEGGYDLDNVRS 306
Query: 327 SVLACMNVLLEDKPVAGSSEAY 348
LA ++ L P+A Y
Sbjct: 307 GSLAVLSE-LHGAPLAAEYPVY 327
>gi|226529806|ref|NP_001152758.1| histone deacetylase 10 isoform 2 [Homo sapiens]
gi|119593919|gb|EAW73513.1| histone deacetylase 10, isoform CRA_c [Homo sapiens]
Length = 649
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 195/362 (53%), Gaps = 26/362 (7%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRE-TQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH + A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A + G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFE--------------------GQMQATPECFAHLTQLLQVLAGGRVC 278
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 279 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQ 338
Query: 373 DE 374
+
Sbjct: 339 QQ 340
>gi|15213867|gb|AAK92206.1|AF407273_1 histone deacetylase 10 isoform beta [Homo sapiens]
Length = 649
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 195/362 (53%), Gaps = 26/362 (7%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRE-TQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH + A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A + G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFE--------------------GQMQATPECFAHLTQLLQVLAGGRVC 278
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 279 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQ 338
Query: 373 DE 374
+
Sbjct: 339 QQ 340
>gi|308478251|ref|XP_003101337.1| hypothetical protein CRE_13460 [Caenorhabditis remanei]
gi|308263238|gb|EFP07191.1| hypothetical protein CRE_13460 [Caenorhabditis remanei]
Length = 524
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 113/264 (42%), Positives = 164/264 (62%), Gaps = 20/264 (7%)
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
S+ ++ E+ A G+ N A IVRPPGHHA ++ GFC++NNVAVAA + + +
Sbjct: 36 SIDKIYEKDA-GQRN-ALVIVRPPGHHASASKSSGFCIFNNVAVAAKY---AQRRYKAKR 90
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
ILI+DWDVHHGN TQ++F++D V++ S+HRH+ G FYP + Y +GEG G G ++N
Sbjct: 91 ILILDWDVHHGNGTQEIFYEDANVMYMSIHRHDKGNFYPVGEPKDYFDVGEGAGEGMSVN 150
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
VP+ + GD +Y + I++P++ F PD+++ISAGFDAA DPLG RVTP +++M
Sbjct: 151 VPFSGAQMGDIEYQMAFQRIIMPISYQFNPDLVLISAGFDAAIDDPLGDYRVTPETFALM 210
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL--------LEDKPVAGSSEAYPFE 351
+L A G+++ LEGGYNL SISNS LA VL L D+ +S+ E
Sbjct: 211 TYQLSSLASGRVITVLEGGYNLTSISNSALAVCEVLQNRAMLRRLRDEKEQFASKPQKLE 270
Query: 352 S----TWRVIQAVRKKLSAFWPTL 371
S T R + A+++K +W L
Sbjct: 271 SSSIKTIREVCALQQK---YWSIL 291
>gi|383765981|ref|YP_005444962.1| putative deacetylase [Phycisphaera mikurensis NBRC 102666]
gi|381386249|dbj|BAM03065.1| putative deacetylase [Phycisphaera mikurensis NBRC 102666]
Length = 315
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 128/327 (39%), Positives = 186/327 (56%), Gaps = 19/327 (5%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL+YD+R+ H+T G HPE P+R++A+ ++L+A G+ QR L A L +H
Sbjct: 3 TGLIYDDRLLLHDT--GPTHPERPDRLRAVMDRLRADGLAQRTESLYFATAGRHRLGRLH 60
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
T +++ + + + + D I S + + S++ A LA G ++ V E V GELN
Sbjct: 61 TPAYLDRL-DAACAGGEPIIDDIDSCIGRV-----SADVARLALGGILRVTEAVGRGELN 114
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+AF RPPGHHAE D +MG+CLY N A AA L +LG++++ +VD+DVHHGN TQ
Sbjct: 115 NAFCATRPPGHHAEADRSMGYCLYANAAFAADLLTT---DLGLDRVAVVDFDVHHGNGTQ 171
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+ VL S+H + YP GF GEG G G +NV G GDADYL
Sbjct: 172 HLMAGRGDVLALSIHGNP-AVLYPGT--GFEHETGEGSGEGATVNVCMPPG-AGDADYLH 227
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GK 310
+ ++P + F P+ ++++AGFDA+ DPL RVT G+ M + L+D A GK
Sbjct: 228 AFRERVIPALEAFRPEALVLAAGFDASVRDPLAPMRVTDDGFRQMTRLLLDAADRLCGGK 287
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLE 337
+V LEGGY+L ++ V A + VLLE
Sbjct: 288 VVSILEGGYDLEGLAGGVAAHVGVLLE 314
>gi|328767063|gb|EGF77114.1| hypothetical protein BATDEDRAFT_14326 [Batrachochytrium
dendrobatidis JAM81]
Length = 210
Score = 218 bits (554), Expect = 1e-53, Method: Composition-based stats.
Identities = 102/209 (48%), Positives = 132/209 (63%), Gaps = 3/209 (1%)
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
AA + G I E V ++ +AFA+VRPPGHHAE MGFC YNNVA+A + +
Sbjct: 5 AAGFSCGGAIAACESVWTNQVTNAFALVRPPGHHAEAHRPMGFCFYNNVAIATRRM---K 61
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
E + +I+IVDWD+HHGN TQ F+ DP VLF S+HR E G FYP IG
Sbjct: 62 SEFNVQRIMIVDWDIHHGNGTQAEFYDDPNVLFISIHRFEDGRFYPNYRVAGPEWIGGKQ 121
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVT 292
G NINV W GDADY+ V+ +++P+ ++F PD++I+SAGFDAA GDP+G C VT
Sbjct: 122 ARGRNINVAWPCAGLGDADYMQVFRDLIMPIGQEFDPDLVIVSAGFDAAHGDPIGECHVT 181
Query: 293 PYGYSVMLKKLMDFAQGKIVLALEGGYNL 321
P YS M L A G++VL LEGGY++
Sbjct: 182 PACYSQMTHMLKSLANGRLVLVLEGGYHV 210
>gi|308478451|ref|XP_003101437.1| hypothetical protein CRE_13458 [Caenorhabditis remanei]
gi|308263338|gb|EFP07291.1| hypothetical protein CRE_13458 [Caenorhabditis remanei]
Length = 364
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 145/216 (67%), Gaps = 5/216 (2%)
Query: 120 SVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINK 179
S+ ++ E+ A G+ N A IVRPPGHHA ++ GFC++NNVAVAA + + +
Sbjct: 36 SIDKIYEKDA-GQRN-ALVIVRPPGHHASASKSSGFCIFNNVAVAAKY---AQRRYKAKR 90
Query: 180 ILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNIN 239
ILI+DWDVHHGN TQ++F++D V++ S+HRH+ G FYP + Y +GEG G G ++N
Sbjct: 91 ILILDWDVHHGNGTQEIFYEDANVMYMSIHRHDKGNFYPVGEPKDYFDVGEGAGEGMSVN 150
Query: 240 VPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM 299
VP+ + GD +Y + +++P++ F PD+++ISAGFDAA DPLG RVTP +++M
Sbjct: 151 VPFSGAQMGDIEYQMAFQRVIMPISYQFNPDLVLISAGFDAAIDDPLGDYRVTPETFALM 210
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
+L A G+++ LEGGYNL SISNS LA VL
Sbjct: 211 TYQLSSLASGRVITVLEGGYNLTSISNSALAVCEVL 246
>gi|406913016|gb|EKD52505.1| histone deacetylase family protein [uncultured bacterium]
Length = 306
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 185/327 (56%), Gaps = 27/327 (8%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ G+ +DER KH G HPE+P R+ AI + A R V + + A + + S+
Sbjct: 2 KTGIFWDERCTKHEMSRG--HPESPQRLWAIKQVIDAN---PRLVHIEPRLASFEEVSSI 56
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
HTE V L+ D R + + + + N+ ++ AA+L+AGS I +AE+V +GE
Sbjct: 57 HTEKLVRLV--------DESRGKSNTCFDPDTFSNKHTATAAFLSAGSTIALAEKVEKGE 108
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
++ F+ RPPGHHAE D MGFC +NN+A+AA L+ + + +I IVD+DVHHGN
Sbjct: 109 WDNGFSFARPPGHHAEHDCVMGFCFFNNIAIAAQQLIEKHHK---KRIAIVDYDVHHGNG 165
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ F+ VLF SVH + FYP F T G G G+++N P G D DY
Sbjct: 166 TQASFYDRDDVLFCSVHHY---PFYPGTGGSFET--GASRGKGFSVNAPLP-GDSDDDDY 219
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ---- 308
V+D+I++P F P+ I++SAGFDA DPLGG ++T G++ M K+L++ A
Sbjct: 220 KKVFDNIIVPAVDSFKPEFILVSAGFDAHERDPLGGMKLTKQGFAFMNKRLIELAYLHCG 279
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVL 335
GKIV LEGGY++ + V + +
Sbjct: 280 GKIVFVLEGGYDMQGLQEGVESVFEAM 306
>gi|55778379|gb|AAH86431.1| Hdac5 protein, partial [Rattus norvegicus]
Length = 328
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 159/232 (68%), Gaps = 10/232 (4%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS A +A G ++E+A +VA GEL + FAI+RPPGHHAE AMGFC +N+VA+ A L
Sbjct: 3 SSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLL- 61
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
+ +L + K+LIVDWD+HHGN TQ+ F+ DP VL+ S+HR++ G F+P + G +G
Sbjct: 62 --QQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVG 117
Query: 230 EGPGLGYNINVPWENGR---CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
GPG+GYN+NV W G GD +YL + +++P+A +F PD++++SAGFDA G
Sbjct: 118 GGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLS 177
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
PLGG VT + + ++LM A G++VLALEGG++L +I ++ AC++ LL
Sbjct: 178 PLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 229
>gi|406898250|gb|EKD41915.1| histone deacetylase family protein [uncultured bacterium]
Length = 315
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 191/333 (57%), Gaps = 31/333 (9%)
Query: 10 TIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
T +++ GL++DER H+T G +HPE P R+ AI L+ + + + A
Sbjct: 7 TTEKKTGLVWDERYLLHDT--GLFHPERPERLNAIKQILKD---DRSYEWITPRIASIDE 61
Query: 70 LLSVHTENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAE 126
+ VHT++H++ + IS FD D A S+EAA+LAAG +++ +
Sbjct: 62 IAWVHTKDHIDEVLKCDGISQHFFDG--DTPAGP--------HSTEAAFLAAGGLMKAVQ 111
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
V EG++ +AF RPPGHHAE D AMGFC++NNVA+AA +L+ ++ + +I+I+D+D
Sbjct: 112 EVEEGKIKNAFVFPRPPGHHAESDHAMGFCIFNNVAIAAQYLIKQKNK---KRIVIMDFD 168
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHGN TQ F++ V + S HR FYP G T +GE G+G +NVP +
Sbjct: 169 VHHGNGTQHFFYERSDVFYLSTHRF---PFYPGTGSGDETGVGE--GMGTTLNVPL-DAY 222
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
D DY A +++ ++P + PD I++SAG+DA DPLGG +VT G+ +M + L +
Sbjct: 223 ADDEDYRASFENQIIPAIDHYKPDFILVSAGYDAHIRDPLGGMKVTKEGFFMMSQSLSEL 282
Query: 307 AQ----GKIVLALEGGYNLGSISNSVLACMNVL 335
A+ GKIV LEGGY+L + V A + L
Sbjct: 283 AKKHCGGKIVYVLEGGYDLKGLQEGVSATLESL 315
>gi|426394919|ref|XP_004063730.1| PREDICTED: histone deacetylase 10 isoform 2 [Gorilla gorilla
gorilla]
Length = 649
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 195/359 (54%), Gaps = 26/359 (7%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRE-TQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A + G + TP ++ + + L A G++
Sbjct: 239 VAAFLHLLLPLAFE--------------------GQMQATPECFAHLTQLLQVLAGGRVC 278
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D S P +S I++ R + W +L
Sbjct: 279 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMVPCQSALESIRSARAAQAPHWKSL 337
>gi|221632213|ref|YP_002521434.1| histone deacetylase family protein [Thermomicrobium roseum DSM
5159]
gi|221156465|gb|ACM05592.1| histone deacetylase family protein [Thermomicrobium roseum DSM
5159]
Length = 319
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 183/329 (55%), Gaps = 29/329 (8%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
L+ R +H T D HPE P R++AI L+ G V+ A ++ + +H
Sbjct: 8 LITSRRFLEHETGD---HPERPARLEAILQLLERTGRLDNRPVIEPDPADEETIALIHDR 64
Query: 77 NHVNLIKNISSKQ---FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
++ ++ +++ D+ D I S S E A LA G+V++ E V G+
Sbjct: 65 AYIVELREFAARGGGWLDA--DTIVSPR--------SFEVARLAVGAVVQAVESVLSGQA 114
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
FA++RPPGHHAEP+ MGFCL+NN+AVAA + L G+ +I I+DWDVHHGN T
Sbjct: 115 RRVFALIRPPGHHAEPERGMGFCLFNNIAVAAQYALE---RYGLRRIAIIDWDVHHGNGT 171
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F++ RV F S+H+ YP G IGEGPG GY +N+P G D YL
Sbjct: 172 QAAFYRTDRVFFVSLHQW---PLYPGT--GRAEEIGEGPGRGYTLNIPLAPG-SDDQVYL 225
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----G 309
A + + + P + P+++++SAG+DA DPL VT +G++ M ++ A+ G
Sbjct: 226 AAFANEIEPRLAAYRPELVMVSAGYDAHYADPLAAMAVTEHGFAAMASQVRAIAEVWCDG 285
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLED 338
++VLALEGGYNL ++++SV A ++ L D
Sbjct: 286 RLVLALEGGYNLSALASSVAATLDALDTD 314
>gi|302038518|ref|YP_003798840.1| putative deacetylase, histone deacetylase family [Candidatus
Nitrospira defluvii]
gi|300606582|emb|CBK42915.1| putative Deacetylase, histone deacetylase family [Candidatus
Nitrospira defluvii]
Length = 314
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 186/326 (57%), Gaps = 21/326 (6%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +YD R +H+ G HPE+PNR++AI +L+ +G ++ + A+D+ + VH
Sbjct: 4 TGFIYDPRYLEHDMGAG--HPESPNRLRAIMQRLEQSGTLASLTRIDPRTAEDEWITLVH 61
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+V ++ + RI+ ++ ++ GS AAYLAAG + + + G +
Sbjct: 62 QPEYVAMLNRQAPTH-----GRISLDADT-SMSPGSLRAAYLAAGGALAGVDAIMTGRVQ 115
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
AF VRPPGHHAE D AMGFCL+NNVA+AA + + G+ ++LIVDWDVHHGN TQ
Sbjct: 116 HAFCAVRPPGHHAEADRAMGFCLFNNVAIAARY---AQKRYGVQRVLIVDWDVHHGNGTQ 172
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
F DP VLFFS H++ YP G G G G G INVP E G GD +Y A
Sbjct: 173 HSFESDPSVLFFSTHQY---PHYPGT--GRAGECGRGAGEGLTINVPMEAGE-GDDEYRA 226
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGK 310
V+ +LLP A F P+ +IISAGFDA DPL +T GY+ + + A QG+
Sbjct: 227 VFQKVLLPAADAFKPEFVIISAGFDAHRDDPLASMGLTEDGYADLTNIVAGIARQHCQGR 286
Query: 311 IVLALEGGYNLGSISNSVLACMNVLL 336
++ +LEGGYNL +++ SV + L+
Sbjct: 287 LLSSLEGGYNLTALAASVERHLQALV 312
>gi|169830473|ref|YP_001716455.1| histone deacetylase superfamily protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169637317|gb|ACA58823.1| histone deacetylase superfamily [Candidatus Desulforudis
audaxviator MP104C]
Length = 331
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 194/349 (55%), Gaps = 32/349 (9%)
Query: 1 MEVKSGEGRTIKR---------RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAA 51
+ + GEG TI+ R+ ++YD +H+T HPE+ R++ L AA
Sbjct: 2 LSIGDGEGFTIETPVQPAAREARLAVVYDPIYLEHDTGS---HPESAERLRHATAALHAA 58
Query: 52 GIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSS 111
G +R ++ + A + + VH ++ ++ + +Q R D + + Y
Sbjct: 59 GRFERAALVRPRRATEAEVERVHAAEYLADVRE-ACRQGRRRLDPDTAVCPASY------ 111
Query: 112 EAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNE 171
E A AAG + E V +G + A A+VRPPGHHA P +MGFCL+NNVAVAA L
Sbjct: 112 EVAMWAAGGALTALEVVMDGRFDRALALVRPPGHHALPARSMGFCLFNNVAVAARHALE- 170
Query: 172 RPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEG 231
G+ +IL+VDWD HHGN T+++F++DPRVLFFS+H +G YP G +G G
Sbjct: 171 --VYGLERILVVDWDFHHGNGTEEIFYEDPRVLFFSIHS-RYG--YPGT--GHADRVGRG 223
Query: 232 PGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRV 291
G G+NINVP + GDA A + +L+P A D+ P+++++SAG D DPLGG +
Sbjct: 224 EGAGFNINVPLPDS-AGDAGCEAAFREVLVPAAGDYRPELVMVSAGQDGYYADPLGGLGL 282
Query: 292 TPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSISNSVLACMNVLL 336
TP GY+ + + + A+ G+IV ALEGGY+L ++ ++ ++ L
Sbjct: 283 TPAGYARLAGLVREIAEAHCGGRIVAALEGGYHLKGLAETLGVVLDAWL 331
>gi|355565322|gb|EHH21811.1| hypothetical protein EGK_04956, partial [Macaca mulatta]
Length = 922
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 226/436 (51%), Gaps = 59/436 (13%)
Query: 15 VGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH G HPE+ RI++IW++LQ G+ +C + ++A + L +
Sbjct: 491 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT 550
Query: 73 VHTENHVNL--IKNISSKQFDSRRDRIASKLNSIYL---------------NE-GSSEAA 114
VH+E H L ++ ++ DS++ + L S+++ NE S+ AA
Sbjct: 551 VHSEAHTLLYGTNPLNRQKLDSKK--LLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAA 608
Query: 115 YLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM-GFCLYNNVAVA-------AS 166
LA G V+E+ +VA GEL + FA+VRPPGHHAE + C + V AS
Sbjct: 609 RLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPIYATCRLQLLGVECRCRGLRAS 668
Query: 167 FLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA----NDD 222
L R V WDVHHGN TQ+ F+ DP VL+ S+HR++ G F+P ++
Sbjct: 669 LLAQTR----------VRWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEV 718
Query: 223 GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAA 282
G + + P ++ R GDA+YLA + +++P+A +F PD++++S+GFDA
Sbjct: 719 GLHAHV--SPDSNFSQTSACVAPR-GDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVE 775
Query: 283 G--DPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL--ED 338
G PLGG ++ + + K+LM A G+IVLALEGG++L +I ++ AC++ LL E
Sbjct: 776 GHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNEL 835
Query: 339 KPVAGSS-EAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSED 397
P+ + P + R ++ V + S +W L T SL I + E+
Sbjct: 836 DPLPEKVLQQRPNANAVRSMEKVMEIHSKYWRCLQRATSTAGRSL-------IEAQTCEN 888
Query: 398 EDTKVETLEAVLQVAL 413
E+ + T A L V +
Sbjct: 889 EEAETVTAMASLSVGV 904
>gi|403334752|gb|EJY66545.1| hypothetical protein OXYTRI_13167 [Oxytricha trifallax]
Length = 417
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 197/365 (53%), Gaps = 22/365 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+VG YD M H HPE P+RI AI+ L+ A + +N + ++LL V
Sbjct: 24 KVGFAYDNYMLLHENHKYS-HPERPSRIMAIYQNLEKAKLLPELERINFEPVNKRHLLRV 82
Query: 74 HTENHVNLIKN--------ISSKQFDSRR--DRIASKLNSIYLNEGSSEAAYLAAGSVIE 123
H E+ ++ + + KQ R + + +Y N + E AYLAAG+ +
Sbjct: 83 HDEHLIDRVDDSIYNAKALFEGKQILKVRGETKYMDESYDVYANLYTKECAYLAAGASVA 142
Query: 124 VAERVAEG--ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+ V +++S FA +RPPGHHA ++ GFCL+NN AVAA + + + I K+
Sbjct: 143 SCDAVFSEVPKVDSVFAAIRPPGHHASCEKMAGFCLFNNAAVAARSI---QVDHNIKKVC 199
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
I DWD+H G+ T ++F++D +L+ S+HR++ G FYP G Y +IG+ G GYNI+
Sbjct: 200 IFDWDIHVGDGTSQIFYEDDSILYISLHRYDDGMFYPGKA-GSYELIGKDAGKGYNIHYA 258
Query: 242 ---WENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSV 298
+ D +Y ++L P+ ++F P+ I+IS GFD+A GDPLG VTPYGY+
Sbjct: 259 FNAYSAKEVSDKEYAYACQNLLFPIIQEFEPEAILISCGFDSAKGDPLGQIGVTPYGYAW 318
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQ 358
M LM KIV+ LEGGYNL +++NS A + L D P + E + S ++ Q
Sbjct: 319 MTYGLMQICP-KIVVLLEGGYNLDALANSSEAVIRTLKID-PKSNDDEVFNEYSKSKLNQ 376
Query: 359 AVRKK 363
+ K
Sbjct: 377 PLTHK 381
>gi|159478817|ref|XP_001697497.1| histone deacetylase [Chlamydomonas reinhardtii]
gi|158274376|gb|EDP00159.1| histone deacetylase [Chlamydomonas reinhardtii]
Length = 223
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 141/225 (62%), Gaps = 8/225 (3%)
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
LAAGS EVA RV G AI+RPPGHHAE AMGFC YNN AVAA
Sbjct: 1 LAAGSAAEVARRVCSGAARHGAAIIRPPGHHAESSVAMGFCYYNNAAVAARAAQAAG--- 57
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
+++++DWDVHHGN TQ++ + DP VL+ S HR++ GT+YP D + +G G G G
Sbjct: 58 -ARRVVVMDWDVHHGNGTQRILYDDPSVLYMSTHRYDHGTYYPGTGDA--SEVGVGAGEG 114
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
+ +NVPW DAD LA + H++LP+A +F PD++I+SAGFDA GDPLGGCRV+P
Sbjct: 115 FTVNVPWNCSGVRDADMLAAFRHVILPIASEFRPDLVIVSAGFDAVEGDPLGGCRVSPAA 174
Query: 296 YSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
+ L A VL LEGGYNL + + + AC+ VLL + P
Sbjct: 175 FGHFTALLSALAPS--VLLLEGGYNLSATAAATEACLRVLLGEAP 217
>gi|348551632|ref|XP_003461634.1| PREDICTED: histone deacetylase 10-like [Cavia porcellus]
Length = 702
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 189/358 (52%), Gaps = 33/358 (9%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
LL+D CK E P R+ A LQ G+ QRC+ + A+EA + L VH+
Sbjct: 16 LLWDNSECKI---------ECPERLAAALGGLQQCGLEQRCLYIAAREASEAELGLVHSP 66
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
+V L++ + + + ++ + +++Y + + A LAAG+ +++ + V G ++
Sbjct: 67 EYVALVRRTQTLGTEELQA-LSGQYDAVYFHPSTFHCARLAAGAALQLVDAVLTGAAHNG 125
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
A+VRPPGHH++ A GFC++NNVA+AA + + G+++ILIVDWD+HHG Q +
Sbjct: 126 LALVRPPGHHSQRAAANGFCVFNNVAIAAE---HAKRTHGLHRILIVDWDIHHGQGIQYI 182
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
F DP VL+FS HR+E G F+P + +G+ G G+ +N+PW G+ADYLA +
Sbjct: 183 FEDDPSVLYFSWHRYEHGRFWPFLPESDADTVGQRQGRGFTVNLPWNQVGMGNADYLAAF 242
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALE 316
H+LLPVA + G + TP ++ + + L A G++ LE
Sbjct: 243 LHVLLPVAFE--------------------GQMQATPECFAHLTRLLQVLAGGRVCAVLE 282
Query: 317 GGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
GGY+L S++ SV + LL D P +S IQ VRK + W +L +
Sbjct: 283 GGYHLESLAQSVCMTVRALLGDPTPKLLGPMTPCQSALESIQNVRKAQAPHWKSLQQQ 340
>gi|418713784|ref|ZP_13274507.1| histone deacetylase family protein [Leptospira interrogans str. UI
08452]
gi|410789775|gb|EKR83473.1| histone deacetylase family protein [Leptospira interrogans str. UI
08452]
Length = 313
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 176/320 (55%), Gaps = 26/320 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +Y + HN H EN +R+ A N+L + K+ ++ L +H
Sbjct: 3 TGFIYSQDFLYHNANSTIPHYENSDRLLACLNRLHQSSYFNSLFFPEMKKFPNEFLNEIH 62
Query: 75 TENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
++NH+ I+N K+ FDS E S +AY AA S I ++E + G
Sbjct: 63 SQNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANSGIILSEFLISGT 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L N G KI I+DWDVHHGN
Sbjct: 113 IKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNN----GFKKIFIIDWDVHHGNG 168
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++DP + + S+H+ FYP G T G+G G+G N+P + GD Y
Sbjct: 169 TQEIFYEDPNIFYLSIHQF---PFYPMT--GLATETGKGKGIGTTKNIPMQ-VNSGDQAY 222
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS----VMLKKLMDFAQ 308
+ + I++P + F PDI++ISAGFDA DPLGG +T G+ ++L+ +
Sbjct: 223 IQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNITTKGFEDLTRIILESVDKICS 282
Query: 309 GKIVLALEGGYNLGSISNSV 328
GK++ LEGGYNL ++S SV
Sbjct: 283 GKVLSFLEGGYNLAALSESV 302
>gi|24213615|ref|NP_711096.1| histone deacetylase [Leptospira interrogans serovar Lai str. 56601]
gi|386073219|ref|YP_005987536.1| histone deacetylase [Leptospira interrogans serovar Lai str. IPAV]
gi|24194411|gb|AAN48114.1| histone deacetylase [Leptospira interrogans serovar Lai str. 56601]
gi|353457008|gb|AER01553.1| histone deacetylase [Leptospira interrogans serovar Lai str. IPAV]
Length = 313
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 177/320 (55%), Gaps = 26/320 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +Y + HN H EN +R+ A N+L + K+ ++ L +H
Sbjct: 3 TGFIYSQDFLYHNANSTIPHYENSDRLLACLNRLHQSSYFNSLFFPEMKKLPNEFLNEIH 62
Query: 75 TENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
++NH+ I+N K+ FDS E S +AY AA S I ++E + G
Sbjct: 63 SQNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANSGIILSEFLISGT 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L N G KI I+DWDVHHGN
Sbjct: 113 IKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNN----GFKKIFIIDWDVHHGNG 168
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++DP + + S+H+ FYP G T G+G G+G N+P + GD Y
Sbjct: 169 TQEIFYEDPNIFYLSIHQF---PFYPMT--GLATETGKGKGIGTTKNIPMQ-VNSGDQAY 222
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
+ + I++P + F PDI++ISAGFDA DPLGG +T G+ + + +++ A
Sbjct: 223 IQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNITTKGFEDLTRIILESADKICS 282
Query: 309 GKIVLALEGGYNLGSISNSV 328
GK++ LEGGYNL ++S SV
Sbjct: 283 GKVLSFLEGGYNLAALSESV 302
>gi|432091618|gb|ELK24640.1| Histone deacetylase 10 [Myotis davidii]
Length = 635
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/277 (39%), Positives = 167/277 (60%), Gaps = 16/277 (5%)
Query: 100 KLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYN 159
+L + + +A LAAG+ +++ + V G +++ A+VRPPGHH++ A GFC++N
Sbjct: 33 RLTCTSAPQSTFHSARLAAGAGLQLVDAVLTGAVHNGLALVRPPGHHSQRAAANGFCVFN 92
Query: 160 NVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPA 219
NVA+AA + + + G+++ILIVDWD+HHG TQ F DP VL+FS HR+E G F+P
Sbjct: 93 NVAIAAR---HAQQKHGLHRILIVDWDIHHGQGTQYTFEDDPSVLYFSWHRYEHGRFWPY 149
Query: 220 NDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFD 279
+ +G+G G G+ +N+PW G+ADYLA + H+LLP+A +F P ++++SAGFD
Sbjct: 150 LQESDAVAVGQGRGRGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPQLVLVSAGFD 209
Query: 280 AAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLED- 338
+A GDP G + TP ++ + + L A G++ LEGGYNL S+S SV + LL D
Sbjct: 210 SAIGDPEGQMQATPECFAHLTQLLRVLAGGRVCAMLEGGYNLESLSESVCMTVQALLGDP 269
Query: 339 -KPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADE 374
P+A S IQ+VR W +L +
Sbjct: 270 APPLALES-----------IQSVRAAQIPHWTSLQQQ 295
>gi|345313848|ref|XP_001519396.2| PREDICTED: histone deacetylase 6-like, partial [Ornithorhynchus
anatinus]
Length = 796
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 151/256 (58%), Gaps = 7/256 (2%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R GL+YD M +H +HPE P RI I + G+ QRC L A+ A D+ LL
Sbjct: 289 RTGLVYDPTMMEHYNMWDSHHPELPQRISRIAQRHAELGLTQRCRALPARLASDQELLLC 348
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+ +V ++ S + R + NSIY+ S A LAAGS + E V +G++
Sbjct: 349 HSPEYVEQMRATSGLK-PRELHREGERYNSIYIAPRSFHCAQLAAGSACSLVEAVLDGQV 407
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL--LNERPELGINKILIVDWDVHHGN 191
+ AIVRPPGHHAE D A GFC +N+VAVAA L RP ++LI+DWDVHHGN
Sbjct: 408 RNGVAIVRPPGHHAERDTACGFCFFNSVAVAARHAQQLAGRP----LRVLILDWDVHHGN 463
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ MF +DP VL+ S+HR++ G+F+P ++DG + G G G G+ +NVPW R GD +
Sbjct: 464 GTQHMFEEDPSVLYVSLHRYDHGSFFPTSEDGDSSQTGRGRGEGFTLNVPWNGPRMGDPE 523
Query: 252 YLAVWDHILLPVAKDF 267
YL + I++PVA +
Sbjct: 524 YLTAFHRIIMPVAYEL 539
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 135/223 (60%), Gaps = 6/223 (2%)
Query: 54 PQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDR-IASKLNSIYLNEGSSE 112
P + A+ A + LL VH++ + L++ S++Q R +A +S++L+ S
Sbjct: 23 PHLSLSPQARPATQEELLRVHSQEFLKLME--STQQMSEEELRALADTYDSVFLHPNSYA 80
Query: 113 AAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNER 172
A LA G+V+++ + V GE+ + A+VRPPGHHA+ + G+C++N++AV+A + +
Sbjct: 81 CARLATGTVLQLVDMVMAGEVRNGLAVVRPPGHHAQRERMDGYCMFNHLAVSAR---HAQ 137
Query: 173 PELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232
+ + ++LIVDWDVHHG TQ++F +D VL+FS+HR+E F+P + + G G
Sbjct: 138 EKHQVERVLIVDWDVHHGQGTQRIFDQDSSVLYFSIHRYEHARFWPHLPESDWRAAGIGR 197
Query: 233 GLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIIS 275
G GY INVPW D DY++ + H+LLPVA + P ++S
Sbjct: 198 GRGYTINVPWNQVGMRDPDYISAFLHLLLPVAFESYPSSALLS 240
>gi|146185056|ref|XP_001030816.2| Histone deacetylase family protein [Tetrahymena thermophila]
gi|146142935|gb|EAR83153.2| Histone deacetylase family protein [Tetrahymena thermophila SB210]
Length = 359
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 186/330 (56%), Gaps = 18/330 (5%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
++VG +YDERM H HPE P RI+ I L+ G+ + V+N E K++L+
Sbjct: 7 KKVGFIYDERMLLHKLSKQPPHPECPERIEKIIENLKKTGLWSQLDVINQVEPIQKDILN 66
Query: 73 -VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VH +++V+L++ + + + LN Y N+ + ++A+L++G+VI+ + +
Sbjct: 67 KVHRDSYVDLVEQMWPEGCEKEN----MVLNGCYYNKYTGQSAFLSSGAVIQSIDLIKSK 122
Query: 132 ELNSAFAIVRPPGHHA-EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
++AF VRPPGHH+ + GFC +NNV V A +L R + + KI I D+DVHHG
Sbjct: 123 SWHTAFCCVRPPGHHSGASQQCSGFCFFNNVVVGAKYL---REKYSVKKIAIFDFDVHHG 179
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR---C 247
+ TQ + + D +LF S+H+++ G FYP + G G+NIN+ W
Sbjct: 180 DGTQALTYDDHELLFISIHQYDEGKFYPFQSGDLSKV-----GNGFNINIGWNTSNFQSA 234
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GD +Y+ ++ I++P +F PD I ISAGFD+AA D LG C++T GY M +L+
Sbjct: 235 GDDEYIYAFESIVMPALTEFQPDFIFISAGFDSAANDKLGRCQLTNIGYEYMSSRLVQIF 294
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLE 337
++ LEGGYNL SI + A + +L+
Sbjct: 295 PN-LLFVLEGGYNLDSIQWASEAVIRRILD 323
>gi|297709233|ref|XP_002831342.1| PREDICTED: histone deacetylase 10 isoform 2 [Pongo abelii]
Length = 674
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 194/369 (52%), Gaps = 25/369 (6%)
Query: 17 LLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+Y E M D + E P R+ A ++L+ G+ QRC++L+A+EA ++ L VH
Sbjct: 5 LVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLLLSAREASEEELGLVH 64
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+ +V+L++ A + + + A LAAG+ +++ + V G +
Sbjct: 65 SPEYVSLVRETQVLXXXHMHVLCAQGVICALHPQSTFHCARLAAGAGLQLVDAVLTGAVQ 124
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG Q
Sbjct: 125 NGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQGIQ 181
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F DP +L+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+A
Sbjct: 182 YLFEDDPSILYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVA 241
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLG---GC---------RVTPYGYSVMLKK 302
+ H+LLP+A + A G P G C R TP ++ + +
Sbjct: 242 AFLHLLLPLAFEV--------TAQRAPPGQPGGRGTSCLECASEGRRRPTPECFAHLTQL 293
Query: 303 LMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRK 362
L A G++ LEGGY+L S++ SV + LL D S P +S IQ+ R
Sbjct: 294 LQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGSMVPCQSALESIQSARA 353
Query: 363 KLSAFWPTL 371
+ W +L
Sbjct: 354 AQAPHWKSL 362
>gi|403366593|gb|EJY83099.1| hypothetical protein OXYTRI_19281 [Oxytricha trifallax]
Length = 396
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 196/365 (53%), Gaps = 22/365 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+VG YD M H HPE P+RI AI+ L+ + +N + ++LL V
Sbjct: 3 KVGFAYDNYMLLHENHKYS-HPERPSRIMAIYQNLEKVKLLPELERINFEPVNKRHLLRV 61
Query: 74 HTENHVNLIKN--------ISSKQFDSRR--DRIASKLNSIYLNEGSSEAAYLAAGSVIE 123
H E+ ++ + + KQ R + + +Y N + E AYLAAG+ +
Sbjct: 62 HDEHLIDRVDDSIYNAKALFEGKQILKVRGETKYMDESYDVYANLYTKECAYLAAGASVA 121
Query: 124 VAERVAEG--ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+ V +++S FA +RPPGHHA ++ GFCL+NN AVAA + + + I K+
Sbjct: 122 SCDAVFSEVPKVDSVFAAIRPPGHHASCEKMAGFCLFNNAAVAARSI---QVDHNIKKVC 178
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
I DWD+H G+ T ++F++D +L+ S+HR++ G FYP G Y +IG+ G GYNI+
Sbjct: 179 IFDWDIHVGDGTSQIFYEDDSILYISLHRYDDGMFYPGKA-GSYELIGKDAGKGYNIHYA 237
Query: 242 WEN---GRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSV 298
+ D +Y ++L P+ ++F P+ I+IS GFD+A GDPLG VTPYGY+
Sbjct: 238 FNEYSAKEVSDKEYAYACQNLLFPIIQEFKPEAILISCGFDSAKGDPLGQIGVTPYGYAW 297
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQ 358
M LM KIV+ LEGGYNL +++NS A + L D P + E + S ++ Q
Sbjct: 298 MTYGLMQICP-KIVVLLEGGYNLDALANSSEAVIRTLKID-PKSNDDEDFNEYSKSKLNQ 355
Query: 359 AVRKK 363
+ K
Sbjct: 356 PLTHK 360
>gi|298244138|ref|ZP_06967944.1| Histone deacetylase [Ktedonobacter racemifer DSM 44963]
gi|297551619|gb|EFH85484.1| Histone deacetylase [Ktedonobacter racemifer DSM 44963]
Length = 386
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 190/331 (57%), Gaps = 20/331 (6%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQR--CVVLNAKEAKDKNLLS 72
+YD +H TP+ HPE P R+ LQA +R V L + A L +
Sbjct: 3 TAFIYDPIFLEHITPEQ--HPERPQRLDESMQLLQALKWFERDDLVQLQPRAATVDELAT 60
Query: 73 VHTENHVNLIKNISSK--QFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEVAERVA 129
VH ++ ++ S K + ++ R + Y++ + EAA AAG+ + + +
Sbjct: 61 VHEREYIQEVEAASKKAAEIEASGGRNTQFFATDTYVSAKTYEAALKAAGAPLTAIDALL 120
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
+GE+ +A+ +VRPPGHHA + AMGFC++NNVAVAA + L + G+ +++I+D+DVHH
Sbjct: 121 KGEIKNAYCLVRPPGHHAVAESAMGFCIFNNVAVAARYALEKH---GLERVMIIDYDVHH 177
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ+MF+ DPRVL+FSVH+ FYP G T +GEG GLG INVP R G
Sbjct: 178 GNGTQEMFYNDPRVLYFSVHQ---APFYPGT--GASTELGEGEGLGTTINVPLP-ARTGF 231
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ- 308
Y +++ +++P F P +I++SAGFDA DP+G ++ + + + ++++A+
Sbjct: 232 HVYDSIFRQVMVPAMDRFDPQLILVSAGFDAHWDDPIGDMYLSTSAFYQLNRVILEYAER 291
Query: 309 ---GKIVLALEGGYNLGSISNSVLACMNVLL 336
G++++ EGGY++ ++ N V +N L+
Sbjct: 292 ICDGRVIMVQEGGYSISALENCVSTSINQLM 322
>gi|398342792|ref|ZP_10527495.1| acetoin-histone deacetylase [Leptospira inadai serovar Lyme str.
10]
Length = 308
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/325 (37%), Positives = 185/325 (56%), Gaps = 27/325 (8%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
G YD+ +H+T GDYHPE P R++AI N+L + ++ ++ ++++L H
Sbjct: 4 GYAYDDIFLQHDT--GDYHPERPERLEAIMNRLIKTSYFRNLTRISPEKLAEESILPAHD 61
Query: 76 ENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H I K FD + S EAA +AAGS + +A+++ +L
Sbjct: 62 RAHQERFMAIQGKTGGFDGDTP----------FSPKSFEAALIAAGSGVSLAKKILSEDL 111
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
++ A+VRPPGHHAE AMGFCL NN+A+ A +LLN I K+ I+DWDVHHGN T
Sbjct: 112 DAGIALVRPPGHHAETGRAMGFCLLNNIAITAHYLLNRN----IRKVYILDWDVHHGNGT 167
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q++F+ +V F S+H++ FYP + G IG G GLG+ +NVP + ++DYL
Sbjct: 168 QEIFYDSDKVFFASLHQY---PFYPGS--GSAREIGSGQGLGFTLNVPLPS-HSSNSDYL 221
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD--FAQG-K 310
+ ++P +F P+ ++ISAGFDA DPLGG ++ +S + + + F G K
Sbjct: 222 KEFQEKIIPSILEFEPEFLLISAGFDAHKQDPLGGMSLSTNAFSEFTRSVKEAAFQSGSK 281
Query: 311 IVLALEGGYNLGSISNSVLACMNVL 335
I+ LEGGY+L +++ SV A + VL
Sbjct: 282 IISFLEGGYDLQALAESVEAHVAVL 306
>gi|417766121|ref|ZP_12414075.1| histone deacetylase family protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|418670332|ref|ZP_13231703.1| histone deacetylase family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418689537|ref|ZP_13250658.1| histone deacetylase family protein [Leptospira interrogans str.
FPW2026]
gi|418710471|ref|ZP_13271242.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418725219|ref|ZP_13283895.1| histone deacetylase family protein [Leptospira interrogans str. UI
12621]
gi|421128071|ref|ZP_15588289.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421133453|ref|ZP_15593601.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|400351575|gb|EJP03794.1| histone deacetylase family protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400361216|gb|EJP17183.1| histone deacetylase family protein [Leptospira interrogans str.
FPW2026]
gi|409961601|gb|EKO25346.1| histone deacetylase family protein [Leptospira interrogans str. UI
12621]
gi|410022461|gb|EKO89238.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410434538|gb|EKP83676.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410753714|gb|EKR15372.1| histone deacetylase family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410769407|gb|EKR44649.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|456971347|gb|EMG11975.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 313
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 177/320 (55%), Gaps = 26/320 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +Y + HN H EN +R+ A N+L + K+ ++ L +H
Sbjct: 3 TGFIYSQDFLYHNANSTILHYENSDRLLACLNRLHQSSYFNSLFFPEMKKLPNEFLNEIH 62
Query: 75 TENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
++NH+ I+N K+ FDS E S +AY AA S I ++E + G
Sbjct: 63 SQNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANSGIILSEFLISGT 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L N G KI I+DWDVHHGN
Sbjct: 113 IKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNN----GFKKIFIIDWDVHHGNG 168
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++DP + + S+H+ FYP G T G+G G+G N+P + GD Y
Sbjct: 169 TQEIFYEDPNIFYLSIHQF---PFYPMT--GLATETGKGKGIGTTKNIPMQ-VNSGDQAY 222
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
+ + I++P + F PDI++ISAGFDA DPLGG +T G+ + + +++ A
Sbjct: 223 IQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNITTKGFEDLTRIILESADKICS 282
Query: 309 GKIVLALEGGYNLGSISNSV 328
GK++ LEGGY+L ++S SV
Sbjct: 283 GKVLSFLEGGYDLAALSESV 302
>gi|406896137|gb|EKD40515.1| hypothetical protein ACD_75C00026G0007 [uncultured bacterium]
Length = 317
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 179/316 (56%), Gaps = 25/316 (7%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
++ G +YDE+ H+T G YHPE+P R+KAI+ +L +G+ + + A+ A + + +
Sbjct: 2 KKTGFVYDEKYLLHDT--GGYHPESPERLKAIYKRLTESGVLDKLTRIQAERANQRWIEA 59
Query: 73 VHTENHVNLIKN---ISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
VH ++ +F+ + I + + + A+ A G V++ + V
Sbjct: 60 VHAIRYITKFDEACLYGLNEFEHPDNAICRE---------TYDVAFYAVGGVLKAIDAVM 110
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
+GE+++AF VRPPGHHAE D+ MGFC +NNVA+ A +L E GI ++ I+D+DVHH
Sbjct: 111 KGEVDNAFCAVRPPGHHAERDKPMGFCYFNNVAIGARYLQKEH---GITRVGIIDFDVHH 167
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ +F +DP VL++S+H H YP F IGEG GY +N P GR GD
Sbjct: 168 GNGTQHIFDRDPTVLYYSIHEHP-SFAYPGTGRDFELGIGEGE--GYTVNSPVLPGR-GD 223
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY----SVMLKKLMD 305
+Y + L+P K F P+ I++SAGFDA D + G +T GY V++ +
Sbjct: 224 EEYRRLIMQDLVPAFKKFKPEFIMLSAGFDAHESDMMSGTNLTTDGYDFISEVIVNLVNR 283
Query: 306 FAQGKIVLALEGGYNL 321
FA G++V LEGGYNL
Sbjct: 284 FADGRVVSVLEGGYNL 299
>gi|297570602|ref|YP_003691946.1| Histone deacetylase [Desulfurivibrio alkaliphilus AHT2]
gi|296926517|gb|ADH87327.1| Histone deacetylase [Desulfurivibrio alkaliphilus AHT2]
Length = 350
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 199/364 (54%), Gaps = 24/364 (6%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+ R+ +LY E H+ G H E+P R++ ++ L A QR + A + L
Sbjct: 1 MARKTAVLYSEVFLAHDPGPG--HVESPRRLEGLYRLLDAEPQRQRFLFPEFAPADEDTL 58
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
H H+ + + F+ Y + S EAA LAAG+ + + V
Sbjct: 59 ALNHDRRHIARVAKTAGSPFECLDP-------DTYTSARSYEAACLAAGAAVAAVDLVLG 111
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
GE ++AFA+VRPPGHHAE D GFCL+NN+AVAA L G+ ++LIVDWD+HHG
Sbjct: 112 GEADNAFALVRPPGHHAEHDHTSGFCLFNNIAVAARHALKNH---GLERVLIVDWDLHHG 168
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ F+ +VLFFS H++ ++P + G + G+G G GY INVP + G+ DA
Sbjct: 169 NGTQHAFYDTDQVLFFSTHQY---PYFPGS--GALSETGQGAGEGYTINVPLQGGQ-DDA 222
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ-- 308
+ +++ +L+PVA+ + P++I++SAGFD GDPLG V+ GY+ + L+D A
Sbjct: 223 AFARIFNELLIPVAEQYRPELILVSAGFDTYGGDPLGTMMVSEEGYAYLTGVLVDLAAGL 282
Query: 309 --GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFEST--WRVIQAVRKKL 364
G++ L LEGGY+LG + VLAC+ L D+ +A + ++ R ++ R+
Sbjct: 283 CGGRLALMLEGGYDLGIMERGVLACLGELAGDQRLASARRRRLEQAAPPLRALEQAREAA 342
Query: 365 SAFW 368
+W
Sbjct: 343 KKYW 346
>gi|421114631|ref|ZP_15575046.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410013813|gb|EKO71889.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 313
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 176/320 (55%), Gaps = 26/320 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +Y + HN H EN +R+ A N+L + K+ ++ L +H
Sbjct: 3 TGFIYSQDFLYHNANSTIPHYENSDRLLACLNRLHQSSYFNSLFFPEMKKFPNEFLNEIH 62
Query: 75 TENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
++NH+ I+N K+ FDS E S +AY AA S I ++E + G
Sbjct: 63 SQNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANSGIILSEFLISGT 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L N G KI I+DWDVHHGN
Sbjct: 113 IKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNN----GFKKIFIIDWDVHHGNG 168
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++DP + + S+H+ FYP G T G+G G+G N+P + GD Y
Sbjct: 169 TQEIFYEDPNIFYLSIHQF---PFYPMT--GLATETGKGKGIGTTKNIPMQ-VNSGDQAY 222
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS----VMLKKLMDFAQ 308
+ + I++P + F PDI++ISAGFDA DPLGG +T G+ ++L+ +
Sbjct: 223 IQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNITTKGFEDLTRIILESVDKICS 282
Query: 309 GKIVLALEGGYNLGSISNSV 328
GK++ LEGGY+L ++S SV
Sbjct: 283 GKVLSFLEGGYDLAALSESV 302
>gi|45658561|ref|YP_002647.1| acetoin-histone deacetylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417761510|ref|ZP_12409519.1| histone deacetylase family protein [Leptospira interrogans str.
2002000624]
gi|417775766|ref|ZP_12423615.1| histone deacetylase family protein [Leptospira interrogans str.
2002000621]
gi|417784566|ref|ZP_12432272.1| histone deacetylase family protein [Leptospira interrogans str.
C10069]
gi|418674690|ref|ZP_13235989.1| histone deacetylase family protein [Leptospira interrogans str.
2002000623]
gi|418701546|ref|ZP_13262471.1| histone deacetylase family protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|418729578|ref|ZP_13288125.1| histone deacetylase family protein [Leptospira interrogans str. UI
12758]
gi|421085449|ref|ZP_15546302.1| histone deacetylase family protein [Leptospira santarosai str.
HAI1594]
gi|421103681|ref|ZP_15564278.1| histone deacetylase family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45601805|gb|AAS71284.1| acetoin- histone deacetylase family [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|409942591|gb|EKN88199.1| histone deacetylase family protein [Leptospira interrogans str.
2002000624]
gi|409952383|gb|EKO06896.1| histone deacetylase family protein [Leptospira interrogans str.
C10069]
gi|410366644|gb|EKP22035.1| histone deacetylase family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410432085|gb|EKP76443.1| histone deacetylase family protein [Leptospira santarosai str.
HAI1594]
gi|410574414|gb|EKQ37447.1| histone deacetylase family protein [Leptospira interrogans str.
2002000621]
gi|410578349|gb|EKQ46211.1| histone deacetylase family protein [Leptospira interrogans str.
2002000623]
gi|410759628|gb|EKR25840.1| histone deacetylase family protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410775756|gb|EKR55747.1| histone deacetylase family protein [Leptospira interrogans str. UI
12758]
gi|455791354|gb|EMF43170.1| histone deacetylase family protein [Leptospira interrogans serovar
Lora str. TE 1992]
gi|456824751|gb|EMF73177.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. LT1962]
gi|456982662|gb|EMG19194.1| histone deacetylase family protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 313
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 177/320 (55%), Gaps = 26/320 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +Y + HN H EN +R+ A N+L + K+ ++ L +H
Sbjct: 3 TGFIYSQDFLYHNANSTIPHYENSDRLLACLNRLHQSSYFNSLFFPEMKKLPNEFLNEIH 62
Query: 75 TENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
++NH+ I+N K+ FDS E S +AY AA S I ++E + G
Sbjct: 63 SQNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANSGIILSEFLISGT 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L N G KI I+DWDVHHGN
Sbjct: 113 IKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNN----GFKKIFIIDWDVHHGNG 168
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++DP + + S+H+ FYP G T G+G G+G N+P + GD Y
Sbjct: 169 TQEIFYEDPNIFYLSIHQF---PFYPMT--GLATETGKGKGIGTTKNIPMQ-VNSGDQAY 222
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
+ + I++P + F PDI++ISAGFDA DPLGG +T G+ + + +++ A
Sbjct: 223 IQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNITTKGFEDLTRIILESADKICS 282
Query: 309 GKIVLALEGGYNLGSISNSV 328
GK++ LEGGY+L ++S SV
Sbjct: 283 GKVLSFLEGGYDLAALSESV 302
>gi|297709231|ref|XP_002831341.1| PREDICTED: histone deacetylase 10 isoform 1 [Pongo abelii]
Length = 646
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 189/358 (52%), Gaps = 29/358 (8%)
Query: 16 GLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
L+Y E M D + E P R+ A ++L+ G+ QRC++L+A+EA ++ L V
Sbjct: 4 ALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLLLSAREASEEELGLV 63
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+ +V+L++ A + + + A LAAG+ +++ + V G +
Sbjct: 64 HSPEYVSLVRETQVLXXXHMHVLCAQGVICALHPQSTFHCARLAAGAGLQLVDAVLTGAV 123
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ A+VRPPGHH++ A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 124 QNGLALVRPPGHHSQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQGI 180
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F DP +L+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY+
Sbjct: 181 QYLFEDDPSILYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYV 240
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
A + H+LLP+A F P TP ++ + + L A G++
Sbjct: 241 AAFLHLLLPLA--FEP----------------------TPECFAHLTQLLQVLAGGRVCA 276
Query: 314 ALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 277 VLEGGYHLESLAESVCMTVQTLLGDPAPPLSGSMVPCQSALESIQSARAAQAPHWKSL 334
>gi|417772111|ref|ZP_12420001.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|418680417|ref|ZP_13241666.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|418707007|ref|ZP_13267844.1| histone deacetylase family protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|400327775|gb|EJO80015.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|409946068|gb|EKN96082.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|410763358|gb|EKR34088.1| histone deacetylase family protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|455667658|gb|EMF32954.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Fox 32256]
Length = 313
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 177/320 (55%), Gaps = 26/320 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +Y + HN H EN +R+ A N+L + K+ ++ L +H
Sbjct: 3 TGFIYSQDFLYHNANSTIPHYENSDRLLACLNRLHQSSYFNSLFFPEMKKFPNEFLNEIH 62
Query: 75 TENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
++NH+ I+N K+ FDS E S +AY AA S I ++E + G
Sbjct: 63 SQNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANSGIILSEFLISGT 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L N G KI I+DWDVHHGN
Sbjct: 113 IKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNN----GFKKIFIIDWDVHHGNG 168
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++DP + + S+H+ FYP G T G+G G+G N+P + GD Y
Sbjct: 169 TQEIFYEDPNIFYLSIHQF---PFYPMT--GLATETGKGKGIGTTKNIPMQ-VNSGDQAY 222
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
+ + I++P + F PDI++ISAGFDA DPLGG +T G+ + + +++ A
Sbjct: 223 IQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNITTKGFEDLTRIILESADKICS 282
Query: 309 GKIVLALEGGYNLGSISNSV 328
GK++ LEGGY+L ++S SV
Sbjct: 283 GKVLSFLEGGYDLAALSESV 302
>gi|398346206|ref|ZP_10530909.1| acetoin-histone deacetylase [Leptospira broomii str. 5399]
Length = 339
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 189/336 (56%), Gaps = 27/336 (8%)
Query: 5 SGEGRTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKE 64
S + R + G Y++ +H+T G+YHPE P R++AI N+L + ++ ++
Sbjct: 24 SKKNRRKQMNFGYAYEDIFLQHDT--GEYHPERPERLEAIMNRLIKTSYFKNLTHISPEK 81
Query: 65 AKDKNLLSVHTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVI 122
++ +LS H + I K+ FD + S EAA LAAGS +
Sbjct: 82 LPEELILSAHNRTYQERFVAIEGKRGGFDGDTP----------FSPKSFEAALLAAGSGV 131
Query: 123 EVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILI 182
+A+++ +L+S A++RPPGHHAE AMGFCL NN+A+ A +LLN I ++ I
Sbjct: 132 SLAKQILSEDLDSGIALIRPPGHHAETGRAMGFCLLNNIAITAHYLLNRN----IRRVYI 187
Query: 183 VDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW 242
+DWDVHHGN TQ++F+ +V F S+H++ FYP + G IG G GLG+ +N+P
Sbjct: 188 LDWDVHHGNGTQEIFYDSDKVFFTSLHQY---PFYPGS--GSAREIGSGQGLGFTLNIPL 242
Query: 243 ENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS---VM 299
G ++DYL + ++P +F P+ ++ISAGFDA DPLGG ++ +S +
Sbjct: 243 P-GSSSNSDYLQAFQEKVIPSILEFEPEFLLISAGFDAHKQDPLGGMSLSTNAFSEFTRL 301
Query: 300 LKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
K+ + KI+ LEGGY+L +++ SV A + VL
Sbjct: 302 AKEAASQSGSKIISFLEGGYDLQALAESVEAHIAVL 337
>gi|435851061|ref|YP_007312647.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methanomethylovorans hollandica DSM 15978]
gi|433661691|gb|AGB49117.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methanomethylovorans hollandica DSM 15978]
Length = 636
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 178/312 (57%), Gaps = 21/312 (6%)
Query: 14 RVGLLYDERMCKH---NTPDGDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAK-EAKDK 68
+V +LY E H NT D E P R+ + LQ +G+ +RC ++ K A ++
Sbjct: 283 KVAVLYSEAHVAHSPKNTSVQDL--ERPERLTRAMDYLQRSGVFGERCDLITEKYPASEE 340
Query: 69 NLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
+LL VH+ +++ +++ S+ D S Y+ + E A LA GS I+ E V
Sbjct: 341 DLLLVHSNDYIRFVRSYSASGGGFLGD-------STYMTSETFEVARLAVGSAIKAGELV 393
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
G+ +A ++RPPGHHA D+ GFC++NNVAV A +L ++ G++KI+I+DWD H
Sbjct: 394 LSGQYAAAMVMIRPPGHHASVDKYRGFCIFNNVAVLARYLQKKK---GLSKIMIIDWDAH 450
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
G+ T ++F+ DP V+F S+HR + FYP GF + IGEGPGLGY +NV G G
Sbjct: 451 AGDGTMEIFYNDPTVMFVSLHRDPY-DFYPRR--GFSSQIGEGPGLGYTVNVEIPVG-AG 506
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
D +Y +D +++P+ +F PD +I S GFDA + +T GY +M +K+M
Sbjct: 507 DEEYAFAFDELVIPLLHNFSPDFVICSCGFDAYYKEQHIKLNLTSAGYHMMTQKIMSAIN 566
Query: 309 GKIVLALEGGYN 320
G VL +EGGY+
Sbjct: 567 GNFVLVMEGGYH 578
>gi|403354151|gb|EJY76626.1| Putative histone deacetylase HDAC6 protein [Oxytricha trifallax]
Length = 416
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 184/346 (53%), Gaps = 30/346 (8%)
Query: 18 LYDERMCKH----------NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAK--EA 65
+YDERM KH +T +PE P+RI +I+N L+ G+ + L + +
Sbjct: 19 VYDERMLKHREYPKPQAEGSTVKVHVNPEIPDRISSIYNHLKIEGLLDQMDKLEVQGVDE 78
Query: 66 KDKNLLSVHTENHVNLIKNISSKQFDSRRD-RIASKLNSIYLNEGSSEAAYLAAGSVIEV 124
++ + ++H++ ++ +K +K D I + +Y + EAA ++A S I
Sbjct: 79 VEQLIATIHSQEIIDKVKEACAKLGDEESSSEIHTATGELYECRETWEAAKVSAASAITG 138
Query: 125 AERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVD 184
+ + +G+ + + I+RPPGHHA GFC +NNVA+AA L++ L ++LI D
Sbjct: 139 VKDILDGKHDKGYCIIRPPGHHAYHSHQAGFCFFNNVAIAAKVALSDPYNL--KRVLIFD 196
Query: 185 WDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN 244
WD+HHG+ TQ +F+ D RVLF S+HR + TFYP + +GEG G G+NINV WE
Sbjct: 197 WDIHHGDGTQALFYDDERVLFVSLHRTDNLTFYPGYKECLPEYVGEGKGKGFNINVAWET 256
Query: 245 G--------------RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCR 290
G G+ DY D +L P+ + F P++IIIS GFD+A D LG
Sbjct: 257 GLVVDEVDRSNNKVSTLGNNDYRYACDTLLFPIVEQFNPELIIISCGFDSAIHDFLGFSN 316
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VTP Y M +KL + K+++ EGGYN+ + +N LL
Sbjct: 317 VTPLMYQYMTQKLSSYCP-KLLVVQEGGYNVNYLGQHAQGVVNGLL 361
>gi|421121713|ref|ZP_15582006.1| histone deacetylase family protein [Leptospira interrogans str.
Brem 329]
gi|410345564|gb|EKO96660.1| histone deacetylase family protein [Leptospira interrogans str.
Brem 329]
Length = 313
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 176/320 (55%), Gaps = 26/320 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +Y + HN H EN +R+ A N+L + K+ ++ L +H
Sbjct: 3 TGFIYSQDFLYHNANSTILHYENSDRLLACLNRLHQSSYFNSLFFPEMKKLPNEFLNEIH 62
Query: 75 TENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
++NH+ I+N K+ FDS E S +AY AA S I ++E + G
Sbjct: 63 SQNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANSGIILSEFLISGT 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + F+++RPP HHAE + MGFC+ NNVA+ A +L N G KI I+DWDVHHGN
Sbjct: 113 IKNGFSLLRPPDHHAEHNRIMGFCMLNNVAITARYLQNN----GFKKIFIIDWDVHHGNG 168
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++DP + + S+H+ FYP G T G+G G+G N+P + GD Y
Sbjct: 169 TQEIFYEDPNIFYLSIHQF---PFYPMT--GLATETGKGKGIGTTKNIPMQ-VNSGDQAY 222
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
+ + I++P + F PDI++ISAGFDA DPLGG +T G+ + + +++ A
Sbjct: 223 IQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNITTKGFEDLTRIILESADKICS 282
Query: 309 GKIVLALEGGYNLGSISNSV 328
GK++ LEGGY+L ++S SV
Sbjct: 283 GKVLSFLEGGYDLAALSESV 302
>gi|145529095|ref|XP_001450336.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417947|emb|CAK82939.1| unnamed protein product [Paramecium tetraurelia]
Length = 645
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 184/352 (52%), Gaps = 20/352 (5%)
Query: 34 HPENPNRI----KAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS-VHTENHVNLIKNISSK 88
H ENP R K I N L + + + L+ E D N L VH E +++ ++ + +
Sbjct: 35 HCENPQRTQSIDKTIQNYLSSKDLKNKVEQLSQFEQCDINHLRLVHDEKYIDFVEGLFNA 94
Query: 89 QFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHA- 147
+ + + + YL + S+ A +V+E +++ + E + F VRPPGHH+
Sbjct: 95 VGNEQLTKDVKYFDDTYLCKTSAVTARKCVQAVLEGVDKILKAEWRNGFCSVRPPGHHSG 154
Query: 148 EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFS 207
++ GFC+YNNVAVAA + R + +NKI+I DWDVHH + T+ +F++DP L S
Sbjct: 155 HKNKPNGFCVYNNVAVAAKY---ARAKYNVNKIVIFDWDVHHCDGTESIFYEDPNTLVIS 211
Query: 208 VHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW-------ENGRCGDADYLAVWDHIL 260
+HR++ G+FYP + D IG NINV W +N G DY+ +D +L
Sbjct: 212 IHRYDGGSFYPGSGDP--VKIGRKDAEYKNINVGWNVGWNVKDNDAPGYDDYVYAYDRLL 269
Query: 261 LPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYN 320
P+ K+FGPD IIISAG+D+A GDPLGG TP GY M +KL +++ LEGGYN
Sbjct: 270 GPIIKEFGPDFIIISAGYDSAKGDPLGGINNTPQGYQYMTEKLQQLCP-RVLAVLEGGYN 328
Query: 321 LGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
L + LA LL P + P + +Q K FW L+
Sbjct: 329 LDITAQCALATFEQLL-GVPKQFPAIIQPGQCGINAVQTTVDKHKQFWTCLS 379
>gi|393758565|ref|ZP_10347385.1| histone deacetylase superfamily protein [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
gi|393163001|gb|EJC63055.1| histone deacetylase superfamily protein [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
Length = 369
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 174/293 (59%), Gaps = 19/293 (6%)
Query: 33 YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS-KQFD 91
+H +P+ + + A+G + AK A+DK++L VHT H+ +K +S+
Sbjct: 35 HHLAHPDTKRRFHELVCASGQIDHLTSIQAKPARDKDILRVHTAEHLENMKRVSALPTGG 94
Query: 92 SRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDE 151
D I + + G E A L+AG IE+ ++V E+++ +A+V PPGHHA
Sbjct: 95 DTGDGITT------MGNGGLEIAMLSAGGAIELVKKVVSREVSNGYALVNPPGHHAPRAG 148
Query: 152 AMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH 211
AMGFC++NN +VAA++ R ELG++++ I+DWDVHHGN TQ ++W DP VL S+H+H
Sbjct: 149 AMGFCIFNNTSVAAAY---AREELGLDRVAILDWDVHHGNGTQDIWWNDPSVLTISLHQH 205
Query: 212 EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
+PAN GF T GEG GLGYN+N+P G G+A YL + ++LP + + P +
Sbjct: 206 ---LCFPAN-SGFTTERGEGGGLGYNLNIPLPPG-GGNAAYLYAMEKVVLPALRSYKPQL 260
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYN 320
II+ +GFDA+ DPL VT G+ M ++++D A +G+I EGGY+
Sbjct: 261 IIVGSGFDASMMDPLARMMVTASGFRQMARQIIDCAEEVCEGRIAFVQEGGYS 313
>gi|289549122|ref|YP_003474110.1| histone deacetylase [Thermocrinis albus DSM 14484]
gi|289182739|gb|ADC89983.1| Histone deacetylase [Thermocrinis albus DSM 14484]
Length = 309
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 179/328 (54%), Gaps = 25/328 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R G LYD+ +HN HPEN +R+ AI L++ + Q+ V + + A + +
Sbjct: 2 RTGFLYDDIYLEHNNRG---HPENKDRLIAIMQGLESRRLFQKVVKVRPRRATVQEVSLN 58
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
H ++ I + + L+ Y N S E A A G V+E +R+ GE
Sbjct: 59 HDLAYIQEIHDFCAAG--------GGYLDPDTYANAMSYEVALYAVGGVLEGIDRLLNGE 110
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
L + F VRPPGHHAE +AMGFC++NNVAV A +L+N GI K+ I+D+D HHGN
Sbjct: 111 LEAVFCAVRPPGHHAERSKAMGFCIFNNVAVGAHYLINR----GIKKVFIIDFDAHHGNG 166
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ+ F++D RV +FS H + FYP G G G G G+ NVP + G GD +Y
Sbjct: 167 TQRSFYEDDRVFYFSTHEY---PFYPGT--GSADERGAGRGYGFTYNVPMKAG-AGDEEY 220
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG--- 309
L V+ IL + KDF P+ +++SAG+D DPL VT G ++ +++ ++
Sbjct: 221 LRVYKEILPALVKDFKPEFLLVSAGYDLHKDDPLTYLDVTTEGIREIVSSIVNVSKALSI 280
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLE 337
++LALEGGYNL +S V + +LLE
Sbjct: 281 PLLLALEGGYNLRVLSECVADTLEILLE 308
>gi|373458090|ref|ZP_09549857.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
gi|371719754|gb|EHO41525.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
Length = 314
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 183/326 (56%), Gaps = 24/326 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R+ +++ +HN G HPE P R+KAI + L R EA ++ L +
Sbjct: 3 RLAIIFHPLFLEHNPGIG--HPERPERLKAILDYLNEKNFLNRVDQFQPSEASEEALRLI 60
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H ++H++ IKN + K+ + + L++ S AA AAG+ E V +
Sbjct: 61 HDQSHIDFIKNQAGKE------GVTLDVGDTVLSKHSVGAALHAAGAGARALELVFKEGY 114
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ FA VRPPGHHAE AMGFC++NNVA+AA L +R + KILI+DWDVHHGN T
Sbjct: 115 DKVFAAVRPPGHHAERSRAMGFCVFNNVAIAAR--LAQREKFA-EKILIIDWDVHHGNGT 171
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F++DP V +FS+H++ +P G G GPG G+ +NVP G+ GDA+Y+
Sbjct: 172 QHAFYEDPTVFYFSLHQY---PLFPMT--GLREETGSGPGKGFTLNVPLSYGQ-GDAEYV 225
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----G 309
+ L + F PD+I+ISAGFDA DP+GG R+T G+ + + + FA G
Sbjct: 226 EHVERSLAAIESRFKPDLILISAGFDAHVKDPIGGMRLTTAGFYKLTEMVAQFANRYCTG 285
Query: 310 KIVLALEGGYNLGSISNSV---LACM 332
+I+ LEGGY+L +++ SV L CM
Sbjct: 286 RIISFLEGGYHLNALAESVHQHLVCM 311
>gi|403372695|gb|EJY86252.1| Putative histone deacetylase HDAC6 protein [Oxytricha trifallax]
Length = 416
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 184/346 (53%), Gaps = 30/346 (8%)
Query: 18 LYDERMCKH----------NTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAK--EA 65
+YDERM KH +T +PE P+RI +I+N L+ G+ + L + +
Sbjct: 19 VYDERMLKHREYPKPQAEGSTVKVHVNPEIPDRISSIYNHLKIEGLLDQMDKLEVQGVDE 78
Query: 66 KDKNLLSVHTENHVNLIKNISSKQFDSRRD-RIASKLNSIYLNEGSSEAAYLAAGSVIEV 124
++ + ++H++ ++ +K +K D I + +Y + EAA ++A S I
Sbjct: 79 VEQLIATIHSQEIIDKVKEACAKLGDEESSSEIHTATGELYECRETWEAAKVSAASAITG 138
Query: 125 AERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVD 184
+ + +G+ + + I+RPPGHHA GFC +NNVA+AA L++ L ++LI D
Sbjct: 139 VKDILDGKHDKGYCIIRPPGHHAYHSHQAGFCFFNNVAIAAKVALSDPYNL--KRVLIFD 196
Query: 185 WDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN 244
WD+HHG+ TQ +F+ D RVLF S+HR + TFYP + +GEG G G+NINV WE
Sbjct: 197 WDIHHGDGTQALFYDDERVLFVSLHRTDNLTFYPGYKECLPEYVGEGKGKGFNINVAWET 256
Query: 245 G--------------RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCR 290
G G+ DY D +L P+ + F P++IIIS GFD+A D LG
Sbjct: 257 GLVVDNYDRSNNKVSTLGNNDYRYACDTLLFPIVEQFNPELIIISCGFDSAIHDFLGFSN 316
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL 336
VTP Y M +KL + K+++ EGGYN+ + +N LL
Sbjct: 317 VTPLVYQYMTQKLASYCP-KLLVIQEGGYNVNYLGQHAQGVVNGLL 361
>gi|424775508|ref|ZP_18202501.1| histone deacetylase superfamily protein [Alcaligenes sp. HPC1271]
gi|422889218|gb|EKU31598.1| histone deacetylase superfamily protein [Alcaligenes sp. HPC1271]
Length = 369
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 174/293 (59%), Gaps = 19/293 (6%)
Query: 33 YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS-KQFD 91
+H +P+ + + A+G + AK A+DK++L VHT H+ +K +S+
Sbjct: 35 HHLAHPDTKRRFHELVCASGQIDHLTSIQAKPARDKDILRVHTAEHLENMKRVSALPTGG 94
Query: 92 SRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDE 151
D I + + G E A L+AG IE+ ++V E+++ +A+V PPGHHA
Sbjct: 95 DTGDGITT------MGNGGLEIAMLSAGGAIEMVKKVVSREVSNGYALVNPPGHHAPRAG 148
Query: 152 AMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH 211
AMGFC++NN +VAA++ R ELG++++ I+DWDVHHGN TQ ++W DP VL S+H+H
Sbjct: 149 AMGFCIFNNTSVAAAY---AREELGLDRVAILDWDVHHGNGTQDIWWNDPSVLTISLHQH 205
Query: 212 EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
+PAN GF T GEG GLGYN+N+P G G+A YL + ++LP + + P +
Sbjct: 206 ---LCFPAN-SGFTTERGEGEGLGYNLNIPLPPGG-GNAAYLYAMEKVVLPALRAYKPQL 260
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYN 320
II+ +GFDA+ DPL VT G+ M ++++D A +G+I EGGY+
Sbjct: 261 IIVGSGFDASMMDPLARMMVTASGFRQMARQIIDCAEEVCEGRIAFVQEGGYS 313
>gi|398339945|ref|ZP_10524648.1| acetoin-histone deacetylase [Leptospira kirschneri serovar Bim str.
1051]
gi|421130519|ref|ZP_15590713.1| histone deacetylase family protein [Leptospira kirschneri str.
2008720114]
gi|410358218|gb|EKP05399.1| histone deacetylase family protein [Leptospira kirschneri str.
2008720114]
Length = 347
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 181/330 (54%), Gaps = 26/330 (7%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K G +Y + HN H EN +R+ A NKL + K+ ++ L
Sbjct: 34 KMPTGFIYSQDFLYHNANFVIPHYENSDRLLACLNKLHQSSYFGSLFFPEMKKFPNEFLN 93
Query: 72 SVHTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+H++NH+ I+N K+ FDS E S +AY AA S I ++E +
Sbjct: 94 EIHSKNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANSGIILSESLI 143
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
G + + F+++RPPGHHAE + MGFC+ NNVA+ A +L N G KI I+DWDVHH
Sbjct: 144 SGTIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNN----GYKKIFIIDWDVHH 199
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ++F++DP + + S+H+ FYP G T G+G G+G N+P +
Sbjct: 200 GNGTQEIFYEDPNIFYLSIHQF---PFYPMT--GLITETGKGKGIGTTKNIPMQANSENQ 254
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ- 308
A Y+ + I++P + F PDI++ISAGFDA DPLGG VT G+ + + +++ A
Sbjct: 255 A-YIQKFKEIVVPTMERFDPDIVLISAGFDAHKDDPLGGMNVTTKGFEDLTRIILESADR 313
Query: 309 ---GKIVLALEGGYNLGSISNSVLACMNVL 335
GK++ LEGGY+L ++S SV A + VL
Sbjct: 314 ICGGKVLSFLEGGYDLTALSESVEAHIAVL 343
>gi|328953739|ref|YP_004371073.1| histone deacetylase superfamily protein [Desulfobacca acetoxidans
DSM 11109]
gi|328454063|gb|AEB09892.1| histone deacetylase superfamily [Desulfobacca acetoxidans DSM
11109]
Length = 320
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 180/332 (54%), Gaps = 25/332 (7%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+K G +YDER KH G YHPE P+R++AI ++ ++G+ V++ EA +
Sbjct: 1 MKANTGYVYDERYLKHEP--GGYHPERPDRLRAIQQRVISSGLIDELVLIQPYEAPLDRI 58
Query: 71 LSVHTENHVNLIKNISSKQ---FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAER 127
+H +++ + K+ F S + I + +I A LA G V+ +
Sbjct: 59 TRLHDPDYLERFRLACEKKMRIFQSPDNGICADSYAI---------ALLAVGGVLAACDA 109
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
V G+ ++AF VRPPGHHAE +AMGFC +NN+A+ A +L + + G+ +I I+DWDV
Sbjct: 110 VMTGKAHNAFCAVRPPGHHAEHAQAMGFCFFNNIAIGARYLQD---KYGLERIAILDWDV 166
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ +F DP V + S+H+ F T YP G G+G GLG+ +N P G
Sbjct: 167 HHGNGTQHLFETDPTVFYISLHQDPF-TCYPGT--GRQNEQGKGAGLGFTLNFPLPRGS- 222
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GD YL ++P F PD ++IS+GFDA A DPL ++ GY+ M + + FA
Sbjct: 223 GDKTYLKTIQEGVIPALVAFHPDFLMISSGFDAHADDPLAHMELSRDGYAHMGRLMAAFA 282
Query: 308 Q----GKIVLALEGGYNLGSISNSVLACMNVL 335
Q +I+ LEGGYNL + V + +L
Sbjct: 283 QEHCNSRIITVLEGGYNLEVLQECVEDHLRIL 314
>gi|428183437|gb|EKX52295.1| hypothetical protein GUITHDRAFT_65370 [Guillardia theta CCMP2712]
Length = 315
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 172/292 (58%), Gaps = 25/292 (8%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
HPE P R+ +W +++ GI C VL + A+DK + VH +N+V I + S + D
Sbjct: 2 HPECPQRVDRMWEEMRKQGIADSCTVLENRLAEDKEIELVHDKNYVESILS-GSPEIDG- 59
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGS---VIEVAERVAEGELNSAFAIVRPPGHHAEPD 150
S Y ++ S +A A + VI+ E V +GE ++F VRPPGHHAE D
Sbjct: 60 ---------STYFHKKDSASANAARSAAGAVIDAVEAVCKGEARNSFCAVRPPGHHAERD 110
Query: 151 EAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHR 210
MGFC++N+VA+AA + + G NK+LI DWDVHHGN Q +F++DP VL+ S+HR
Sbjct: 111 RMMGFCIFNSVAIAAE---KAKKDWGCNKVLIFDWDVHHGNGIQHIFYEDPSVLYISIHR 167
Query: 211 --HEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFG 268
+ FYP G +G G G G+N+N+P E GD Y + I+LP+A F
Sbjct: 168 GGMDKSFFYPTT--GTAGEVGRGEGRGFNVNIPVEFPGVGDPVYSVAMERIVLPIAHAFK 225
Query: 269 PDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALE 316
PDI+I+SAG+DAA GDPLGG V+P + M K++M+ A GKIVLALE
Sbjct: 226 PDIVIVSAGYDAAGGDPLGGMNVSPAMFRKMTKQMMEVANQHCDGKIVLALE 277
>gi|403222692|dbj|BAM40823.1| uncharacterized protein TOT_030000085 [Theileria orientalis strain
Shintoku]
Length = 840
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 207/425 (48%), Gaps = 89/425 (20%)
Query: 32 DYHPENPNRIKAIWNKLQAAGI-----PQRCV-----VLNAKEAKDKNLLSVHTENHVNL 81
DYH E P R+++I ++ + I P C+ ++ EA +LL HT+N++N
Sbjct: 30 DYHVETPKRVRSILKTIRESEIVIDSGPGCCLWDLLQPVDCTEASTSSLLLCHTKNYLNQ 89
Query: 82 IKNISSK--QFDSRRDRIASKLNSI---------YLNEGSSEAAYLAAGSVIEVAERVAE 130
I + + + SRR + + ++ Y+ S A LA G ++E+ +
Sbjct: 90 ISYWTKQLVRLTSRRTQSHNHERTLFMYPLDIETYMTPKSETVAKLAVGGLLELCNIIMR 149
Query: 131 ----------------------------------------------GELNSAFAIVRPPG 144
G FAIVRPPG
Sbjct: 150 STGHVSGPRSLKILFSKESINHVLVKQESGENVSSKNETSKSESHSGSTQKGFAIVRPPG 209
Query: 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVL 204
HHA PD+ MGFC++NNVA+AA L + G+ ++ IVDWDVHHGN TQ +F+ D V
Sbjct: 210 HHATPDKMMGFCIFNNVAIAARHLQRKH---GLRRVAIVDWDVHHGNGTQDIFYDDDSVC 266
Query: 205 FFSVHRH--EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLP 262
F S+HR+ E +FYP G+ IG G G YN+N+P E G ++D + ++ +++P
Sbjct: 267 FISLHRYGTEEESFYPYT--GYCDEIGVGKGCKYNVNIPLEKG-FTNSDLVHCFNRVVVP 323
Query: 263 VAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGG 318
V + F P+ II+SAGFDAA D LGGC + GYS +L + A+ G+++L+LEGG
Sbjct: 324 VLQRFKPEFIIVSAGFDAAKDDLLGGCNLDKEGYSWATAQLCELAEKHCKGRLLLSLEGG 383
Query: 319 YNLGSISNSVLACMNVLLEDKPVAGSSEAY--------PFESTWRVIQAVRKKLSAFWPT 370
Y L +S V A + L+ + G+ + Y F+ST V +RK L
Sbjct: 384 YTLHRLSEDVEAVIKTLVTYEYRFGNQQQYVIECTDDHVFDSTVSVCNKLRKLLD--LDD 441
Query: 371 LADEL 375
+ADEL
Sbjct: 442 IADEL 446
>gi|418677399|ref|ZP_13238675.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400322347|gb|EJO70205.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 347
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 180/330 (54%), Gaps = 26/330 (7%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K G +Y + HN H EN +R+ A NKL + K+ ++ L
Sbjct: 34 KMPTGFIYSQDFLYHNANFVIPHYENSDRLLACLNKLHQSSYFGSLFFPEMKKFPNEFLN 93
Query: 72 SVHTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+H++NH+ I+N K+ FDS E S +AY AA S I ++E +
Sbjct: 94 EIHSKNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANSGIILSESLI 143
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
G + + F+++RPPGHHAE + MGFC+ NNVA+ A +L N G KI I+DWDVHH
Sbjct: 144 SGTIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNN----GYKKIFIIDWDVHH 199
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ++F++DP + + S+H+ FYP G T G+G G+G N+P +
Sbjct: 200 GNGTQEIFYEDPNIFYLSIHQF---PFYPMT--GLITETGKGKGIGTTKNIPMQANSENQ 254
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ- 308
A Y+ + I++P + F PDI++ISAGFDA DPLGG VT G+ + + +++ A
Sbjct: 255 A-YIQKFKEIVVPTMERFDPDIVLISAGFDAHKDDPLGGMNVTTKGFEDLTRIILESADR 313
Query: 309 ---GKIVLALEGGYNLGSISNSVLACMNVL 335
GK++ LEGGY+L ++S SV + VL
Sbjct: 314 ICGGKVLSFLEGGYDLTALSESVETHIAVL 343
>gi|149375683|ref|ZP_01893452.1| histone deacetylase superfamily protein [Marinobacter algicola
DG893]
gi|149360085|gb|EDM48540.1| histone deacetylase superfamily protein [Marinobacter algicola
DG893]
Length = 368
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/351 (39%), Positives = 185/351 (52%), Gaps = 46/351 (13%)
Query: 12 KRRVGLLYDERMCKHNTPDGDY-----------------------HPENPNRIKAIWNKL 48
+R V + YDER+ H+ PD + +PE+P RI AI + L
Sbjct: 4 QRDVTVFYDERVLAHH-PDTNMDFLPGRLDKRVRSILSGLNVQWKYPEHPGRITAIMDLL 62
Query: 49 QAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE 108
IP + K A L VHT + ++ I F R + +++ ++
Sbjct: 63 AREPIPG-VRIEPGKAATPDQLRRVHTTSFLDDI-------FSLRDESAWLDVDTTAVSP 114
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL 168
GS EAA +AAG+ I E V EG NSAFA+VRPPGHHAEP A GFCL+NNVAVAA+
Sbjct: 115 GSVEAAEVAAGTAIAAVEAVVEGRTNSAFAMVRPPGHHAEPVRARGFCLFNNVAVAAAHA 174
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
ELG ++LIVDWD HHGN TQ +FW DP +FF +HR FYP + G T +
Sbjct: 175 QA---ELGCERVLIVDWDAHHGNGTQDIFWADPDTMFFDIHRA--APFYPGS--GALTDV 227
Query: 229 GEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGG 288
G G G G INVP G GD YL IL+P A F PD++++SAGFDA D
Sbjct: 228 GAGLGEGTTINVPMPGG-AGDVAYLKALREILVPAADYFKPDLVLVSAGFDAHWYDL--A 284
Query: 289 CRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGSISNSVLACMNVL 335
V+ G++ M + + A G++ + LEGGYN S+S+ V A + L
Sbjct: 285 LNVSYEGFAAMTGIVQEIADKHCNGRLAMVLEGGYNTESLSHGVHAVLRAL 335
>gi|340355419|ref|ZP_08678106.1| histone deacetylase [Sporosarcina newyorkensis 2681]
gi|339622506|gb|EGQ27026.1| histone deacetylase [Sporosarcina newyorkensis 2681]
Length = 394
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 197/389 (50%), Gaps = 45/389 (11%)
Query: 11 IKRRVGLLYDERMCKHNT-------PDGDY--------HPENPNRIKAIWNKLQAAGIPQ 55
I+ G ++DE H+ P G Y HPE R+ N L G+ +
Sbjct: 19 IQMGTGYIFDESYFWHDNGSGTLYLPSGGYMQTDVFVEHPETKRRVN---NLLARCGLMK 75
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ + + A + + H +V +K +S D + GS E A
Sbjct: 76 KLEQIEPRSATKEEIEYFHAPEYVERVKKLSDTTGGDAGDHAI-------VGRGSYEIAL 128
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+ G + + V EGE+N+ +A+ RPPGHHAE ++ +GFC++NNVA+AA + R +
Sbjct: 129 LSTGGALRAVDAVMEGEVNNVYAMTRPPGHHAEREKGIGFCIFNNVAIAAQY---ARKKY 185
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
G+ ++L++DWDVHHGN T++ F++DP VLFFS+H+H +P N+ GF +G G G
Sbjct: 186 GLKRVLVLDWDVHHGNGTEQAFYEDPNVLFFSIHQH---LSFP-NNTGFKEDVGAVAGRG 241
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
YN+N+P G GDA Y+ + I+ P+A +F P+++IISAG D DPLG +T G
Sbjct: 242 YNVNIPLPPG-TGDAGYVHAFKSIVEPIAAEFKPELVIISAGQDPGMFDPLGRMMMTAEG 300
Query: 296 YS----VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL--LEDK---PVAGSSE 346
+ ML+ + GKIV EGGY+ + L + L +E P A S+
Sbjct: 301 FGQLTDCMLRIADTYCDGKIVFCHEGGYSNAYVPFCTLKIIERLSGIETNVTDPYASGSQ 360
Query: 347 AYP---FESTWRVIQAVRKKLSAFWPTLA 372
YP + + I V + FW +L+
Sbjct: 361 GYPDKLYPNQKEAIDEVIEVQQEFWSSLS 389
>gi|74180336|dbj|BAE32336.1| unnamed protein product [Mus musculus]
Length = 513
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 199/375 (53%), Gaps = 31/375 (8%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A + L+ G+ +RC+ L+A EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEERCLCLSACEASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASK-LNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VH+ ++ L++ ++ D SK +++Y + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYIALVQK--TQTLDKEELHALSKQYDAVYFHPDTFHCARLAAGAALQLVDAVLTG 120
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+++ A+VRPPGHH++ A GFC++NNVA+AA + + + G+
Sbjct: 121 AVHNGLALVRPPGHHSQRAAANGFCVFNNVALAAK---HAKQKYGLQS------------ 165
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
VL+FS HR+E G+F+P + +G+G G G+ +N+PW G+AD
Sbjct: 166 -----------VLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQVGMGNAD 214
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G+I
Sbjct: 215 YLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRI 274
Query: 312 VLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
LEGGY+L S++ SV + LL D P +S IQ+V+ + +W +L
Sbjct: 275 CAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQSALESIQSVQTAQTPYWTSL 334
Query: 372 ADELPTKLTSLKAPP 386
+ L+S P
Sbjct: 335 QQNVAPVLSSSTHSP 349
>gi|341884856|gb|EGT40791.1| hypothetical protein CAEBREN_15499 [Caenorhabditis brenneri]
Length = 504
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 195/363 (53%), Gaps = 20/363 (5%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQ--RCVVLNAKEAKDKN 69
++RV L+ D++ +H+ P YH E R+ I +LQ G+ R L +EA ++
Sbjct: 3 EKRVFLIMDQQEERHDQPWSSYHIETSKRLDVIHERLQTTGLLNDPRIEHLPRREATEQE 62
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+ VHTE +VN +K + + ++++ SK I++N + + A LAA S I++ VA
Sbjct: 63 IRGVHTERYVNDVK-ATETMIEEQQEQFCSKYEDIFVNFATWKRAKLAAASAIDLVTSVA 121
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
+ A +RPPGHHA PDE GFC++NNVA+AA L R L K++IVD+DVH
Sbjct: 122 INK-TPGIAFIRPPGHHAMPDEGCGFCIFNNVAIAAKEAL--RSGLA-KKVMIVDYDVHA 177
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY--NINVPWENGRC 247
N TQ+ V S+HR+E GTF+P M G Y +N+P
Sbjct: 178 ANGTQECIESMENVKLISIHRYENGTFWP-------NMPQTGIYHNYKNTMNLPLNTIGL 230
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D+DY A++ HI+LP DF PD+IIIS+GFDA+ GDP G VTP G++ M+ +L+
Sbjct: 231 NDSDYFALFTHIILPSIYDFQPDLIIISSGFDASLGDPEGYMNVTPAGFATMV-RLLQNT 289
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLL-EDKPVAGSSEAYPF--ESTWRVIQAVRKKL 364
+ LEGGY L +++ + LL ED P PF ++ R++ +K
Sbjct: 290 GVPVAAILEGGYFLDALAADSEWVLRALLGEDVPPIQVEPLNPFIADTISRILARDEQKT 349
Query: 365 SAF 367
S F
Sbjct: 350 SFF 352
>gi|386001263|ref|YP_005919562.1| Histone deacetylase family protein [Methanosaeta harundinacea 6Ac]
gi|357209319|gb|AET63939.1| Histone deacetylase family protein [Methanosaeta harundinacea 6Ac]
Length = 340
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 196/360 (54%), Gaps = 31/360 (8%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R GL+Y +H T D HPE R+ + ++++G+ V + A + + +V
Sbjct: 3 RTGLIYHPIYLEHET---DGHPERKERLISALEMIRSSGLELELV--TPRPATLEEVRAV 57
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
H+ +++ ++ IS +R L+ ++ S EAA +AAG VI ERV +G
Sbjct: 58 HSPGYIDQVRTIS--------ERGGGYLDLDTVVSRRSYEAALMAAGGVITGIERVNDG- 108
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
L +AFA+VRPPGHHA P+ MGFC++NNVA+ A F +G+ ++LIVDWDVHHGN
Sbjct: 109 LENAFALVRPPGHHALPNRGMGFCIFNNVAIGARFA----QRMGMERVLIVDWDVHHGNG 164
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
T +F+ D V++FS H+ YP G +G G+ +NVP G GD+ Y
Sbjct: 165 TSAIFYDDRSVMYFSTHQF---PHYPGT--GRVKELGMDGAEGFTVNVPLPWG-TGDSGY 218
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ---- 308
A ++ IL P+A +F PDI+++SAG D DPL G +T + M + + A
Sbjct: 219 FAAFEEILKPLALEFDPDIVLVSAGQDPHQADPLSGMNLTCGAFGYMAAAVKEVADRCCG 278
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFW 368
G++V ALEGGYNL +++ S++A + + P E P + I+ V++ +S +W
Sbjct: 279 GRLVAALEGGYNLSALAESIVAVLRGFSGEDPGRIDGEEDPRAAER--IEEVKRAMSPYW 336
>gi|163783701|ref|ZP_02178688.1| acetoin utilization protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159881026|gb|EDP74543.1| acetoin utilization protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 309
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 181/327 (55%), Gaps = 25/327 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ G +YD+ KH+ PD HPE R+ +I N L+++G+ + + + + AK + +
Sbjct: 2 KTGFVYDDIYLKHDYPD---HPERKERLISIVNHLESSGLMKEILPVAPRRAKAEEVALN 58
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
H N+V + + L+ Y NE S + A A G V+E + + +G
Sbjct: 59 HDPNYVQEVHDFCKAG--------GGFLDPDTYANEHSYDVALTAVGGVLEGIDLILKGS 110
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ +AF VRPPGHHAE +AMGFCL+NNVAV A +L + G++K+ I+D+D HHGN
Sbjct: 111 IETAFCAVRPPGHHAEYAKAMGFCLFNNVAVGARYLRKK----GVDKVFIIDFDAHHGNG 166
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ+ F++D V +FS H + FYP G G G G GY +NVP + G GD DY
Sbjct: 167 TQRSFYQDDSVFYFSTHEY---PFYPGT--GSAQEKGAGKGEGYTLNVPMQAG-AGDEDY 220
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
V++ +L V +DF PD +++SAG+D + DPL V+ G +++K ++ + V
Sbjct: 221 RPVYEKLLPKVMEDFSPDFVLVSAGYDLHSDDPLTYLDVSTEGVRMIVKSILKTCRKLGV 280
Query: 313 ---LALEGGYNLGSISNSVLACMNVLL 336
ALEGGYNL ++ SV + +L
Sbjct: 281 PSLFALEGGYNLKALGESVGVTVEEML 307
>gi|211065499|ref|NP_001030172.1| histone deacetylase 10 [Rattus norvegicus]
gi|71152111|sp|Q569C4.1|HDA10_RAT RecName: Full=Histone deacetylase 10; Short=HD10
gi|62205055|gb|AAH92573.1| Histone deacetylase 10 [Rattus norvegicus]
Length = 588
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 179/305 (58%), Gaps = 8/305 (2%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A + L+ G+ +RC L+ EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEERCQCLSVCEASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASK-LNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VH+ ++ L++ ++ D SK +++Y + + A LAAG+ + + + V G
Sbjct: 63 VHSPEYIALVQK--TQTLDKEELHTLSKQYDAVYFHPDTFHCARLAAGAALRLVDAVLTG 120
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+++ A+VRPPGHH++ A GFC++NNVA+AA + + + G+ +ILIVDWDVHHG
Sbjct: 121 AVHNGVALVRPPGHHSQRAAANGFCVFNNVAIAAR---HAKQKYGLQRILIVDWDVHHGQ 177
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
Q +F DP VL+FS HR+E G F+P + +G G G G+ +N+PW G+AD
Sbjct: 178 GIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQVGMGNAD 237
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YLA + H+LLP+A +F P+++++SAGFD+A GDP G + TP ++ + + L A G+I
Sbjct: 238 YLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRI 297
Query: 312 VLALE 316
LE
Sbjct: 298 CAVLE 302
>gi|384917228|ref|ZP_10017357.1| Deacetylase family enzyme [Methylacidiphilum fumariolicum SolV]
gi|384525376|emb|CCG93230.1| Deacetylase family enzyme [Methylacidiphilum fumariolicum SolV]
Length = 314
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 177/326 (54%), Gaps = 22/326 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ ++ E+ H P G HP+ PNRI ++ KL+ A + + A +LSV
Sbjct: 4 KTAIITSEKFALHTPPSG--HPDAPNRISSVLPKLKDA-FGDSLLWIEPSPASLDWVLSV 60
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
HT +V +K + Y + S + A LA G+ +E ++V ++
Sbjct: 61 HTPEYVEKVKKTQIVPM------VLLDWGDTYAHGPSFDVALLAVGAALEAVDKVITKQI 114
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+AF +VRPPGHHA P+ AMGFC++N V +AA + + GI +ILI+DWDVHHGN T
Sbjct: 115 KNAFCLVRPPGHHALPNSAMGFCIFNTVGIAARYAIK---NYGIKRILILDWDVHHGNGT 171
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F++DP+V F S+H+ +YP G + IG+G G GY +N+ G D +Y+
Sbjct: 172 QDIFYEDPQVYFISLHQFP---YYPGT--GKASDIGKGAGEGYTMNICMHRGAT-DKEYV 225
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----G 309
+ +LP + P+II ISAGFDA DPLG +T GY M + L + AQ G
Sbjct: 226 EAFHTKVLPAIDKYKPEIIFISAGFDAHKDDPLGEICLTEQGYETMTQLLKNAAQKHCEG 285
Query: 310 KIVLALEGGYNLGSISNSVLACMNVL 335
KI+ LEGGYN S+ NS+ + + L
Sbjct: 286 KIISVLEGGYNTESLYNSIKSHLKAL 311
>gi|397780929|ref|YP_006545402.1| Histone deacetylase 18 [Methanoculleus bourgensis MS2]
gi|396939431|emb|CCJ36686.1| Histone deacetylase 18 [Methanoculleus bourgensis MS2]
Length = 330
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 165/298 (55%), Gaps = 24/298 (8%)
Query: 23 MCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLI 82
HN PD HPE+ R+KA AG+P + ++A +L VHT + I
Sbjct: 11 FAAHNDPD---HPESEARLKAAL-----AGVPGGARRIAPEQALPGDLALVHTHRQIAAI 62
Query: 83 KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRP 142
+++ R I YL GS +AA A G+ + E+ +GE +FA+VRP
Sbjct: 63 RSLCRACPPGRACYIDPD---TYLTWGSFDAALYATGAAWQAVEQALDGE--HSFALVRP 117
Query: 143 PGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPR 202
PGHHA PD AMGFCL+NNVAVA + L E ++++ IVDWD+HHGN TQ F+ R
Sbjct: 118 PGHHAMPDRAMGFCLFNNVAVATARALRE-----VDRVAIVDWDLHHGNGTQTAFYTSDR 172
Query: 203 VLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLP 262
VL+ SVH + G F G+ G GPG+GY IN P E+G G ADY V+ I LP
Sbjct: 173 VLYCSVH--QMGVF---PGTGWPEEQGSGPGVGYTINAPLESGSTG-ADYALVFRRIFLP 226
Query: 263 VAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYN 320
+ F PD++++SAG DAA DPLG + P + V+ L++ G + LALEGGY
Sbjct: 227 AIRRFEPDLVVVSAGQDAAFDDPLGSMLLRPDDFGVLTGMLLEARPGALALALEGGYG 284
>gi|398336031|ref|ZP_10520736.1| histone deacetylase [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 352
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 175/330 (53%), Gaps = 26/330 (7%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
K G ++ E HN H EN +RI A NKL K+
Sbjct: 19 KVATGFIFSEDFISHNANPKIPHFENSDRILACLNKLTQTSYFGSLYSPKLKDVDPTFYK 78
Query: 72 SVHTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+H+ NH+ I++ +K+ FDS E S AAY AA S I +A+ +
Sbjct: 79 EIHSRNHLQRIEDSKNKRGYFDSDTP----------FTENSWLAAYSAANSGITLADALI 128
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
G++ + F+++RPPGHHAE + MGFC+ NNVA+AA +L G KI I+DWDVHH
Sbjct: 129 SGKIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAIAARYLQKN----GFKKIFIIDWDVHH 184
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN TQ++F++DP V + S+H+ FYP G IG G G+G N+P + GD
Sbjct: 185 GNGTQEIFYRDPNVFYLSIHQF---PFYPMT--GHSEEIGYGDGVGTTKNIPMQTD-SGD 238
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS----VMLKKLMD 305
Y+ + I++P + P+II+ISAGFDA DPLGG +T G+ ++L+
Sbjct: 239 QSYIQKFKEIVIPTMEHVEPNIILISAGFDAHKEDPLGGMNITTNGFEQLSHIVLESADK 298
Query: 306 FAQGKIVLALEGGYNLGSISNSVLACMNVL 335
QG ++ LEGGYNL +++ SV A + VL
Sbjct: 299 ICQGNVLSFLEGGYNLKALAESVEAHIAVL 328
>gi|341892512|gb|EGT48447.1| hypothetical protein CAEBREN_17707 [Caenorhabditis brenneri]
Length = 504
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 195/363 (53%), Gaps = 20/363 (5%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQ--RCVVLNAKEAKDKN 69
++RV L+ D++ +H+ P YH E R+ I+ +LQ G+ R L +EA ++
Sbjct: 3 EKRVFLIMDQQEERHDQPWSSYHIETSKRLDVIYERLQTTGLLNDPRIEHLPRREATEQE 62
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+ VHTE +VN +K + + ++++ SK I++N + + A LAA S I++ VA
Sbjct: 63 IRGVHTERYVNDVK-ATETMIEEQQEQFCSKYEDIFVNFATWKRAKLAAASAIDLVTSVA 121
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
+ A +RPPGHHA PDE GFC++NNVA+AA L R L K++IVD+DVH
Sbjct: 122 INK-TPGIAFIRPPGHHAMPDEGCGFCIFNNVAIAAKEAL--RSGLA-KKVMIVDYDVHA 177
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY--NINVPWENGRC 247
N TQ+ V S+HR+E GTF+P M G Y +N+P
Sbjct: 178 ANGTQECIESMENVKLISIHRYENGTFWP-------NMPQTGIYHNYKNTMNLPLNTIGL 230
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
D+DY A++ HI+LP DF PD+IIIS+GFDA+ GDP G VTP G++ M+ +L+
Sbjct: 231 NDSDYFALFTHIILPSIYDFQPDLIIISSGFDASLGDPEGYMNVTPAGFATMV-RLLQNT 289
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLL-EDKPVAGSSEAYPF--ESTWRVIQAVRKKL 364
+ LEGGY L +++ + LL E P PF ++ R++ +K
Sbjct: 290 GVPVAAILEGGYFLDALAADSEWVLRALLGEQVPPIQVEPLNPFIADTISRILARDGQKT 349
Query: 365 SAF 367
S F
Sbjct: 350 SFF 352
>gi|433605247|ref|YP_007037616.1| hypothetical protein BN6_34450 [Saccharothrix espanaensis DSM
44229]
gi|407883100|emb|CCH30743.1| hypothetical protein BN6_34450 [Saccharothrix espanaensis DSM
44229]
Length = 548
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/325 (37%), Positives = 174/325 (53%), Gaps = 27/325 (8%)
Query: 33 YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDS 92
+H ENP + + L G+ R L + A D+ +L VHT H+ + +K D+
Sbjct: 218 HHLENPEAKRRVHELLVVTGLIDRLTRLTPRPATDEEILLVHTPGHLARL----TKANDT 273
Query: 93 RRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEA 152
S G + A LAAG I AE V EG++++A+A+VRPPGHHA PD
Sbjct: 274 G---GDGGDGSTPFGRGGLDIARLAAGGAIRAAEAVLEGKVDNAYALVRPPGHHAVPDSG 330
Query: 153 MGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHE 212
MGFC+ N+A+A L R + ++ +VD DVHHGN TQ +FW+DP VL S+H+
Sbjct: 331 MGFCMLANIAIA---LRAVRRTHNVARVAVVDIDVHHGNGTQTVFWEDPNVLALSLHQDR 387
Query: 213 FGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDII 272
F+P N GF T G G G GY +N+P G G YL ++LP + F PD+I
Sbjct: 388 ---FFPPN-SGFVTERGAGAGFGYTLNLPLPPG-TGTGGYLEATRRVVLPALRRFKPDLI 442
Query: 273 IISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGSISNSV 328
+++AGFDA A DPLG +TP Y M + ++D A G+++ EGGY + V
Sbjct: 443 VVAAGFDANALDPLGRMMLTPRAYREMARMVLDAAADLCDGRVLCVHEGGY----AAAYV 498
Query: 329 LACMNVLLEDKPVAGSSEAY--PFE 351
C N ++E +AG +E + PF
Sbjct: 499 PFCANAVIEV--LAGVTEPFREPFS 521
>gi|414883635|tpg|DAA59649.1| TPA: hypothetical protein ZEAMMB73_114812 [Zea mays]
Length = 480
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 165/279 (59%), Gaps = 22/279 (7%)
Query: 19 YDERMCKHNTPD--GDYHPENPNRIKAIWNKLQAAGI-PQRCVVLNAKEAKDKNLLSVHT 75
+DERM H+ + + HPE P+R++AI L AAGI P +C ++ +E + LL VH+
Sbjct: 208 FDERMLLHSELEVKPNPHPERPDRLRAIAASLAAAGIFPSKCALVPPREITKEELLMVHS 267
Query: 76 ENHVNLI---KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+H+ + KN+ F S Y N S+ AA LAAG ++A + G
Sbjct: 268 PDHIESVEQTKNMLYSYFTS----------DTYANGHSACAAKLAAGLCADLASLIVSGR 317
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + FA+VRPPGHHA +AMGFCL+NN AVAA K+LIVDWDVHHGN
Sbjct: 318 VRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAKRAG----AKKVLIVDWDVHHGNG 373
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F D VL+ S+HRHE G FYP G +G G G+++N+PW G GD DY
Sbjct: 374 TQEIFDGDKTVLYISLHRHEDGNFYPGT--GAAHEVGVLDGQGFSVNIPWSRGGVGDDDY 431
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRV 291
+ + ++LP+A +F DI IISAGFDAA GDPLG C V
Sbjct: 432 IFAFQTVVLPIASEFAADITIISAGFDAARGDPLGCCDV 470
>gi|91975756|ref|YP_568415.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
BisB5]
gi|91682212|gb|ABE38514.1| histone deacetylase superfamily [Rhodopseudomonas palustris BisB5]
Length = 370
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 177/304 (58%), Gaps = 21/304 (6%)
Query: 48 LQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLN 107
+ +G+ V + A+ A D ++L VHTE H+++IK IS++ IA L
Sbjct: 50 VSVSGLRDHLVDVVARPATDADILRVHTEEHLSIIKEISARPTGG----IAGD-GVTMLG 104
Query: 108 EGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASF 167
G + A L+AG IE+ ++V GEL + +A+V PPGHHA ++AMGFC++NN +VAA++
Sbjct: 105 NGGLDIALLSAGGAIELVKQVVAGELRNGYALVNPPGHHAPRNQAMGFCIFNNTSVAAAY 164
Query: 168 LLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTM 227
R LG++++ IVDWDVHHGN TQ ++W DP VL S+H+H +PAN GF T
Sbjct: 165 ---ARNVLGLDRVAIVDWDVHHGNGTQDIWWTDPSVLTISIHQH---LCFPAN-MGFVTE 217
Query: 228 IGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLG 287
GEG G GYN+N+P G G+A Y ++ +++P + + P +II+ +GFDA+ DPL
Sbjct: 218 RGEGDGHGYNLNIPLPPGS-GNAAYQHAFERVVIPALEAYRPQLIIVGSGFDASILDPLA 276
Query: 288 GCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSISNSVLACMNVLLE----DK 339
VT G+ + + ++D A GKI EGGY+ + LA + L E D
Sbjct: 277 RMMVTAAGFRKLARMVIDCADRICGGKIACVQEGGYSPHYLPFCGLAVIEELAEVRLLDD 336
Query: 340 PVAG 343
P G
Sbjct: 337 PYQG 340
>gi|456865517|gb|EMF83851.1| histone deacetylase family protein [Leptospira weilii serovar Topaz
str. LT2116]
Length = 316
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 177/333 (53%), Gaps = 29/333 (8%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ G +Y E HN H E+ +R+ A NKL K+ + +
Sbjct: 2 KTGFIYSEDFLYHNADSKIPHYESSDRLLACINKLHQTSYFNSLFFPEMKKVPSEFFHEI 61
Query: 74 HTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H+ H+ I+ K+ FDS E S AAY AA S I +A+ + G
Sbjct: 62 HSNTHLQKIERSKGKRGYFDSDTP----------FTEKSWIAAYSAANSGIILADALLSG 111
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L G KI I+DWDVHHGN
Sbjct: 112 TIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQKN----GFKKIFIIDWDVHHGN 167
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ++F++DP V + S+H+ FYP G + G+ G+G N+P + A
Sbjct: 168 GTQEIFYQDPNVFYLSIHQF---PFYPMT--GLSSETGKNEGIGTTKNIPMQANSDNQA- 221
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA---- 307
Y+ + +++P ++FGPDI++ISAGFDA DPLGG +T G+ + K +++ A
Sbjct: 222 YIQKFKEVVIPTMENFGPDIVLISAGFDAHKEDPLGGMNITTKGFEDLTKIVLESADKIC 281
Query: 308 QGKIVLALEGGYNLGSISNSV---LACMNVLLE 337
+GK++ LEGGYNL ++S SV +A N L+
Sbjct: 282 EGKVLSFLEGGYNLTALSESVEAHVAVFNFFLK 314
>gi|119505724|ref|ZP_01627793.1| histone deacetylase/AcuC/AphA family protein [marine gamma
proteobacterium HTCC2080]
gi|119458434|gb|EAW39540.1| histone deacetylase/AcuC/AphA family protein [marine gamma
proteobacterium HTCC2080]
Length = 370
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 176/341 (51%), Gaps = 35/341 (10%)
Query: 13 RRVGLLYDERMCKHNTPDGDY--------------HPENPNRIKAIWNKLQAAGIPQRCV 58
R+ GL+ E H+T G+Y H ENP + N L+ AG+
Sbjct: 5 RKTGLVAHELYMWHDT--GNYAGPMPYGNPVQPGTHAENPETKRRFRNLLEVAGMDDVLT 62
Query: 59 VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAA 118
+ + A + +L HT H+ ++ IS+ D GS E A L+A
Sbjct: 63 AIKPRSATEAEILRFHTPEHLTNVQRISA-------DTGGDAGFFTPAGRGSYEIAMLSA 115
Query: 119 GSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN 178
G V+ E + E+++A+A+VRPPGHHA E MGFC++ N +A L LG+N
Sbjct: 116 GGVLSALEALMADEIDNAYALVRPPGHHAIAGEGMGFCIFGNATIAGFHALE---TLGVN 172
Query: 179 KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNI 238
+I VDWDVHHGN TQ F+ D R L SVH+ F P D G +GEG G GYNI
Sbjct: 173 RIAYVDWDVHHGNGTQSAFYDDARALTISVHQDN--CFPP--DSGHVHEVGEGAGEGYNI 228
Query: 239 NVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSV 298
N+P G G Y AV+D +++P +GP++II+ +GFDA A DPLG ++ GY
Sbjct: 229 NIPLPPG-SGVGAYEAVFDQLVIPALDAYGPELIIVPSGFDAGAYDPLGRMQMHSEGYRS 287
Query: 299 MLKKLMDFA----QGKIVLALEGGYNLGSISNSVLACMNVL 335
+ +KL+ A QGKI++ EGGYN ++ LA M L
Sbjct: 288 LTEKLLSAADRHCQGKILMTHEGGYNSWTVPFFGLAVMEAL 328
>gi|224369970|ref|YP_002604134.1| protein AcuC [Desulfobacterium autotrophicum HRM2]
gi|223692687|gb|ACN15970.1| AcuC [Desulfobacterium autotrophicum HRM2]
Length = 316
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 189/332 (56%), Gaps = 25/332 (7%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
++ G ++D R H+T G YHPE R+ AI L+ A + ++ ++ A A K +L+
Sbjct: 2 KKTGYVHDLRYLLHDT--GPYHPEMSERLIAIHEGLRKANLLEQLTIIPASRADLKWILA 59
Query: 73 VHTENHVNLIKNIS---SKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
VH ++V + +S + FD + ++I + + E A+LA G +++ + +
Sbjct: 60 VHDHDYVRRFEEVSLSGNHYFDDQDNQICVE---------TYETAFLAVGGILDAVQMMM 110
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
+ ++++AF +RPPGHHAE D+AMGFC +NN+A+AA +L + E GI ++ IVD+DVHH
Sbjct: 111 DQKIDNAFCAIRPPGHHAEVDKAMGFCYFNNIAIAARYL---QSECGIERVGIVDFDVHH 167
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN T+ +F DP V ++S+H H YP F G G G+ N P GR GD
Sbjct: 168 GNGTEHIFQSDPSVFYYSIHEHP-SFAYPGTGRAFDE--GTLKGFGFTKNSPVLPGR-GD 223
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF--- 306
+Y ++ LLP + F P+II++S GFDA GD + +T G+S +++ +M
Sbjct: 224 DNYKSLITRDLLPAFERFKPEIILVSTGFDAHVGDEMSDMNLTTEGFSWIMETIMALANH 283
Query: 307 -AQGKIVLALEGGYNLGSISNSVLACMNVLLE 337
AQG++V LEGGY+L + +++LL+
Sbjct: 284 HAQGRVVSILEGGYSLKLLPELAANHVSILLK 315
>gi|327400501|ref|YP_004341340.1| histone deacetylase superfamily protein [Archaeoglobus veneficus
SNP6]
gi|327316009|gb|AEA46625.1| histone deacetylase superfamily [Archaeoglobus veneficus SNP6]
Length = 359
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 197/374 (52%), Gaps = 41/374 (10%)
Query: 15 VGLLYDERMCKH-NTPDGDYHPENPNRIKAIWNKLQAAGI--PQRCVVLNAKEAKDKNLL 71
G+++ + +H TP HPE R+ ++L GI + V+L +A + ++L
Sbjct: 3 TGIVFHPKYLEHEQTPT---HPERKERLAYTLDQLMEEGIFENREIVLLEPFKASESDVL 59
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
+VHT + +K +SR+ + SI + G + A LAAG I A+ VAEG
Sbjct: 60 AVHTPEYFEFLKR------ESRKGGVIDWDTSIPV--GLIDVALLAAGGAIRAAKAVAEG 111
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
E+++AFA+VRPPGHHA P GFC NN+A+A +L G KILI+DWD HHG+
Sbjct: 112 EVDNAFAMVRPPGHHARPYTGAGFCYLNNIAIATKWLQRN----GFKKILILDWDAHHGD 167
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ++F++D VLF S+H+ YP G+ G+G G GY INVP G GD
Sbjct: 168 GTQEIFYEDSSVLFISLHQM---PLYPGT--GYPHEYGKGEGEGYTINVPLPPG-AGDEC 221
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ--- 308
YL V+D I+ PVA DF PD I +SAG D DPL +T GY+ ++ + A+
Sbjct: 222 YLTVFDEIIEPVAIDFEPDFIAVSAGQDNHFTDPLTSLALTARGYAELMVRARRLAEKLC 281
Query: 309 -GKIVLALEGGYNL-GSISNSVLACMNVLLE-DKPVAGSSEAYPFESTWR---------- 355
G++ LEGGY++ ++ + LA + + E D E+Y E WR
Sbjct: 282 DGRLFAVLEGGYSVEKALPYTNLAIIAAMAEMDISCIREPESYADELKWRKKESAIETVR 341
Query: 356 -VIQAVRKKLSAFW 368
IQ V++ S +W
Sbjct: 342 ATIQEVKRIHSTYW 355
>gi|294900057|ref|XP_002776878.1| histone deacetylase hda1, putative [Perkinsus marinus ATCC 50983]
gi|239884079|gb|EER08694.1| histone deacetylase hda1, putative [Perkinsus marinus ATCC 50983]
Length = 1000
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 148/239 (61%), Gaps = 12/239 (5%)
Query: 105 YLNEGSSEAAYLAAGSVIEVAERVAEGE--LNSAFAIVRPPGHHAEPDEAMGFCLYNNVA 162
Y+ + S AA +AG V+ + E + + + ++ FA VRPPGHHA EAMGFC +NNVA
Sbjct: 23 YVCKESPAAAKASAGCVLALVEEIVDKDSPVDRGFACVRPPGHHATCSEAMGFCFFNNVA 82
Query: 163 VAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDD 222
+AA L R G+ ++ IVDWDVHHGN T +F +D VL SVHR + GTFYP +
Sbjct: 83 IAAKAL---RERYGVERVAIVDWDVHHGNGTCGIFEEDSGVLVISVHRFDGGTFYPGS-- 137
Query: 223 GFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAA 282
G +T +G G +GY +NVP +G GD + +D ++LP F P+ I++S GFDA
Sbjct: 138 GNWTEMGSGDAVGYTLNVPI-DGTYGDEELHFCFDKLVLPALTSFKPEFILVSCGFDACI 196
Query: 283 GDPLGGCRVTPYGYSVMLKKLMD-FAQG---KIVLALEGGYNLGSISNSVLACMNVLLE 337
DPLG C VTP Y + ++L++ F +G ++ L LEGGYNL SI+ S CM LLE
Sbjct: 197 NDPLGECEVTPACYGRLTRQLIESFPEGSAPRVALVLEGGYNLDSIAASAEECMRALLE 255
>gi|359728013|ref|ZP_09266709.1| histone deacetylase [Leptospira weilii str. 2006001855]
Length = 315
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 175/331 (52%), Gaps = 26/331 (7%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+K + G +Y E HN H E+ +R+ NKL+ K+ +
Sbjct: 1 MKMKTGFIYSEDFLYHNADPKIPHYESSDRLLVCINKLRQTSYFNSLFFPEMKKVPSEFF 60
Query: 71 LSVHTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
+H+ H+ I+ K+ FDS E S AAY AA S I +A+ +
Sbjct: 61 HEIHSSTHLQKIERSKGKRGYFDSDTP----------FTEKSWIAAYSAANSGITLADAL 110
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
G + + F+++RPPGHHAE + MGFC+ NNVA+ A +L G KI I+DWDVH
Sbjct: 111 LSGTIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQKN----GFKKIFIIDWDVH 166
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ++F++DP V + S+H+ FYP G + G+ G+G N+P +
Sbjct: 167 HGNGTQEIFYQDPNVFYLSIHQFP---FYPMT--GLSSETGKNEGIGTTKNIPMQANSDS 221
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
A Y+ + +++P + FGPD+++ISAGFDA DPLGG +T G+ + K +++ A
Sbjct: 222 QA-YIQKFKEVVIPTMEHFGPDVVLISAGFDAHKEDPLGGMNITTKGFEDLTKIVLESAD 280
Query: 309 ----GKIVLALEGGYNLGSISNSVLACMNVL 335
GK++ LEGGYNL ++S SV A + V
Sbjct: 281 KICGGKVLSFLEGGYNLTALSESVEAHVAVF 311
>gi|347755697|ref|YP_004863261.1| deacetylase [Candidatus Chloracidobacterium thermophilum B]
gi|347588215|gb|AEP12745.1| Deacetylase, including histone deacetylase and acetoin utilization
protein [Candidatus Chloracidobacterium thermophilum B]
Length = 329
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 173/321 (53%), Gaps = 20/321 (6%)
Query: 31 GDYHPENPNRIKAIWNKL-QAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQ 89
G +HPE R I L Q + C + A L VHT +H+ + +S+
Sbjct: 18 GSHHPETAARTTRIIRALEQDVHVQTACQWGMPRPATTDELARVHTPDHLARVAE-ASRA 76
Query: 90 FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEP 149
+R+ +A +++ ++ GS EAA AAG+V+ E + +G+ AF RPPGHHA P
Sbjct: 77 AQARQQLVALDPDTV-VSAGSYEAAGDAAGAVLAAVEAIHQGKARRAFVAARPPGHHATP 135
Query: 150 DEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVH 209
+ AMGFCL+NNVAV A LG ++LIVDWDVHHGN TQ +F+ DP V FFS+H
Sbjct: 136 NRAMGFCLFNNVAVGA----RHAQHLGFQRVLIVDWDVHHGNGTQDIFYADPSVFFFSIH 191
Query: 210 RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGP 269
+ YP G G GPG G+ +NVP G A YL ++ L + F P
Sbjct: 192 QFP---HYPGT--GSQWERGVGPGEGFTLNVPLRAGTPA-AAYLEAFEAGLETITSHFHP 245
Query: 270 DIIIISAGFDAAAGDPLGGCRVTPYGYSVM---LKKLMD-FAQGKIVLALEGGYNLGSIS 325
D + ISAGFDA DPLG +T + M + K+ D F+ G++V LEGGYNL ++
Sbjct: 246 DFVFISAGFDAHVADPLGNLNLTDRDFVQMTHLVNKVADRFSAGRLVSVLEGGYNLDTLP 305
Query: 326 NSV---LACMNVLLEDKPVAG 343
+V +A + + E+ P AG
Sbjct: 306 QTVCHHVAALAGVAEEAPAAG 326
>gi|269928981|ref|YP_003321302.1| Histone deacetylase [Sphaerobacter thermophilus DSM 20745]
gi|269788338|gb|ACZ40480.1| Histone deacetylase [Sphaerobacter thermophilus DSM 20745]
Length = 375
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 180/345 (52%), Gaps = 33/345 (9%)
Query: 13 RRVGLLYDERMCKHNT--------------PDGDYHPENPNRIKAIWNKLQAAGIPQRCV 58
R GL++ ER +HNT + HP NP + + L AG+ +R V
Sbjct: 4 RSTGLVFCERYLQHNTNPYRLWRSGNPLPFVEQVDHPSNPRLAQRTKHLLDLAGLSRRMV 63
Query: 59 VLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAA 118
+ A ++++ + HT +V ++ I + + + +S E A LAA
Sbjct: 64 RIEPYPATEEDVTAYHTPAYVQRVREICAAGGGDTGEGAPAAPDSY-------EIALLAA 116
Query: 119 GSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGIN 178
G V+ + V G++ A+VRPPGHHA D MGFC++ NVA+AA + R G+
Sbjct: 117 GGVMAAVDAVMTGQVRQCLALVRPPGHHAMADRGMGFCIFGNVAIAAH---HARRRHGVE 173
Query: 179 KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNI 238
+ILIVDWDVHHGN TQ F+ DP VLF S+H+ G + P G G GPG GY +
Sbjct: 174 RILIVDWDVHHGNGTQDAFYADPGVLFVSIHQD--GLYPPGW--GAVEDTGTGPGAGYTV 229
Query: 239 NVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSV 298
N+P G GDA YLA + ++ P+A F P+++I+SAG DA+A DPLG ++ Y
Sbjct: 230 NIPLPPG-SGDAAYLAAFTRVIAPIAARFRPELVIVSAGQDASASDPLGRMCLSTEAYRR 288
Query: 299 MLKKLMDF----AQGKIVLALEGGYNLGSISNSVLACMNVLLEDK 339
M + D A G++V+ALEGGY+ LA LL ++
Sbjct: 289 MTAVMRDIAASSADGRLVVALEGGYSEIYAPYCTLAIAEELLGER 333
>gi|115372586|ref|ZP_01459893.1| histone deacetylase/AcuC/AphA family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115370307|gb|EAU69235.1| histone deacetylase/AcuC/AphA family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 587
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 188/349 (53%), Gaps = 33/349 (9%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
G HPE+P R+++I + L + V + + A L +VHT + ++ +
Sbjct: 264 GQGHPESPARLQSILSVLARTPV-AGTQVRSPRSATAAELSAVHTPELRQALLGMAGHRA 322
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD 150
D L+ S +AA LAAG+ + E V G +AFA+VRPPGHHAEP
Sbjct: 323 VIDED--------TRLSPDSYDAALLAAGAAVGAVEEVMAGRARNAFALVRPPGHHAEPG 374
Query: 151 EAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHR 210
AMGFCL+NNVA+AA LG ++L++DWDVHHGN TQ F VL+ SVH+
Sbjct: 375 RAMGFCLFNNVAIAAEAGRR----LGAERVLVLDWDVHHGNGTQAAFEGRRDVLYQSVHQ 430
Query: 211 HEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPD 270
+ +YP G +G+G G G+++N G D+DY ++++ +LLP+A F P
Sbjct: 431 Y---PYYPGT--GAPREVGQGAGEGFSVNCALPGGAT-DSDYRSIFEDLLLPIADSFQPQ 484
Query: 271 IIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSISN 326
++++SAGFD DPLGG VT G++ M L A+ GK+VL LEGGY+L +S
Sbjct: 485 LMLVSAGFDPHRNDPLGGMLVTERGFAAMCAGLRSLAERLCGGKLVLVLEGGYSLEGLSQ 544
Query: 327 SVLACMNVLLEDKPVAGSSEAYP----FESTWRVIQAVRKKLSAFWPTL 371
SV AC+ VL AG S+++P T I R+ L +W L
Sbjct: 545 SVHACIEVL------AGRSDSFPGGETSSDTAHAIAQSREALRPYWSCL 587
>gi|407694185|ref|YP_006818973.1| histone deacetylase superfamily [Alcanivorax dieselolei B5]
gi|407251523|gb|AFT68630.1| Histone deacetylase superfamily [Alcanivorax dieselolei B5]
Length = 369
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 170/292 (58%), Gaps = 17/292 (5%)
Query: 33 YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDS 92
+H +P+ + + +G + A+D+++L VHT H+ ++ +S+ +
Sbjct: 35 HHLAHPDTKRRFHELISTSGQLDHMTPIKPLPARDEDILRVHTGEHLENVRRVSALEHGG 94
Query: 93 RRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEA 152
+ YL G E A LAAG I++ + + +G+++S +A+V PPGHHA D A
Sbjct: 95 D-----AGDGVTYLGNGGLEIAMLAAGGAIQMVKSLVQGDIDSGYALVNPPGHHAPRDGA 149
Query: 153 MGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHE 212
MGFC++NN +VAA++ R +LG++++ IVDWDVHHGN TQ ++W+DP VL S+H+H
Sbjct: 150 MGFCIFNNTSVAAAY---ARDKLGLDRVAIVDWDVHHGNGTQDIWWEDPSVLTISLHQHL 206
Query: 213 FGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDII 272
F P + G+ G G G GYN+NVP G CG+ YL + ++LP + F P +I
Sbjct: 207 --CFPP--ESGYVGERGAGKGHGYNLNVPMPPG-CGNGAYLYAMETVVLPALQAFRPQLI 261
Query: 273 IISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYN 320
I+ GFDA+ DPL VT G+ M ++++D A +G+I+ EGGY+
Sbjct: 262 IVGCGFDASIMDPLARMMVTSEGFRAMARRIIDSADELCEGRILFVQEGGYS 313
>gi|328953923|ref|YP_004371257.1| histone deacetylase superfamily protein [Desulfobacca acetoxidans
DSM 11109]
gi|328454247|gb|AEB10076.1| histone deacetylase superfamily [Desulfobacca acetoxidans DSM
11109]
Length = 316
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 177/332 (53%), Gaps = 33/332 (9%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +YD+R HN G HPE P+R++AI ++ +G+ ++ ++ EA + +H
Sbjct: 4 TGYVYDKRYLLHNP--GPKHPERPDRLRAIHRRVVFSGLIKQIRLIEPYEASLAWIERLH 61
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEG-------SSEAAYLAAGSVIEVAER 127
++ R R A + +L+E S A LA G V +
Sbjct: 62 DHRYIE-------------RFRTACQQGQPFLDETENGICRESFNIARLAVGGVFAACDA 108
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ G +N+AF VRP GHHAE +A GFC +NNVA+ A +L + + G+ +I IVDWD
Sbjct: 109 MMHGAVNNAFCAVRPAGHHAERAQARGFCFFNNVALGAKYL---QEKYGLARIAIVDWDA 165
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQ + +DP VLF S+H GT YP G+ + G+G G GY +N P+
Sbjct: 166 HHGNGTQHLLEEDPTVLFISLHESP-GTCYPGT--GWESERGKGEGFGYTLNFPFP-AYS 221
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM--- 304
D DYL V D +LP ++F PD ++ISAGFD A DP+ R++ Y +M L+
Sbjct: 222 RDPDYLEVMDEEVLPALEEFRPDCLMISAGFDGHARDPMSRLRLSDKAYMIMGALLLTFA 281
Query: 305 -DFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
DF QG+I+ LEGGYNL + + V + VL
Sbjct: 282 RDFCQGRIISVLEGGYNLEVLEDCVFDHIRVL 313
>gi|430742652|ref|YP_007201781.1| deacetylase [Singulisphaera acidiphila DSM 18658]
gi|430014372|gb|AGA26086.1| deacetylase, histone deacetylase/acetoin utilization protein
[Singulisphaera acidiphila DSM 18658]
Length = 332
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 177/322 (54%), Gaps = 22/322 (6%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+ R V L D RM H P G HPE P R+KAI L+ G+ C +EA + L
Sbjct: 14 VPRMVTLFTDPRMLDHIPPAG--HPERPERLKAILRHLERTGLLASCPKGMIREATHEEL 71
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
L VHT ++ + + + S + +L+ GS AA LAAG+ +E V E
Sbjct: 72 LRVHTPGYLQHLADFEAGGGGSIEE-------DTWLSSGSGLAARLAAGAAVEAVSAVVE 124
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G A +VRPPGHHA P E MGFCLY N+AVAA+ ++ LG+N++LIVD+DVHHG
Sbjct: 125 GPSKRALCLVRPPGHHARPGEPMGFCLYGNIAVAAADAIH---RLGMNRVLIVDFDVHHG 181
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ++F+ DP V F S+HR FYP T G G GL NI +P R A
Sbjct: 182 NGTQEIFYDDPAVAFLSIHRF---PFYPGTGAADETGTGRGLGLTRNIPLPAHVSR---A 235
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF---- 306
DY A + L +A P++++ISAGFDA DP+GG + + V+ + L++
Sbjct: 236 DYHAAFRAELESLADRIRPELVLISAGFDAHEEDPVGGLGLLEEDFEVLTRDLINVAETH 295
Query: 307 AQGKIVLALEGGYNLGSISNSV 328
A+G+IV LEGGYN+ ++ V
Sbjct: 296 AEGRIVSVLEGGYNISRLAGCV 317
>gi|310823792|ref|YP_003956150.1| histone deacetylase family protein [Stigmatella aurantiaca DW4/3-1]
gi|309396864|gb|ADO74323.1| Histone deacetylase family protein [Stigmatella aurantiaca DW4/3-1]
Length = 342
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 188/349 (53%), Gaps = 33/349 (9%)
Query: 31 GDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
G HPE+P R+++I + L + V + + A L +VHT + ++ +
Sbjct: 19 GQGHPESPARLQSILSVLARTPVAG-TQVRSPRSATAAELSAVHTPELRQALLGMAGHRA 77
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD 150
D L+ S +AA LAAG+ + E V G +AFA+VRPPGHHAEP
Sbjct: 78 VIDED--------TRLSPDSYDAALLAAGAAVGAVEEVMAGRARNAFALVRPPGHHAEPG 129
Query: 151 EAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHR 210
AMGFCL+NNVA+AA LG ++L++DWDVHHGN TQ F VL+ SVH+
Sbjct: 130 RAMGFCLFNNVAIAA----EAGRRLGAERVLVLDWDVHHGNGTQAAFEGRRDVLYQSVHQ 185
Query: 211 HEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPD 270
+ +YP G +G+G G G+++N G D+DY ++++ +LLP+A F P
Sbjct: 186 Y---PYYPGT--GAPREVGQGAGEGFSVNCALPGGAT-DSDYRSIFEDLLLPIADSFQPQ 239
Query: 271 IIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSISN 326
++++SAGFD DPLGG VT G++ M L A+ GK+VL LEGGY+L +S
Sbjct: 240 LMLVSAGFDPHRNDPLGGMLVTERGFAAMCAGLRSLAERLCGGKLVLVLEGGYSLEGLSQ 299
Query: 327 SVLACMNVLLEDKPVAGSSEAYP----FESTWRVIQAVRKKLSAFWPTL 371
SV AC+ VL AG S+++P T I R+ L +W L
Sbjct: 300 SVHACIEVL------AGRSDSFPGGETSSDTAHAIAQSREALRPYWSCL 342
>gi|156742869|ref|YP_001432998.1| histone deacetylase superfamily protein [Roseiflexus castenholzii
DSM 13941]
gi|156234197|gb|ABU58980.1| histone deacetylase superfamily [Roseiflexus castenholzii DSM
13941]
Length = 345
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 189/326 (57%), Gaps = 23/326 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
R + + R H+ P H E R+ AI L A+G+ + + A+ A + LL+V
Sbjct: 2 RTAIAINPRHAAHDEP---RHVEQAARLHAITAALNASGLRASLLEIPARPATEDQLLAV 58
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+ + + L++ S+ + S D + Y S +AA +AAG+ + V E V G
Sbjct: 59 HSPSMIELVR-WSANRPHSWID------HDTYTTSASWDAALMAAGTAVAVVEAVVGGSA 111
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+ FA+VRPPGHHA P E+MGFCL+NNVAVAA + ++ L I ++ IVD+DVHHGN T
Sbjct: 112 RNGFALVRPPGHHATPTESMGFCLFNNVAVAARYAID---HLSIGRVAIVDFDVHHGNGT 168
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q +F+ D RV F S H YP G IG G G G +N+P +G GDA +
Sbjct: 169 QDIFYTDDRVFFCSTHA---SPLYPGT--GAERDIGSGKGHGTTLNLPLPHG-VGDAGFA 222
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----G 309
++D +++P + + PD+I++SAG+D DPLG ++ GY+ + ++LM+ A+ G
Sbjct: 223 RLFDDVVIPAIRRYRPDLILVSAGYDGHWADPLGPLTLSVAGYAALTRRLMEAAEEVCRG 282
Query: 310 KIVLALEGGYNLGSISNSVLACMNVL 335
++VL LEGGY+L +++ S +AC+ VL
Sbjct: 283 RMVLVLEGGYHLRALAASAMACLEVL 308
>gi|330467195|ref|YP_004404938.1| histone deacetylase superfamily protein [Verrucosispora maris
AB-18-032]
gi|328810166|gb|AEB44338.1| histone deacetylase superfamily protein [Verrucosispora maris
AB-18-032]
Length = 377
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 164/306 (53%), Gaps = 17/306 (5%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
H ENP + + +G+ V+ + A LL VHT +HV IK Q D R
Sbjct: 36 HIENPEAKRRAHELIHVSGLLAELTVIEPRRATMAELLRVHTGDHVQHIKT----QSDLR 91
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
A S + GS A LAAG +IE+ VA GE+ + +A+ RPPGHHA D M
Sbjct: 92 GGGDAGDGFSP-VGPGSYAIARLAAGGLIELVTAVARGEVTNGYALTRPPGHHATADRGM 150
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL+NN+AVAA + + ELG+ +I IVDWDVHHGN TQ +F+ DP VL S+ H+
Sbjct: 151 GFCLFNNIAVAAR---HAQAELGLTRIAIVDWDVHHGNGTQSIFYTDPSVLTISL--HQA 205
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
G F P D G+ G G G GY INVP G G A YL I+LP + F PD+I+
Sbjct: 206 GCFPP--DSGWIRENGAGDGTGYAINVPLPPG-TGHAGYLHAMTEIVLPALERFAPDLIL 262
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGSISNSVL 329
++ GFDA DP+ +T Y M + L D A G++V A EGGY+ + L
Sbjct: 263 LANGFDANVFDPMARQMLTAASYRAMTRMLTDAADRLCHGRLVAAHEGGYSPFYVPYCAL 322
Query: 330 ACMNVL 335
A + L
Sbjct: 323 AFLEEL 328
>gi|330507266|ref|YP_004383694.1| histone deacetylase family protein [Methanosaeta concilii GP6]
gi|328928074|gb|AEB67876.1| histone deacetylase family protein [Methanosaeta concilii GP6]
Length = 339
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 194/361 (53%), Gaps = 35/361 (9%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ L+Y H+T D HPE R+ AI +++++ G+ C+ K A + + S+
Sbjct: 5 KFALVYHPIYLLHDT---DGHPERKERLTAILDRIESEGLDIECI--TPKPATIEQVESI 59
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
H +++ +K I +R L+ L++ S +AA +AAG I + V EG
Sbjct: 60 HGRRYIDQVKAIC--------ERGGGHLDIDTILSKDSFDAALMAAGGAIAAVDAVIEGH 111
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
AFA+VRPPGHHA P+ MGFC++NNVA+AA + E K+LIVDWDVHHGN
Sbjct: 112 -RGAFALVRPPGHHAMPNRGMGFCVFNNVAIAARHAQSRDLE----KVLIVDWDVHHGNG 166
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
T +F+ D VL+FS H+ YP G +GE G N+NVP +G GD Y
Sbjct: 167 TNAIFYSDRSVLYFSTHQF---PHYPGT--GRMNDVGEDGAEGTNVNVPLPSG-TGDEGY 220
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM---LKKLMDF-AQ 308
L + IL P+A +F PDI+++SAG D DPLGG +T G++ + +K++ D +
Sbjct: 221 LMAYREILKPIAIEFSPDIVLVSAGQDPHKDDPLGGMGLTASGFAAIAGVVKEVADICSN 280
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFE-STWRVIQAVRKKLSAF 367
G++ LEGGYNL + + +++A + D P + + F+ R I ++ A+
Sbjct: 281 GRVAAVLEGGYNLFAQAEAIVAQIRAFQGDVP-----DIHGFDPKVARRIDEIKNIQKAY 335
Query: 368 W 368
W
Sbjct: 336 W 336
>gi|294497858|ref|YP_003561558.1| histone deacetylase family protein [Bacillus megaterium QM B1551]
gi|294347795|gb|ADE68124.1| histone deacetylase family protein [Bacillus megaterium QM B1551]
Length = 373
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 186/335 (55%), Gaps = 35/335 (10%)
Query: 18 LYDERMCKHNTPDGDY------------HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
++D+R +HNT Y EN +R+ I ++ +G+ V + EA
Sbjct: 8 IWDDRFLRHNTGKIQYVFEGGETVEPCDEFENKHRMNVIKEMIEKSGLVHHLVRQSPYEA 67
Query: 66 KDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVA 125
D++LL VHT+NH+ ++ K ++ + + + EG A L+AG+V++
Sbjct: 68 SDEDLLRVHTKNHIGHVQ----KACEAETREVGPEAYASAETEG---IARLSAGAVMKAV 120
Query: 126 ERVAEGE-LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVD 184
+ V E E ++ +A +RPPGHHA D+AMGFC YNNVAV A++ + G+ ++ I+D
Sbjct: 121 DTVMESETISKVYAQIRPPGHHASSDQAMGFCFYNNVAVGAAYAIE---HYGLKRVAILD 177
Query: 185 WDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWEN 244
WDVHHGN TQ +F++ VL S+H + ++P Y IG+G G GYN+N+P +
Sbjct: 178 WDVHHGNGTQDIFYERDDVLVISIHEED---YFPLESGQVYE-IGQGKGEGYNVNIPVPS 233
Query: 245 GRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM 304
GD Y V++ I+ PV F P++IIISAG DA A DP+ VT G+ M K+
Sbjct: 234 -LTGDEGYQYVFESIIAPVISQFEPELIIISAGQDANALDPISRLMVTREGFKYMANKVR 292
Query: 305 DFA----QGKIVLALEGGYNLGSISNSVLACMNVL 335
+ A +G++++A EGGYNL + +A M V+
Sbjct: 293 ELAETYCEGRLIVAQEGGYNLAYLP---IATMGVI 324
>gi|308493223|ref|XP_003108801.1| CRE-HDA-6 protein [Caenorhabditis remanei]
gi|308247358|gb|EFO91310.1| CRE-HDA-6 protein [Caenorhabditis remanei]
Length = 514
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 177/317 (55%), Gaps = 18/317 (5%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI--PQRCVVLNAKEAKDKNLL 71
RV L+ DE+ KH+ P YH E R++ I +LQ G+ R L+ +EA ++ +
Sbjct: 6 RVFLIMDEQEEKHDQPWSSYHIETSKRLEVIQERLQTTGLYADLRIEKLSRREASEEEIR 65
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
VHTE +V +K + ++++ +K I++N + + A LAAGS I++ V
Sbjct: 66 GVHTERYVKDVKKTETMT-KQQQEQFCTKYEDIFVNSATWKRAKLAAGSAIDLVTAVTSH 124
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
++ A +RPPGHHA PDE GFC++NNVA+AA L +++IVD+DVH N
Sbjct: 125 KM-PGIAFIRPPGHHAMPDEGCGFCIFNNVAIAAKETLRNGTA---KRVMIVDYDVHAAN 180
Query: 192 STQKMFWK-DPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN--INVPWENGRCG 248
TQ+ V S+HR+E GTF+P M G YN +N+P
Sbjct: 181 GTQECIESMGENVRLISIHRYENGTFWP-------NMPQTGIYHNYNNTMNLPLNTTALN 233
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
D+DYLA++ +I+LP + PD+II+S+GFDA+ GDP G VTP G++ M++ LM+
Sbjct: 234 DSDYLALFTYIILPSINSYKPDVIIVSSGFDASLGDPEGYMNVTPAGFATMIRLLMNTGI 293
Query: 309 GKIVLALEGGYNLGSIS 325
+ LEGGY L +++
Sbjct: 294 -PVAAILEGGYFLDALA 309
>gi|421098612|ref|ZP_15559277.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200901122]
gi|410798365|gb|EKS00460.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200901122]
Length = 313
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 175/328 (53%), Gaps = 26/328 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ G +Y + HN H E+ +R+ A NKL K+ + +
Sbjct: 2 KTGFIYSKDFLYHNADPKIPHYESSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEFFNEI 61
Query: 74 HTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H+ H+ I+ K+ FDS E S AAY AA S I +A+ + G
Sbjct: 62 HSSAHLQKIERSKGKRGYFDSDTP----------FTEKSWIAAYSAANSGITLADALLSG 111
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L G+ KI I+DWDVHHGN
Sbjct: 112 TIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQKN----GLKKIFIIDWDVHHGN 167
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ++F++DP V + S+H+ FYP G + G+ G+G N+P + A
Sbjct: 168 GTQEIFYQDPNVFYLSIHQFP---FYPMT--GLSSETGKNEGIGTTKNIPMQANSDNQA- 221
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA---- 307
Y+ + +++P + FGPD+++ISAGFDA DPLGG +T G+ + K +++ A
Sbjct: 222 YIQKFKEVVIPTMEHFGPDVVLISAGFDAHKEDPLGGMNITTKGFEDLTKIVLESANKIC 281
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVL 335
+GK++ LEGGYNL ++S SV A + V
Sbjct: 282 EGKVLSFLEGGYNLTALSESVEAHVAVF 309
>gi|384250731|gb|EIE24210.1| histone deacetylase, partial [Coccomyxa subellipsoidea C-169]
Length = 210
Score = 200 bits (509), Expect = 2e-48, Method: Composition-based stats.
Identities = 99/210 (47%), Positives = 135/210 (64%), Gaps = 8/210 (3%)
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G + + AIVRPPGHHAE AMGFC +NN +AA G ++L++DWDVHHG
Sbjct: 3 GAVQNGAAIVRPPGHHAESGMAMGFCYFNNAGLAAR----AAQAAGARRVLVLDWDVHHG 58
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ +F DP V++ S+HR++ G FYP G +G G G G+ +NVPW G G+
Sbjct: 59 NGTQHIFEHDPGVMYMSIHRYDGGHFYPGT--GAVKEVGRGAGEGFTVNVPWPMGGMGNG 116
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK 310
DY+A + H+++P+A ++ PD+II+SAGFDA+AGDP+GGCRVTP Y+ M L A
Sbjct: 117 DYMAAFSHVIIPIAHEYSPDLIIVSAGFDASAGDPIGGCRVTPEAYAHMTAMLG--AVAP 174
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLEDKP 340
+ + LEGGYNL + + A + VLL KP
Sbjct: 175 LAVLLEGGYNLTATAAGCEAVLRVLLGAKP 204
>gi|309792427|ref|ZP_07686893.1| histone deacetylase superfamily [Oscillochloris trichoides DG-6]
gi|308225537|gb|EFO79299.1| histone deacetylase superfamily [Oscillochloris trichoides DG6]
Length = 349
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/332 (38%), Positives = 182/332 (54%), Gaps = 30/332 (9%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
+L D R H HPE +R+ AI L +G+ + EA +K LL+VHT
Sbjct: 9 ILSDARFSAHTWYG---HPECADRLDAIMEALATSGLTDDLRSVAPNEAPEKALLAVHTP 65
Query: 77 NHVNLIKNISS---KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
+ + I+++SS Q D YL S +AA AAG+ + +
Sbjct: 66 DLLWRIRHLSSFGGGQID----------GDTYLTYDSWDAALYAAGAAMGAVDVALARHP 115
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
N+AFA+VRPPGHHA P+ AMGFCL NNVAVAA LN G+ ++ IVD+DVHHGN T
Sbjct: 116 NNAFALVRPPGHHATPNRAMGFCLINNVAVAARHALN---RYGLRRVAIVDYDVHHGNGT 172
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGE-GPGLGYNINVPWENGRCGDADY 252
Q F+ +PRVLF S H FYP G +G GP G +N+P G GDA Y
Sbjct: 173 QDAFYDEPRVLFISTHA---APFYPGT--GAMAEVGTPGPAAGTTLNIPLPFG-VGDAGY 226
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
V+D +++P + F P+++++SAG+D+ DPLG ++ GY+ + +L+D A Q
Sbjct: 227 AQVFDELVVPALRRFHPELLLVSAGYDSHWKDPLGPMTLSTSGYAHLTARLLDLAQELCQ 286
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
G+I LEGGY+L ++ +A M +LL +P
Sbjct: 287 GRIAFILEGGYSLEALGACTIATMRLLLGREP 318
>gi|333988288|ref|YP_004520895.1| histone deacetylase superfamily protein [Methanobacterium sp.
SWAN-1]
gi|333826432|gb|AEG19094.1| histone deacetylase superfamily [Methanobacterium sp. SWAN-1]
Length = 350
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/328 (35%), Positives = 181/328 (55%), Gaps = 29/328 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
+ L+Y + KH T + HPEN R+ I N L+ G ++ VL + A ++++L VH
Sbjct: 2 MSLVYSDDYRKHETGN---HPENKERLNVIMNSLKEEGCLEKIDVLEPEAAINEDILRVH 58
Query: 75 TENHVNLIKNISSK-----QFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
T +H+ +K+ FD+ + + + + A LAAG I+ +E V
Sbjct: 59 TRSHLENVKSFCKDGGGYWDFDT------------FASPETYKIAKLAAGGAIKASELVL 106
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
G+ SA+++ RPPGHHA + AMGFC +NN+A+A +L + R + K LI D+DVH+
Sbjct: 107 NGQ-QSAYSLARPPGHHARRNNAMGFCFFNNLAIALEYLRDVR---NMKKFLIFDFDVHY 162
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
GN T + F++DP VL+ S+H+ T +P GF G G GYN+N+P G D
Sbjct: 163 GNGTAETFYEDPNVLYISIHQDP-RTIFPGK--GFIEETGADGGEGYNLNIPMPPG-SAD 218
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309
DY+ + D IL P AK+FG D + GFD DP +++ Y + K++D A G
Sbjct: 219 NDYIFMLDQILEPAAKEFGADFYFLDVGFDGHMDDPFSRIQLSDDFYPWIAGKMLDIA-G 277
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLE 337
+VL LEGGYNL ++S + +NVL++
Sbjct: 278 PMVLILEGGYNLAALSRCNVKLINVLMD 305
>gi|262197232|ref|YP_003268441.1| histone deacetylase [Haliangium ochraceum DSM 14365]
gi|262080579|gb|ACY16548.1| Histone deacetylase [Haliangium ochraceum DSM 14365]
Length = 359
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 177/328 (53%), Gaps = 29/328 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
+G + D+ +H P HPE P RI A+ + L+AA + +R +L +EA + L VH
Sbjct: 3 IGYVLDDVFTEHRPPGS--HPERPERIGAVRDALRAAHLRERATLLPVREASEDELGRVH 60
Query: 75 TENHV-NLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
++ +L + + + D Y + G+ EA AAG+V++VA V +
Sbjct: 61 HAGYLSDLTRTVPGQSGWLD----------GDTYFSPGTWEAVLKAAGAVVDVALGVLDA 110
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
A+VRPPGHHAE D AMGFCL NN+AVAA+ ++ IVDWDVHHGN
Sbjct: 111 RFQRGMALVRPPGHHAEADRAMGFCLINNIAVAAAAARAAG----AARVAIVDWDVHHGN 166
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ +F +DP VLF S H++ FYP G + +G G G+G +NV G GD
Sbjct: 167 GTQHIFEEDPSVLFLSCHQY---PFYPGT--GAPSEVGRGAGVGATVNVGLPAG-AGDRA 220
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM---LKKLMD-FA 307
Y+A + + P + F PDII++SAGFDA DPL G RV+ G+ + L +L D
Sbjct: 221 YMATMNEVFAPALRRFQPDIILLSAGFDAYVDDPLAGMRVSLGGFRALAGTLARLADELC 280
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVL 335
G++ ALEGGY+L + +A ++
Sbjct: 281 GGRLACALEGGYHLKGLGAGTVALLDAF 308
>gi|189220417|ref|YP_001941057.1| deacetylase [Methylacidiphilum infernorum V4]
gi|189187275|gb|ACD84460.1| Deacetylase family enzyme [Methylacidiphilum infernorum V4]
Length = 314
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 179/336 (53%), Gaps = 36/336 (10%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ + E+ +H P G HPE+P RI + KL+ + + + A ++ + V
Sbjct: 4 KTAVFCSEKFAQHRPPSG--HPESPARITQLLPKLREDFL-HSVLWIEPTAAPEQWIQRV 60
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEG-------SSEAAYLAAGSVIEVAE 126
HT ++ R R K + L+ G S E A LA G+ + +
Sbjct: 61 HTPQYIE-------------RVRKTQKGPMVLLDGGDTFAYGPSYEVALLAVGAALNAVD 107
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
+V E+ +AF VRPPGHHA + AMGFCL+N VA+AA + L + G+ K+ I+DWD
Sbjct: 108 KVMSKEIKNAFCFVRPPGHHALANAAMGFCLFNTVAIAARYALEKH---GLKKVFILDWD 164
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
VHHGN TQ +F++DP+V + S+H+ YP G T IG+ GLGY +N+ G
Sbjct: 165 VHHGNGTQDIFYEDPQVFYASLHQF---PHYPGT--GKSTEIGKNEGLGYTLNLCMPRG- 218
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
D+ Y +D ++P + F PD+I+ISAGFDA DPLG +T G+ M + + +
Sbjct: 219 ASDSHYEKAFDEKIIPAIESFKPDMILISAGFDAHKDDPLGEIYLTEQGFEKMTRLIKEA 278
Query: 307 A----QGKIVLALEGGYNLGSISNSVLACMNVLLED 338
A QG+++ LEGGYN+ S+ S+ + + LL D
Sbjct: 279 AERHCQGRMISVLEGGYNIESLYKSIKSHLQALLAD 314
>gi|417781233|ref|ZP_12428985.1| histone deacetylase family protein [Leptospira weilii str.
2006001853]
gi|410778484|gb|EKR63110.1| histone deacetylase family protein [Leptospira weilii str.
2006001853]
Length = 321
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 174/331 (52%), Gaps = 26/331 (7%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNL 70
+K + G +Y E HN H E+ +R+ NKL+ K+ +
Sbjct: 7 MKMKTGFIYSEDFLYHNADPKIPHYESSDRLLVCINKLRQTSYFNSLFFPEMKKVPSEFF 66
Query: 71 LSVHTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV 128
+H+ H+ I+ K+ FDS E S AAY AA S I +A+ +
Sbjct: 67 HEIHSSTHLQKIERSKGKRGYFDSDTP----------FTEKSWIAAYSAANSGITLADAL 116
Query: 129 AEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVH 188
G + + F+++RPPGHHAE + MGFC+ NNVA+ A +L G KI I+DWDVH
Sbjct: 117 LSGTIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQKN----GFKKIFIIDWDVH 172
Query: 189 HGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCG 248
HGN TQ++F++DP V + S+H+ FYP G + G+ G+ N+P +
Sbjct: 173 HGNGTQEIFYQDPNVFYLSIHQF---PFYPMT--GLSSETGKNEGIETTKNIPMQANSDS 227
Query: 249 DADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ 308
A Y+ + +++P + FGPD+++ISAGFDA DPLGG +T G+ + K +++ A
Sbjct: 228 QA-YIQKFKEVVIPTMEHFGPDVVLISAGFDAHKEDPLGGMNITTKGFEDLTKIVLESAD 286
Query: 309 ----GKIVLALEGGYNLGSISNSVLACMNVL 335
GK++ LEGGYNL ++S SV A + V
Sbjct: 287 KICGGKVLSFLEGGYNLTALSESVEAHVAVF 317
>gi|15607064|ref|NP_214446.1| acetoin utilization protein [Aquifex aeolicus VF5]
gi|2984320|gb|AAC07842.1| acetoin utilization protein [Aquifex aeolicus VF5]
Length = 310
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 177/328 (53%), Gaps = 24/328 (7%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
++VG +YD+ KH+ P+ HPEN NR+ +I ++ +GI + + + + AK + +
Sbjct: 2 KKVGFIYDDIYLKHDWPE---HPENKNRLISILEHVEKSGIKKALIDVKPRRAKVEEVAL 58
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H ++ I + L+ Y + + A A G V+E +R+ G
Sbjct: 59 NHDPAYIQEIHDFCKSG--------GGYLDPDTYATPDTYDVALYAVGGVLEGIDRILSG 110
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
EL+ AF VRPPGHHAE +AMGFC++NNVA+ A +L R G+NK+ I+D+D HHGN
Sbjct: 111 ELDRAFCAVRPPGHHAEYAKAMGFCIFNNVAIGAHYL---RKIKGVNKVFIIDFDAHHGN 167
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQK F++D V +FS H + FYP G G G G GY NVP G GD +
Sbjct: 168 GTQKSFYEDDTVFYFSTHEY---PFYPGT--GSEDERGAGKGYGYTYNVPMSAG-AGDDE 221
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM---DFAQ 308
Y+ V++ +L + F PD +++SAG+D DPL V+ G +++ ++ D
Sbjct: 222 YIPVYEKLLPELMNRFSPDFVLVSAGYDLHRDDPLTYLNVSNEGVRQIVRNIIKTSDELN 281
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLL 336
++ ALEGGYNL ++ V+ + +L
Sbjct: 282 APVLFALEGGYNLKALGECVVITLEEML 309
>gi|395541068|ref|XP_003772470.1| PREDICTED: histone deacetylase 7 isoform 6 [Sarcophilus harrisii]
Length = 865
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 192/387 (49%), Gaps = 80/387 (20%)
Query: 9 RTIKRRVGLLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
RT+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 474 RTLPYTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKAS 533
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKL-----------------NSIYLNEG 109
+ L SVH E HV L + ++A L ++I+
Sbjct: 534 LEELQSVHDERHVLLYGTNPLSRLKLDNGKLAGILAQRMFVMLPCGGVGVDTDTIWNELH 593
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLL 169
SS AA AAGSV ++A +VA EL
Sbjct: 594 SSNAARWAAGSVTDLAFKVAARELK----------------------------------- 618
Query: 170 NERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG 229
DVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G
Sbjct: 619 ----------------DVHHGNGTQQTFYEDPSVLYISLHRHDDGNFFPGS--GAVDEVG 660
Query: 230 EGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--D 284
G G G+NINV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 661 AGNGEGFNINVAWAGGLDPPMGDPEYLAAFRTVVMPIAQEFSPDLVMVSAGFDAADGHPP 720
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS 344
PLGG V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S
Sbjct: 721 PLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVTALLGNKVDPLS 780
Query: 345 SEAY---PFESTWRVIQAVRKKLSAFW 368
E++ P + R ++AV + S +W
Sbjct: 781 EESWKQKPNLNAIRSLEAVIRVHSKYW 807
>gi|119593925|gb|EAW73519.1| histone deacetylase 10, isoform CRA_i [Homo sapiens]
Length = 618
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 181/362 (50%), Gaps = 72/362 (19%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
LL+D+ C+ E P R+ A ++L+ G+ QRC+ L+A+EA ++ L VH+
Sbjct: 16 LLWDDPECEI---------ERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHST 66
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
H A LAAG+ +++ + V G + +
Sbjct: 67 FHC----------------------------------ARLAAGAGLQLVDAVLTGAVQNG 92
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
A+VRPPGHH + A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG Q +
Sbjct: 93 LALVRPPGHHGQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQGIQYL 149
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW
Sbjct: 150 FEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW-------------- 195
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALE 316
F P+++++SAGFD+A GDP G + TP ++ + + L A G++ LE
Sbjct: 196 --------NQFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAVLE 247
Query: 317 GGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFE----STWRVIQAVRKKLSAFWPTLA 372
GGY+L S++ SV + LL D S P + S IQ+ R + W +L
Sbjct: 248 GGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQRCEGSALESIQSARAAQAPHWKSLQ 307
Query: 373 DE 374
+
Sbjct: 308 QQ 309
>gi|298675423|ref|YP_003727173.1| histone deacetylase superfamily protein [Methanohalobium
evestigatum Z-7303]
gi|298288411|gb|ADI74377.1| histone deacetylase superfamily [Methanohalobium evestigatum
Z-7303]
Length = 337
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 174/322 (54%), Gaps = 26/322 (8%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
++Y KHNT + HPE+ R+ L+ + + ++ A+ + ++HT
Sbjct: 4 IIYHPDYLKHNTGN---HPESSIRLSHAVEYLEKQDVFKNHPLVEPNTAEISQIQTIHTP 60
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSA 136
+++ ++ + + D + SK S AA LAAG I NSA
Sbjct: 61 DYIKKVEYHCNNEIPLDPDTVVSK--------DSYRAALLAAGGSIRAVNETYTN--NSA 110
Query: 137 FAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKM 196
FA+VRPPGHHAE D A GFCL+NN+A+AA + ++ G+ ++LI+DWDVHHGN TQ
Sbjct: 111 FALVRPPGHHAESDRAKGFCLFNNIAIAAKYAQSQ----GMKRVLIIDWDVHHGNGTQHS 166
Query: 197 FWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVW 256
F+ D V++ S HR+ ++P G+ G G G GYNINVP G D +Y V+
Sbjct: 167 FYSDSTVMYMSTHRY---PWFPGT--GWMDETGSGEGEGYNINVPLFAGSTDD-EYAYVF 220
Query: 257 DHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVM---LKKLMDFAQGKIVL 313
D I +PVA F PDII++SAG DA D LGG ++T G++ + +K++ D + +L
Sbjct: 221 DKIFMPVALQFQPDIIMVSAGMDAQENDMLGGMKLTSEGFATLAGYIKRIADLTCKQFIL 280
Query: 314 ALEGGYNLGSISNSVLACMNVL 335
LEGGY ++ S+ + +
Sbjct: 281 VLEGGYQHEKLAESIYQVITAI 302
>gi|393908573|gb|EJD75115.1| histone deacetylase, variant [Loa loa]
Length = 476
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 164/297 (55%), Gaps = 15/297 (5%)
Query: 47 KLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL 106
K Q +G+ RC L ++A ++L VH+ +V I + +++AS + IY
Sbjct: 31 KFQNSGLLNRCTHLKTRKADLEDLCLVHSRTYVERIAATREMNLE-ELEKLASTFDDIYF 89
Query: 107 NEGSSEAAYLAAGSVIEVAERV-AEGEL-NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
N S E A ++ G ++ E V +EGE +S+FA +RPPGHHA ++A GFC++NNVA+
Sbjct: 90 NNYSYEVATISVGVALQAMEAVLSEGERKSSSFAAIRPPGHHASCEKACGFCIFNNVAIC 149
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGF 224
A + LG+ K+LIVDWDVH G TQ +P++ S+HR+E G F+P +
Sbjct: 150 A----KKARALGVEKVLIVDWDVHAGQGTQYAIEDEPKIKLISIHRYEHGLFWPYLPES- 204
Query: 225 YTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284
G INVP GD++Y+A H ++P+ DF P +I++S GFDA GD
Sbjct: 205 ----GISHRYKNTINVPLNTVGMGDSEYIAFIQHFVVPIIHDFMPGLILVSCGFDAGFGD 260
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQG---KIVLALEGGYNLGSISNSVLACMNVLLED 338
P G V+P GY M K ++D A + + LEGGY + S++ V C+ LL D
Sbjct: 261 PEGNMNVSPAGYYWMTKLVLDAATAIGSPLCMVLEGGYFIDSLTYGVQFCIKALLGD 317
>gi|392341679|ref|XP_003754395.1| PREDICTED: histone deacetylase 7 isoform 5 [Rattus norvegicus]
gi|392349721|ref|XP_003750454.1| PREDICTED: histone deacetylase 7 isoform 4 [Rattus norvegicus]
Length = 868
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 214/438 (48%), Gaps = 90/438 (20%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 485 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 544
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 545 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 604
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL
Sbjct: 605 WAAGSVTDLAFKVASRELK----------------------------------------- 623
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
DVHHGN TQ+ F++DPRVL+ S+HRH+ G F+P + G +G G G G
Sbjct: 624 ----------DVHHGNGTQQTFYQDPRVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 671
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 672 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 731
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 732 VSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSQESWKQ 791
Query: 349 -PFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTKVETLEA 407
P + R ++AV + +W + +L S P + +D+E VE + A
Sbjct: 792 KPNLNAIRSLEAVVRVHRKYWGCM-----QRLASCPDPWLPRVPGADAE-----VEAVTA 841
Query: 408 VLQVALSKLKVDDGHAEL 425
+ +++ L D EL
Sbjct: 842 LASLSVGILAEDRPSKEL 859
>gi|393908572|gb|EFO15574.2| histone deacetylase [Loa loa]
Length = 523
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 164/297 (55%), Gaps = 15/297 (5%)
Query: 47 KLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL 106
K Q +G+ RC L ++A ++L VH+ +V I + +++AS + IY
Sbjct: 31 KFQNSGLLNRCTHLKTRKADLEDLCLVHSRTYVERIAATREMNLE-ELEKLASTFDDIYF 89
Query: 107 NEGSSEAAYLAAGSVIEVAERV-AEGEL-NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
N S E A ++ G ++ E V +EGE +S+FA +RPPGHHA ++A GFC++NNVA+
Sbjct: 90 NNYSYEVATISVGVALQAMEAVLSEGERKSSSFAAIRPPGHHASCEKACGFCIFNNVAIC 149
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGF 224
A + LG+ K+LIVDWDVH G TQ +P++ S+HR+E G F+P +
Sbjct: 150 AK----KARALGVEKVLIVDWDVHAGQGTQYAIEDEPKIKLISIHRYEHGLFWP-----Y 200
Query: 225 YTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284
G INVP GD++Y+A H ++P+ DF P +I++S GFDA GD
Sbjct: 201 LPESGISHRYKNTINVPLNTVGMGDSEYIAFIQHFVVPIIHDFMPGLILVSCGFDAGFGD 260
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQG---KIVLALEGGYNLGSISNSVLACMNVLLED 338
P G V+P GY M K ++D A + + LEGGY + S++ V C+ LL D
Sbjct: 261 PEGNMNVSPAGYYWMTKLVLDAATAIGSPLCMVLEGGYFIDSLTYGVQFCIKALLGD 317
>gi|359786372|ref|ZP_09289507.1| histone deacetylase superfamily protein [Halomonas sp. GFAJ-1]
gi|359296222|gb|EHK60475.1| histone deacetylase superfamily protein [Halomonas sp. GFAJ-1]
Length = 362
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/306 (41%), Positives = 172/306 (56%), Gaps = 22/306 (7%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
+PE+P R+KAI L+ A I + + K A + L VHT ++++ I F R
Sbjct: 45 YPEHPGRLKAIQLLLEKAPI-KGLKIEGGKAATAEQLARVHTTSYLSDI-------FSLR 96
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
+++ ++ GS +AA +AAG+ I E V E SAFA++RPPGHHAEP A
Sbjct: 97 GKNAWLDVDTTAVSPGSVDAAEVAAGTAIAAVEAVMEKRTQSAFALIRPPGHHAEPVRAR 156
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL+NNVAVAA+ + R LG ++LI+DWD HHGN TQ +FW DP V+FF +HR
Sbjct: 157 GFCLFNNVAVAAA---HARSALGCERVLIIDWDAHHGNGTQDIFWADPDVMFFDIHRA-- 211
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
FYP + G +G G G G INVP G GD YL + IL P A F PDII+
Sbjct: 212 APFYPGS--GHLEEVGAGLGEGTTINVPLPAG-AGDEAYLKAFRDILAPAAAWFKPDIIL 268
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGSISNSVL 329
+SAGFD D V+ G+ + L A +G++V LEGGYNL S++N
Sbjct: 269 VSAGFDPHWHDL--ALNVSYEGFGALTGALQQLADQHCEGRLVFVLEGGYNLESLANGTR 326
Query: 330 ACMNVL 335
A + VL
Sbjct: 327 AVLAVL 332
>gi|451946710|ref|YP_007467305.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
gi|451906058|gb|AGF77652.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
Length = 354
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 189/329 (57%), Gaps = 24/329 (7%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
R+ +L D H+ G HPE+P R+K I L + + C V E +++
Sbjct: 2 RKTAVLRDSLFLDHDP--GFDHPESPQRLKVINEVLDKEEV-KDCFVYPDFEPASHDIIG 58
Query: 73 V-HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
+ H ++ ++ + + K FD+ + +S AA LAAG++++ + + EG
Sbjct: 59 LNHGKDLIDRVAETAGKIFDALDPDTKTSPDSY-------AAAILAAGALVKGVDLLVEG 111
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+++ FA+VRPPGHHAE D +MGFCL+NNVAVAA + ++ + +++IVDWD+HHGN
Sbjct: 112 AVDNGFALVRPPGHHAERDRSMGFCLFNNVAVAAKYAISHHK---MKRVMIVDWDLHHGN 168
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ F+ VL+ S H++ +YP G T G+G G GY IN+P G GD D
Sbjct: 169 GTQNSFYDSDMVLYVSTHQY---PYYPGT--GAVTETGKGKGDGYTINIPLP-GYQGDID 222
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA---- 307
Y ++D I++P+ K++ P++I+IS GFD GDPLG VT G++ + + ++ A
Sbjct: 223 YATIFDDIIVPIGKEYNPELILISCGFDIYKGDPLGAMEVTAPGFAYLTRAMVQLAETVC 282
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLL 336
+G++++ LEGGY+L + +A ++ LL
Sbjct: 283 EGRLLVTLEGGYDLNGQRDGAMAVLSELL 311
>gi|359690295|ref|ZP_09260296.1| acetoin-histone deacetylase [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750553|ref|ZP_13306839.1| histone deacetylase family protein [Leptospira licerasiae str.
MMD4847]
gi|418758738|ref|ZP_13314920.1| histone deacetylase family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384114640|gb|EIE00903.1| histone deacetylase family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404273156|gb|EJZ40476.1| histone deacetylase family protein [Leptospira licerasiae str.
MMD4847]
Length = 308
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 179/325 (55%), Gaps = 23/325 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
++G YD+ H T G +HPE+P R+++I N+L + + + + + V
Sbjct: 2 KLGYAYDDTFLLHET--GTFHPESPQRLESILNRLYKTSYFKDLHWIKPNKLPLELIDPV 59
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H + H I K+ D S E S +AA LAAGS +++ ++ E+
Sbjct: 60 HNQRHRERFSVIQGKRGSFDGDTPYS--------ESSFDAALLAAGSGVDLVNKIRSNEI 111
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
S A+VRPPGHHAE +MGFCL NN+A+ A++LL++ GI K+ I+DWDVHHGN T
Sbjct: 112 ESGIALVRPPGHHAETGRSMGFCLLNNIAITANYLLSQ----GIEKVYILDWDVHHGNGT 167
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q++F+ +V F S+H++ +YP G GEG G + +N+P G GD +YL
Sbjct: 168 QEIFYDSDKVFFTSLHQY---PYYPGT--GSVHEKGEGKGQNFTLNIPLSMG-SGDKEYL 221
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ---GK 310
+ +++P +F P+ ++ISAGFD DPL G ++ ++ + ++ + K
Sbjct: 222 HYFQEVVVPSVLEFQPEYVLISAGFDGHKRDPLAGMNLSTNAFAEFTRLILSATKQIGSK 281
Query: 311 IVLALEGGYNLGSISNSVLACMNVL 335
+ LEGGY+LG+++ SV A + VL
Sbjct: 282 TISFLEGGYDLGALAESVEAHVAVL 306
>gi|290975582|ref|XP_002670521.1| histone deacetylase [Naegleria gruberi]
gi|284084081|gb|EFC37777.1| histone deacetylase [Naegleria gruberi]
Length = 514
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 195/352 (55%), Gaps = 39/352 (11%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWN-KLQAAGIPQRCVVLNAKEAKDKNLL 71
+R +++D+RM H HPE+P R+ IW+ ++ + C ++ ++A + L
Sbjct: 146 KRTVIMFDKRMGLHMGRGS--HPESPARLSGIWSFAIEEFHFDKGCTIIEGRKATREELE 203
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H+ +HV+ + + F+ D +++ E S +AA +A+G +IE+A +V G
Sbjct: 204 WTHSPHHVDAVMASHLEMFNFSTD--------VFVGEQSGDAARVASGGLIEIATKVMNG 255
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
E ++ FAI+RPPGHH D+A GFC+ NNVAVAA+ L+ +I+IVDWDVHHGN
Sbjct: 256 EFDNGFAIIRPPGHHCYFDKASGFCIVNNVAVAANVLVKRSL---AKRIVIVDWDVHHGN 312
Query: 192 STQKMFW---------------KDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
TQ + + P ++FFS+H+ + FYP G I +
Sbjct: 313 GTQAILEDQFKERFDNCNPNNDEKPEIIFFSLHQTK-NNFYPKT--GTLEQIAYEGAKKF 369
Query: 237 NINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGG--CRVTPY 294
N+P++ GD + L ++ I++P+A ++ PDI+++SAGFDA GD LGG C +
Sbjct: 370 IFNIPFDETY-GDQEILNAFEQIIMPIASNYNPDIVLVSAGFDAVKGDKLGGQLCSQQLF 428
Query: 295 GY-SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSS 345
G+ + MLK L A GKIVLALEGGYN+ + V C++VL +P SS
Sbjct: 429 GHLTCMLKTL---ANGKIVLALEGGYNIQETAGCVKECVSVLCGQEPQGLSS 477
>gi|348580249|ref|XP_003475891.1| PREDICTED: histone deacetylase 7-like isoform 4 [Cavia porcellus]
Length = 876
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 200/388 (51%), Gaps = 80/388 (20%)
Query: 8 GRTIKRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEA 65
+T+ GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A
Sbjct: 485 AKTLPFITGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKA 544
Query: 66 KDKNLLSVHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNE 108
+ L SVH+E H+ L +S + D+ + + +A ++ ++I+
Sbjct: 545 SLEELQSVHSERHMLLYGTNPLSRLKLDNEKLSELLAQRMFVMLPCGGVGVDTDTIWNEL 604
Query: 109 GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFL 168
SS AA AAGSV ++A +VA EL
Sbjct: 605 HSSNAARWAAGSVTDLAFKVASRELK---------------------------------- 630
Query: 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMI 228
DVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +
Sbjct: 631 -----------------DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVEEV 671
Query: 229 GEGPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD- 284
G G G G+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G
Sbjct: 672 GAGSGEGFNVNVAWAGGLEPPMGDPEYLAAFRIVVMPIAQEFSPDLVLVSAGFDAAEGHP 731
Query: 285 -PLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAG 343
PLGG V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K
Sbjct: 732 APLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPL 791
Query: 344 SSEAY---PFESTWRVIQAVRKKLSAFW 368
S E++ P + R ++AV + S +W
Sbjct: 792 SEESWKQKPNLNAIRSLEAVIRVHSKYW 819
>gi|195352822|ref|XP_002042910.1| GM11498 [Drosophila sechellia]
gi|194126957|gb|EDW49000.1| GM11498 [Drosophila sechellia]
Length = 1130
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 150/249 (60%), Gaps = 25/249 (10%)
Query: 12 KRRVGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKN 69
K GL YD M KH+ GD HPE+ R++++W +L + +RC L A++A +
Sbjct: 818 KVTTGLAYDPLMLKHSCICGDNAQHPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEE 877
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL---------------NEG-SSEA 113
L +VHTE H L S Q R ++ + L++ ++ NE ++ A
Sbjct: 878 LQTVHTEAHAMLF---GSNQCQLSRPKLENTLSASFVRLSCGGLGVDLDTTWNEHHTATA 934
Query: 114 AYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERP 173
A +AAG VI++A + A+G+L + FA+VRPPGHHAE + AMGFC +N++A+AA L P
Sbjct: 935 ARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMP 994
Query: 174 ELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPG 233
E + +ILIVDWDVHHGN TQ+ F++ P +L+ S+HRH+ G F+P G T G G G
Sbjct: 995 E--VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAG 1050
Query: 234 LGYNINVPW 242
LG+N+N+ W
Sbjct: 1051 LGFNVNISW 1059
>gi|219850430|ref|YP_002464863.1| histone deacetylase superfamily protein [Chloroflexus aggregans DSM
9485]
gi|219544689|gb|ACL26427.1| histone deacetylase superfamily [Chloroflexus aggregans DSM 9485]
Length = 352
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 182/316 (57%), Gaps = 29/316 (9%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS---KQF 90
H E+ R++AI LQ +G+ + L + A + LL+VH+ + ++ ++ ++S Q
Sbjct: 19 HVEHAGRLQAIQRALQTSGLLPSLMQLPIRAATEAELLAVHSSHMLHRVRQLASYGGGQI 78
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD 150
DS Y+ S + LAAG+ I + E +AEG ++ FA+VRPPGHHA
Sbjct: 79 DS----------DTYVTADSWDVGLLAAGATIAMVEAIAEGRCHNGFALVRPPGHHATDV 128
Query: 151 EAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHR 210
+MGFCL+NN+A+AA LL+ I ++ IVD+DVHHGN TQ +F++D RVLF S H
Sbjct: 129 RSMGFCLFNNIAIAARVLLD---RYDIRRLAIVDFDVHHGNGTQDIFYRDGRVLFCSTHA 185
Query: 211 HEFGTFYPANDDGFYTMIGEGPGL--GYNINVPWENGRCGDADYLAVWDHILLPVAKDFG 268
YP + T G+ P + G +NVP G GD Y V+ ++ P F
Sbjct: 186 ---SPLYPGTGAVYET--GD-PHMANGTTLNVPLPYG-TGDEGYDRVFRQVIGPAIHQFQ 238
Query: 269 PDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSI 324
P+I+++SAGFDA DP+G ++ +G++ +++ L+ +AQ G+I LEGGYN+ ++
Sbjct: 239 PEILLVSAGFDAHWSDPIGPMALSVHGFARLVQHLLTWAQTLCNGRIGFVLEGGYNIAAL 298
Query: 325 SNSVLACMNVLLEDKP 340
+ SV+A + ++L P
Sbjct: 299 TASVIATLRLMLGMDP 314
>gi|359684037|ref|ZP_09254038.1| histone deacetylase [Leptospira santarosai str. 2000030832]
gi|410447986|ref|ZP_11302074.1| histone deacetylase family protein [Leptospira sp. Fiocruz LV3954]
gi|418744203|ref|ZP_13300559.1| histone deacetylase family protein [Leptospira santarosai str.
CBC379]
gi|418751647|ref|ZP_13307929.1| histone deacetylase family protein [Leptospira santarosai str.
MOR084]
gi|421111560|ref|ZP_15572034.1| histone deacetylase family protein [Leptospira santarosai str. JET]
gi|409967950|gb|EKO35765.1| histone deacetylase family protein [Leptospira santarosai str.
MOR084]
gi|410018191|gb|EKO80235.1| histone deacetylase family protein [Leptospira sp. Fiocruz LV3954]
gi|410794654|gb|EKR92554.1| histone deacetylase family protein [Leptospira santarosai str.
CBC379]
gi|410802969|gb|EKS09113.1| histone deacetylase family protein [Leptospira santarosai str. JET]
gi|456876209|gb|EMF91332.1| histone deacetylase family protein [Leptospira santarosai str.
ST188]
Length = 313
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 172/327 (52%), Gaps = 26/327 (7%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G LY + HN H E+ +R+ A NKL K+ + +H
Sbjct: 3 TGFLYSQDFLYHNADPKIPHYESSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEFFNEIH 62
Query: 75 TENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+ H+ I+ K+ FDS E S AAY AA S I +A+ + G
Sbjct: 63 SNAHLQKIERSKGKRGYFDSDTP----------FTEKSWIAAYSAANSGITLADALLSGT 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L G KI I+DWDVHHGN
Sbjct: 113 IKNGFSLLRPPGHHAERNRIMGFCILNNVAITARYLQKN----GFKKIFIIDWDVHHGNG 168
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++DP V + S+H+ FYP G + G+ G+G N+P + + Y
Sbjct: 169 TQEIFYQDPNVFYLSIHQFP---FYPMT--GLSSEAGKDEGIGTTKNIPMQ-ANSDNQSY 222
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ---- 308
+ + +++P + FGPDI+++SAGFDA DPLGG +T G+ + K +++ A
Sbjct: 223 IQKFKEVVIPTMEHFGPDIVLLSAGFDAHKEDPLGGMNITTKGFEDLTKIVLESADKICG 282
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVL 335
GK++ LEGGY+L ++S SV + VL
Sbjct: 283 GKVLSFLEGGYDLTALSESVETHVAVL 309
>gi|410624494|ref|ZP_11335291.1| histone deacetylase 5 [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410156001|dbj|GAC30665.1| histone deacetylase 5 [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 373
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 185/346 (53%), Gaps = 33/346 (9%)
Query: 14 RVGLLYDERMCKHNT-------PDG-DYHP----ENPNRIKAIWNKLQAAGIPQRCVVLN 61
+ L+++ER HNT P G D P ENP + I N L A+ + + ++
Sbjct: 3 KTALVWNERYMWHNTGNAAGIMPAGFDVQPLQHVENPETKRRIKNLLDASKLTNKLHLIE 62
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSV 121
+ A D +L VHT ++N + ++ D A + +N S + A LAAG V
Sbjct: 63 DRVASDAEILKVHTPRYLNQLVELNKTGGD------AGPFTPMSVN--SLDIARLAAGGV 114
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+E+ V + ++ + +A+VRPPGHHA D MGFCL NN A++A L+ L + KI
Sbjct: 115 MELTSAVVKRQVKNGYALVRPPGHHAVADGGMGFCLLNNAAISAHHALD---NLNLKKIA 171
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
VDWDVHHGN + +F++DPRVL SVH+ F P D G IG G G G+N+N+P
Sbjct: 172 FVDWDVHHGNGAESIFYEDPRVLTISVHQER--CFPP--DTGDNQDIGSGEGRGFNLNIP 227
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYS---- 297
G G YLA ++ ++LP F PD+II+ +GFDA DPLG +T GY
Sbjct: 228 LPAG-TGLGGYLACFERVVLPALYKFSPDLIIVPSGFDAGIYDPLGRQMMTSSGYRRLTH 286
Query: 298 VMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLL-EDKPVA 342
++LK + G++V+ EGGYN ++ LA + L ED +A
Sbjct: 287 MLLKAADELCDGRLVMCHEGGYNPSTVPYHGLAVLEALSGEDSGIA 332
>gi|418735717|ref|ZP_13292126.1| histone deacetylase family protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410748656|gb|EKR01551.1| histone deacetylase family protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 313
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 172/328 (52%), Gaps = 26/328 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ G +Y + HN H EN +R+ A NKL K+ + +
Sbjct: 2 KTGFIYSKDFLYHNADPKIPHYENSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEFFNEI 61
Query: 74 HTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H+ H+ I+ K+ FDS E S AAY AA S I +A+ + G
Sbjct: 62 HSSAHLQKIERSKGKRGYFDSDTP----------FTEKSWIAAYSAANSGITLADALISG 111
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L G KI I+DWDVHHGN
Sbjct: 112 TIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQKN----GFKKIFIIDWDVHHGN 167
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ++F++DP V + S+H+ FYP G + G+ G+G N+P + A
Sbjct: 168 GTQEIFYQDPNVFYLSIHQF---PFYPMT--GLSSETGKNEGIGTTKNIPMQANSDNQA- 221
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA---- 307
Y+ + +++P + F PDI++ISAGFDA DPLG +T G+ + K +++ A
Sbjct: 222 YIQKFKEVVIPTMEHFEPDIVLISAGFDAHKEDPLGEMDITTKGFEDLTKIVLESADKIC 281
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVL 335
+GK++ LEGGYNL ++S SV A + V
Sbjct: 282 EGKVLSFLEGGYNLTALSESVEAHVAVF 309
>gi|170573023|ref|XP_001892323.1| Histone deacetylase family protein [Brugia malayi]
gi|158602382|gb|EDP38855.1| Histone deacetylase family protein [Brugia malayi]
Length = 600
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 185/379 (48%), Gaps = 71/379 (18%)
Query: 17 LLYDERMCKHNTPDGDY--HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+YD M +H G+ H E+ R+++IW++LQ G+ ++C + A++A + L +VH
Sbjct: 244 LVYDPAMARHQCFCGNNRNHVEHGERVQSIWSRLQERGLVEKCERVFARKAPLEMLRTVH 303
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKL------------NSIYLNEGSSE-AAYLAAGSV 121
+V + ++ K + Y N+ S++ AA +A GS+
Sbjct: 304 AATYVTFFAVSPTACLKMEPSQLPVKSFVQLSCGGIGVDSDTYFNDASTQLAARIAVGSL 363
Query: 122 IEVA-ERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
E+A +R AE ++I
Sbjct: 364 AELALQRCAEQ---------------------------------------------CSRI 378
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
I+DWDVHHGN TQ F DP VL+ S+HRH+ G F+P G T +G G G GY +N+
Sbjct: 379 AIIDWDVHHGNGTQICFEADPSVLYLSLHRHDNGNFFPGT--GAVTEVGVGSGKGYTVNI 436
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDP--LGGCRVTPYGYSV 298
P+ DADYLA W I+ P+ F P II+SAGFDAA G P LGG ++P +
Sbjct: 437 PFSGEMMDDADYLAAWRVIVAPILNQFKPTFIIVSAGFDAACGHPQALGGYNLSPQLFGY 496
Query: 299 MLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKP-VAG-----SSEAYPFES 352
+LM++A G++VLALEGGY+L +IS+S C+ L + P AG + A+P +S
Sbjct: 497 FTLQLMNYAGGRVVLALEGGYDLDTISDSAEECVKALCGESPETAGKLSDEALNAFPKQS 556
Query: 353 TWRVIQAVRKKLSAFWPTL 371
IQ V +WP+L
Sbjct: 557 AQETIQKVIAIHKKYWPSL 575
>gi|83753890|pdb|1ZZ0|A Chain A, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753891|pdb|1ZZ0|B Chain B, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753892|pdb|1ZZ0|C Chain C, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753893|pdb|1ZZ0|D Chain D, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753894|pdb|1ZZ1|A Chain A, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753895|pdb|1ZZ1|B Chain B, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753896|pdb|1ZZ1|C Chain C, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753897|pdb|1ZZ1|D Chain D, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753898|pdb|1ZZ3|A Chain A, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|83753899|pdb|1ZZ3|B Chain B, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|83753900|pdb|1ZZ3|C Chain C, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|83753901|pdb|1ZZ3|D Chain D, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|145579387|pdb|2GH6|A Chain A, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
gi|145579388|pdb|2GH6|B Chain B, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
gi|145579389|pdb|2GH6|C Chain C, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
gi|145579390|pdb|2GH6|D Chain D, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
Length = 369
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 165/293 (56%), Gaps = 19/293 (6%)
Query: 33 YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS-KQFD 91
+H +P+ + + A+G + + A A D ++L H+ H+ +K +S+
Sbjct: 35 HHLAHPDTKRRFHELVCASGQIEHLTPIAAVAATDADILRAHSAAHLENMKRVSNLPTGG 94
Query: 92 SRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDE 151
D I + G E A L+AG +E+ RVA GEL++ +A+V PPGHHA +
Sbjct: 95 DTGDGIT------MMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPGHHAPHNA 148
Query: 152 AMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH 211
AMGFC++NN +VAA + R LG+ ++ I+DWDVHHGN TQ ++W DP VL S+H+H
Sbjct: 149 AMGFCIFNNTSVAAGY---ARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQH 205
Query: 212 EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
F P D G+ T G G G GYNINVP G G+A YL D ++LP + + P +
Sbjct: 206 L--CFPP--DSGYSTERGAGNGHGYNINVPLPPG-SGNAAYLHAMDQVVLPALRAYRPQL 260
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYN 320
II+ +GFDA+ DPL VT G+ M ++ +D A G+IV EGGY+
Sbjct: 261 IIVGSGFDASMLDPLARMMVTADGFRQMARRTIDCAADICDGRIVFVQEGGYS 313
>gi|164519535|pdb|2VCG|A Chain A, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
gi|164519536|pdb|2VCG|B Chain B, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
gi|164519537|pdb|2VCG|C Chain C, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
gi|164519538|pdb|2VCG|D Chain D, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
Length = 375
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 165/293 (56%), Gaps = 19/293 (6%)
Query: 33 YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS-KQFD 91
+H +P+ + + A+G + + A A D ++L H+ H+ +K +S+
Sbjct: 41 HHLAHPDTKRRFHELVCASGQIEHLTPIAAVAATDADILRAHSAAHLENMKRVSNLPTGG 100
Query: 92 SRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDE 151
D I + G E A L+AG +E+ RVA GEL++ +A+V PPGHHA +
Sbjct: 101 DTGDGIT------MMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPGHHAPHNA 154
Query: 152 AMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH 211
AMGFC++NN +VAA + R LG+ ++ I+DWDVHHGN TQ ++W DP VL S+H+H
Sbjct: 155 AMGFCIFNNTSVAAGY---ARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQH 211
Query: 212 EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
F P D G+ T G G G GYNINVP G G+A YL D ++LP + + P +
Sbjct: 212 L--CFPP--DSGYSTERGAGNGHGYNINVPLPPG-SGNAAYLHAMDQVVLPALRAYRPQL 266
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYN 320
II+ +GFDA+ DPL VT G+ M ++ +D A G+IV EGGY+
Sbjct: 267 IIVGSGFDASMLDPLARMMVTADGFRQMARRTIDCAADICDGRIVFVQEGGYS 319
>gi|170585057|ref|XP_001897304.1| Histone deacetylase family protein [Brugia malayi]
gi|158595283|gb|EDP33849.1| Histone deacetylase family protein [Brugia malayi]
Length = 472
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 173/332 (52%), Gaps = 40/332 (12%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+V + D M +H + DYH E+P R+ A+ KL+ K+A ++L
Sbjct: 3 QRKVYIGTDRAMLQHRC-EWDYHLEHPERLSAVLEKLEP------------KKANLEDLC 49
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV-AE 130
VH+ +V I + ++IAS + +Y N S EAA ++ G ++ E V +
Sbjct: 50 LVHSRTYVERIAQTRNMDLVEELEKIASTFDDVYFNNYSYEAAAISVGISLQAMEAVLXD 109
Query: 131 GEL-NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
GE +S+FAI+RPPGHHA + A GFC++NN LG+ K+LIVDWDVH
Sbjct: 110 GERKSSSFAIIRPPGHHASRERACGFCIFNNART-----------LGVEKVLIVDWDVHA 158
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
G TQ DP++ S+HR++ G F+P P INVP GD
Sbjct: 159 GQGTQYAVEDDPKIKLISIHRYQHGLFWP-----------HLPENKNTINVPLNGVGMGD 207
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ- 308
++Y+A H ++P+ DF P +I+IS+GFDA GD G V+P GY M K ++D A
Sbjct: 208 SEYIAFVQHFVVPIIYDFVPSLILISSGFDAGFGDEEGNMNVSPAGYYWMTKLILDAATT 267
Query: 309 --GKIVLALEGGYNLGSISNSVLACMNVLLED 338
+ + +EGGY + S++ V C+ LL D
Sbjct: 268 VGSPLCMLMEGGYFIDSLAYGVQFCIKALLND 299
>gi|440894420|gb|ELR46883.1| Histone deacetylase 9, partial [Bos grunniens mutus]
Length = 894
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 156/268 (58%), Gaps = 27/268 (10%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
G+ YD M KH G+ HPE+ RI++IW++LQ G+ +C + ++A + +
Sbjct: 632 TGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQL 691
Query: 73 VHTENHVNL--IKNISSKQFDSR------RDRIASKL---------NSIYLNEGSSEAAY 115
VH+E+H L + ++ D R + S L ++I+ SS AA
Sbjct: 692 VHSEHHSLLYGTNPLDGQKLDPRTLLGDSSQKFFSSLPCGGLGVDSDTIWNELHSSGAAR 751
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
+A G VIE+A RVA GEL + FA+VRPPGHHAE AMGFC +N+VA+ A +L R +L
Sbjct: 752 MAVGCVIELASRVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYL---RDQL 808
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
I+KILIVD DVHHGN TQ+ F+ DP +L+ S+HR++ G F+P + G +G G G G
Sbjct: 809 NISKILIVDLDVHHGNGTQQAFYADPNILYISLHRYDEGNFFPGS--GAPNEVGTGLGEG 866
Query: 236 YNINVPWENG---RCGDADYLAVWDHIL 260
YNIN+ W G GD +YL + +L
Sbjct: 867 YNINIAWTGGLDPPMGDIEYLEAFRLVL 894
>gi|324073186|ref|NP_001191209.1| histone deacetylase 7 isoform 7 [Mus musculus]
Length = 868
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 192/381 (50%), Gaps = 80/381 (20%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 485 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 544
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 545 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 604
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL
Sbjct: 605 WAAGSVTDLAFKVASRELK----------------------------------------- 623
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
DVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 624 ----------DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 671
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 672 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 731
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 732 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 791
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 792 KPNLSAIRSLEAVVRVHRKYW 812
>gi|419968520|ref|ZP_14484360.1| histone deacetylase superfamily protein [Rhodococcus opacus M213]
gi|414566075|gb|EKT76928.1| histone deacetylase superfamily protein [Rhodococcus opacus M213]
Length = 374
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 172/318 (54%), Gaps = 25/318 (7%)
Query: 29 PDG-----DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIK 83
PDG D H + ++ N L+ +G+ + + + A + L VH +V ++
Sbjct: 27 PDGMTIQPDKHVYDLEVVRRFRNLLEVSGLLDQLTKVAPRHATEAELTRVHPAEYVEEVR 86
Query: 84 NISSKQFDSRRDRIASKLNSIY--LNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVR 141
+S +S++ + G+ E A LAAG I E V GE+++A+A++R
Sbjct: 87 ALSELPMGGEGK------SSVFAPVPRGAFEIASLAAGGAIAAVEAVVNGEVDNAYALLR 140
Query: 142 PPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDP 201
P GHHAEPD +MGFC+++N A+AA LL+ E G+N++ ++DWDVHHGN TQ + DP
Sbjct: 141 PAGHHAEPDRSMGFCIFSNAAIAARHLLD---ECGVNRVALIDWDVHHGNGTQASLYDDP 197
Query: 202 RVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILL 261
R L SVH+ F P DDGF IG G G N+N+P G C A Y V+D +++
Sbjct: 198 RALTISVHQDRL--FPP--DDGFVDQIGVGAAEGTNLNIPLPAG-CTSAAYNEVYDRVVI 252
Query: 262 PVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM----DFAQGKIVLALEG 317
P + F P+III+ +GFDA DP+G + GY + +KLM D G++V EG
Sbjct: 253 PALETFRPEIIIVPSGFDAGHMDPMGRMLMHSQGYRELTRKLMKAADDLCGGRMVFLHEG 312
Query: 318 GYNLGSISNSVLACMNVL 335
GY ++ LA + L
Sbjct: 313 GYARWTVPFYGLAVLEEL 330
>gi|386811556|ref|ZP_10098781.1| histone deacetylase [planctomycete KSU-1]
gi|386403826|dbj|GAB61662.1| histone deacetylase [planctomycete KSU-1]
Length = 311
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 180/328 (54%), Gaps = 28/328 (8%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
L+YD KH+T G HPEN R++ L+A G+ + V ++ A + + +HTE
Sbjct: 4 LMYDNIFLKHDTGHG--HPENAKRLENTVKHLKATGLWDQLRVEKSRAASLEEIGLIHTE 61
Query: 77 NHVNLIKNISSK---QFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
N++ IK+I++ Q DS D I S S +AA A G+ + + + +GE
Sbjct: 62 NYIQAIKHIANTGGGQLDS--DTIISA--------ASYDAAVHAVGAPLAAIDFIMKGEE 111
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+AF ++RPPGHHA P MGFCL+NNVAVAA ++ + + + +I I+DWDVHHGN T
Sbjct: 112 KNAFCLIRPPGHHATPARGMGFCLFNNVAVAAKYI---QSKYKLERIFIIDWDVHHGNGT 168
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F+ DP +L+FS+HR+ FYP + G G G G+ INVP Y+
Sbjct: 169 QDAFFNDPTILYFSMHRY---PFYPGS--GRKEESGWDKGEGFTINVPVP-ANIPSQRYI 222
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----G 309
++ ++ A F P+ IIISAGFD DP+GG + + ++ + ++ AQ G
Sbjct: 223 ELFTDVIKQNADQFIPEFIIISAGFDTYKKDPIGGLNLDREDFRILTEIVIRTAQKYCNG 282
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLE 337
++V LEGGYN + + A + LL+
Sbjct: 283 RLVSCLEGGYNFSDLPLCIEAHLKALLQ 310
>gi|422002105|ref|ZP_16349343.1| histone deacetylase [Leptospira santarosai serovar Shermani str. LT
821]
gi|417259037|gb|EKT88416.1| histone deacetylase [Leptospira santarosai serovar Shermani str. LT
821]
Length = 313
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 172/327 (52%), Gaps = 26/327 (7%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G LY + HN H E+ +R+ A NKL K+ + VH
Sbjct: 3 TGFLYSQDFLYHNADPKIPHYESSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEFFNEVH 62
Query: 75 TENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
+ H+ I+ K+ FDS E S +AY AA S I +A+ + G
Sbjct: 63 SNAHLQKIERSKGKRGYFDSDTP----------FTEKSWISAYSAANSGITLADALLSGT 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L G KI I+DWDVHHGN
Sbjct: 113 IKNGFSLLRPPGHHAERNRIMGFCILNNVAITARYLQKN----GFKKIFIIDWDVHHGNG 168
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++DP V + S+H+ FYP G + G+ G+G N+P + + Y
Sbjct: 169 TQEIFYQDPNVFYLSIHQFP---FYPMT--GLSSEAGKDEGIGTTKNIPMQ-ANSENQSY 222
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ---- 308
+ + +++P + FGPDI+++SAGFDA DPLGG +T G+ + K +++ A
Sbjct: 223 IQKFKEVVIPTMEHFGPDIVLLSAGFDAHKEDPLGGMNITTKGFEDLTKIVLESADKICG 282
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVL 335
GK++ LEGGY+L ++S SV + VL
Sbjct: 283 GKVLSFLEGGYDLTALSESVETHVAVL 309
>gi|225180858|ref|ZP_03734306.1| histone deacetylase superfamily [Dethiobacter alkaliphilus AHT 1]
gi|225168339|gb|EEG77142.1| histone deacetylase superfamily [Dethiobacter alkaliphilus AHT 1]
Length = 318
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 178/331 (53%), Gaps = 28/331 (8%)
Query: 41 IKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASK 100
++AI L+ + + L A + VHT H++ + + +Q + D
Sbjct: 1 MQAILTLLKQQNLFDKLEQLAPMPASVDEVAKVHTRQHIDYVHKLC-QQHKPQLD----- 54
Query: 101 LNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNN 160
YL S + L+AG + V G L+ AF+ RPPGHHAEP AMGFCL+NN
Sbjct: 55 -PDTYLTPESYDVGLLSAGGALTAMRAVMRGNLDVAFSFGRPPGHHAEPHRAMGFCLFNN 113
Query: 161 VAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAN 220
+A+AA + + E G+++I+I+DWDVHHGN TQK F+ DP VLF S H+ +P
Sbjct: 114 MAIAAR---HAQEEFGLSRIMILDWDVHHGNGTQKAFYHDPGVLFVSPHQ---SPLFPGT 167
Query: 221 DDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDA 280
G GEG G GYN+N+P G CGD Y V+ I+ P+A F P+++++SAG D+
Sbjct: 168 --GHLKEKGEGAGEGYNVNIPLPPG-CGDEVYSQVFTEIIRPLADRFRPELLMVSAGQDS 224
Query: 281 AAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSISNSVLACMNVL- 335
DP+ ++ G+++M + A+ GK+VL LEGGY+LG ++ +V+ ++ L
Sbjct: 225 YHNDPVASMNLSFAGFAMMARHARQIAEEYCDGKVVLTLEGGYHLGGLAEAVVTILSELS 284
Query: 336 -----LEDKPVAGSSEAYPFESTWRVIQAVR 361
L +P + Y + +R+I V+
Sbjct: 285 GWDRPLNHEPAPPAEPIY--DDPFRIIGEVK 313
>gi|312095873|ref|XP_003148495.1| histone deacetylase [Loa loa]
Length = 465
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 163/297 (54%), Gaps = 20/297 (6%)
Query: 47 KLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYL 106
K Q +G+ RC L ++A ++L VH+ +V I + +++AS + IY
Sbjct: 31 KFQNSGLLNRCTHLKTRKADLEDLCLVHSRTYVERIAATREMNLE-ELEKLASTFDDIYF 89
Query: 107 NEGSSEAAYLAAGSVIEVAERV-AEGEL-NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA 164
N S E A ++ G ++ E V +EGE +S+FA +RPPGHHA ++A GFC++NNVA+
Sbjct: 90 NNYSYEVATISVGVALQAMEAVLSEGERKSSSFAAIRPPGHHASCEKACGFCIFNNVAIC 149
Query: 165 ASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGF 224
A + LG+ K+LIVDWDVH G TQ +P++ S+HR+E G F+P +
Sbjct: 150 A----KKARALGVEKVLIVDWDVHAGQGTQYAIEDEPKIKLISIHRYEHGLFWPYLPESD 205
Query: 225 YTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284
INVP GD++Y+A H ++P+ DF P +I++S GFDA GD
Sbjct: 206 KN----------TINVPLNTVGMGDSEYIAFIQHFVVPIIHDFMPGLILVSCGFDAGFGD 255
Query: 285 PLGGCRVTPYGYSVMLKKLMDFAQG---KIVLALEGGYNLGSISNSVLACMNVLLED 338
P G V+P GY M K ++D A + + LEGGY + S++ V C+ LL D
Sbjct: 256 PEGNMNVSPAGYYWMTKLVLDAATAIGSPLCMVLEGGYFIDSLTYGVQFCIKALLGD 312
>gi|392412457|ref|YP_006449064.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
gi|390625593|gb|AFM26800.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
Length = 345
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 182/325 (56%), Gaps = 23/325 (7%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
+GL+ D R +H G HPE+PNR+++++ +L + + A + L VH
Sbjct: 4 IGLIKDTRYMEHRP--GLVHPESPNRLRSLY-RLVDKEFKDVVTFVEPQSATLEQLELVH 60
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
T ++ I + + K+F + N+ YL AA+LA G ++ E + EG
Sbjct: 61 TPQYIKQIMSTAGKEFTNLAPDTPVSANT-YL------AAWLAVGGCLKALEALMEGRFR 113
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+ F +VRPPGHHA D A GFC++NN+ V A + + G+ +ILIVDWD+HHGN+ Q
Sbjct: 114 ACFCLVRPPGHHALTDRAGGFCIFNNLGVTAKYAIE---TYGLKRILIVDWDIHHGNALQ 170
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F+ + RVL+FS H + +YP D + GE GLGYN+N+P D D +
Sbjct: 171 DLFYGENRVLYFSSH---YRGWYPHTGD--WDEFGESEGLGYNVNLPVPK-EMTDNDIIH 224
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGK---- 310
V+ ++ + + + P++I+I+AGFDA DPLG R++ Y +++ ++ F+
Sbjct: 225 VYRELVGRIVRRWKPELILIAAGFDAHEKDPLGRTRLSENAYGWLMQMILQFSDAAKSAP 284
Query: 311 IVLALEGGYNLGSISNSVLACMNVL 335
I+L+LEGGY+L ++ +SV + VL
Sbjct: 285 ILLSLEGGYDLWALVSSVREVLRVL 309
>gi|196229464|ref|ZP_03128329.1| histone deacetylase superfamily [Chthoniobacter flavus Ellin428]
gi|196226696|gb|EDY21201.1| histone deacetylase superfamily [Chthoniobacter flavus Ellin428]
Length = 313
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 182/328 (55%), Gaps = 21/328 (6%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
GL D R C+ + P G HPE+P R A+ +L+ +G+ ++ + + ++L VH
Sbjct: 2 TGLFADAR-CQEHDP-GRGHPESPARFAAVMERLKQSGLWEKLTPIEPRSVTSEDLELVH 59
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
+++ L + ++ + ++++ S+ E S +AA LAAG + + V EG++
Sbjct: 60 ERDYLRL----AEREIRAGASQLSTGDTSVC--EASWDAARLAAGGAMAAVDAVMEGKVA 113
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
+AF RPPGHHA D MGFC+ NN+A+AA + + GI ++LIVDWDVHHGN TQ
Sbjct: 114 NAFCAGRPPGHHASTDRGMGFCVLNNIAIAAR---HAQRRHGIERVLIVDWDVHHGNGTQ 170
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F++D V FFS H+ +YP T GEG G N +P G G +
Sbjct: 171 DIFYEDGSVFFFSTHQ---SPWYPGTGHARETGAGEGRGTTLNCPLP---GGSGHREIFV 224
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF----AQGK 310
++ LLP + F P +++SAGFD+ GDPLG +T ++ + K + A+G+
Sbjct: 225 AFNEQLLPAMEKFQPQFVLVSAGFDSRGGDPLGDFLLTDGDFADLTKIVRGIADKHAKGR 284
Query: 311 IVLALEGGYNLGSISNSVLACMNVLLED 338
+V LEGGY+L ++N+V+A + L+ +
Sbjct: 285 VVSLLEGGYSLNGLANAVVAHVRELMTE 312
>gi|148672274|gb|EDL04221.1| histone deacetylase 7A, isoform CRA_c [Mus musculus]
Length = 884
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 192/381 (50%), Gaps = 80/381 (20%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ +C L ++A + L S
Sbjct: 501 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQS 560
Query: 73 VHTENHVNL--IKNISSKQFDSRR---------------DRIASKLNSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + + ++I+ SS AA
Sbjct: 561 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAAR 620
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL
Sbjct: 621 WAAGSVTDLAFKVASRELK----------------------------------------- 639
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
DVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 640 ----------DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEG 687
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 688 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 747
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM+ A G +VLALEGG++L +I ++ AC+ LL +K S E++
Sbjct: 748 VSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQ 807
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P S R ++AV + +W
Sbjct: 808 KPNLSAIRSLEAVVRVHRKYW 828
>gi|399155693|ref|ZP_10755760.1| histone deacetylase superfamily protein [SAR324 cluster bacterium
SCGC AAA001-C10]
Length = 315
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 175/310 (56%), Gaps = 17/310 (5%)
Query: 30 DGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQ 89
D HPEN NR++AI KL++ G+ +R ++ + + A + + +H+E K IS+ +
Sbjct: 15 DTGSHPENANRLRAIQEKLESEGLLERLILQSGRSATSQEIKLLHSE------KLISAVE 68
Query: 90 FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEP 149
+ ++ + AA A GSV++ VAE L++AF VRPPGHHAE
Sbjct: 69 AAAESGARTLHTPDCIISAQTFNAAAHAVGSVLDGVIEVAERRLDNAFCSVRPPGHHAEN 128
Query: 150 DEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVH 209
D AMGFC +NN+A+AA FL E+G ++LI D+DVHHGN TQ F + + F S+H
Sbjct: 129 DSAMGFCFFNNIALAAEFLTR---EMGFKRVLIFDFDVHHGNGTQHFFEERADIFFASIH 185
Query: 210 RHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGP 269
+ + T +P GF G G G G+ +NVP G GD +YL ++ + P +++ P
Sbjct: 186 Q-DPRTSFPGT--GFAHERGSGGGAGFTLNVPVPPG-MGDEEYLQIFYDQVQPKLEEYKP 241
Query: 270 DIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSIS 325
D +++SAGFDA DPL +T + + ++L A+ G+I+ LEGGY+L ++S
Sbjct: 242 DFVLVSAGFDAHRDDPLASLNLTERTFRELTRELKQLAEQYAGGRIMSLLEGGYDLNALS 301
Query: 326 NSVLACMNVL 335
+ V + +L
Sbjct: 302 SCVQEHLLIL 311
>gi|288931038|ref|YP_003435098.1| histone deacetylase [Ferroglobus placidus DSM 10642]
gi|288893286|gb|ADC64823.1| Histone deacetylase [Ferroglobus placidus DSM 10642]
Length = 359
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 201/381 (52%), Gaps = 53/381 (13%)
Query: 14 RVGLLYDERMCKH-NTPDGDYHPENPNRIKAIWNKLQAAGI--PQRCVVLNAKEAKDKNL 70
+ G+++ ++ +H TP HPE R+ ++L GI +R V++N + AK++++
Sbjct: 2 KTGIVFHKKYLEHEQTPT---HPERRERLAYTIDQLTEEGIFEDERIVLINPEPAKEEDV 58
Query: 71 LSVHTENHVNLIKNISSK----QFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAE 126
L VHT ++ +K S FD+ + G E A LAAG I+ A+
Sbjct: 59 LRVHTREYIEFLKAASKTGGFIDFDTN------------VPVGLFEVAMLAAGGAIKAAK 106
Query: 127 RVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
V EG++ +AFA+VRPPGHHA+P GFC NNVAV +L G +ILI+DWD
Sbjct: 107 YVVEGKVRNAFAMVRPPGHHAKPYTGAGFCYINNVAVMVEWLKRR----GFKRILILDWD 162
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGR 246
HHG+ TQ++F++D VLF S H+ YP G+ +G+G G GY IN+P G
Sbjct: 163 AHHGDGTQEIFYEDDSVLFISTHQM---PLYPGT--GYPHEVGKGRGEGYTINIPLPPG- 216
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
D YL V++ ++ PVA++F P+ I ISAG D DPL G +T GY+ M+K+ +D
Sbjct: 217 TSDESYLYVFEKVIEPVAEEFKPEFIAISAGQDNHFTDPLTGLALTARGYAEMMKRAVDL 276
Query: 307 AQ----GKIVLALEGGY---------NLGSISNSVLACMNVLLEDKPVAGSSEA------ 347
A+ G++V LEGGY NLG I + LA M++ +P SE
Sbjct: 277 AEKLCKGRLVAVLEGGYSVESALPYTNLGII--AALAGMDISNIREPAKILSELRWRKRD 334
Query: 348 YPFESTWRVIQAVRKKLSAFW 368
Y + + VR S +W
Sbjct: 335 YASQKVRDTVAEVRSIHSKYW 355
>gi|421107226|ref|ZP_15567781.1| histone deacetylase family protein [Leptospira kirschneri str. H2]
gi|410007745|gb|EKO61431.1| histone deacetylase family protein [Leptospira kirschneri str. H2]
Length = 264
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 164/279 (58%), Gaps = 26/279 (9%)
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
K+ ++ L +H++NH+ I+N K+ FDS E S +AY AA S
Sbjct: 2 KKFPNEFLNEIHSKNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANS 51
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
I ++E + G + + F+++RPPGHHAE + MGFC+ NNVA+ A +L N G KI
Sbjct: 52 GIILSESLISGTIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNN----GYKKI 107
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
I+DWDVHHGN TQ++F++DP + + S+H+ FYP G T G+G G+G N+
Sbjct: 108 FIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFP---FYPMT--GLVTETGKGKGIGTTKNI 162
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
P + G+ Y+ + I++P + F PDI++ISAGFDA DPLGG +T G+ +
Sbjct: 163 PMQ-ANSGNQAYMQKFKEIVVPTMERFDPDIVLISAGFDAHKDDPLGGMNITTKGFEDLT 221
Query: 301 KKLMDFAQ----GKIVLALEGGYNLGSISNSVLACMNVL 335
+ +++ A GK++ LEGGY+L ++S SV A + VL
Sbjct: 222 RIILESADRICGGKVLSFLEGGYDLTALSESVEAHIAVL 260
>gi|402589565|gb|EJW83497.1| histone deacetylase [Wuchereria bancrofti]
Length = 462
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 173/332 (52%), Gaps = 42/332 (12%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLL 71
+R+V + D M +H + DYH E+P R+ A+ KL+++G+ RC L K+A ++L
Sbjct: 3 QRQVYIGTDRAMLQHRC-EWDYHLEHPGRLSAVLEKLESSGLLNRCTHLRPKKANLEDLC 61
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERV-AE 130
VH+ +V I + ++IAS + +Y N S EAA ++ G ++ E V ++
Sbjct: 62 LVHSRMYVERIAQTRKMNLE-ELEKIASTFDDVYFNNYSYEAAAISVGVSLQAMEAVLSD 120
Query: 131 GEL-NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
GE +S+FA++RPPGHHA + A GFC++NN LG+ K+LIVDWDVH
Sbjct: 121 GERKSSSFAVIRPPGHHASRERACGFCIFNNART-----------LGVEKVLIVDWDVHA 169
Query: 190 GNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGD 249
G TQ DP++ S+H INVP GD
Sbjct: 170 GQGTQYAVEDDPKIKLISIHHKN------------------------TINVPLNEVGIGD 205
Query: 250 ADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ- 308
++Y+A H ++P+ DF P +++IS+GFDA GD G V+P GY M K ++D A
Sbjct: 206 SEYIAFVQHFVVPIIYDFVPSLVLISSGFDAGFGDEEGNMNVSPAGYYWMTKLILDAATT 265
Query: 309 --GKIVLALEGGYNLGSISNSVLACMNVLLED 338
+ + +EGGY + S++ V C+ LL D
Sbjct: 266 VGSPLCMLMEGGYFIDSLAYGVQFCIKALLND 297
>gi|354502076|ref|XP_003513113.1| PREDICTED: histone deacetylase 7-like isoform 4 [Cricetulus
griseus]
Length = 871
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 193/381 (50%), Gaps = 80/381 (20%)
Query: 15 VGLLYDERMCKHNTPDGD--YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
GL+YD M KH GD HPE+ RI++IW++LQ G+ RC L ++A + L S
Sbjct: 488 TGLVYDSVMLKHQCSCGDNSKHPEHAGRIQSIWSRLQERGLRSRCECLRGRKASLEELQS 547
Query: 73 VHTENHVNL--IKNISSKQFDSRR--DRIASKL-------------NSIYLNEGSSEAAY 115
VH+E HV L +S + D+ + +A ++ ++I+ SS AA
Sbjct: 548 VHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAAR 607
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
AAGSV ++A +VA EL
Sbjct: 608 WAAGSVTDLAFKVASRELK----------------------------------------- 626
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
DVHHGN TQ+ F++DP VL+ S+HRH+ G F+P + G +G G G G
Sbjct: 627 ----------DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGNGEG 674
Query: 236 YNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCR 290
+N+NV W G GD +YLA + +++P+A++F PD++++SAGFDAA G PLGG
Sbjct: 675 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYH 734
Query: 291 VTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAY-- 348
V+ + M ++LM A G +VLALEGG++L +I ++ AC+ LL +K S E +
Sbjct: 735 VSAKCFGYMTQQLMTLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDLLSEEGWKQ 794
Query: 349 -PFESTWRVIQAVRKKLSAFW 368
P + R ++AV + +W
Sbjct: 795 KPNPNAIRSLEAVIRVHRKYW 815
>gi|448746849|ref|ZP_21728514.1| Histone deacetylase superfamily [Halomonas titanicae BH1]
gi|445565777|gb|ELY21886.1| Histone deacetylase superfamily [Halomonas titanicae BH1]
Length = 362
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 171/306 (55%), Gaps = 22/306 (7%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
+PE+P R+KAI + L+ A I + K A + L VHT ++++ I F R
Sbjct: 45 YPEHPGRLKAIQHLLEKAPI-AGLHIEGGKVATHEQLARVHTTSYLSDI-------FSLR 96
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
+++ ++ GS +AA +AAG+ I E V E SAFA+VRPPGHHAEP A
Sbjct: 97 GKNAWLDVDTTAVSPGSVDAAEVAAGTAIAAVEAVMEKRAKSAFALVRPPGHHAEPVRAR 156
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL+NNVAVAA+ + R LG ++LIVDWD HHGN TQ +FW +P V+FF +HR
Sbjct: 157 GFCLFNNVAVAAA---HARSALGCERVLIVDWDAHHGNGTQDIFWAEPDVMFFDIHRA-- 211
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
FYP + G +G G G INVP G GD YL + IL P A F PDII+
Sbjct: 212 APFYPGS--GHLEEVGAGLAEGTTINVPLPAG-AGDEAYLKAFRDILAPAAAWFKPDIIL 268
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSISNSVL 329
+SAGFD D V+ G+ + L A+ G++V LEGGYNL S+SN
Sbjct: 269 VSAGFDPHWHDL--ALNVSYEGFGALTGFLQQLAEQHCDGRLVFVLEGGYNLESLSNGTR 326
Query: 330 ACMNVL 335
A + VL
Sbjct: 327 AVLAVL 332
>gi|418697320|ref|ZP_13258313.1| histone deacetylase family protein [Leptospira kirschneri str. H1]
gi|409954822|gb|EKO13770.1| histone deacetylase family protein [Leptospira kirschneri str. H1]
Length = 278
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 164/279 (58%), Gaps = 26/279 (9%)
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
K+ ++ L +H++NH+ I+N K+ FDS E S +AY AA S
Sbjct: 16 KKFPNEFLNEIHSKNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANS 65
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
I ++E + G + + F+++RPPGHHAE + MGFC+ NNVA+ A +L N G KI
Sbjct: 66 GIILSESLISGTIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNN----GYKKI 121
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
I+DWDVHHGN TQ++F++DP + + S+H+ FYP G T G+G G+G N+
Sbjct: 122 FIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFP---FYPMT--GLVTETGKGKGIGTTKNI 176
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
P + G+ Y+ + I++P + F PDI++ISAGFDA DPLGG +T G+ +
Sbjct: 177 PMQ-ANSGNQAYMQKFKEIVVPTMERFDPDIVLISAGFDAHKDDPLGGMNITTKGFEDLT 235
Query: 301 KKLMDFAQ----GKIVLALEGGYNLGSISNSVLACMNVL 335
+ +++ A GK++ LEGGY+L ++S SV A + VL
Sbjct: 236 RIILESADRICGGKVLSFLEGGYDLTALSESVEAHIAVL 274
>gi|149175826|ref|ZP_01854444.1| acetoin utilization protein [Planctomyces maris DSM 8797]
gi|148845273|gb|EDL59618.1| acetoin utilization protein [Planctomyces maris DSM 8797]
Length = 310
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 170/309 (55%), Gaps = 20/309 (6%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
HPE+ R++ + N++ A IP ++ + + LL VH E ++N ++ S+ +
Sbjct: 18 HPESSLRLETVMNQVSTAAIPNLMILKDPTVGAGEELLRVHPETYLNQLQAFSA----AG 73
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
RI S ++ S E A AAG +E +RV G++ F+ RPPGHHA D AM
Sbjct: 74 GGRIESD---TVMSADSYEVARYAAGCAVEAVDRVIMGQVKQVFSASRPPGHHALSDRAM 130
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL NNVA+AA ++ G+N++LIVDWDVHHGN TQ +F+++ V FFS HRH
Sbjct: 131 GFCLLNNVAIAARHAIDFH---GLNRVLIVDWDVHHGNGTQDIFYEEESVYFFSAHRH-- 185
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
FYP G T G G GLG N+P G DY + ++ +L+ A P++I+
Sbjct: 186 -PFYPGTGLGHET--GSGAGLGTIWNLPLAFG-ISRQDYFSQFERMLVDAAARCQPELIL 241
Query: 274 ISAGFDAAAGDPLG--GCRVTPYGYSVMLKKLM--DFAQGKIVLALEGGYNLGSISNSVL 329
ISAGFDA DP+G G +G L K + ++ G+IV LEGGY+ ++ SV+
Sbjct: 242 ISAGFDAHKDDPIGSLGLETEDFGRLTQLVKEVAREYCGGRIVSLLEGGYHPQRLAESVI 301
Query: 330 ACMNVLLED 338
+ L D
Sbjct: 302 CHLTHLAND 310
>gi|410941647|ref|ZP_11373441.1| histone deacetylase family protein [Leptospira noguchii str.
2006001870]
gi|410783196|gb|EKR72193.1| histone deacetylase family protein [Leptospira noguchii str.
2006001870]
Length = 313
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 176/327 (53%), Gaps = 26/327 (7%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
G +Y + HN H EN +R+ A N+L + K+ + L +H
Sbjct: 3 TGFIYSQDFLYHNADFEIPHYENSDRLLACLNRLLQSSYFNSLFFPEMKKFPHEFLNEIH 62
Query: 75 TENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
++N + I+N K+ FDS E S +AY AA S I +++ + G
Sbjct: 63 SKNQIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANSGITLSKSLISGT 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + F+++RPPGHHA + MGFC+ NNVA+ A +L N G KI I+DWDVHHGN
Sbjct: 113 IKNGFSLLRPPGHHAGHNRIMGFCMLNNVAITARYLQNN----GFKKIFIIDWDVHHGNG 168
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F++DP + + S+H+ FYP G T G+G G+G N+P + A Y
Sbjct: 169 TQEIFYEDPNIFYLSIHQFP---FYPMT--GLVTETGKGKGIGTTKNIPMQVNSENQA-Y 222
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
+ + I++P + F P++++ISAGFDA DPLGG +T G+ + + +++ A
Sbjct: 223 IQKFKEIVVPTMERFEPNVVLISAGFDAHKEDPLGGMNITTKGFEDLTRIILESADRICN 282
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVL 335
GK++ LEGGY+L ++S SV + VL
Sbjct: 283 GKVLSFLEGGYDLTALSESVEVHVAVL 309
>gi|339000109|ref|ZP_08638731.1| histone deacetylase superfamily protein [Halomonas sp. TD01]
gi|338762984|gb|EGP17994.1| histone deacetylase superfamily protein [Halomonas sp. TD01]
Length = 362
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 170/306 (55%), Gaps = 22/306 (7%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
+PE+P R++AI L+ A I + K A L VHT ++++ I F R
Sbjct: 45 YPEHPGRLQAIQQLLEKAPI-DGLQIEGGKAATHDQLARVHTTSYLSDI-------FSLR 96
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
+++ ++ GS +AA +AAG+ I E V + SAFA++RPPGHHAEP A
Sbjct: 97 GKNAWLDVDTTAVSPGSIDAAEVAAGTAIAAVEAVMDKRTQSAFALIRPPGHHAEPVRAR 156
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL+NNVAVAA+ + R LG ++LI+DWD HHGN TQ +FW DP V+FF +HR
Sbjct: 157 GFCLFNNVAVAAA---HARSALGCERVLIIDWDAHHGNGTQDIFWADPDVMFFDIHRA-- 211
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
FYP + G +G G G G INVP G GD YL + IL P A F PDII+
Sbjct: 212 APFYPGS--GHLEEVGAGLGEGTTINVPLPAG-AGDEAYLKAFRDILAPAAHWFKPDIIL 268
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGSISNSVL 329
+SAGFD D V+ G+ + L A +G++V LEGGYNL S++N
Sbjct: 269 VSAGFDPHWHDL--ALNVSYEGFGALTGFLQQLAEQHCEGRLVFVLEGGYNLESLANGTR 326
Query: 330 ACMNVL 335
A + VL
Sbjct: 327 AVLAVL 332
>gi|256069095|ref|XP_002571029.1| histone deacetylase 4 5 [Schistosoma mansoni]
Length = 291
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 142/214 (66%), Gaps = 11/214 (5%)
Query: 110 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVA---AS 166
++ AA LAAG V+++A RV G+ + FA+VRPPGHHAEP +AMGFC +N+VA+A A
Sbjct: 75 TAHAARLAAGCVVDLACRVMLGQCPNGFALVRPPGHHAEPGQAMGFCYFNSVAIAAKRAQ 134
Query: 167 FLLNERPELGIN-KILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFY 225
FL + E + +ILIVDWD+HHGN TQ +F+ DP VL+ S+HRH+ G F+P G
Sbjct: 135 FLGSTTLESALKPRILIVDWDIHHGNGTQTVFYTDPTVLYISLHRHDEGGFFPGT--GSP 192
Query: 226 TMIGEGPGLGYNINVPWENGRC-GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284
IG GPG GY IN+ W +G DA+YLA + I+LPVA +F P I++ISAGFDAA G
Sbjct: 193 EEIGSGPGEGYTINIAWPSGIVMSDAEYLAAFRLIILPVACEFQPSIVLISAGFDAAPGH 252
Query: 285 P--LGGCRVTP--YGYSVMLKKLMDFAQGKIVLA 314
LGG V+P +G+ L + A K+VL+
Sbjct: 253 SANLGGYSVSPAAFGWMTRLLSIDRIANSKVVLS 286
>gi|418720583|ref|ZP_13279780.1| histone deacetylase family protein [Leptospira borgpetersenii str.
UI 09149]
gi|421094501|ref|ZP_15555217.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200801926]
gi|410362563|gb|EKP13600.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200801926]
gi|410742989|gb|EKQ91733.1| histone deacetylase family protein [Leptospira borgpetersenii str.
UI 09149]
gi|456891461|gb|EMG02172.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200701203]
Length = 313
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 172/328 (52%), Gaps = 26/328 (7%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ G +Y + HN H E+ +R+ A NKL K+ + +
Sbjct: 2 KTGFIYSKDFLYHNADPKIPHYESSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEFFNEI 61
Query: 74 HTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H+ H+ I+ K+ FDS E S AAY AA S I +A+ + G
Sbjct: 62 HSSAHLQKIERSKGKRGYFDSDTP----------FTEKSWIAAYSAANSGITLADALISG 111
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L G KI I+DWDVHHGN
Sbjct: 112 TIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQKN----GFKKIFIIDWDVHHGN 167
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ++F++DP V + S+H+ FYP G + G+ G+G N+P + A
Sbjct: 168 GTQEIFYQDPNVFYLSIHQF---PFYPMT--GLSSETGKNEGIGTTKNIPMQANSDNQA- 221
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA---- 307
Y+ + +++P + F PDI++ISAGFDA DPLG +T G+ + K +++ A
Sbjct: 222 YIQKFKEVVIPTMEHFEPDIVLISAGFDAHKEDPLGEMDITTKGFEDLTKIVLESADKIC 281
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVL 335
+GK++ LEGGYNL ++S SV A + V
Sbjct: 282 EGKVLSFLEGGYNLTALSESVEAHVAVF 309
>gi|116328827|ref|YP_798547.1| histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331736|ref|YP_801454.1| histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|116121571|gb|ABJ79614.1| Histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116125425|gb|ABJ76696.1| Histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
Length = 317
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 169/323 (52%), Gaps = 26/323 (8%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+ G +Y + HN H EN +R+ A NKL K+ + +
Sbjct: 2 KTGFIYSKDFLYHNADPKIPHYENSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEFFNEI 61
Query: 74 HTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
H+ H+ I+ K+ FDS E S AAY AA S I +A+ + G
Sbjct: 62 HSSAHLQKIERSKGKRGYFDSDTP----------FTEKSWIAAYSAANSGITLADALISG 111
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+ + F+++RPPGHHAE + MGFC+ NNVA+ A +L G KI I+DWDVHHGN
Sbjct: 112 TIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQKN----GFKKIFIIDWDVHHGN 167
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ++F++DP V + S+H+ FYP G + G+ G G N+P + A
Sbjct: 168 GTQEIFYQDPNVFYLSIHQF---PFYPMT--GLSSETGKNEGSGTTKNIPMQANSDNQA- 221
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA---- 307
Y+ + +++P + F PDI++ISAGFDA DPLG +T G+ + K +++ A
Sbjct: 222 YIQKFKEVVIPTMEHFEPDIVLISAGFDAHKEDPLGEMDITTKGFEDLTKIVLESADKIC 281
Query: 308 QGKIVLALEGGYNLGSISNSVLA 330
+GK++ LEGGYNL ++S SV A
Sbjct: 282 EGKVLSFLEGGYNLTALSESVEA 304
>gi|44889400|gb|AAS48345.1| histone deacetylase 10 [Homo sapiens]
Length = 396
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 181/362 (50%), Gaps = 56/362 (15%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRETQVLGKEELQA-LSGQFDTIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH + A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGRG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A
Sbjct: 239 VAAFLHLLLPLA------------------------------------------------ 250
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
EGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 251 --FEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQ 308
Query: 373 DE 374
+
Sbjct: 309 QQ 310
>gi|381211229|ref|ZP_09918300.1| histone deacetylase superfamily protein [Lentibacillus sp. Grbi]
Length = 368
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 192/381 (50%), Gaps = 45/381 (11%)
Query: 14 RVGLLYDERMCKHNTPDG------------DYHPENPNRIKAIWNKLQAAGIPQRCVVLN 61
+ G + DE H T +G D H ENP + + N L+ + ++
Sbjct: 4 KTGFICDESYFWHQTGNGALNIQSGGWVQADTHAENPESKRRVKNLLERSRFMDELQQIS 63
Query: 62 AKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSV 121
+EA + +L H++ ++N IK +S + +++I + S E A +AG V
Sbjct: 64 PREATRQEILINHSKEYINKIKELSDAGGGD------AGVHAI-VGPDSYEIALKSAGGV 116
Query: 122 IEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKIL 181
+ + V E E+ +A+A+VRPPGHHAEP E MGFCL+NNVA+AA + R + G+ +I
Sbjct: 117 MTSVDAVMEEEVQNAYALVRPPGHHAEPAEGMGFCLFNNVAIAAKYA---REKYGLKRIA 173
Query: 182 IVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVP 241
I+DWDVHHGN T+ F D VLF SVH+ +P D G T G+G G GY +N+
Sbjct: 174 ILDWDVHHGNGTETAFENDSDVLFISVHQE---NIFP-KDRGAITYTGKGDGEGYTVNIE 229
Query: 242 WENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLK 301
G GD Y +D ++ PV + P++I ISAG DA+ DP+G VT GY M K
Sbjct: 230 LPAG-TGDEGYFYAFDQLIAPVFDQYAPELIFISAGQDASRFDPIGRMSVTAEGYFQMSK 288
Query: 302 KLMDFAQ----GKIVLALEGGYNLGSISNSVLACMNVL------LEDKPVAGSSEA--YP 349
++ A+ +I+ EGGY+ + L + L ++D G E YP
Sbjct: 289 RIKKLAEKHSSNRIIACHEGGYSTAYVPFCTLRVIEALKGKRSQVDDPFDQGFHEGPIYP 348
Query: 350 F--ESTWRVIQAVRKKLSAFW 368
E+ R I+ R A+W
Sbjct: 349 HQKEAVQRAIEVQR----AYW 365
>gi|254282793|ref|ZP_04957761.1| histone deacetylase superfamily protein [gamma proteobacterium
NOR51-B]
gi|219678996|gb|EED35345.1| histone deacetylase superfamily protein [gamma proteobacterium
NOR51-B]
Length = 371
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 174/339 (51%), Gaps = 31/339 (9%)
Query: 13 RRVGLLYDERMCKHNT-------PDG-----DYHPENPNRIKAIWNKLQAAGIPQRCVVL 60
R+ G + E HNT P G D H ENP + N ++ +G+ Q L
Sbjct: 5 RKTGFVCHELYMWHNTGNYAGPLPYGNPIQPDTHAENPETKRRFRNLMEVSGMDQHMTAL 64
Query: 61 NAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
+ A+D+ +L HT H+ +K +S+ A L + GS E A L+AG
Sbjct: 65 RPRMARDEEILRFHTPEHLERVKTVSASGGGD-----AGILTP--MGAGSFEIAMLSAGG 117
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
+ E V G++++A+A+VRPPGHHA D MGFCL+ N A+A L + G+ +I
Sbjct: 118 CLVALEAVLSGDVDNAYALVRPPGHHAVADAGMGFCLFGNAAIAGFSALEDH---GLQRI 174
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
VDWDVHHGN TQ F+ DPR L S+H+ F P D G GE G GYN+N+
Sbjct: 175 AFVDWDVHHGNGTQSAFYDDPRALTISIHQDN--CFPP--DSGHVHERGESAGEGYNVNI 230
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY---- 296
P G G Y A ++ +++P + P++II+ +GFDA A DPLG ++T Y
Sbjct: 231 PLPPG-SGVGAYEAAFEQVVIPALDAYQPEVIIVPSGFDAGAYDPLGRMQMTSDSYRNLT 289
Query: 297 SVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
S++L G++++ EGGYN ++ LA M L
Sbjct: 290 SLLLAAADRHCGGRLLMTHEGGYNSWTVPFFGLAVMETL 328
>gi|119593926|gb|EAW73520.1| histone deacetylase 10, isoform CRA_j [Homo sapiens]
Length = 396
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 181/362 (50%), Gaps = 56/362 (15%)
Query: 15 VGLLYDERMCKHNT--PDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
L+Y E M D + E P R+ A ++L+ G+ QRC+ L+A+EA ++ L
Sbjct: 3 TALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGL 62
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VH+ +V+L++ + + ++ + ++IY + + A LAAG+ +++ + V G
Sbjct: 63 VHSPEYVSLVRETQVLGKEELQ-ALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGA 121
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ + A+VRPPGHH + A GFC++NNVA+AA+ + + + G+++IL+VDWDVHHG
Sbjct: 122 VQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAA---HAKQKHGLHRILVVDWDVHHGQG 178
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
Q +F DP VL+FS HR+E G F+P + +G G GLG+ +N+PW G+ADY
Sbjct: 179 IQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADY 238
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIV 312
+A + H+LLP+A
Sbjct: 239 VAAFLHLLLPLA------------------------------------------------ 250
Query: 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLA 372
EGGY+L S++ SV + LL D S P +S IQ+ R + W +L
Sbjct: 251 --FEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQ 308
Query: 373 DE 374
+
Sbjct: 309 QQ 310
>gi|206889909|ref|YP_002248504.1| acetoin utilization protein [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741847|gb|ACI20904.1| acetoin utilization protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 304
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 173/324 (53%), Gaps = 26/324 (8%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
V +YD+ KH TP+G HPE+ R+ AI N L+ I ++ + + ++A +K L VH
Sbjct: 4 VAFIYDDIFLKHETPEG--HPESKERLIAIVNHLKNKEIWRKLLHIKPRKATEKELALVH 61
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELN 134
++++ IKN + + YL+E S E A A G+V++ + V + +
Sbjct: 62 EPHYIDKIKNSPAGYIEP----------DTYLSEHSYEVACYAVGAVLQAVDGVLNKDFD 111
Query: 135 SAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQ 194
F VRPPGHHAE D AMGFC++NN+AV A++ + G KI IVD DVHHGN TQ
Sbjct: 112 GVFCAVRPPGHHAEIDSAMGFCIFNNIAVGAAYAKTK----GFKKIFIVDIDVHHGNGTQ 167
Query: 195 KMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLA 254
+F D V +FS H+ FYP G +G G G G NVP +G G +YL
Sbjct: 168 HIFEDDCSVFYFSSHQF---PFYPGT--GRELEMGRGAGEGCTYNVPLRSGS-GTKEYLT 221
Query: 255 VWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314
V+ I+ ++ P++I++SAG+D DP+ VT G +++ ++ + +
Sbjct: 222 VFQDIMPQKIREVKPELILVSAGYDMHKDDPMSYINVTTEGVRSIIRSILKSSYAPKIFV 281
Query: 315 LEGGYNLGSISNSVLACMNVLLED 338
LEGGYN + + C+ V LE+
Sbjct: 282 LEGGYN----AQVLAECVGVTLEE 301
>gi|167644523|ref|YP_001682186.1| histone deacetylase superfamily protein [Caulobacter sp. K31]
gi|167346953|gb|ABZ69688.1| histone deacetylase superfamily [Caulobacter sp. K31]
Length = 379
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 168/308 (54%), Gaps = 18/308 (5%)
Query: 32 DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFD 91
D H +P ++ N + +G+ ++ V + A+ A + VHT +H+N IK +S
Sbjct: 34 DRHVYDPEVVRRFRNLVDVSGLLKKLVDIPARLATGLEIGRVHTSDHINQIKIMSGFPTG 93
Query: 92 SRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDE 151
A + G+ E A LAAG I + V GE+++A+A++RP GHH+ PD
Sbjct: 94 GEPGDDAP------VPYGAFEIASLAAGGAIAAVDAVMSGEVDNAYALLRPAGHHSRPDR 147
Query: 152 AMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH 211
+MGFC+++N A+A LL+ + +I VDWDVHHGN TQ + +PR L S+H+
Sbjct: 148 SMGFCIFSNAAIAGRHLLDFH---NVKRIAYVDWDVHHGNGTQAALYNEPRALTISIHQD 204
Query: 212 EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
YP DDGF IGEG G N+N+P G CG Y A +D +++P + F P+I
Sbjct: 205 R---LYPV-DDGFVDQIGEGAAEGTNLNIPLPPG-CGAEAYCAAYDRVVIPALQAFRPEI 259
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM----DFAQGKIVLALEGGYNLGSISNS 327
II+ +GFDA A DP+G + GY + +KLM + G++V EGGY+ ++
Sbjct: 260 IIVPSGFDAGAMDPMGRMMMHSDGYRQLTRKLMATADELCGGRLVFLHEGGYSRWTVPYF 319
Query: 328 VLACMNVL 335
LA + L
Sbjct: 320 GLAVLEEL 327
>gi|298529624|ref|ZP_07017027.1| Histone deacetylase [Desulfonatronospira thiodismutans ASO3-1]
gi|298511060|gb|EFI34963.1| Histone deacetylase [Desulfonatronospira thiodismutans ASO3-1]
Length = 315
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 185/330 (56%), Gaps = 31/330 (9%)
Query: 17 LLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTE 76
++YD+ +CK + G HPENP R+ AI + LQ V + + A++++L H
Sbjct: 6 IMYDQ-ICKTHLA-GSGHPENPARLDAIVSALQNEDQNSELVWQSPEPAREEDLFGNHEA 63
Query: 77 NHVNLIKNISSKQFDSRRDRIASKLNSIY-----LNEGSSEAAYLAAGSVIEVAERVAEG 131
+V+L+ RD +A+ +S+ ++ GS +AA AAG +I + V EG
Sbjct: 64 GYVDLV-----------RDSVAAGRHSLGYPDTGISNGSWDAALTAAGGLINAVDLVMEG 112
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
+ +AF VRPPGHHA P MGFCL+NNVA+AA + + G+++IL++DWDVHHGN
Sbjct: 113 KAANAFCPVRPPGHHARPGMGMGFCLFNNVALAARHAMK---KYGLDRILVIDWDVHHGN 169
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ+ F+++ V FFS H+ ++P + T G G G G N+N P+ G G +
Sbjct: 170 GTQEAFYQEQEVFFFSTHQE---AWFPFTGERHET--GSGKGRGTNMNFPFSAG-AGRDE 223
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF----A 307
L + L+P ++ P ++++SAGFDA GD LG +T ++ + + M+ A
Sbjct: 224 ILPAFTGHLVPTMDEYKPQLVLVSAGFDAMQGDLLGRFNLTEDDFARLTEIAMEIAGKHA 283
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLLE 337
G++V LEGGYNL ++ + A + L++
Sbjct: 284 SGRLVSTLEGGYNLDGLARACAAHVKTLMQ 313
>gi|17537347|ref|NP_496910.1| Protein HDA-10 [Caenorhabditis elegans]
gi|5824816|emb|CAA21669.2| Protein HDA-10 [Caenorhabditis elegans]
Length = 517
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 182/330 (55%), Gaps = 19/330 (5%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI--PQRCVVLNAKEAKDKN 69
+++V +++D + +H+ P YH E P R+ AI +L + R + +EA++
Sbjct: 4 EKKVFVIFDHQEQRHDQPWPSYHIEVPRRLDAILERLNTTKLLTDPRIEHIPRREAEESE 63
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+L+VHT+ +V+ +K+ + + +++ +K IY+N + A LAAG+ I++ V
Sbjct: 64 ILAVHTKRYVDDVKSTETMTVE-QQESFCTKYEDIYVNSATWHRAKLAAGASIDLMTSVM 122
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHH 189
+ A +RPPGHHA PDE GFC++NNVA+AA + K+LIVD+DVH
Sbjct: 123 AAK-RPGIAFIRPPGHHAMPDEGCGFCIFNNVAIAAKAAIQNG-----QKVLIVDYDVHA 176
Query: 190 GNSTQKMFWK--DPRVLFFSVHRHEFGTFYP-ANDDGFYTMIGEGPGLGYNINVPWENGR 246
GN TQ+ + + V S+HR+E G F+P G Y IN+P
Sbjct: 177 GNGTQECVEQMGEGNVQLISIHRYENGHFWPNMPQTGIYH------NYKNTINLPLNTIG 230
Query: 247 CGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF 306
DADY A++ HI+LP F PD++++S+GFDA+ GDP G +VTP G++ M++ L+D
Sbjct: 231 LTDADYHALFTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATMIRMLIDT 290
Query: 307 AQGKIVLALEGGYNLGSISNSVLACMNVLL 336
+ LEGGY L +++ + LL
Sbjct: 291 GI-PVAALLEGGYFLDALAADSEWVLRALL 319
>gi|302870568|ref|YP_003839205.1| histone deacetylase superfamily protein [Micromonospora aurantiaca
ATCC 27029]
gi|302573427|gb|ADL49629.1| histone deacetylase superfamily [Micromonospora aurantiaca ATCC
27029]
Length = 376
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 168/306 (54%), Gaps = 17/306 (5%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
H ENP + + + A+G+ + + + A LL VHTE HV IK Q D R
Sbjct: 36 HIENPEAKRRVHELIHASGLLGELMSIEPRRATVAELLRVHTEAHVQHIK----AQSDLR 91
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
A S + GS + A LAAG +IE+ G++ + +A++RPPGHHA + M
Sbjct: 92 AGGDAGDGFSP-VGHGSYDIARLAAGGLIELVTAAVHGDITNGYALLRPPGHHATAEAGM 150
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL+N++AVAA + + ELG+ +I +VD+D HHGN TQ +F+ DP VL S+ H+
Sbjct: 151 GFCLFNSIAVAAR---HAQAELGLARIAVVDFDAHHGNGTQSIFYDDPSVLTISL--HQA 205
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
G F P D G+ G G G GY +NVP G G A YL+ ++LPV F PD+I+
Sbjct: 206 GCFPP--DSGWTHENGTGYGTGYALNVPLPPG-SGHAAYLSAMHQVVLPVLDRFAPDLIL 262
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGSISNSVL 329
++AGFDA DPL +T Y M + L+D A G+++ A EGGYN + L
Sbjct: 263 LAAGFDANVWDPLARQMLTAASYREMTRLLIDAADRLCHGRLIAAHEGGYNPWYVPYCAL 322
Query: 330 ACMNVL 335
A + L
Sbjct: 323 AFLEEL 328
>gi|352106917|ref|ZP_08961677.1| histone deacetylase superfamily protein [Halomonas sp. HAL1]
gi|350597513|gb|EHA13648.1| histone deacetylase superfamily protein [Halomonas sp. HAL1]
Length = 364
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 169/306 (55%), Gaps = 22/306 (7%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
+PE+P R+ AI L+ A I + + K A + L VHT ++++ I F R
Sbjct: 45 YPEHPGRLTAIQQLLERAPI-EGLKIEGGKAATHEQLARVHTTSYLSDI-------FSLR 96
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
+++ ++ GS +AA +AAG+ I E V E SAFA+VRPPGHHAEP A
Sbjct: 97 GKNAWLDVDTTAVSPGSVDAAEVAAGTAIAAVEAVMEKRTKSAFALVRPPGHHAEPVRAR 156
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL+NNVAVAA+ + LG ++LIVDWD HHGN TQ +FW +P V+FF +HR
Sbjct: 157 GFCLFNNVAVAAAHARS---ALGCERVLIVDWDAHHGNGTQDIFWAEPDVMFFDIHRA-- 211
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
FYP + G +G G G INVP G GD YL + IL P A F PDII+
Sbjct: 212 APFYPGS--GHLEEVGAGLAEGTTINVPLPAG-AGDEAYLKAFRDILAPAAAWFKPDIIL 268
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSISNSVL 329
+SAGFD D V+ G+ + + A+ G++V LEGGYNL S++N
Sbjct: 269 VSAGFDPHWHDL--ALNVSYEGFGALTGFMQQLAEQHCDGRLVFVLEGGYNLESLANGTR 326
Query: 330 ACMNVL 335
A + VL
Sbjct: 327 AVLAVL 332
>gi|188997126|ref|YP_001931377.1| histone deacetylase superfamily protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932193|gb|ACD66823.1| histone deacetylase superfamily [Sulfurihydrogenibium sp. YO3AOP1]
Length = 306
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 170/325 (52%), Gaps = 23/325 (7%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
++VG YD+ +H+T G HPE+P R+ I L+ I + + L + A K +
Sbjct: 2 KKVGYFYDDIYLEHDTGIG--HPESPERLIYINKYLEP--IKDKLIHLKPRRASAKEITL 57
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
+H + I + + L+ ++ E S EAA +A G+ +E + + G
Sbjct: 58 IHDIYYPQEIMDFCAAG--------GGYLDPDTHVGEYSYEAAVMAVGAGLEAIDNIVNG 109
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
++ AF VRPPGHHAE D+AMGFC++NN+A+ A ++ + G NK+ I+D+D HHGN
Sbjct: 110 KIERAFCAVRPPGHHAEKDKAMGFCIFNNIAITARYVQQK----GFNKVFIIDFDAHHGN 165
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQK F+ D V +FS H + FYP G G G G GY NVP G GD
Sbjct: 166 GTQKAFYDDDTVFYFSTHEY---PFYPGT--GSKNEKGVGKGYGYTYNVPLPAG-TGDEV 219
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
Y ++ L + K F PDII++SAG+D DPL V+ G +++ ++ A
Sbjct: 220 YTEIYSQTLPELVKSFNPDIILVSAGYDLHQDDPLTYLEVSTEGIGTIVENILKSADVPY 279
Query: 312 VLALEGGYNLGSISNSVLACMNVLL 336
V LEGGYNL ++ SV + +L
Sbjct: 280 VFMLEGGYNLNALGESVRLTIEKML 304
>gi|221633525|ref|YP_002522750.1| hdac6 protein [Thermomicrobium roseum DSM 5159]
gi|221155670|gb|ACM04797.1| hdac6 protein [Thermomicrobium roseum DSM 5159]
Length = 368
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 198/382 (51%), Gaps = 54/382 (14%)
Query: 19 YDERMCKHNT-------PDGDY-----HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAK 66
YDER +H+T PDG HP + I+ + A+G+ + +V+ A+ A
Sbjct: 7 YDERFLQHDTGLDAHHLPDGSILDPVEHPSSARIIRRTAQLIAASGLLEGALVVAARPAT 66
Query: 67 DKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE------GSSEAAYLAAGS 120
+ L + HT ++ ++ ++ K +L+ GS EAA LAAG+
Sbjct: 67 EDELTAYHTPEYIAHVQQVT-------------KSGGGWLDPETPVVPGSWEAALLAAGA 113
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
IE+ + V G + AF ++RPPGHHA D+ MGFC++NNV +A G+ +I
Sbjct: 114 AIELTDVVLAGRASCAFGLLRPPGHHAMRDQGMGFCVFNNVVLATRHAQRR----GVQRI 169
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
+++DWDVHHGN TQ FW DP VLF S+H+ +YP G IG G +N+
Sbjct: 170 MVLDWDVHHGNGTQAAFWDDPSVLFVSLHQD---NWYPEG-WGAVDQIGGPDSEGTTVNI 225
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
P G G+ YLA + I++P+A+ F P++I +SAG DA+ DPLG VT GY M
Sbjct: 226 PLPPG-TGNRGYLAALERIVVPIARQFRPEMIFVSAGQDASMEDPLGRMLVTMRGYRAMA 284
Query: 301 KKLMDFAQ----GKIVLALEGGYNLGSISNSVLACMNVLLEDK-----PVAGSSEAYPFE 351
+ + D A G++V+ +EGGY+L + LA + ++ + P G+SE E
Sbjct: 285 RLVRDLADELCAGRLVVLMEGGYSLRYVPFCTLAVIEGMIGRESGIADPHEGTSELSQAE 344
Query: 352 STWR-----VIQAVRKKLSAFW 368
+R I+A R+ LS +W
Sbjct: 345 REFRPDQEAAIEAARQVLSRYW 366
>gi|56749066|sp|Q70I53.3|HDAH_ALCSD RecName: Full=Histone deacetylase-like amidohydrolase;
Short=HDAC-like amidohydrolase; Short=HDAH
gi|37496190|emb|CAE45336.1| histone deacetylase-like amidohydrolase [Alcaligenaceae bacterium
FB188]
Length = 369
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 164/293 (55%), Gaps = 19/293 (6%)
Query: 33 YHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS-KQFD 91
+H +P+ + + A+G + + A A D ++L H+ H+ +K +S+
Sbjct: 35 HHLAHPDTKRRFHELVCASGQIEHLTPIAAVAATDADILRAHSAAHLENMKRVSNLPTGG 94
Query: 92 SRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDE 151
D I + G E A L+AG +E+ RVA GEL++ +A+V PPGHHA +
Sbjct: 95 DTGDGIT------MMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPGHHAPHNA 148
Query: 152 AMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRH 211
AMGFC++NN +VAA + R LG+ ++ I+DWDVHHGN TQ ++W DP VL S+H+H
Sbjct: 149 AMGFCIFNNTSVAAGY---ARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQH 205
Query: 212 EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDI 271
F P D G+ T G G G GYNINVP G G+A YL D ++L + + P +
Sbjct: 206 L--CFPP--DSGYSTERGAGNGHGYNINVPLPPG-SGNAAYLHAMDQVVLHALRAYRPQL 260
Query: 272 IIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYN 320
II+ +GFDA+ DPL VT G+ M ++ +D A G+IV EGGY+
Sbjct: 261 IIVGSGFDASMLDPLARMMVTADGFRQMARRTIDCAADICDGRIVFVQEGGYS 313
>gi|163845938|ref|YP_001633982.1| histone deacetylase superfamily protein [Chloroflexus aurantiacus
J-10-fl]
gi|222523663|ref|YP_002568133.1| histone deacetylase superfamily protein [Chloroflexus sp. Y-400-fl]
gi|163667227|gb|ABY33593.1| histone deacetylase superfamily [Chloroflexus aurantiacus J-10-fl]
gi|222447542|gb|ACM51808.1| histone deacetylase superfamily [Chloroflexus sp. Y-400-fl]
Length = 352
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 186/345 (53%), Gaps = 27/345 (7%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS---KQF 90
H E R+ AI ++ G+ R + L + A + LL+VH+ + ++ ++ ++S Q
Sbjct: 19 HVEQAERLHAIRRAIEVDGLWPRLLQLPIRPATEAELLAVHSSSMLHRVRQLASYGGGQI 78
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD 150
DS Y+ S + A LAAG+ I +AE + G ++AFA+VRPPGHHA
Sbjct: 79 DS----------DTYVTAESWDVALLAAGATICMAEALVSGRCHNAFALVRPPGHHATDI 128
Query: 151 EAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHR 210
+MGFCL+NN+AVAA LL+ + +I IVD+DVHHGN TQ +F++D RVLF S+H
Sbjct: 129 RSMGFCLFNNIAVAARVLLDRH---HLRRIAIVDFDVHHGNGTQDIFYRDGRVLFCSIHA 185
Query: 211 HEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPD 270
YP + M G +NVP G GD Y V+ ++ PV + F P+
Sbjct: 186 ---APLYPGTGS-LHEMGDPRTAGGTTLNVPLPYG-TGDHGYEQVFQRVIGPVLRRFQPE 240
Query: 271 IIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGSISN 326
II++SAGFDA DP+G ++ G++ +++ L D+A G+I LEGGY+L +++
Sbjct: 241 IILVSAGFDAHWSDPIGPMALSIQGFARIVQHLCDWADELCDGRIGFVLEGGYSLPALAA 300
Query: 327 SVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTL 371
V+ + +LL AGS + I+ + L + P L
Sbjct: 301 GVVTTLRLLLGMP--AGSDPMGKMNAPEPAIEHIITSLYTYHPLL 343
>gi|254467831|ref|ZP_05081237.1| histone deacetylase superfamily protein [beta proteobacterium KB13]
gi|207086641|gb|EDZ63924.1| histone deacetylase superfamily protein [beta proteobacterium KB13]
Length = 324
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 181/334 (54%), Gaps = 18/334 (5%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQA-AGIPQRCVVLNAKEAKDKNL 70
K V +LYD+ +HNT G HPE P R+ + N L+ V ++A + +
Sbjct: 3 KTPVAILYDDIFLEHNTGSG--HPERPERLFDVINTLKNNPDFKYDLVWPKVRKASNSEI 60
Query: 71 LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAE 130
H+E ++ L++N + D+ S +++ ++ S + A ++ G+ + + +
Sbjct: 61 ALAHSEKYIQLVEN-EIRALDNDSPTFLSTGDTV-ISPISLDVAQMSVGASLVGIDEIMS 118
Query: 131 GELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHG 190
G +++AF+ RPPGHHA D MGFC+YN+ A+AA +L + + +++ILI+D+DVHHG
Sbjct: 119 GNVDAAFSFNRPPGHHATRDRGMGFCIYNHAAIAAKYL---QMKYSLSRILIIDFDVHHG 175
Query: 191 NSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
N TQ +F+ DP V +FS+H+H FYP + T I +G G YN+ VP GD
Sbjct: 176 NGTQDIFYDDPSVFYFSIHQH---PFYPGSGRPSETGISDGEGFTYNVEVPE---GSGDE 229
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA--- 307
++A + LLP K+F P+ IIISAGFDA D LG + T GY + + + A
Sbjct: 230 RFIAAFKDDLLPKMKNFQPEFIIISAGFDAHKNDLLGKLKYTSSGYGKVASLINNIAFTS 289
Query: 308 -QGKIVLALEGGYNLGSISNSVLACMNVLLEDKP 340
I+ LEGGY +I N+ A + L+ P
Sbjct: 290 NSKGIMYMLEGGYVPSNIDNASQAIIKELINFDP 323
>gi|269836949|ref|YP_003319177.1| histone deacetylase superfamily protein [Sphaerobacter thermophilus
DSM 20745]
gi|269786212|gb|ACZ38355.1| histone deacetylase superfamily [Sphaerobacter thermophilus DSM
20745]
Length = 321
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 175/326 (53%), Gaps = 25/326 (7%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVH 74
L+ +R H+T HPEN R+ AI L G+ VL+ + A +++ VH
Sbjct: 5 TALILSDRFRLHDT---GAHPENAQRLVAIERHLHECGLMNERAVLDPEPATPEDIALVH 61
Query: 75 TENHVNLIKNISSKQFDSRRDRIASKLNS-IYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
++ I++I+ + L+S Y++ + E A LAAG+ I+ + V +G
Sbjct: 62 DPEYIRFIEHIAHAG--------GAYLDSDTYVSPLTYETAMLAAGAAIQAVDYVLDGAA 113
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
F RPPGHHA + MGFC++NN+AVAA L R G+ ++ I+DWDVHHGN T
Sbjct: 114 PRVFVFPRPPGHHALRRQGMGFCIFNNIAVAARHALERR---GLRRVAIIDWDVHHGNGT 170
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q+ F+ VLFFSVH+ +P G G G Y +N+P G DADY
Sbjct: 171 QEAFYDTDEVLFFSVHQ---WPLFPGT--GHRDEEGVAYGQSYTVNLPLPPG-SDDADYA 224
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QG 309
V+D ++ P ++ PD+I++SAGFDA DPL VT G+ + +++ ++A +G
Sbjct: 225 RVFDDVIGPRLIEYAPDLILVSAGFDAHRDDPLALMEVTERGFYGIARRVREWADQLSEG 284
Query: 310 KIVLALEGGYNLGSISNSVLACMNVL 335
++VL LEGGYN ++ SV A + L
Sbjct: 285 RLVLLLEGGYNQRALVRSVEATIRAL 310
>gi|225848632|ref|YP_002728795.1| histone deacetylase 14 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644094|gb|ACN99144.1| histone deacetylase 14 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 306
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 171/326 (52%), Gaps = 23/326 (7%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
+RVG +YD+ KH+T G HPE+P R+ I L+ + + V ++ + A K +
Sbjct: 2 KRVGYIYDDIYLKHDTGIG--HPESPQRLVYINRYLEP--LKDKLVHISPRRATVKEITL 57
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLN-SIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
+H + I + S L+ ++ S +AA +A G+ ++ +++
Sbjct: 58 IHDTYYPQEIMDFCSAG--------GGYLDPDTHVGIHSYDAAVMAVGAGLQAVDKILSN 109
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
E+ F VRPPGHHAE D+AMGFC++NN+A+ A + ++ G K+ I+D+D HHGN
Sbjct: 110 EVERVFCAVRPPGHHAEKDKAMGFCIFNNIAITARYAQSK----GFKKVFIIDFDAHHGN 165
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQK F+ D V +FS H + FYP G G G G GY NVP G GD
Sbjct: 166 GTQKAFYDDDTVFYFSTHEY---PFYPGT--GSKDEKGVGKGYGYTYNVPLPAG-TGDDV 219
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKI 311
YL ++ L P+ K F PDII++SAG+D DPL V+ G +++ ++
Sbjct: 220 YLQIYQEELPPLVKSFDPDIILVSAGYDLHEDDPLTYLEVSTEGIGKIVESILQLKDVPY 279
Query: 312 VLALEGGYNLGSISNSVLACMNVLLE 337
+ LEGGYNL +I SV + +LE
Sbjct: 280 IFMLEGGYNLDAIGESVKLTIEKMLE 305
>gi|268532770|ref|XP_002631513.1| C. briggsae CBR-HDA-6 protein [Caenorhabditis briggsae]
Length = 505
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 178/320 (55%), Gaps = 20/320 (6%)
Query: 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI--PQRCVVLNAKEAKDKN 69
K++V ++ D + +H+ P YH E R+ I+ +L+ +G+ R L +EA +K
Sbjct: 2 KKKVYVVMDRQEERHDQPWSSYHIETSKRLDVIYERLKESGLFDDTRIEHLPRREATEKE 61
Query: 70 LLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVA 129
+ SVHT+ +V +K+ + D +++ SK I++N + + A LAAGS I++ VA
Sbjct: 62 IQSVHTKRYVENVKSTETMDAD-QQEAFCSKYEDIFVNSATWKRAKLAAGSAIDLVTAVA 120
Query: 130 EGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGI-NKILIVDWDVH 188
+ A +RPPGHHA PDE GFC++NNVA+AA E G K++IVD+DVH
Sbjct: 121 INRI-PGIAFIRPPGHHAMPDEGCGFCIFNNVAIAA----KEALRCGFAKKVMIVDYDVH 175
Query: 189 HGNSTQKMFWK-DPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYN--INVPWENG 245
N TQ+ V S+HR+E G F+P M G Y +N+P
Sbjct: 176 AANGTQECIESMGDNVRLISIHRYENGNFWP-------NMPQTGIYHNYTNTMNLPLNTT 228
Query: 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD 305
D+DY A++ HI++P F PD+II+S+GFDA+ GDP G VTP G++ M++ +M+
Sbjct: 229 GLIDSDYCALFSHIIIPSIHSFEPDLIIVSSGFDASLGDPEGYMNVTPAGFATMIRMMMN 288
Query: 306 FAQGKIVLALEGGYNLGSIS 325
+ LEGGY L +++
Sbjct: 289 TGI-PVAAVLEGGYFLEALA 307
>gi|320352964|ref|YP_004194303.1| histone deacetylase superfamily protein [Desulfobulbus propionicus
DSM 2032]
gi|320121466|gb|ADW17012.1| histone deacetylase superfamily [Desulfobulbus propionicus DSM
2032]
Length = 343
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 182/355 (51%), Gaps = 31/355 (8%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GLL+D R +H P EN R++ ++ L+ + +EA ++ +VH+
Sbjct: 6 GLLFDRRYYEHGIPQVSL--ENAGRVRGLYRTLEGPQYAGQLRTFLPREASSADIEAVHS 63
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
++ ++ + DR YL E S A LAAG +E+A+R+ +GE++
Sbjct: 64 AFYLEQLREHVNIDDPYSYDR------DTYLMEQSLYTAALAAGGCLELADRILDGEIDY 117
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
FA++RPPGHHAEP MGFC++NNVA+ A +L R G+ +ILIVD+DVHHGN TQ
Sbjct: 118 GFALIRPPGHHAEPGRGMGFCVFNNVAITAQYL---RRVYGLRRILIVDFDVHHGNGTQT 174
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
+F++ +V F S+H+ + F G G G GY IN+P + + D +YL +
Sbjct: 175 VFYETDQVFFVSIHQEKIFPF-----SGSARETGSDKGRGYTINLPV-HPQFSDQEYLYL 228
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKI 311
+L V + + P II++SAGFD DP+ ++ Y+ + + L A ++
Sbjct: 229 LSRVLGGVVEQYLPQIILVSAGFDGHCDDPISRVLLSTQWYATVTELLKYLAHEACNDRL 288
Query: 312 VLALEGGYNLGSISNSVLACMNVLL----------EDKPVAGSSEAYPFESTWRV 356
+ LEGGYN S+ SVL ++ LL + A E +P + W V
Sbjct: 289 LFVLEGGYNPDSLQASVLVTVDSLLHPASRRPGVVHSQRAAKILENHPLHAFWTV 343
>gi|94263759|ref|ZP_01287566.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
gi|93455859|gb|EAT06022.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
Length = 349
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 199/365 (54%), Gaps = 30/365 (8%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
R+ ++ E KH+ G H E P R+ ++ +L + +R + A + L
Sbjct: 2 RKTAIMQSEVFLKHDPGPG--HVEVPARLLGLYRELASDEQRRRFLFPEFAAAGQEVLAL 59
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
H+ ++ + + + F+ + + S EAA LAAG+ + E VA GE
Sbjct: 60 NHSHKYIAQVAATAGRPFEVLDP-------DTHTSPRSYEAACLAAGAAVAAVELVAAGE 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+++AFA+VRPPGHHAE + GFCL+NN+A+AA + R +LG +ILI DWD+HHGN
Sbjct: 113 VDNAFALVRPPGHHAEHAHSSGFCLFNNIAIAAHY---ARQKLGFKRILIFDWDLHHGNG 169
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ F +VLFFS H+F F P + G + +G G G GY INVP G+ DA +
Sbjct: 170 TQHAFDDSDQVLFFST--HQFPCF-PGS--GTLSEVGRGKGEGYTINVPLPGGQ-DDAAF 223
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
+ + +L+P+A+ + P++I++SAGFD AGDPLG V+ GY+ M + L + A Q
Sbjct: 224 ARICNELLVPLARAYQPELIMVSAGFDTYAGDPLGSMMVSELGYAYMTRVLTELASQLCQ 283
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKP-----VAGSSEAYPFESTWRVIQAVRKK 363
++VL LEGGYNLG + VL+C+ + D+ A +A P R ++ R+
Sbjct: 284 QRLVLVLEGGYNLGIMERGVLSCLGEMAADQAREEAEFAALRQAAP---PLRALEQAREV 340
Query: 364 LSAFW 368
+W
Sbjct: 341 AKKYW 345
>gi|254454403|ref|ZP_05067840.1| histone deacetylase family protein [Octadecabacter arcticus 238]
gi|198268809|gb|EDY93079.1| histone deacetylase family protein [Octadecabacter arcticus 238]
Length = 307
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 175/328 (53%), Gaps = 30/328 (9%)
Query: 15 VGLLYDERMC-KHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
V L + C H TP G HPE R+ A+ L + + ++A A D +LL
Sbjct: 2 VTALITHKACYDHVTPQG--HPEQVARLDAVLGALAGMDLLR----VDAPLAADDDLLRA 55
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H + HV+ IK + + D +++ G+ EAAY AAG V++ + V GE
Sbjct: 56 HPKGHVDTIKAAAPSEGWRSLD------ADTHMSIGTLEAAYRAAGGVVKAVDLVMAGEA 109
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
+AFA VRPPGHHAE + AMGFC + +VAVAA L G+ ++ I+D+DVHHGN T
Sbjct: 110 GNAFAAVRPPGHHAERETAMGFCFFGSVAVAAKHALEFH---GLKRVAILDFDVHHGNGT 166
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q + D R+LF S H+ YP T G+G +NVP +G CG A +
Sbjct: 167 QDLVEGDARILFCSSHQM---PLYPGTGAAHET------GVGNVVNVPLPDG-CGSAKFR 216
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QG 309
A W+ + P + F P++++ISAGFDA A DPL G + ++ + KL D A G
Sbjct: 217 AAWEREVFPRVEAFKPELLLISAGFDAHADDPLAGMMLHEDDFAWITGKLCDLADKHCSG 276
Query: 310 KIVLALEGGYNLGSISNSVLACMNVLLE 337
++V ALEGGY+L ++ S A ++ L E
Sbjct: 277 RVVSALEGGYDLEALGRSARAHVDTLKE 304
>gi|418686823|ref|ZP_13247987.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741677|ref|ZP_13298051.1| histone deacetylase family protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421089968|ref|ZP_15550769.1| histone deacetylase family protein [Leptospira kirschneri str.
200802841]
gi|410001231|gb|EKO51845.1| histone deacetylase family protein [Leptospira kirschneri str.
200802841]
gi|410738530|gb|EKQ83264.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751125|gb|EKR08104.1| histone deacetylase family protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 278
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 163/279 (58%), Gaps = 26/279 (9%)
Query: 63 KEAKDKNLLSVHTENHVNLIKNISSKQ--FDSRRDRIASKLNSIYLNEGSSEAAYLAAGS 120
K+ ++ L +H++NH+ I+N K+ FDS E S +AY AA S
Sbjct: 16 KKFPNEFLNEIHSKNHIQKIENSKGKRGYFDSDTP----------FTEKSWISAYSAANS 65
Query: 121 VIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKI 180
I ++E + G + + F+++RPPGHHAE + MGFC+ NNVA+ A +L N G KI
Sbjct: 66 GIILSESLISGTIKNGFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNN----GYKKI 121
Query: 181 LIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINV 240
I+DWDVHHGN TQ++F++DP + + S+H+ FYP G T G+G G+G N+
Sbjct: 122 FIIDWDVHHGNGTQEIFYEDPNIFYLSIHQF---PFYPMT--GLITETGKGKGIGTTKNI 176
Query: 241 PWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVML 300
P + A Y+ + I++P + F PDI++ISAGFDA DPLGG +T G+ +
Sbjct: 177 PMQANSENQA-YIQKFKEIVVPTMERFDPDIVLISAGFDAHKDDPLGGMNLTTKGFEDLT 235
Query: 301 KKLMDFAQ----GKIVLALEGGYNLGSISNSVLACMNVL 335
+ +++ A GK++ LEGGY+L ++S SV A + VL
Sbjct: 236 RIILESADRICGGKVLSFLEGGYDLTALSESVEAHIAVL 274
>gi|290477143|ref|YP_003470058.1| histone deacetylase-like amidohydrolase (HDAC-like amidohydrolase)
(HDAH) [Xenorhabdus bovienii SS-2004]
gi|289176491|emb|CBJ83300.1| Histone deacetylase-like amidohydrolase (HDAC-like amidohydrolase)
(HDAH) [Xenorhabdus bovienii SS-2004]
Length = 371
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 181/343 (52%), Gaps = 35/343 (10%)
Query: 13 RRVGLLYDERMCKHNT----------------PDGDYHPENPNRIKAIWNKLQAAGIPQR 56
R+ G +DE HN P G H E+P + + + + +G+
Sbjct: 3 RKTGFFFDELCFWHNMGSMHTFIFPVGGWIQPPCGAGHAESPETKRRMKSLMDVSGLSHS 62
Query: 57 CVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYL 116
+++A+ + L VHTE+++ K +S D+ + S+ + L GS E A L
Sbjct: 63 LELMSAEPIDEATLRLVHTESYLQRFKYLS----DNGGGTLGSEAS---LGAGSYEIAKL 115
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
+AG + V +GEL++A+++ RPPGHH PD+AMGFC N+++A + + +LG
Sbjct: 116 SAGLTYAAVKAVLQGELDNAYSLSRPPGHHCLPDQAMGFCFLANISLA---IEKAKEQLG 172
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
+ ++ +VDWDVHHGN TQ +FW+ VL S+H+ YPA G + IGEGPG G+
Sbjct: 173 LGRVAVVDWDVHHGNGTQHIFWQRDDVLTISLHQDR---CYPAGYSG-ESDIGEGPGEGF 228
Query: 237 NINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY 296
NIN+P G G Y+ D I++P + + P++III+ G+DA DPL ++ +
Sbjct: 229 NINIPLMAG-AGHDSYMYAMDQIVMPALRRYQPELIIIACGYDANGFDPLARMQLHSDSF 287
Query: 297 SVMLKKLM----DFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
M +K+ +F GK+V+ EGGY+ + LA M L
Sbjct: 288 REMTRKMQQIADEFCHGKLVMVHEGGYSEAYVPFCGLAVMEEL 330
>gi|94264760|ref|ZP_01288539.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
gi|93454806|gb|EAT05059.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
Length = 349
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 199/365 (54%), Gaps = 30/365 (8%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
R+ ++ E +H+ G H E P R+ ++ +L + +R + A + L
Sbjct: 2 RKTAIMQSEVFLEHDPGPG--HVEVPARLLGLYRELASDEQRRRFLFPEFAAAGQEVLAL 59
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
H+ ++ + + + F+ + + S EAA LAAG+ + E VA GE
Sbjct: 60 NHSHKYIAQVAATAGRPFEVLDP-------DTHTSPRSYEAACLAAGAAVAAVELVAAGE 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+++AFA+VRPPGHHAE D + GFCL+NN+A+AA + R +LG +ILI DWD+HHGN
Sbjct: 113 VDNAFALVRPPGHHAEHDHSSGFCLFNNIAIAAHY---ARQKLGFKRILIFDWDLHHGNG 169
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ F +VLF S H+F F P + G + +G G G GY INVP G+ DA +
Sbjct: 170 TQHAFDDSDQVLFLST--HQFPCF-PGS--GTLSEVGRGKGEGYTINVPLPGGQ-DDAAF 223
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----Q 308
+ + +L+P+A+ + P++I++SAGFD AGDPLG V+ GY+ M + L + A Q
Sbjct: 224 ARICNELLVPLARAYQPELIMVSAGFDTYAGDPLGSMMVSELGYAYMTRVLTELAAQLCQ 283
Query: 309 GKIVLALEGGYNLGSISNSVLACMNVLLEDKP-----VAGSSEAYPFESTWRVIQAVRKK 363
++VL LEGGYNLG + VL+C+ + D+ A +A P R ++ R+
Sbjct: 284 QRLVLVLEGGYNLGIMERGVLSCLGEMAADQAREEAEFAALRQAAP---PLRALEQAREV 340
Query: 364 LSAFW 368
+W
Sbjct: 341 AKKYW 345
>gi|87310780|ref|ZP_01092907.1| acetoin utilization protein [Blastopirellula marina DSM 3645]
gi|87286537|gb|EAQ78444.1| acetoin utilization protein [Blastopirellula marina DSM 3645]
Length = 311
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 173/317 (54%), Gaps = 24/317 (7%)
Query: 17 LLY-DERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
LLY D +H+T + HPE+ R+ A+ +L+ G+ +C+ A +++ +HT
Sbjct: 3 LLYSDHEFLEHDTGN---HPESAQRLLAVTARLEQTGLLDQCLRPQWAHATAQDIQLIHT 59
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
++ S K RI ++ S A LA G+ ++ RV G+ ++
Sbjct: 60 AAMRTSVEGFSLKG----GGRIE---EDTVVSHDSYHVATLAVGAAMDATRRVLAGDSSN 112
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
A +VRPPGHHA P MGFCL+N+VA+AA + L+ +L ++++LIVDWDVHHGN TQ
Sbjct: 113 ALCLVRPPGHHATPTMPMGFCLFNSVAIAAQYALS---KLDLDRVLIVDWDVHHGNGTQD 169
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
FW+ R F S+HR+ FYP D IG+ GLGY N+P + G D+++
Sbjct: 170 AFWESERAAFLSIHRYP---FYPGTGDTL--EIGQRAGLGYTRNLPLKYG-VSRRDFISQ 223
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD----FAQGKI 311
++ L + P +I++SAGFDA A DP+G + Y + + ++D +A GK+
Sbjct: 224 FERALEDITAKVRPQLILLSAGFDAHAADPVGSLGLETEDYDELTQIVLDAASVYAGGKL 283
Query: 312 VLALEGGYNLGSISNSV 328
V LEGGYN ++ SV
Sbjct: 284 VSILEGGYNPEKLAESV 300
>gi|157368861|ref|YP_001476850.1| histone deacetylase superfamily protein [Serratia proteamaculans
568]
gi|157320625|gb|ABV39722.1| histone deacetylase superfamily [Serratia proteamaculans 568]
Length = 370
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 179/344 (52%), Gaps = 34/344 (9%)
Query: 11 IKRRVGLLYDERMCKHNT---------------PDGDYHPENPNRIKAIWNKLQAAGIPQ 55
+KR+ G L+DER H+T P G H E+P + + N + +G+
Sbjct: 1 MKRKTGFLFDERCFWHSTGLHATTLPVGGWVQPPSGAGHAESPETKRRMKNLMDVSGLSH 60
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ +L+A+ A D++LL +H N++ K +S D+ + + L GS E A
Sbjct: 61 QLSLLSAELATDEDLLRIHPANYLQRFKQLS----DNGGGMLGEEAP---LGPGSYEIAK 113
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+AG E V +GEL +A+A+ RPPGHH PD++MGFC N+ +A + + +
Sbjct: 114 LSAGLACAAVEAVLQGELENAYALSRPPGHHCLPDQSMGFCFLANIPIA---IERAKAKY 170
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
G+ K+ ++DWDVHHGN TQ ++W+ VL S+H+ G F PA G G G G G
Sbjct: 171 GLGKVAVLDWDVHHGNGTQHIYWQRDDVLTLSLHQD--GCF-PAGYSGEQDR-GAGAGEG 226
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
YN+N+P G GD YL I++P K F P++II++ G+DA A DPL ++
Sbjct: 227 YNVNIPLLAG-AGDDGYLYAMRQIVIPALKQFQPELIIVACGYDANALDPLARMQLHSDS 285
Query: 296 YSVMLKKLMDFA----QGKIVLALEGGYNLGSISNSVLACMNVL 335
+ M + D A GK+V+ EGGY + LA M L
Sbjct: 286 FRSMTALVQDAADRLCNGKLVMVHEGGYAESYVPFCGLAVMEQL 329
>gi|420239566|ref|ZP_14743875.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF080]
gi|398079774|gb|EJL70614.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF080]
Length = 372
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 188/352 (53%), Gaps = 26/352 (7%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
H ENP + N ++ +G+ R ++A+ +++L HT ++++ IK +S
Sbjct: 39 HAENPATKRRFKNLVEVSGLSDRLARIDAEPVTEEDLALFHTRDYISRIKAMSGD----- 93
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
R AS L GS E A L+AG + + V G +++ +A+VRPPGHHAE D +
Sbjct: 94 RGGDASYLTP--FGRGSFEIACLSAGGTFAMVDAVLSGRVSNGYALVRPPGHHAEHDRGL 151
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL+ NV VA +L R G+ +I +DWDVHHGN TQ F+ DP VL S+H+
Sbjct: 152 GFCLFGNVPVA---ILKARKVHGMGRIATIDWDVHHGNGTQSAFYADPDVLTISIHQERL 208
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
+P D G + GEGPG G+N+N+P G G Y+A ++ +LP + P++I+
Sbjct: 209 ---FP-GDRGDRSERGEGPGEGFNLNIPLPPG-SGHGAYMAAFEQAVLPALARYKPELIV 263
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSISNSVL 329
+S+GFDA+A DP G + Y M + LM A G++ ++ EGGY+ ++ V
Sbjct: 264 VSSGFDASAIDPFGRMMLHSDSYREMARLLMQAADTLCGGRLAMSHEGGYS----ASYVP 319
Query: 330 ACMNVLLEDKPVAGSSEAYPFESTWR--VIQAVRKKLSAFWPTLADELPTKL 379
C +LE + A PF +R Q+++ +A +LA EL K+
Sbjct: 320 YCGLAVLEQLSGIRTGVADPFLDVFRNYAGQSLQPHQAAAI-SLASELVEKI 370
>gi|171911106|ref|ZP_02926576.1| histone deacetylase superfamily protein [Verrucomicrobium spinosum
DSM 4136]
Length = 316
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 175/324 (54%), Gaps = 21/324 (6%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GL+ D +H+T G HPE+P R +A+ L AG+ + + ++ A D +L HT
Sbjct: 7 GLVLDAISAEHDTGGG--HPESPQRYQAVARALTTAGLTKTMTAITSRPATDDEILLCHT 64
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
++ K + R +++ +I S E A A GSV+E + V G+L +
Sbjct: 65 REYLETAK----RDVAGGRSDLSTGDTAICPR--SLEVARHATGSVVEAVDAVMTGKLKN 118
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
AF VRPPGHHA P + MGFCL+NN+AV A + + G ++LIVDWDVHHGN TQ
Sbjct: 119 AFCAVRPPGHHARPAQGMGFCLFNNIAVGARV---AQKKHGAGRVLIVDWDVHHGNGTQD 175
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
+F+ D V+F S H+ +YP G+ GEG G G +N P+ G G +
Sbjct: 176 IFYADGSVIFASTHQ---APWYPYT--GWAEEKGEGKGKGMILNFPFPAG-AGYGEIGGA 229
Query: 256 WDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKI 311
+H +L A PD+++ISAGFD+ DPLG ++T ++ + K LM FA G++
Sbjct: 230 LEHHILQEAARLKPDLVMISAGFDSRVDDPLGQFQLTDANFAALTKTLMRFADEHCSGRL 289
Query: 312 VLALEGGYNLGSISNSVLACMNVL 335
V LEGGYNL + +V A + L
Sbjct: 290 VSVLEGGYNLDGLGKAVTAHVTAL 313
>gi|408791371|ref|ZP_11202981.1| histone deacetylase family protein [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408462781|gb|EKJ86506.1| histone deacetylase family protein [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 313
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 182/328 (55%), Gaps = 27/328 (8%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAK--EAKDKNLL 71
+ G+++ E KHNT G HPE R+ +I + L + +P + + EA +
Sbjct: 5 KTGIVFHEEFLKHNTGPG--HPETHGRLVSILDHL--SDLPSKNFLWKKDFLEAPLLVIS 60
Query: 72 SVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEG 131
S+H +V L+ + ++ D + YL AA LA G+ + +A+ V G
Sbjct: 61 SIHDPTYVRLVGRVCEEKGTGYLDGDTVFSSHSYL------AASLAVGAGLYLADEVLLG 114
Query: 132 ELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGN 191
L + A+VRPPGHHAE D AMGFC++NN+A+ A +L ++ GI +ILI+DWDVHHGN
Sbjct: 115 NLKNGMALVRPPGHHAEADHAMGFCIFNNIAITAKYLQSK----GIKRILILDWDVHHGN 170
Query: 192 STQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDAD 251
TQ F++D V F S+H+ FYP G + G+G G+G +N+P G G+ +
Sbjct: 171 GTQHQFYEDDSVYFISLHQF---PFYPGT--GSLSERGKGKGIGTTLNIPLARG-AGEFE 224
Query: 252 YLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMD----FA 307
YL+ + I + K F P+ +++SAGFDA DPLGG ++ + + +++ +A
Sbjct: 225 YLSSFPSIQREMEK-FQPEFVLVSAGFDAHKKDPLGGMNLSTSSFGIFTQEIQKIANTYA 283
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVL 335
G+++ LEGGY+L +++ SV + L
Sbjct: 284 SGRMISFLEGGYDLNALAESVKLHLETL 311
>gi|254440544|ref|ZP_05054038.1| Histone deacetylase family, putative [Octadecabacter antarcticus
307]
gi|198255990|gb|EDY80304.1| Histone deacetylase family, putative [Octadecabacter antarcticus
307]
Length = 307
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 172/316 (54%), Gaps = 29/316 (9%)
Query: 26 HNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNI 85
H TP G HPE R+ A+ + + V ++A A D +LL H + H+ IK
Sbjct: 14 HVTPQG--HPEQVARLDAVLGAMDGMDL----VRVDAPLAADDDLLRAHPKAHIQTIKAA 67
Query: 86 SSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGH 145
+ + D +++ G+ EAAY AAG+V++ + V G++ +AFA VRPPGH
Sbjct: 68 APSEGWRSLD------ADTHMSVGTLEAAYRAAGAVVKAVDLVMAGDVGNAFAAVRPPGH 121
Query: 146 HAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLF 205
HAE + AMGFC + +VAVAA L G+ ++ I+D+DVHHGN TQ + +D R+LF
Sbjct: 122 HAERETAMGFCFFGSVAVAAKHALEFH---GLKRVAILDFDVHHGNGTQDLVEEDARILF 178
Query: 206 FSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAK 265
S H+ +P T G+G +NVP +G CG A + W+ + P
Sbjct: 179 CSSHQM---PLFPGTGAAHET------GVGNVVNVPLPDG-CGSATFRTAWERQVFPRVD 228
Query: 266 DFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNL 321
F P++++ISAGFDA A DPL G + ++ + KL D A G++V ALEGGY+L
Sbjct: 229 AFKPELLLISAGFDAHANDPLAGVLLHEDDFAWITGKLCDLADKHCSGRVVSALEGGYDL 288
Query: 322 GSISNSVLACMNVLLE 337
++ S A ++VL E
Sbjct: 289 EALGRSARAHVDVLKE 304
>gi|386284480|ref|ZP_10061702.1| acetoin utilization protein [Sulfurovum sp. AR]
gi|385344765|gb|EIF51479.1| acetoin utilization protein [Sulfurovum sp. AR]
Length = 307
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 172/324 (53%), Gaps = 22/324 (6%)
Query: 14 RVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSV 73
+V + D+ +H+T G HPE+P R++AI ++ + + + A ++ + V
Sbjct: 2 KVAYITDDIYLQHDT--GAMHPESPERLRAINKAIEV--LHPSLIFTSPISASERIIELV 57
Query: 74 HTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGEL 133
H+ H+ IKN+ + D + S S +AA +A G+ + + + E
Sbjct: 58 HSPEHIETIKNVCAYDGSIDSDTVCSV--------DSFDAARMAVGAGVVALDGIKSEEF 109
Query: 134 NSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNST 193
F VRPPGHHA P +AMGFCL+NN+A+AA + +G K++IVD+DVHHGN T
Sbjct: 110 ERVFCAVRPPGHHARPAQAMGFCLFNNIAIAARY----AQSIGYKKVMIVDFDVHHGNGT 165
Query: 194 QKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYL 253
Q F+ D V +FS H+ +P G + GEG G+GY N P G D++ L
Sbjct: 166 QDTFYADDSVFYFSSHQ---AYIFPGT--GAVSEKGEGKGIGYTANFPVMAGTT-DSELL 219
Query: 254 AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVL 313
++++ L + KDF PDII++SAG+D DPL +T G +++ ++D A V
Sbjct: 220 DIYENDLPSLVKDFNPDIILVSAGYDLHESDPLAQLNITTEGIRDIVRCILDSADVPFVF 279
Query: 314 ALEGGYNLGSISNSVLACMNVLLE 337
LEGGYN+ ++ + + +L+
Sbjct: 280 FLEGGYNVNALGENAKVTLEEMLK 303
>gi|296118475|ref|ZP_06837053.1| histone deacetylase family protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295968374|gb|EFG81621.1| histone deacetylase family protein [Corynebacterium ammoniagenes
DSM 20306]
Length = 374
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 185/345 (53%), Gaps = 31/345 (8%)
Query: 11 IKRRVGLLYDERMCKHNTPDGDYHPENP--------------NRIKAIWNKLQAAGIPQR 56
+ R VG L+D +T G + P +P + + +Q + + +
Sbjct: 1 MSRNVGYLWDTLYGWMDTGSGGFVPADPAAGLQPIGRHLAHPDTKRRFHEVVQTSALRDQ 60
Query: 57 CVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYL 116
L A+ A +++LL VHT H+ IK+ SS+ AS L +G E L
Sbjct: 61 LTNLQAQPASEEDLLRVHTAEHIEYIKDQSSQPKGGDAGDGASP-----LGKGGYEIGLL 115
Query: 117 AAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELG 176
AAG I+ + V GE+++A+A++ PPGHHAE + MGFCL+NN +VAA++ + G
Sbjct: 116 AAGGAIQATKSVLTGEVDTAYALINPPGHHAERERGMGFCLFNNASVAAAY---AKEHHG 172
Query: 177 INKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGY 236
+ ++ +VDWDVHHGN TQ+++W +P VL S+H+++ +PAN GF G LG
Sbjct: 173 LTRVAVVDWDVHHGNGTQQIWWDNPDVLTISLHQNK---CFPAN-SGFREDNGGPDALGT 228
Query: 237 NINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY 296
+N+P G G+A Y ++ ++LP + F P++II+++GFDA+A DPL VT G+
Sbjct: 229 ALNIPLPPG-SGNAVYNLAFEEVVLPALEAFQPELIIVASGFDASAMDPLARQMVTQDGF 287
Query: 297 SVMLKKLMDFA----QGKIVLALEGGYNLGSISNSVLACMNVLLE 337
M + ++ A GK+V EGGY+ + L + VL +
Sbjct: 288 KQMTEMIVSAADSICDGKLVFVQEGGYSPYYLPICGLGVLEVLTQ 332
>gi|225851408|ref|YP_002731642.1| histone deacetylase 14 [Persephonella marina EX-H1]
gi|225645028|gb|ACO03214.1| histone deacetylase 14 [Persephonella marina EX-H1]
Length = 306
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 171/329 (51%), Gaps = 31/329 (9%)
Query: 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLS 72
R+VG +YD KH+T +G HPE P R+ I + + I + V + + A K +
Sbjct: 2 RKVGYIYDPVYLKHDTGEG--HPERPERVSTIDSYIDE--IKKDLVEIKPRRASAKEITL 57
Query: 73 VHTENHVNLIKNISSK-----QFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAER 127
VH + I ++ S D+R SI+ S EAA A G+ +E +
Sbjct: 58 VHDTYYPQEIMDLCSAGGTYLDPDTR--------CSIF----SYEAAVYAVGAGLEAVDS 105
Query: 128 VAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDV 187
+ EG++ FA VRPPGHHAE +AMGFC++NNVA+ A + + G KI I+D+D
Sbjct: 106 IMEGKVERVFANVRPPGHHAEFSKAMGFCIFNNVAITARYAQKK----GYEKIFIIDFDA 161
Query: 188 HHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247
HHGN TQK F+ D V +FS H++ FYP G G G GLG+ NVP G
Sbjct: 162 HHGNGTQKAFYDDDTVFYFSTHQY---PFYPGT--GSAEEKGVGKGLGFTYNVPLPAG-T 215
Query: 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA 307
GD Y ++ +L + F PD++++SAG+D DPL VT G +++ ++ +
Sbjct: 216 GDETYEDIYSMMLPDLVYHFRPDMVLVSAGYDLHIDDPLTHLEVTTEGIGKIVENILKTS 275
Query: 308 QGKIVLALEGGYNLGSISNSVLACMNVLL 336
+ LEGGYNL ++ S L + +L
Sbjct: 276 DSPFIFMLEGGYNLQALGKSALITVKKML 304
>gi|194381452|dbj|BAG58680.1| unnamed protein product [Homo sapiens]
Length = 296
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 147/249 (59%), Gaps = 4/249 (1%)
Query: 16 GLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHT 75
GL+ DE++ + + D PE P R+ AI +L G+ RCV A+ A+ + L+ VH+
Sbjct: 32 GLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHS 91
Query: 76 ENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNS 135
+++L++ R +A +S+YL+ S A LA+GSV+ + + V E+ +
Sbjct: 92 LEYIDLMETTQYMNEGELR-VLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRN 150
Query: 136 AFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQK 195
AI+RPPGHHA+ G+C++N+VAVAA + + I ++L VDWDVHHG TQ
Sbjct: 151 GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHR---IRRVLNVDWDVHHGQGTQF 207
Query: 196 MFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAV 255
F +DP VL+FS+HR+E G F+P ++ G G G GY INVPW DADY+A
Sbjct: 208 TFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAA 267
Query: 256 WDHILLPVA 264
+ H+LLPVA
Sbjct: 268 FLHVLLPVA 276
>gi|11497747|ref|NP_068969.1| acetylpolyamine aminohydrolase [Archaeoglobus fulgidus DSM 4304]
gi|3024859|sp|O30107.1|Y130_ARCFU RecName: Full=Uncharacterized protein AF_0130
gi|2650515|gb|AAB91099.1| acetylpolyamine aminohydrolase (aphA) [Archaeoglobus fulgidus DSM
4304]
Length = 359
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 190/373 (50%), Gaps = 39/373 (10%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGI--PQRCVVLNAKEAKDKNLLS 72
G+++ E KH HPE R+ ++L+ GI +R V+L +A +++L
Sbjct: 3 TGIVFHEEYLKHE--QSPTHPERRERLAYTMDQLREEGIFESERIVLLEPFKASLEDVLE 60
Query: 73 VHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE 132
VHTE +V + + +S++ I +I + G + A LAAG I A+ V E
Sbjct: 61 VHTEEYVRFL------EMESKKGGIIDFDTNIPV--GVFDRALLAAGGAIRAAQAVLNKE 112
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+AFA++RPPGHHA+P GFC NN+A+ +LL + G +I I+DWD HHG+
Sbjct: 113 CENAFAMIRPPGHHAKPYIGAGFCYLNNMAIMVKWLLKQ----GFERIAILDWDAHHGDG 168
Query: 193 TQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADY 252
TQ++F+ D RVLF S H+ YP G+ G G G GY +N+P G GD Y
Sbjct: 169 TQEIFYNDDRVLFISTHQM---PLYPGT--GYPEECGTGKGEGYTVNIPLPPG-TGDEGY 222
Query: 253 LAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ---- 308
+ V D I+ PV +F P I ISAG D DP+ +T GY+ M+++ + A+
Sbjct: 223 MMVIDEIIEPVVNEFKPQFIAISAGQDNHFTDPITSLALTARGYAEMMRRAVAMAEKHCD 282
Query: 309 GKIVLALEGGYNL-GSISNSVLACMNVLLE-DKPVAGSSEAYPFESTWRV---------- 356
G++V LEGGY++ G++ + L + + D E Y E WR
Sbjct: 283 GRLVAVLEGGYSVEGALPYTNLGIIAAMAGFDLSAIREPENYLPELLWRKRDSALVKLKH 342
Query: 357 -IQAVRKKLSAFW 368
I+ V++ S +W
Sbjct: 343 NIEDVKRVHSKYW 355
>gi|448240336|ref|YP_007404389.1| histone deacetylase superfamily protein [Serratia marcescens WW4]
gi|445210700|gb|AGE16370.1| histone deacetylase superfamily protein [Serratia marcescens WW4]
Length = 370
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 179/344 (52%), Gaps = 34/344 (9%)
Query: 11 IKRRVGLLYDERMCKHNT---------------PDGDYHPENPNRIKAIWNKLQAAGIPQ 55
+KR G L+DER H+T P G H E+P + + N + +G+ +
Sbjct: 1 MKRTTGFLFDERCFWHSTGLHATTLPVGGWVQPPSGAGHAESPETKRRMKNLMDVSGLSR 60
Query: 56 RCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
+ +L+A+ A +++LL +H +++ K +S DS + + L GS E A
Sbjct: 61 QLTLLSAEPATEEDLLRIHPAHYLQRFKQVS----DSGGGLLGEEAQ---LGPGSYEIAK 113
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
L+AG E V +GEL++A+A+ RPPGHH PD++MGFC N+ +A + +
Sbjct: 114 LSAGLACAAVEAVLQGELDNAYALSRPPGHHCLPDQSMGFCFLANIPIA---IERAKARY 170
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
G+ K+ ++DWDVHHGN TQ ++W+ VL S+H+ G F PA G GEG G G
Sbjct: 171 GLGKVAVLDWDVHHGNGTQHIYWQRGDVLTLSLHQD--GCF-PAGYSGEQDR-GEGAGAG 226
Query: 236 YNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYG 295
N+NVP G GD YL I++P + F P++II++ G+DA A DPL ++
Sbjct: 227 CNVNVPMLAG-AGDDGYLHAMRRIIIPSLEKFEPELIIVACGYDANALDPLARMQLHSDS 285
Query: 296 YSVMLKKLMDFAQ----GKIVLALEGGYNLGSISNSVLACMNVL 335
+ M + D A GK+V+ EGGY + LA M L
Sbjct: 286 FRAMTALVQDAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEQL 329
>gi|71026484|ref|XP_762912.1| hypothetical protein [Theileria parva strain Muguga]
gi|68349864|gb|EAN30629.1| hypothetical protein TP03_0788 [Theileria parva]
Length = 900
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 137/211 (64%), Gaps = 12/211 (5%)
Query: 133 LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNS 192
+ FA+VRPPGHHA PD+ MGFC+YNNVA+AA +L + + G+ ++ IVDWDVHHGN
Sbjct: 213 IRKGFALVRPPGHHATPDKMMGFCIYNNVAIAARYL---QHKFGLKRVAIVDWDVHHGNG 269
Query: 193 TQKMFWKDPRVLFFSVHRH--EFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDA 250
TQ +F+ D V F S+HR+ + +FYP G+ IG G G YN+N+P E +A
Sbjct: 270 TQDIFYDDNSVCFISLHRYGTDEDSFYPYT--GYCDEIGVGKGSKYNVNIPLEKS-FTNA 326
Query: 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ-- 308
D + ++ +++PV + F P+ I++SAGFD+ GD LGGCR+ G+S KL + A+
Sbjct: 327 DLVHSFNKVVIPVLELFEPEFILVSAGFDSGRGDLLGGCRLDWEGFSWATFKLCELAEKY 386
Query: 309 --GKIVLALEGGYNLGSISNSVLACMNVLLE 337
G+++L+LEGGY L +S V A + L++
Sbjct: 387 SKGRLLLSLEGGYTLSRLSQDVEAVIATLVK 417
>gi|359395499|ref|ZP_09188551.1| hypothetical protein KUC_2156 [Halomonas boliviensis LC1]
gi|357969764|gb|EHJ92211.1| hypothetical protein KUC_2156 [Halomonas boliviensis LC1]
Length = 362
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/306 (40%), Positives = 168/306 (54%), Gaps = 22/306 (7%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
+PE+P R+ AI L+ I + K A + L VHT ++++ I F R
Sbjct: 45 YPEHPGRLIAIQQLLEKTPI-AGLHIEGGKAATHEQLARVHTTSYLSDI-------FSLR 96
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
+++ ++ GS +AA +AAG+ I E V + SAFA+VRPPGHHAEP A
Sbjct: 97 GKNAWLDVDTTAVSPGSIDAAEVAAGTAIAAVEAVVDKRAKSAFALVRPPGHHAEPVRAR 156
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL+NNVAVAA+ + R LG ++LIVDWD HHGN TQ +FW +P V+FF +HR
Sbjct: 157 GFCLFNNVAVAAA---HARSALGCERVLIVDWDAHHGNGTQDIFWAEPDVMFFDIHRA-- 211
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
FYP + G +G G G INVP G GD YL + IL P A F PDII+
Sbjct: 212 APFYPGS--GHLEEVGAGLAEGTTINVPLPAG-AGDEAYLKAFRDILAPAAAWFKPDIIL 268
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQ----GKIVLALEGGYNLGSISNSVL 329
+SAGFD D V+ G+ + + A+ G++V LEGGYNL S++N
Sbjct: 269 VSAGFDPHWHDL--ALNVSYEGFGALTGFMQQLAEQHCDGRLVFVLEGGYNLESLANGTR 326
Query: 330 ACMNVL 335
A + VL
Sbjct: 327 AVLAVL 332
>gi|145534692|ref|XP_001453090.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420790|emb|CAK85693.1| unnamed protein product [Paramecium tetraurelia]
Length = 641
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 185/369 (50%), Gaps = 22/369 (5%)
Query: 15 VGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQ-------AAGIPQRCVVLNAKEAKD 67
G +Y E KH + H ENP R ++I +Q A ++ N E +
Sbjct: 18 TGFIYCEDFDKHFS--NKKHFENPKRTQSIDQTIQNYLYQHDARKKVEQLSQFNQCEIE- 74
Query: 68 KNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAER 127
L V+ + +++ ++ + + D + + L+ YL + S+ A +V+E ++
Sbjct: 75 -YLRLVYDQAYIDFVEGLFEEVGDQKNQKEVVHLSDTYLCKTSAFTARKCVQAVLEGVDK 133
Query: 128 VAEGELNSAFAIVRPPGHHA-EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWD 186
+ E +AF VRPPGHH+ + GFC+YNNVA+AA + R + +NKI+I DWD
Sbjct: 134 ILTKEWRNAFCSVRPPGHHSGHKAQPTGFCIYNNVAIAAKY---ARLKHKVNKIVIFDWD 190
Query: 187 VHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPW---E 243
VHH + T+ +F++DP L S+HR++ G FYP + D IG N+NV W +
Sbjct: 191 VHHCDGTEFVFYEDPNTLVISIHRYDQGNFYPRSGDP--EKIGGKNAEFKNVNVGWNVTD 248
Query: 244 NGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKL 303
G DY+ +D +L P+ K+F PD IIISAG+D+A GDPLG TP GY M +KL
Sbjct: 249 GPAPGYDDYVYAFDRLLGPIIKEFAPDFIIISAGYDSAKGDPLGCIDNTPQGYQYMTEKL 308
Query: 304 MDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKK 363
K++ LEGGYNL + LA + L+ P + P + + K
Sbjct: 309 SQIC-PKVLAVLEGGYNLDVTAECALATLQQLM-GLPQDFPATIEPTKCGVSAVTTTVDK 366
Query: 364 LSAFWPTLA 372
FW L
Sbjct: 367 HKEFWTCLT 375
>gi|126178544|ref|YP_001046509.1| histone deacetylase superfamily protein [Methanoculleus marisnigri
JR1]
gi|125861338|gb|ABN56527.1| histone deacetylase superfamily [Methanoculleus marisnigri JR1]
Length = 330
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 160/298 (53%), Gaps = 24/298 (8%)
Query: 23 MCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLI 82
H+ P HPE+ R+ A AG+P + + A +L VHTE H+ +
Sbjct: 11 FSAHDAPG---HPESQARLDAAL-----AGVPADARRIAPERATVDDLALVHTERHIEGV 62
Query: 83 KNISSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRP 142
++ ++ R R Y+ GS +AA A G+ + ER +GE +FA+VRP
Sbjct: 63 RSFC-RECPPGRARYLDP--DTYVTAGSFDAALYATGAAWQAVERALDGE--HSFALVRP 117
Query: 143 PGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPR 202
PGHHA PD AMGFCL+NNVAVA + L L I ++ +VDWD+HHGN T++ F+ R
Sbjct: 118 PGHHAAPDRAMGFCLFNNVAVATAKAL-----LSIGRVAVVDWDLHHGNGTEEAFYTSDR 172
Query: 203 VLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLP 262
V + SVH+ +P G+ G GPG GY +NVP +G G ADY V+ + +P
Sbjct: 173 VFYCSVHQ---AGIFPGT--GWPEERGAGPGAGYTVNVPLVSGSTG-ADYALVFSRVFVP 226
Query: 263 VAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYN 320
+ + F PD++++SAG DA DPLG + P + + L+D + L LEGGY
Sbjct: 227 MLRWFEPDVVVVSAGQDALFDDPLGSLLLLPEDFGALAGMLVDATPAPLALVLEGGYG 284
>gi|344940653|ref|ZP_08779941.1| histone deacetylase superfamily [Methylobacter tundripaludum SV96]
gi|344261845|gb|EGW22116.1| histone deacetylase superfamily [Methylobacter tundripaludum SV96]
Length = 310
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 176/314 (56%), Gaps = 34/314 (10%)
Query: 34 HPENPNRIKAIWNKLQA---AGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF 90
HPE P+R+++I L A +G+ ++ L ++ + +H + H++ I +Q
Sbjct: 20 HPECPDRLRSIEKALSAPEFSGLIRQSPPLGT----ERQIRLIHPQFHIDAILEAIPEQG 75
Query: 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD 150
+ D + L+ GS +AA+ A G+V + ++V G+ ++AF VRPPGHHAEP
Sbjct: 76 EHYLD------HDTVLSPGSKQAAFRAVGAVCDAVDKVLTGKADNAFCAVRPPGHHAEPQ 129
Query: 151 EAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHR 210
AMGFCL+NN+A+AA++ R + + +I IVD+DVHHGN TQ F+ P VL+ S H
Sbjct: 130 LAMGFCLFNNIAIAANY---ARQQYQLERIAIVDFDVHHGNGTQAAFYNQPNVLYASSHE 186
Query: 211 --HEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFG 268
H GT +PA G+G INVP G G ++ + HI+LP K F
Sbjct: 187 MPHYPGTGHPAET-----------GVGNIINVPLAAGDSG-IEFRQKYAHIILPALKIFK 234
Query: 269 PDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGSI 324
P+++++SAGFDA DPL + + + ++LM A +G+++ ALEGGYNL ++
Sbjct: 235 PELLLVSAGFDAHKDDPLASIMLVEDDFKWVTQELMSVADHCCKGRVISALEGGYNLKAL 294
Query: 325 SNSVLACMNVLLED 338
+ SV + L+ D
Sbjct: 295 AASVAIHIKTLMTD 308
>gi|358336111|dbj|GAA54666.1| histone deacetylase 9 [Clonorchis sinensis]
Length = 1221
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 153/246 (62%), Gaps = 12/246 (4%)
Query: 102 NSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNV 161
++++ ++ AA LA G V+ +A +VA+ E+ + FA+VRPPGHHAEP +AMGFC +N+V
Sbjct: 856 DTVWNPSSTARAARLAVGQVLCLATKVAKNEIRNGFALVRPPGHHAEPGQAMGFCYFNSV 915
Query: 162 AVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPAND 221
A+ A LL R +L ++++LI+DWD+HHGN T+ + P +L+ S+HR++ G F+P
Sbjct: 916 AITALRLL--RSQL-VSRVLILDWDIHHGNGTKLAALQHPGLLYISIHRYDGGKFFPGT- 971
Query: 222 DGFYTMIGEGPGLGYNINVPWENGR----CGDADYLAVWDHILLPVAKDFGPDIIIISAG 277
G G P + + P R DA+YLA +++P+ +F PD+I+ISAG
Sbjct: 972 -GAANEAGSNPERPHATD-PITPHRPLLGLSDAEYLAAMRCVVIPIGHEFKPDVILISAG 1029
Query: 278 FDAAA--GDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVL 335
FDAA G+ LGG V+P ++ + ++ M A ++VLALEGGY +S + C+N L
Sbjct: 1030 FDAARGHGEALGGYSVSPGLFAWITRQCMSLANSRVVLALEGGYQPVVVSECITNCLNAL 1089
Query: 336 LEDKPV 341
L +P
Sbjct: 1090 LLPEPA 1095
>gi|283779728|ref|YP_003370483.1| histone deacetylase superfamily protein [Pirellula staleyi DSM
6068]
gi|283438181|gb|ADB16623.1| histone deacetylase superfamily [Pirellula staleyi DSM 6068]
Length = 310
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 174/309 (56%), Gaps = 20/309 (6%)
Query: 34 HPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFDSR 93
HPE+P R+ AI ++ A+ +P RC + K+A L VH +++ I+ ++ +
Sbjct: 18 HPEHPRRLVAIEERIDASPLPARCTLPIWKQATIDQLARVHDPLYIDEIRKFAA----AG 73
Query: 94 RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAM 153
RI + L+ S +AA LA+G+ ERV GE +AF + RPPGHHA P +AM
Sbjct: 74 GGRIEA---DTVLSPRSYDAAILASGAACNAVERVIAGEEKNAFLLHRPPGHHALPHDAM 130
Query: 154 GFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEF 213
GFCL+N+VAVAA+ L+ +LG+N++LIVDWDVHHGN TQ MF+ RV FFS HR
Sbjct: 131 GFCLFNHVAVAAAHALD---QLGLNRVLIVDWDVHHGNGTQDMFYTSDRVAFFSSHR--- 184
Query: 214 GTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIII 273
FYP G G GLG+N N+P E G ++LA + L A P++++
Sbjct: 185 WPFYPGT--GAADETGTRDGLGFNKNLPLEFG-IDPREFLAQFAGELQAFADRVKPELVL 241
Query: 274 ISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDF----AQGKIVLALEGGYNLGSISNSVL 329
ISAGFDA DP+G + + + + + AQG++V LEGGYN ++ SV
Sbjct: 242 ISAGFDAHRDDPIGSLSLEAEHFGELTRIVKQIAAVHAQGRVVSLLEGGYNPAKLAESVE 301
Query: 330 ACMNVLLED 338
+ LL +
Sbjct: 302 VHLAELLAE 310
>gi|335310624|ref|XP_003362118.1| PREDICTED: histone deacetylase 10-like [Sus scrofa]
Length = 571
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 176/324 (54%), Gaps = 38/324 (11%)
Query: 57 CVVLNAKEAKDKNL-LSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNEGSSEAAY 115
C+ L A+EA + L L++ TE L S+QFD+ +Y + + A
Sbjct: 17 CLRLVAREASEAELGLALSTEELQAL-----SRQFDA-----------VYFHPSTFHCAR 60
Query: 116 LAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPEL 175
LAAG+ +++ + V G + + A+VRPPGHH++ A GFC++N+VA+AA + + +
Sbjct: 61 LAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAK---HAQQKH 117
Query: 176 GINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLG 235
G+++ILIVDWD+HHG TQ +F DP VL+FS HR+E G F+P + +G G GLG
Sbjct: 118 GLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLG 177
Query: 236 YNINVPWENGRCGDADYL-AVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPY 294
+ +N+PW G+ADY+ A +LLP+A +F +++++SAGFD+A GD G + TP
Sbjct: 178 FTVNLPWNQVGMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPE 237
Query: 295 GYSVMLKKLMDFAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGSSEAYPFESTW 354
++ + + L A G++ LE V+ + AG E
Sbjct: 238 CFAHLTQLLQVLAGGRVCAVLE-----------------VIAAGREDAGPEAEGQREGAL 280
Query: 355 RVIQAVRKKLSAFWPTLADELPTK 378
+ IQ+VR + W +L + T+
Sbjct: 281 QSIQSVRAAQAPHWMSLRQQGRTR 304
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,941,823,347
Number of Sequences: 23463169
Number of extensions: 488691234
Number of successful extensions: 1031340
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3945
Number of HSP's successfully gapped in prelim test: 2330
Number of HSP's that attempted gapping in prelim test: 1007424
Number of HSP's gapped (non-prelim): 7444
length of query: 646
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 497
effective length of database: 8,863,183,186
effective search space: 4405002043442
effective search space used: 4405002043442
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)