Query 006415
Match_columns 646
No_of_seqs 270 out of 1612
Neff 5.7
Searched_HMMs 29240
Date Tue Mar 26 00:27:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006415.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006415hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pqp_A HD7A, histone deacetyla 100.0 9.2E-91 3.1E-95 750.1 34.4 355 13-373 36-418 (421)
2 2vqm_A HD4, histone deacetylas 100.0 9.2E-90 3.1E-94 747.8 31.1 360 9-373 4-389 (413)
3 1zz1_A Histone deacetylase-lik 100.0 2.6E-86 8.9E-91 711.1 34.5 340 13-368 1-365 (369)
4 4a69_A Histone deacetylase 3,; 100.0 5.8E-86 2E-90 708.2 36.5 367 12-423 2-376 (376)
5 3max_A HD2, histone deacetylas 100.0 1.9E-84 6.7E-89 693.5 36.9 358 12-416 2-367 (367)
6 3ew8_A HD8, histone deacetylas 100.0 1E-84 3.6E-89 698.7 33.3 364 9-420 10-380 (388)
7 3q9b_A Acetylpolyamine amidohy 100.0 5.7E-82 1.9E-86 668.7 28.9 309 16-337 2-341 (341)
8 3men_A Acetylpolyamine aminohy 100.0 1.2E-81 4.1E-86 669.8 30.4 309 14-337 21-359 (362)
9 1c3p_A Protein (HDLP (histone 100.0 2.2E-81 7.4E-86 674.2 31.6 313 13-341 2-319 (375)
10 2qik_A UPF0131 protein YKQA; N 99.6 7.7E-15 2.6E-19 152.4 11.6 140 436-636 124-266 (285)
11 3cry_A Gamma-glutamyl cyclotra 99.6 9E-15 3.1E-19 143.0 11.2 143 438-641 15-163 (188)
12 2g0q_A AT5G39720.1 protein; st 96.0 0.014 5E-07 55.9 7.7 76 438-539 16-92 (173)
13 2jqv_A AT3G28950, AIG2 protein 95.1 0.019 6.5E-07 54.4 4.8 76 438-539 7-83 (165)
14 1vkb_A Hypothetical protein; g 90.6 0.13 4.4E-06 48.8 2.9 129 442-629 16-153 (161)
15 1xhs_A Hypothetical UPF0131 pr 64.3 4.3 0.00015 36.3 3.2 69 441-539 2-71 (121)
16 1v30_A Hypothetical UPF0131 pr 63.8 4.3 0.00015 36.5 3.1 70 439-538 7-76 (124)
17 4hf7_A Putative acylhydrolase; 42.4 29 0.001 32.5 5.3 70 238-314 54-124 (209)
18 4h08_A Putative hydrolase; GDS 41.0 89 0.003 28.5 8.4 56 239-307 50-109 (200)
19 1ivn_A Thioesterase I; hydrola 40.5 43 0.0015 30.4 6.0 45 262-314 56-105 (190)
20 3jud_A AIG2-like domain-contai 37.5 1.3E+02 0.0046 27.6 8.9 79 442-539 4-83 (153)
21 3hp4_A GDSL-esterase; psychrot 35.5 27 0.00092 31.5 3.7 28 250-281 52-80 (185)
22 3p94_A GDSL-like lipase; serin 31.8 33 0.0011 31.3 3.7 67 237-314 49-120 (204)
23 3dff_A Teicoplanin pseudoaglyc 29.8 45 0.0015 33.6 4.5 34 251-284 131-164 (273)
24 2vpt_A Lipolytic enzyme; ester 28.7 53 0.0018 30.6 4.6 51 250-309 69-120 (215)
25 3dfi_A Pseudoaglycone deacetyl 28.2 52 0.0018 33.0 4.7 34 251-284 128-161 (270)
26 2qik_A UPF0131 protein YKQA; N 27.3 57 0.0019 33.0 4.8 63 441-529 4-66 (285)
27 2q0q_A ARYL esterase; SGNH hyd 25.5 70 0.0024 29.3 4.8 41 262-307 76-122 (216)
28 3bzw_A Putative lipase; protei 23.4 1.5E+02 0.0051 28.7 7.0 37 250-288 72-109 (274)
29 3dci_A Arylesterase; SGNH_hydr 22.5 1.3E+02 0.0044 28.3 6.1 41 261-306 93-139 (232)
30 1ans_A Neurotoxin III; NMR {An 21.9 48 0.0016 21.9 1.9 21 456-477 6-26 (27)
31 1mio_B Nitrogenase molybdenum 21.1 1.6E+02 0.0054 31.7 7.1 73 255-337 83-163 (458)
No 1
>2pqp_A HD7A, histone deacetylase 7A; HDAC, structural genomics, structural genomics consortium, SGC; HET: TSN; 1.80A {Homo sapiens} PDB: 2pqo_A* 2nvr_A 3c0y_A 3c0z_A 3c10_A* 2vqm_A* 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A*
Probab=100.00 E-value=9.2e-91 Score=750.07 Aligned_cols=355 Identities=42% Similarity=0.755 Sum_probs=316.4
Q ss_pred CeEEEEecccccccCCC--CCCCCCCChHHHHHHHHHHHHcCCCCcceEecCCCCCHHHHhccCCHHHHHHHHHhcc--c
Q 006415 13 RRVGLLYDERMCKHNTP--DGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS--K 88 (646)
Q Consensus 13 ~~~~lvyd~~~~~H~~~--~~~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~A~~~eL~~VHs~~YI~~l~~~~~--~ 88 (646)
++|++|||++|++|++. .+..|||+|+|++.|+++|++.|+.+.+++++|++|++++|++||+++||+.+..... .
T Consensus 36 ~~t~~vyd~~~l~H~~~~~~~~~HPE~P~Rl~~i~~~L~~~Gl~~~~~~~~p~~At~eeL~~vHs~~YI~~~~~~~l~~~ 115 (421)
T 2pqp_A 36 FTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRL 115 (421)
T ss_dssp TCEEEECCGGGGGCCCTTCCTTSCSSCTHHHHHHHHHHHHTTCGGGSEEECCCCCCHHHHTTTSCHHHHHHHHCCTTCSC
T ss_pred CeEEEEECHHHHhhccCCCCCCCCCCCcHHHHHHHHHHHhcCCcccCeeeCCCCCCHHHHHhcCCHHHHHhhhcchhhhh
Confidence 68999999999999954 3567999999999999999999999999999999999999999999999986532110 0
Q ss_pred ch------hh--hh-------hhhccccCceecc-cChHHHHHHHHhHHHHHHHHHHccccceeEEeeCCCCCCCCCCCC
Q 006415 89 QF------DS--RR-------DRIASKLNSIYLN-EGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEA 152 (646)
Q Consensus 89 ~~------~~--~~-------~~~~~~~~~~y~~-~~s~eaA~lAaG~~l~aad~v~~g~~~~afalvRPPGHHA~~~~a 152 (646)
.. .. .+ .++ ....|++++ .+|+++|++|+|++++|+++|++|+++||||++|||||||+++++
T Consensus 116 ~~~~~~~~g~~~~~~~~~~p~gg~-~~D~Dt~~~~~~s~~aa~~aaG~~~~a~~~v~~g~~~~afa~~rPpGHHA~~~~a 194 (421)
T 2pqp_A 116 KLDNGKLAGLLAQRMFVMLPCGGV-GVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTA 194 (421)
T ss_dssp CCCHHHHHHHHSCCCCEECTTSCE-ESSSSCEECTTTHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCSSCCTTCBTTBC
T ss_pred hhhcccccccchhhhhhhccccCc-CCCCCcccCCccHHHHHHHHHhHHHHHHHHHHcCccccceeeCCCCCCCCCCCCC
Confidence 00 00 00 001 112356666 599999999999999999999999999999999999999999999
Q ss_pred cceeeeCcHHHHHHHHHhhCCcCCcceEEEEEeecccCCccccccccCCceEEEecccCCCCCCCCCCCCCCCccccCCC
Q 006415 153 MGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGP 232 (646)
Q Consensus 153 ~GFC~fNnvAIAA~~l~~~~~~~g~~RVlIVD~DvHHGNGTq~iF~~Dp~VL~iSiH~~~~g~fyPgt~~G~~~eiG~g~ 232 (646)
+|||+||||||||++|+++ +|++||+|||||||||||||+|||+||+|||||||++++|.|||+| |..+|+|.|.
T Consensus 195 ~GFC~fNnvAiAa~~l~~~---~~~~RV~ivD~DvHHGnGtq~iF~~dp~Vl~~S~H~~~~g~~yPgt--G~~~e~G~g~ 269 (421)
T 2pqp_A 195 MGFCFFNSVAIACRQLQQQ---SKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGS 269 (421)
T ss_dssp BTTBSSCHHHHHHHHHHHH---STTCCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGTSTTCC--CCTTCCCCGG
T ss_pred CcchhhCHHHHHHHHHHHh---cCCCeEEEEecCCCCChhHHHHhcCCCCEEEEecccCCCCCCCCCC--CChhhccCCC
Confidence 9999999999999999975 4799999999999999999999999999999999999878899986 8999999999
Q ss_pred CccceEeeeCCCC---CCCchhHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCCC--CCCCcccChhhHHHHHHHHHhcc
Q 006415 233 GLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD--PLGGCRVTPYGYSVMLKKLMDFA 307 (646)
Q Consensus 233 G~G~~iNVPLp~g---~~gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~D--pLG~~~lt~~gy~~l~~~l~~~a 307 (646)
|+||+|||||+.| +++|++|+.+|+++|+|++++|+||+||||||||+|.+| |||+|+||+++|.+++++|+++|
T Consensus 270 g~g~~vNvPl~~gl~~g~~d~~yl~~~~~~l~p~~~~F~PdlIvvsaG~Da~~gD~dpLg~~~lt~~~y~~~~~~l~~~a 349 (421)
T 2pqp_A 270 GEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLA 349 (421)
T ss_dssp GTTCEEEEEECSCSSSCCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCCGGGCCCBBCHHHHHHHHHHHTTSG
T ss_pred CccceeccccCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeCCcccccccccccCCceeCHHHHHHHHHHHHHHc
Confidence 9999999999854 279999999999999999999999999999999999987 99999999999999999999999
Q ss_pred CCcEEEEeCCCCCcchHHHHHHHHHHHHcCCCCCCCC---CCCCCChhHHHHHHHHHHHHhcccchhhc
Q 006415 308 QGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS---SEAYPFESTWRVIQAVRKKLSAFWPTLAD 373 (646)
Q Consensus 308 ~grvv~vleGGY~~~~la~~~~~~~~~Llg~~~~~~~---~~~~p~~~~~~~i~~~~~~~~~~w~~l~~ 373 (646)
+||+|++|||||+++++++++.+++++|+|.++.+.. ....|.+++.++|++|++++++||+||+.
T Consensus 350 ~grvv~vlEGGY~l~~l~~~~~a~~~~L~g~~~~~l~~~~~~~~p~~~a~~~i~~v~~~~~~yW~~l~~ 418 (421)
T 2pqp_A 350 GGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKYWGCMQR 418 (421)
T ss_dssp GGCEEEEECSCCCHHHHHHHHHHHHHHHTTCCCCGGGCGGGGSCCCHHHHHHHHHHHHHHTTTCGGGCC
T ss_pred CCCEEEEECCCCChHHHHHHHHHHHHHHcCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhHHHHh
Confidence 9999999999999999999999999999998754321 23468889999999999999999999964
No 2
>2vqm_A HD4, histone deacetylase 4; inhibitor, repressor, chromatin, coiled coil, transcription regulation, UBL conjugation, chromatin regulator; HET: HA3; 1.8A {Homo sapiens} PDB: 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A* 3c10_A* 3c0z_A 3c0y_A*
Probab=100.00 E-value=9.2e-90 Score=747.77 Aligned_cols=360 Identities=40% Similarity=0.746 Sum_probs=313.9
Q ss_pred CCCCCeEEEEecccccccCCCCC--CCCCCChHHHHHHHHHHHHcCCCCcceEecCCCCCHHHHhccCCHHHHHHHHHhc
Q 006415 9 RTIKRRVGLLYDERMCKHNTPDG--DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNIS 86 (646)
Q Consensus 9 ~~~~~~~~lvyd~~~~~H~~~~~--~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~A~~~eL~~VHs~~YI~~l~~~~ 86 (646)
.+.+|+|++|||++|++|+++.+ ..|||+|+|++.|+++|++.|+.+++++++|++|+.++|++||+++||+.++...
T Consensus 4 ~~p~~~Tg~vyd~~~l~H~~~~g~~~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~At~eeL~~vHs~~Yv~~~~~~~ 83 (413)
T 2vqm_A 4 TKPRFTTGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNP 83 (413)
T ss_dssp --CCSSEEEECCGGGCSCCCTTC-------CCCHHHHHHHHHHHHTHHHHSEEECCCCCCHHHHTTTSCHHHHHHHHSCG
T ss_pred CCCCCeEEEEEcHHHhccCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCeEeCCCCCCHHHHHHhCCHHHHHHHhcCc
Confidence 45668999999999999998754 5799999999999999999999999999999999999999999999998876532
Q ss_pred ccchhhhh----------------hhhccccCceecccChHHHHHHHHhHHHHHHHHHHccccceeEEeeCCCCCCCCCC
Q 006415 87 SKQFDSRR----------------DRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPD 150 (646)
Q Consensus 87 ~~~~~~~~----------------~~~~~~~~~~y~~~~s~eaA~lAaG~~l~aad~v~~g~~~~afalvRPPGHHA~~~ 150 (646)
........ .....+.+.+|...+|+++|++|+|++++|+++|++|+++||||++|||||||+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~dt~~~~~~s~~aA~laaG~~l~a~~~v~~g~~~~afa~vrppGHHA~~~ 163 (413)
T 2vqm_A 84 LNRQKLDSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEES 163 (413)
T ss_dssp GGGCC----HHHHHHHHHEEECTTSCEEECTTSTHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCCSCCTTCBTT
T ss_pred hhhhHhhhhhhccchhhhhhccccCCcCccCCccccchhHHHHHHHHHHHHHHHHHHHhcCCccceeeecccccccCcCC
Confidence 21100000 00011123334445899999999999999999999999999999999999999999
Q ss_pred CCcceeeeCcHHHHHHHHHhhCCcCCcceEEEEEeecccCCccccccccCCceEEEecccCCCCCCCCCCCCCCCccccC
Q 006415 151 EAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGE 230 (646)
Q Consensus 151 ~a~GFC~fNnvAIAA~~l~~~~~~~g~~RVlIVD~DvHHGNGTq~iF~~Dp~VL~iSiH~~~~g~fyPgt~~G~~~eiG~ 230 (646)
+++|||+||||||||++|++. +|++||||||||||||||||+|||+||+|||+|+|+++++.|||+| |+.+|+|.
T Consensus 164 ~a~GFC~~Nnvaiaa~~~~~~---~~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~f~pgt--G~~~e~G~ 238 (413)
T 2vqm_A 164 TPMGFCYFNSVAVAAKLLQQR---LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGT 238 (413)
T ss_dssp BCBTTBSSCHHHHHHHHHHHH---SCCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGCSTTCC--CCTTCCCS
T ss_pred CCCCccccchHHHHHHHHHHh---cCCCeEEEEecccCCCccHHHHHhcCcccccccchhccCCCCCCCC--CCHHHcCC
Confidence 999999999999999999886 4799999999999999999999999999999999999888999986 89999999
Q ss_pred CCCccceEeeeCCCC---CCCchhHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCC--CCCCCcccChhhHHHHHHHHHh
Q 006415 231 GPGLGYNINVPWENG---RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAG--DPLGGCRVTPYGYSVMLKKLMD 305 (646)
Q Consensus 231 g~G~G~~iNVPLp~g---~~gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~--DpLG~~~lt~~gy~~l~~~l~~ 305 (646)
|+|+|+|+||||+.| +++|++|+.+|+++|+|++++|+||+||||||||+|.+ ||||+|+||+++|.+++++|++
T Consensus 239 g~g~g~~~n~pl~~g~~~~~~D~~y~~~~~~~v~p~~~~f~PdlivvsaG~Da~~~d~D~lg~~~lt~~~~~~~~~~l~~ 318 (413)
T 2vqm_A 239 GPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMG 318 (413)
T ss_dssp GGGTTCEEEEEECSCSSSCCCHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBSSCTTTTCCCCBCHHHHHHHHHHHHT
T ss_pred CcccccccccccccccCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcCCCCCCCCCcccCHHHHHHHHHHHHH
Confidence 999999999999843 38899999999999999999999999999999999998 5699999999999999999999
Q ss_pred ccCCcEEEEeCCCCCcchHHHHHHHHHHHHcCCCCCCCC---CCCCCChhHHHHHHHHHHHHhcccchhhc
Q 006415 306 FAQGKIVLALEGGYNLGSISNSVLACMNVLLEDKPVAGS---SEAYPFESTWRVIQAVRKKLSAFWPTLAD 373 (646)
Q Consensus 306 ~a~grvv~vleGGY~~~~la~~~~~~~~~Llg~~~~~~~---~~~~p~~~~~~~i~~~~~~~~~~w~~l~~ 373 (646)
+|++|+|++|||||+++++++||.+++++|+|.+..+.. ....|+.++.+.|+++++.+++||++|++
T Consensus 319 ~a~~~~v~vleGGY~~~~l~~~~~~~~~~l~g~~~~~~p~~~~~~~p~~~~~~~~~~v~~~~~~~W~~l~~ 389 (413)
T 2vqm_A 319 LAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVMEIHSKYWRCLQR 389 (413)
T ss_dssp SGGGCEEEEECCCCCHHHHHHHHHHHHHHHTTCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHTTCGGGTS
T ss_pred hcCCCEEEEeCcCCChHHHHHHHHHHHHHHcCCCCCCCChhhhhcCCChHHHHHHHHHHHHHHHHhhhhhc
Confidence 999999999999999999999999999999997653321 12467889999999999999999999975
No 3
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A*
Probab=100.00 E-value=2.6e-86 Score=711.06 Aligned_cols=340 Identities=34% Similarity=0.604 Sum_probs=303.5
Q ss_pred CeEEEEecccccccCCCCC--------------CCCCCChHHHHHHHHHHHHcCCCCcceEecCCCCCHHHHhccCCHHH
Q 006415 13 RRVGLLYDERMCKHNTPDG--------------DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENH 78 (646)
Q Consensus 13 ~~~~lvyd~~~~~H~~~~~--------------~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~A~~~eL~~VHs~~Y 78 (646)
|+|+++|||+|+.|.++.+ ..|||+|+|++.+++.|++.|+.+.+.+++|++|++++|++||+++|
T Consensus 1 m~t~~~y~~~~~~h~~~~~~~~~~~~g~~~~~~~~Hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~~~l~~vH~~~Y 80 (369)
T 1zz1_A 1 MAIGYVWNTLYGWVDTGTGSLAAANLTARMQPISHHLAHPDTKRRFHELVCASGQIEHLTPIAAVAATDADILRAHSAAH 80 (369)
T ss_dssp -CEEEECCGGGGGCCCCSSSSSCCBTTTTBCCCSSCTTCTHHHHHHHHHHHHTTGGGGSEECCCCCCCHHHHHTTSCHHH
T ss_pred CeEEEEEchHHcccCCCCcccccccccccccccCCCCCCHHHHHHHHHHHHhcCCCccceEeCCCcCCHHHHHHhccHHH
Confidence 5799999999999998643 11999999999999999999999989999999999999999999999
Q ss_pred HHHHHHhcc-cchhhhhhhhccccCceecccChHHHHHHHHhHHHHHHHHHHccccceeEEeeCCCCCCCCCCCCcceee
Q 006415 79 VNLIKNISS-KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCL 157 (646)
Q Consensus 79 I~~l~~~~~-~~~~~~~~~~~~~~~~~y~~~~s~eaA~lAaG~~l~aad~v~~g~~~~afalvRPPGHHA~~~~a~GFC~ 157 (646)
|++|++.+. ... ..+ ..+||+++++++++|++++|+++.|+++|++|++++|||++|||||||++++++|||+
T Consensus 81 v~~l~~~~~~~~~----~~l--~~~dtp~~~~~~~~a~~aaG~~l~aa~~v~~g~~~~afa~~rppGHHA~~~~a~GFC~ 154 (369)
T 1zz1_A 81 LENMKRVSNLPTG----GDT--GDGITMMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPGHHAPHNAAMGFCI 154 (369)
T ss_dssp HHHHHHHHHSTTC----EEC--SSSSCEECTTTHHHHHHHHHHHHHHHHHHHTTSCSEEEECCSSCCTTCCTTCCBTTBS
T ss_pred HHHHHHhCccccc----eec--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHhCCCcceEEEecCCccCcCCCCCCCchH
Confidence 999998764 210 112 2338999999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHHhhCCcCCcceEEEEEeecccCCccccccccCCceEEEecccCCCCCCCC-CCCCCCCccccCCCCccc
Q 006415 158 YNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYP-ANDDGFYTMIGEGPGLGY 236 (646)
Q Consensus 158 fNnvAIAA~~l~~~~~~~g~~RVlIVD~DvHHGNGTq~iF~~Dp~VL~iSiH~~~~g~fyP-gt~~G~~~eiG~g~G~G~ 236 (646)
|||+||||++|+++ +|++||+|||||||||||||+|||+||+|||+|||+++ ||| +| |..+|+|.|+|+|+
T Consensus 155 fNnvAiAa~~l~~~---~g~~RV~IvD~DvHHGnGTq~iF~~d~~Vl~~SiH~~~---~yP~~t--G~~~e~G~g~g~g~ 226 (369)
T 1zz1_A 155 FNNTSVAAGYARAV---LGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQHL---CFPPDS--GYSTERGAGNGHGY 226 (369)
T ss_dssp SCHHHHHHHHHHHT---SCCSCEEEEECSSSCCHHHHHHTTTCTTEEEEEEEETT---SSSTTC--CCTTCCCCGGGTTC
T ss_pred hhHHHHHHHHHHHh---cCCCeEEEEecCCCCchhhhHHhcCCCCEEEEeccCCC---CCCCCC--CcccccCCCCCCce
Confidence 99999999999975 47999999999999999999999999999999999984 999 86 89999999999999
Q ss_pred eEeeeCCCCCCCchhHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccChhhHHHHHHHHHhcc----CCcEE
Q 006415 237 NINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIV 312 (646)
Q Consensus 237 ~iNVPLp~g~~gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~DpLG~~~lt~~gy~~l~~~l~~~a----~grvv 312 (646)
++|||||+| ++|++|+.+|+++|+|++++|+||+||||||||+|.+||||+|+||+++|.+++++|+++| ++|++
T Consensus 227 ~vNvPL~~g-~~d~~yl~~~~~~v~p~l~~f~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~~~~~~l~~~a~~~~~g~vv 305 (369)
T 1zz1_A 227 NINVPLPPG-SGNAAYLHAMDQVVLPALRAYRPQLIIVGSGFDASMLDPLARMMVTADGFRQMARRTIDCAADICDGRIV 305 (369)
T ss_dssp EEEEEECTT-CBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCTTCCCBBCHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred EEeeecCCC-CCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccCCCCCCCCCcccCHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 999999998 9999999999999999999999999999999999999999999999999999999999875 78999
Q ss_pred EEeCCCCCcchHHHHHHHHHHHHcCCCCCCCCCC-----CCCChhHHHHHHHHHHHHhccc
Q 006415 313 LALEGGYNLGSISNSVLACMNVLLEDKPVAGSSE-----AYPFESTWRVIQAVRKKLSAFW 368 (646)
Q Consensus 313 ~vleGGY~~~~la~~~~~~~~~Llg~~~~~~~~~-----~~p~~~~~~~i~~~~~~~~~~w 368 (646)
++|||||++++++++|.+++++|+|.+. ...|. ..|.++..+.++++++.+++.|
T Consensus 306 ~vleGGY~~~~l~~~~~~~~~~l~g~~~-~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 365 (369)
T 1zz1_A 306 FVQEGGYSPHYLPFCGLAVIEELTGVRS-LPDPYHEFLAGMGGNTLLDAERAAIEEIVPLL 365 (369)
T ss_dssp EEECCCCCTTTHHHHHHHHHHHHHCCCC-CCCTTHHHHHTTCCCSCCHHHHHHHHTTGGGG
T ss_pred EEECCCCCccHHHHHHHHHHHHHhCCCC-CCCchhHHHhhccccchHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999776 22221 1223333445555666666666
No 4
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.8e-86 Score=708.24 Aligned_cols=367 Identities=20% Similarity=0.362 Sum_probs=317.9
Q ss_pred CCeEEEEecccccccCCCCCCCCCCChHHHHHHHHHHHHcCCCCcceEecCCCCCHHHHhccCCHHHHHHHHHhcccchh
Q 006415 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFD 91 (646)
Q Consensus 12 ~~~~~lvyd~~~~~H~~~~~~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~A~~~eL~~VHs~~YI~~l~~~~~~~~~ 91 (646)
+++|+++||++|+.|.++ ..|||+|+|++.|+++|++.|+.+.+++++|++|++++|++||+++||++|++.+.....
T Consensus 2 ~~~~~~~y~~~~~~~~~g--~~HPe~p~Rl~~i~~~l~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~ 79 (376)
T 4a69_A 2 AKTVAYFYDPDVGNFHYG--AGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQ 79 (376)
T ss_dssp CCCEEEECCTTTTCCCCC--TTCSCCTHHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHCCTTTGG
T ss_pred CCeEEEEEChHHhCcCCC--CCCCcCHHHHHHHHHHHHhcCCCCCceEeCCCCCCHHHHHHhCCHHHHHHHHHhCcccch
Confidence 358999999999999875 459999999999999999999999999999999999999999999999999987653211
Q ss_pred h---hhhhhccccCceecccChHHHHHHHHhHHHHHHHHHHccccceeEEeeCCCC-CCCCCCCCcceeeeCcHHHHHHH
Q 006415 92 S---RRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASF 167 (646)
Q Consensus 92 ~---~~~~~~~~~~~~y~~~~s~eaA~lAaG~~l~aad~v~~g~~~~afalvRPPG-HHA~~~~a~GFC~fNnvAIAA~~ 167 (646)
. ....+. ...|++++++++++|++++|+++.|+++|++|+.++||+ +||| |||++++++|||+|||+||||++
T Consensus 80 ~~~~~~~~~~-l~~Dtpv~~~~~e~a~~aaGgtl~Aa~~v~~g~~~~A~~--~~gG~HHA~~~~a~GFC~~NdvAiAa~~ 156 (376)
T 4a69_A 80 GFTKSLNAFN-VGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAIN--WAGGLHHAKKFEASGFCYVNDIVIGILE 156 (376)
T ss_dssp GGHHHHHHHT-CSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEE--TTCCCTTCBTTBCBTTBSSCHHHHHHHH
T ss_pred hhhhhhceec-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCcceeee--CCCCCCcCCcCCCCcchhhhHHHHHHHH
Confidence 1 011111 224789999999999999999999999999998876654 5555 99999999999999999999999
Q ss_pred HHhhCCcCCcceEEEEEeecccCCccccccccCCceEEEecccCCCCCCCCCCCCCCCccccCCCCccceEeeeCCCCCC
Q 006415 168 LLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247 (646)
Q Consensus 168 l~~~~~~~g~~RVlIVD~DvHHGNGTq~iF~~Dp~VL~iSiH~~~~g~fyPgt~~G~~~eiG~g~G~G~~iNVPLp~g~~ 247 (646)
|++. .+||||||||||||||||+|||+||+|||+|||+++. .|||+| |..+|+|.|+|+|+++|||||+| +
T Consensus 157 l~~~-----~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~-~~fPgt--G~~~e~G~g~g~g~~vNvPL~~G-~ 227 (376)
T 4a69_A 157 LLKY-----HPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGT--GDMYEVGAESGRYYCLNVPLRDG-I 227 (376)
T ss_dssp HTTT-----CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECST-TCTTCC--CCTTCCCCGGGTTSEEEEEECTT-C
T ss_pred HHHh-----CCcEEEEeccCCCCcchhhHhcCCCCEEEEecccCCC-cCCCCC--CCccccCCCCCCceeEeeecCCC-C
Confidence 9863 4899999999999999999999999999999999864 399986 89999999999999999999998 9
Q ss_pred CchhHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccChhhHHHHHHHHHhccCCcEEEEeCCCCCcchHHHH
Q 006415 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNS 327 (646)
Q Consensus 248 gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~DpLG~~~lt~~gy~~l~~~l~~~a~grvv~vleGGY~~~~la~~ 327 (646)
+|++|+.+|+++|.|++++|+||+||||||||+|.+||||+|+||++||.++++.++++ ++|+++++||||+++++++|
T Consensus 228 ~D~~yl~~~~~~l~p~~~~f~Pd~IvvsaG~Da~~~DpLg~l~Lt~~g~~~~~~~l~~~-~~p~v~v~eGGY~~~~var~ 306 (376)
T 4a69_A 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSF-NIPLLVLGGGGYTVRNVARC 306 (376)
T ss_dssp BHHHHHHHHHHHHHHHHHHHCCSEEEEECCGGGBTTCSSCCCBBCHHHHHHHHHHHHTT-CCCEEEECCCCCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccCCCCCcccCeecCHHHHHHHHHHHHHc-CCCEEEEECCCCChhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998 68999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCChhHHHHHHHHHHHHhcccchhhccccccccccCCCCCccccCCCChhhhhh----HH
Q 006415 328 VLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK----VE 403 (646)
Q Consensus 328 ~~~~~~~Llg~~~~~~~~~~~p~~~~~~~i~~~~~~~~~~w~~l~~~l~~~~~~~~~~~~~~~~~~~~~~e~~~----~~ 403 (646)
|..++..|+|.+.+...| .. .|++.+. |...|+....++++|.| ++
T Consensus 307 w~~~~a~l~g~~~~~~~P----~~--------------~~~~~~~------------p~~~l~~~~~~~~~~~n~~~~l~ 356 (376)
T 4a69_A 307 WTYETSLLVEEAISEELP----YS--------------EYFEYFA------------PDFTLHPDVSTRIENQNSRQYLD 356 (376)
T ss_dssp HHHHHHHHTTCCCCSBCC----CC--------------TTGGGGT------------TTCBSSCCCCCCSCCCCCHHHHH
T ss_pred HHHHHHHhcCCCccCCCC----Cc--------------hHHHHhC------------CCcccCCCCCCCCCCCCCHHHHH
Confidence 999999999976543322 21 3656553 44556665467788877 99
Q ss_pred HHHHHHHHHhhcccCCCCCc
Q 006415 404 TLEAVLQVALSKLKVDDGHA 423 (646)
Q Consensus 404 ~~~~~~~~~l~~l~~~~~~~ 423 (646)
.+++.|+|+|++|.++|+-|
T Consensus 357 ~~~~~~~~~l~~~~~~p~~~ 376 (376)
T 4a69_A 357 QIRQTIFENLKMLNHAPSVQ 376 (376)
T ss_dssp HHHHHHHHHHHTTC------
T ss_pred HHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999998754
No 5
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.9e-84 Score=693.45 Aligned_cols=358 Identities=23% Similarity=0.428 Sum_probs=316.3
Q ss_pred CCeEEEEecccccccCCCCCCCCCCChHHHHHHHHHHHHcCCCCcceEecCCCCCHHHHhccCCHHHHHHHHHhcccchh
Q 006415 12 KRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQFD 91 (646)
Q Consensus 12 ~~~~~lvyd~~~~~H~~~~~~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~A~~~eL~~VHs~~YI~~l~~~~~~~~~ 91 (646)
+++|+++||++|+.|+++ ..|||+|+|+++|++.|++.|+.+.+++++|++|+.++|++||+++||++|++.+.....
T Consensus 2 ~~~v~~~y~~~~~~~~~g--~~HPe~P~Rl~~i~~~L~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~ 79 (367)
T 3max_A 2 KKKVCYYYDGDIGNYYYG--QGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS 79 (367)
T ss_dssp CCCEEEECCGGGGGCCCC--TTCSCCTHHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHCCGGGGG
T ss_pred CCeEEEEECccccCcCCC--CCCCCCHHHHHHHHHHHHhcCCcccCeeeCCCCCCHHHHHhhCCHHHHHHHHHhCccccc
Confidence 468999999999999975 469999999999999999999999999999999999999999999999999987643211
Q ss_pred h---hhhhhccccCceecccChHHHHHHHHhHHHHHHHHHHccccceeEEeeCCCC-CCCCCCCCcceeeeCcHHHHHHH
Q 006415 92 S---RRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASF 167 (646)
Q Consensus 92 ~---~~~~~~~~~~~~y~~~~s~eaA~lAaG~~l~aad~v~~g~~~~afalvRPPG-HHA~~~~a~GFC~fNnvAIAA~~ 167 (646)
. ....+. ...|++++++++++|++++|+++.|+++|++|+ +++|++|||| |||++++++|||+|||+||||++
T Consensus 80 ~~~~~~~~~~-l~~Dtp~~~~~~e~a~~aaGgsl~aa~~v~~~~--~~~Ai~~pgG~HHA~~~~a~GFC~~NdvaiAa~~ 156 (367)
T 3max_A 80 EYSKQMQRFN-VGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ--TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILE 156 (367)
T ss_dssp GCHHHHHHTT-CSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTS--CSEEEETTCCCTTCBTTBCBTTBCSCHHHHHHHH
T ss_pred hhhhHhhhcC-CCCCCCCchHHHHHHHHHHHHHHHHHHHhcccC--cceEecCCCCCCcCCcCCCCCchhhhHHHHHHHH
Confidence 1 011111 125789999999999999999999999999886 4688999999 99999999999999999999999
Q ss_pred HHhhCCcCCcceEEEEEeecccCCccccccccCCceEEEecccCCCCCCCCCCCCCCCccccCCCCccceEeeeCCCCCC
Q 006415 168 LLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRC 247 (646)
Q Consensus 168 l~~~~~~~g~~RVlIVD~DvHHGNGTq~iF~~Dp~VL~iSiH~~~~g~fyPgt~~G~~~eiG~g~G~G~~iNVPLp~g~~ 247 (646)
|++. .+||+|||||||||||||+|||+||+|||+|||++ +.|||+| |..+++|.|+|+|+++|||||+| +
T Consensus 157 l~~~-----~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~--~~~fPgt--g~~~e~G~g~g~g~~vNvPL~~g-~ 226 (367)
T 3max_A 157 LLKY-----HQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNFPMRDG-I 226 (367)
T ss_dssp HTTT-----CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEEC--SSCTTCC--CCTTCCCCGGGTTCEEEEEECTT-C
T ss_pred HHHc-----CCcEEEEecCCCCCchhhHHhcCCCCEEEEecccC--CCCCCCC--CCccccCCCCCCceEEEEecCCC-C
Confidence 9763 48999999999999999999999999999999997 3699986 89999999999999999999998 9
Q ss_pred CchhHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccChhhHHHHHHHHHhccCCcEEEEeCCCCCcchHHHH
Q 006415 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNS 327 (646)
Q Consensus 248 gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~DpLG~~~lt~~gy~~l~~~l~~~a~grvv~vleGGY~~~~la~~ 327 (646)
+|++|+.+|+++|.|++++|+||+||||||||+|.+||||+|+||.+||.++++.++++ ++|+++++||||++.++++|
T Consensus 227 ~d~~y~~~~~~~~~~~~~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~g~~~~~~~~~~~-~~p~v~~~eGGY~~~~var~ 305 (367)
T 3max_A 227 DDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTF-NLPLLMLGGGGYTIRNVARC 305 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCSEEEEECCGGGBTTCSSCCCCBCHHHHHHHHHHHHTT-CCCEEEECCCCCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCEEEEECCccCcCCCCCCCeeeCHHHHHHHHHHHHhc-CCCEEEEeCCCCChhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 68999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCChhHHHHHHHHHHHHhcccchhhccccccccccCCCCCccccCCCChhhhhh----HH
Q 006415 328 VLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK----VE 403 (646)
Q Consensus 328 ~~~~~~~Llg~~~~~~~~~~~p~~~~~~~i~~~~~~~~~~w~~l~~~l~~~~~~~~~~~~~~~~~~~~~~e~~~----~~ 403 (646)
|..++..++|.+.+... |.. .||+.+. |...|+.+ .++++|.| |+
T Consensus 306 wt~~ta~~~~~~i~~~~----p~~--------------~~~~~~~------------p~~~l~~~-~~~~~~~n~~~~l~ 354 (367)
T 3max_A 306 WTYETAVALDCEIPNEL----PYN--------------DYFEYFG------------PDFKLHIS-PSNMTNQNTPEYME 354 (367)
T ss_dssp HHHHHHHHTTCCCCSBC----CCC--------------TTGGGGT------------TTCBSSCC-CCSCCCCCCHHHHH
T ss_pred HHHHHHHHhhcccccCC----Cch--------------hhHHhhC------------CCeeccCC-cccccCCCCHHHHH
Confidence 99999999997654332 221 4666663 34456663 56778877 99
Q ss_pred HHHHHHHHHhhcc
Q 006415 404 TLEAVLQVALSKL 416 (646)
Q Consensus 404 ~~~~~~~~~l~~l 416 (646)
.+++.++|+|++|
T Consensus 355 ~i~~~~~~~l~~~ 367 (367)
T 3max_A 355 KIKQRLFENLRML 367 (367)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999986
No 6
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=100.00 E-value=1e-84 Score=698.75 Aligned_cols=364 Identities=24% Similarity=0.387 Sum_probs=316.5
Q ss_pred CCCCCeEEEEecccccccCCCCCCCCCCChHHHHHHHHHHHHcCCCCcceEecCCCCCHHHHhccCCHHHHHHHHHhccc
Q 006415 9 RTIKRRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSK 88 (646)
Q Consensus 9 ~~~~~~~~lvyd~~~~~H~~~~~~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~A~~~eL~~VHs~~YI~~l~~~~~~ 88 (646)
..++++|+++||++|+.|. ..|||+|+|+++++++|++.|+.+.+.+++|++|+.++|++||+++||++|++.+..
T Consensus 10 ~~~~~~~~~~y~~~~~~~~----~~HPe~P~Rl~~i~~ll~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~ 85 (388)
T 3ew8_A 10 SGQSLVPVYIYSPEYVSMC----DSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE 85 (388)
T ss_dssp ----CCCEEECCHHHHHHH----TTCTTSTTHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEEChHHhccC----CCCCCCcHHHHHHHHHHHHcCCcccCeEeCCCCCCHHHHHhhCCHHHHHHHHHhccc
Confidence 3455789999999999885 249999999999999999999999999999999999999999999999999987643
Q ss_pred chhh--hhhhhccccCceecccChHHHHHHHHhHHHHHHHHHHccccceeEEeeCCCC-CCCCCCCCcceeeeCcHHHHH
Q 006415 89 QFDS--RRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAA 165 (646)
Q Consensus 89 ~~~~--~~~~~~~~~~~~y~~~~s~eaA~lAaG~~l~aad~v~~g~~~~afalvRPPG-HHA~~~~a~GFC~fNnvAIAA 165 (646)
.... ....+. ...|++++++++++|++++|+++.|+++|++|+.+ +|++|||| |||++++++|||+|||+||||
T Consensus 86 ~~~~~~~~~~~~-lg~Dtp~~~~~~e~a~~aaGgsl~Aa~~v~~g~~~--~Ai~~pGG~HHA~~~~a~GFC~~NdiaiAa 162 (388)
T 3ew8_A 86 GDDDHPDSIEYG-LGYLCPATEGIFDYAAAIGGATITAAQCLIDGMCK--VAINWSGGWHHAKKDEASGFCYLNDAVLGI 162 (388)
T ss_dssp C--------CCS-CSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCS--EEEETTCCCTTCBTTBCBTTBSSCHHHHHH
T ss_pred ccccchhhhhcc-CCCCCCCChhHHHHHHHHHHHHHHHHHHHHcCCCc--eeeecCCcccceeecCCCCchhhhHHHHHH
Confidence 2110 000111 12378999999999999999999999999999875 56789999 999999999999999999999
Q ss_pred HHHHhhCCcCCcceEEEEEeecccCCccccccccCCceEEEecccCCCCCCCCCCCCCCCccccCCCCccceEeeeCCCC
Q 006415 166 SFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENG 245 (646)
Q Consensus 166 ~~l~~~~~~~g~~RVlIVD~DvHHGNGTq~iF~~Dp~VL~iSiH~~~~g~fyPgt~~G~~~eiG~g~G~G~~iNVPLp~g 245 (646)
++|++ +.+||||||||||||||||+|||+||+|||+|||+++.+ |||+| |..+++|.|+|+||++|||||+|
T Consensus 163 ~~l~~-----~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~-~fPgt--G~~~e~G~g~g~g~~vNvPL~~G 234 (388)
T 3ew8_A 163 LRLRR-----KFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGT--GDVSDVGLGKGRYYSVNVPIQDG 234 (388)
T ss_dssp HHHTT-----TCSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECCTT-CTTCC--CCTTCCCCGGGTTSEEEEEECTT
T ss_pred HHHHh-----cCCeEEEEecCCCCChhHHHHhccCCCEEEEecCCCCCC-CCCCC--CCcccccCCCCcceeeeccCCCC
Confidence 99975 368999999999999999999999999999999998654 99986 89999999999999999999998
Q ss_pred CCCchhHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccChhhHHHHHHHHHhccCCcEEEEeCCCCCcchHH
Q 006415 246 RCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSIS 325 (646)
Q Consensus 246 ~~gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~DpLG~~~lt~~gy~~l~~~l~~~a~grvv~vleGGY~~~~la 325 (646)
++|++|+.+|+++|.|++++|+||+||||||||+|.+||||+|+||++||.++++.|+++ +.|+++++||||++.+++
T Consensus 235 -~~d~~y~~~~~~~l~p~~~~F~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~~~~~~l~~~-~~p~l~~~gGGY~~~~va 312 (388)
T 3ew8_A 235 -IQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQW-QLATLILGGGGYNLANTA 312 (388)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHCCSEEEEECCSTTBTTCTTCCCCBCHHHHHHHHHHHHTT-CCEEEEECCCCCSHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHhCCCEEEEECCccCCCCCCCCCCcCCHHHHHHHHHHHHhc-CCCEEEEECCCCChhHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 468999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCCChhHHHHHHHHHHHHhcccchhhccccccccccCCCCCccccCCCChhhhhh----
Q 006415 326 NSVLACMNVLLEDKPVAGSSEAYPFESTWRVIQAVRKKLSAFWPTLADELPTKLTSLKAPPAHMISSSDSEDEDTK---- 401 (646)
Q Consensus 326 ~~~~~~~~~Llg~~~~~~~~~~~p~~~~~~~i~~~~~~~~~~w~~l~~~l~~~~~~~~~~~~~~~~~~~~~~e~~~---- 401 (646)
+||..++..|+|.+.+... |.. .||+... |...|..+ .++++|.|
T Consensus 313 r~w~~~~~~l~g~~l~~~l----P~~--------------~~~~~~~------------p~~~l~~~-~~~~~~~n~~~~ 361 (388)
T 3ew8_A 313 RCWTYLTGVILGKTLSSEI----PDH--------------EFFTAYG------------PDYVLEIT-PSCRPDRNEPHR 361 (388)
T ss_dssp HHHHHHHHHHHTCCCCSBC----CCC--------------TTGGGGT------------TTCBSCCC-CCSCCCCCCHHH
T ss_pred HHHHHHHHHHcCCCCCCCC----Ccc--------------cchhhcC------------CCccccCC-cccCCCCCCHHH
Confidence 9999999999997754332 221 5888764 34556663 56788877
Q ss_pred HHHHHHHHHHHhhcccCCC
Q 006415 402 VETLEAVLQVALSKLKVDD 420 (646)
Q Consensus 402 ~~~~~~~~~~~l~~l~~~~ 420 (646)
|+.+++.|+|+|++|+.+-
T Consensus 362 l~~i~~~~~~~l~~~~~~~ 380 (388)
T 3ew8_A 362 IQQILNYIKGNLKHVVIEG 380 (388)
T ss_dssp HHHHHHHHHHHHTTCCC--
T ss_pred HHHHHHHHHHHHhcCCCcc
Confidence 9999999999999999876
No 7
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=100.00 E-value=5.7e-82 Score=668.71 Aligned_cols=309 Identities=28% Similarity=0.431 Sum_probs=277.8
Q ss_pred EEEecccccccCCCC----C--CCCCCChHHHHHHHHHHHHcCCCCcceEecCCCCCHHHHhccCCHHHHHHHHHhcccc
Q 006415 16 GLLYDERMCKHNTPD----G--DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQ 89 (646)
Q Consensus 16 ~lvyd~~~~~H~~~~----~--~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~A~~~eL~~VHs~~YI~~l~~~~~~~ 89 (646)
.++|||+|+.|+++. | ..|||+|+|++.|++.|++.|+. .+++|++|++++|++||+++||++|++.+...
T Consensus 2 ~~v~~~~~~~H~~~~~~~~G~~~~HPE~P~Rl~~i~~~L~~~gl~---~~~~p~~at~e~L~~vHs~~Yi~~l~~~~~~~ 78 (341)
T 3q9b_A 2 RVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFD---DVVAPARHGLETVLKVHDAGYLNFLETAWDRW 78 (341)
T ss_dssp EEECCGGGGGCCCSCEEETTEEECCSSCTHHHHHHHHHHHHTTCC---CEECCCCCCSTTGGGTSCHHHHHHHHHHHHHH
T ss_pred EEEECcHHhccCCcccccCCCcCCCCCChHHHHHHHHHHHhCCCC---ceeCCCCCCHHHHHHhCCHHHHHHHHHhhhhh
Confidence 579999999999863 1 25999999999999999999986 36799999999999999999999999875310
Q ss_pred hh------------h-h------------hhhhccccCceecccChHHHHHHHHhHHHHHHHHHHccccceeEEeeCCCC
Q 006415 90 FD------------S-R------------RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG 144 (646)
Q Consensus 90 ~~------------~-~------------~~~~~~~~~~~y~~~~s~eaA~lAaG~~l~aad~v~~g~~~~afalvRPPG 144 (646)
.. . + ..+......||+++++||++|++++|+++.|+++|++|+ +++||++||||
T Consensus 79 ~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~g~~~~d~dt~~~~~~~~aa~~aaG~~l~a~~~v~~g~-~~afal~rppG 157 (341)
T 3q9b_A 79 KAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGH-KAAFSLCRPPG 157 (341)
T ss_dssp HHTTCSSCBCCCBCCCTTCCCCCCSSHHHHHHHTBSBTTCCBCTTHHHHHHHHHHHHHHHHHHHHHTC-SEEEECCSSCC
T ss_pred hhcccccccccccccccccccccccchhcccceeccCCCCCcChhHHHHHHHHHHHHHHHHHHHHhCC-CceEecCCCCC
Confidence 00 0 0 001111235899999999999999999999999999998 89999999999
Q ss_pred CCCCCCCCcceeeeCcHHHHHHHHHhhCCcCCcceEEEEEeecccCCccccccccCCceEEEecccCCCCCCCCCCCCCC
Q 006415 145 HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGF 224 (646)
Q Consensus 145 HHA~~~~a~GFC~fNnvAIAA~~l~~~~~~~g~~RVlIVD~DvHHGNGTq~iF~~Dp~VL~iSiH~~~~g~fyPgt~~G~ 224 (646)
|||++++++|||+|||+||||++|+++ |++||+|||||||||||||+|||+||+|||+|||+++ +.|||++ +|.
T Consensus 158 HHA~~~~a~GFC~~NnvaiAa~~l~~~----g~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~-~~~yP~~-tG~ 231 (341)
T 3q9b_A 158 HHAGIDMFGGYCFINNAAVAAQRLLDK----GAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDP-AEAFPHF-LGY 231 (341)
T ss_dssp TTCBTTBBBTTBSSCHHHHHHHHHHHT----TCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECG-GGSTTCS-SCC
T ss_pred CCCCCCCCCCccccCHHHHHHHHHHHc----CCCeEEEEecCCCCCcchhHHhcCCCCEEEEeccCCC-ccCCCCC-CCc
Confidence 999999999999999999999999873 6899999999999999999999999999999999964 4699983 489
Q ss_pred CccccCCCCccceEeeeCCCCCCCchhHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccChhhHHHHHHHHH
Q 006415 225 YTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLM 304 (646)
Q Consensus 225 ~~eiG~g~G~G~~iNVPLp~g~~gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~DpLG~~~lt~~gy~~l~~~l~ 304 (646)
.+|+|.|+|+|+++|||||+| ++|++|+.+|+++ +|.+++|+||+||||||||+|.+||||+|+||+++|.+++++|+
T Consensus 232 ~~e~G~g~g~g~~vNvpL~~g-~~d~~y~~~~~~~-l~~l~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~~~~~~~~~l~ 309 (341)
T 3q9b_A 232 AEETGKGAGAGTTANYPMGRG-TPYSVWGEALTDS-LKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIA 309 (341)
T ss_dssp TTCCCCGGGTTCEEEEEECTT-CBHHHHHHHHHHH-HHHHHHHTCSCEEEEECCTTBTTCTTCCCBBCTTHHHHHHHHHH
T ss_pred ccccCCCCCCceeEeeecCCC-CChHHHHHHHHHH-HHHHHhhCCCEEEEeCCccccCCCCCCCccCCHHHHHHHHHHHH
Confidence 999999999999999999998 9999999999986 57889999999999999999999999999999999999999999
Q ss_pred hccCCcEEEEeCCCCCcchHHHHHHHHHHHHcC
Q 006415 305 DFAQGKIVLALEGGYNLGSISNSVLACMNVLLE 337 (646)
Q Consensus 305 ~~a~grvv~vleGGY~~~~la~~~~~~~~~Llg 337 (646)
+++ +|++++|||||+++++++++.+++++|.|
T Consensus 310 ~~~-~~~v~vleGGY~~~~l~~~~~~~l~g~~~ 341 (341)
T 3q9b_A 310 ASG-VPLLVVMEGGYGVPEIGLNVANVLKGVAG 341 (341)
T ss_dssp TTS-SCEEEEECCCCCCTTHHHHHHHHHHHHHC
T ss_pred HhC-CCEEEEECCCCChHHHHHHHHHHHHHhcC
Confidence 984 79999999999999999999999999864
No 8
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=100.00 E-value=1.2e-81 Score=669.80 Aligned_cols=309 Identities=28% Similarity=0.464 Sum_probs=278.4
Q ss_pred eEEEEecccccccCCCC----C--CCCCCChHHHHHHHHHHHHcCCCCcceEecCCCCCHHHHhccCCHHHHHHHHHhcc
Q 006415 14 RVGLLYDERMCKHNTPD----G--DYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISS 87 (646)
Q Consensus 14 ~~~lvyd~~~~~H~~~~----~--~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~A~~~eL~~VHs~~YI~~l~~~~~ 87 (646)
.+.++||++|+.|+++. | ..|||+|+|+++|++.|++.|+ .+++|++|++++|++||+++||++|++.+.
T Consensus 21 ~M~~~~~~~~~~H~~~~~~~~G~~~~HPE~P~Rl~~i~~~L~~~gl----~~~~p~~At~e~L~~vHs~~YI~~l~~~~~ 96 (362)
T 3men_A 21 SMLTYFHPDQSLHHPRTYFSRGRMRMPQEVPERAARLVAAAFAMGF----PVREPDDFGIAPIAAVHDTHYLRFLETVHR 96 (362)
T ss_dssp CCEEECCGGGGGCCCCCEEETTEEECCCSCTHHHHHHHHHHHHTTC----CEECCCCCCSHHHHTTSCHHHHHHHHHHHH
T ss_pred ceEEEEChHHHhhCCccccccCCcCCCCCChHHHHHHHHHHHhCCC----eEeCCCCCCHHHHHHhCCHHHHHHHHHhhh
Confidence 46799999999999863 1 3599999999999999999997 478999999999999999999999998753
Q ss_pred cchh----hh--------------------hhhhccccCceecccChHHHHHHHHhHHHHHHHHHHccccceeEEeeCCC
Q 006415 88 KQFD----SR--------------------RDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPP 143 (646)
Q Consensus 88 ~~~~----~~--------------------~~~~~~~~~~~y~~~~s~eaA~lAaG~~l~aad~v~~g~~~~afalvRPP 143 (646)
.... .. ..+......||+++++||++|++|+|+++.|+++|++|+ +++||++|||
T Consensus 97 ~~~~~~~~~~~e~~p~~~p~~~~~p~~~~~~~g~~~~d~Dtpv~~~~~~aa~~aaG~~l~aa~~v~~g~-~~afal~rPp 175 (362)
T 3men_A 97 EWKAMPEDWGDEAMSNIFVREPNALRGVLAQAARHLADGSCPVGEHTWRAAYWSAQSALAAAAAVRDGA-PAAYALCRPP 175 (362)
T ss_dssp HHHTSCGGGCSSBCCCBCCCSSCCCCSHHHHHHHHBCBTTCCBCTTHHHHHHHHHHHHHHHHHHHHTTC-SEEEECCSSC
T ss_pred hhhhcccccccccccccccccccccccccccccccccCCCCccchhHHHHHHHHHHHHHHHHHHHHcCC-CceEEeCCCC
Confidence 1100 00 001111235899999999999999999999999999999 9999999999
Q ss_pred CCCCCCCCCcceeeeCcHHHHHHHHHhhCCcCCcceEEEEEeecccCCccccccccCCceEEEecccCCCCCCCCCCCCC
Q 006415 144 GHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDG 223 (646)
Q Consensus 144 GHHA~~~~a~GFC~fNnvAIAA~~l~~~~~~~g~~RVlIVD~DvHHGNGTq~iF~~Dp~VL~iSiH~~~~g~fyPgt~~G 223 (646)
||||++++++|||+|||+||||++|+++ .+||+|||||||||||||+|||+||+|||+|||+++ +.|||+. +|
T Consensus 176 GHHA~~~~a~GFC~fNnvAiAa~~l~~~-----~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~-~~~yP~~-tG 248 (362)
T 3men_A 176 GHHARVDAAGGFCYLNNAAIAAQALRAR-----HARVAVLDTDMHHGQGIQEIFYARRDVLYVSIHGDP-TNFYPAV-AG 248 (362)
T ss_dssp CTTCBTTBBBTTBSSCHHHHHHHHHTTT-----CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECC-TTSTTCS-SC
T ss_pred CCCCCCCCCCCccccCHHHHHHHHHHHc-----CCeEEEEeCcCCCchhHhHHhcCCCCEEEEEecCCC-ccCCCCC-CC
Confidence 9999999999999999999999999863 589999999999999999999999999999999974 5699983 48
Q ss_pred CCccccCCCCccceEeeeCCCCCCCchhHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccChhhHHHHHHHH
Q 006415 224 FYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKL 303 (646)
Q Consensus 224 ~~~eiG~g~G~G~~iNVPLp~g~~gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~DpLG~~~lt~~gy~~l~~~l 303 (646)
..+|+|.|+|+|+++|||||+| ++|++|+.+|+++ +|++++|+||+||||||||+|.+||||+|+||+++|.+++++|
T Consensus 249 ~~~e~G~g~g~g~~vNvPL~~g-~~d~~yl~~~~~~-l~~l~~f~PdlIvvsaG~Da~~~Dplg~l~lt~~~~~~~~~~l 326 (362)
T 3men_A 249 FDDERGAGEGLGYNVNLPMPHG-SSEAAFFERVDDA-LRELRRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFGRLGHLI 326 (362)
T ss_dssp CTTCCCSGGGTTSEEEEEECTT-BCHHHHHHHHHHH-HHHHHHHCCSEEEEEECSTTBTTCTTCCBCBCHHHHHHHHHHH
T ss_pred ccccccCCCCCceeEeeccCCC-CChHHHHHHHHHH-HHHHHhcCCCEEEEECcccCcCCCCCCCccCCHHHHHHHHHHH
Confidence 9999999999999999999998 9999999999986 5789999999999999999999999999999999999999999
Q ss_pred HhccCCcEEEEeCCCCCcchHHHHHHHHHHHHcC
Q 006415 304 MDFAQGKIVLALEGGYNLGSISNSVLACMNVLLE 337 (646)
Q Consensus 304 ~~~a~grvv~vleGGY~~~~la~~~~~~~~~Llg 337 (646)
++++ +|++++|||||+++++++++.+++++|.+
T Consensus 327 ~~~~-~~~v~vleGGY~~~~l~~~~~a~l~~l~~ 359 (362)
T 3men_A 327 GALR-LPTVIVQEGGYHIESLEANARSFFGGFGA 359 (362)
T ss_dssp HTTC-CCEEEEECCCCCHHHHHHHHHHHHHHHTC
T ss_pred HhhC-CCEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 9984 79999999999999999999999999976
No 9
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=100.00 E-value=2.2e-81 Score=674.25 Aligned_cols=313 Identities=24% Similarity=0.358 Sum_probs=283.8
Q ss_pred CeEEEEecccccccCCCCCCCCCCChHHHHHHHHHHHHcCCCCcceEecCCCCCHHHHhccCCHHHHHHHHHhcccch--
Q 006415 13 RRVGLLYDERMCKHNTPDGDYHPENPNRIKAIWNKLQAAGIPQRCVVLNAKEAKDKNLLSVHTENHVNLIKNISSKQF-- 90 (646)
Q Consensus 13 ~~~~lvyd~~~~~H~~~~~~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~A~~~eL~~VHs~~YI~~l~~~~~~~~-- 90 (646)
++|+++||++|..|.++ ..|||+|+|++.|++.|++.|+.+.+.+++|++|++++|++||+++||++|++.+....
T Consensus 2 ~~t~~vy~~~~~~h~~g--~~Hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~at~~~l~~vH~~~Yv~~l~~~~~~~~~~ 79 (375)
T 1c3p_A 2 KKVKLIGTLDYGKYRYP--KNHPLKIPRVSLLLRFKDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLMEAERCQCVP 79 (375)
T ss_dssp CCEEEEECGGGGGSCCC--TTCGGGSCCHHHHHHHHHHTTCCCGGGEEECCCCCHHHHTTTSCHHHHHHHHHHHHHTSCC
T ss_pred ceEEEEECHHHcCCCCC--CCCCCCHHHHHHHHHHHHhcCCCCCCeEeCCCCCCHHHHHHhCCHHHHHHHHHhccccCCC
Confidence 46899999999999875 46999999999999999999999989999999999999999999999999998764210
Q ss_pred hhhhhhhccccCceecccChHHHHHHHHhHHHHHHHHHHccccceeEEeeCCCC--CCCCCCCCcceeeeCcHHHHHHHH
Q 006415 91 DSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG--HHAEPDEAMGFCLYNNVAVAASFL 168 (646)
Q Consensus 91 ~~~~~~~~~~~~~~y~~~~s~eaA~lAaG~~l~aad~v~~g~~~~afalvRPPG--HHA~~~~a~GFC~fNnvAIAA~~l 168 (646)
......+.-...|++++++++++|++++|+++.|+++|++|+ +++|||| |||++++++|||+||||||||++|
T Consensus 80 ~~~~~~~~l~~~dtp~~~~~~~~a~~aaGg~l~aa~~v~~g~-----~a~~ppGG~HHA~~~~a~GFC~fNnvAiAa~~l 154 (375)
T 1c3p_A 80 KGAREKYNIGGYENPVSYAMFTGSSLATGSTVQAIEEFLKGN-----VAFNPAGGMHHAFKSRANGFCYINNPAVGIEYL 154 (375)
T ss_dssp TTHHHHHCCSSSSSCSSTTTTHHHHHHHHHHHHHHHHHHTTC-----EEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHH
T ss_pred hHHhhccccCCCCcccChhHHHHHHHHhhHHHHHHHHHHcCC-----ceeecCcccceeeeccCCCceeecHHHHHHHHH
Confidence 001111211235789999999999999999999999999997 3467888 999999999999999999999999
Q ss_pred HhhCCcCCcceEEEEEeecccCCccccccccCCceEEEecccCCCCCCCCCCCCCCCcccc-CCCCccceEeeeCCCCCC
Q 006415 169 LNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIG-EGPGLGYNINVPWENGRC 247 (646)
Q Consensus 169 ~~~~~~~g~~RVlIVD~DvHHGNGTq~iF~~Dp~VL~iSiH~~~~g~fyPgt~~G~~~eiG-~g~G~G~~iNVPLp~g~~ 247 (646)
+++ |.+||||||||||||||||+|||+||+|||||||+++ ..|||+| |+.+++| .|+|+|+++|||||+| +
T Consensus 155 ~~~----g~~RV~IvD~DvHHGnGtq~iF~~dp~Vl~~SiH~~~-~~ffPgt--G~~~e~G~~g~g~g~~vNvPL~~g-~ 226 (375)
T 1c3p_A 155 RKK----GFKRILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSP-EYAFPFE--KGFLEEIGEGKGKGYNLNIPLPKG-L 226 (375)
T ss_dssp HHT----TCCCEEEEECSSSCCHHHHHHHTTCSSEEEEEEEECT-TTSTTSS--SCCTTCCCCGGGTTSEEEEEECTT-C
T ss_pred HHh----CCCeEEEEecCCCCCHHHHHHhccCCCEEEEecccCC-CCCCCCC--CCccccCCcCCCCceEEEEeCCCC-C
Confidence 874 5789999999999999999999999999999999985 3589986 8999999 9999999999999998 9
Q ss_pred CchhHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccChhhHHHHHHHHHhccCCcEEEEeCCCCCcchHHHH
Q 006415 248 GDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLALEGGYNLGSISNS 327 (646)
Q Consensus 248 gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~DpLG~~~lt~~gy~~l~~~l~~~a~grvv~vleGGY~~~~la~~ 327 (646)
+|++|+.+|+++|.|++++|+||+||||||||+|.+||||+|+||+++|.+++++|++++. +++++|||||++.++++|
T Consensus 227 ~D~~yl~a~~~~l~p~l~~F~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~~~~~~l~~~a~-~vv~vleGGY~~~~l~~~ 305 (375)
T 1c3p_A 227 NDNEFLFALEKSLEIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNIVREVFG-EGVYLGGGGYHPYALARA 305 (375)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCSEEEEECCSTTBTTCTTCSCCBCHHHHHHHHHHHHHHHC-SCEEECCCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCEEEEECCccccCCCCCCCcccCHHHHHHHHHHHHHhcc-ceEEEECCCCChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999985 599999999999999999
Q ss_pred HHHHHHHHcCCCCC
Q 006415 328 VLACMNVLLEDKPV 341 (646)
Q Consensus 328 ~~~~~~~Llg~~~~ 341 (646)
|.++++.|+|.+.+
T Consensus 306 ~~~~~~~l~g~~~~ 319 (375)
T 1c3p_A 306 WTLIWCELSGREVP 319 (375)
T ss_dssp HHHHHHHHHTCCCC
T ss_pred HHHHHHHHcCCCCC
Confidence 99999999997643
No 10
>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis}
Probab=99.56 E-value=7.7e-15 Score=152.36 Aligned_cols=140 Identities=20% Similarity=0.119 Sum_probs=109.4
Q ss_pred ccceEEEEecCCccchhhHHHHhhCCccCCCCCccCCCCCCCCcccccceeccceeeeeccCCCCcCCceeeEecCCCCC
Q 006415 436 SKVDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDC 515 (646)
Q Consensus 436 ~~~~vWYasyGSNm~~~Rf~cYi~GG~~~G~~~~~~G~~d~~~P~~~~~~~~p~~lyFa~~s~~~W~~GGvaF~~p~~~~ 515 (646)
+.+.+||++||||||.++|.++ + |-...++......+-.+++.|. . ..|+ ||+|.|.|+ +
T Consensus 124 s~~~~~yFaYGSnm~~~~~~~~--~------------~p~~~~~~~~~a~L~G~~l~F~-~--~~~~-~g~a~iv~~-g- 183 (285)
T 2qik_A 124 SKNPIYYFAYGSCMDNARFQKA--G------------VDHYFQDPVGRAVLKGYTTRFT-L--KRED-GSRADMLED-G- 183 (285)
T ss_dssp TCSSEEEEECSGGGSSHHHHHH--T------------CGGGSSCEEEEEEEETCEEEEE-E--EETT-EEEEEEECS-S-
T ss_pred cCCcEEEEEechhcCHhhcccc--c------------CCcccceEeEEEEEeCeEEEcC-c--CCCC-CeeeeEEEC-C-
Confidence 3457999999999999999976 2 3111224446778889999999 3 3697 999999997 5
Q ss_pred CcceeeeehhhchhhHHHHHHhhcCCCCCCCCCCCCcchhhhhhccccccccccCCCcccce-EEeeeeCC--cceEEEe
Q 006415 516 RHKAYLCLYRITLEQFNDVLLQENVYSDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNV-VYLGKEHG--IPILTMT 592 (646)
Q Consensus 516 ~~~t~~r~y~it~~Qf~di~~QE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~~lG~~~g--~pilT~T 592 (646)
+.++|.+|+||.+++..+..+|+ +..+.|..+ +.+...+| ++++|++
T Consensus 184 -~~v~Gvly~i~~~~l~~LD~~Eg-----------------------------~~~g~Y~r~~v~v~~~~g~~~~a~~Yv 233 (285)
T 2qik_A 184 -GTTEGVLYRIPYSALSYLYKREG-----------------------------VESLTYRPAFVDVEAGGRHYKDCLTFL 233 (285)
T ss_dssp -CEEEEEEEEECGGGHHHHHHHTT-----------------------------TTTTSEEEEEEEEEETTEEEEEEEEEE
T ss_pred -CEEEEEEEEECHHHHHHHHHhhC-----------------------------CCCCceEEEEEEEEECCCCEEEEEEEE
Confidence 56999999999999999999997 235778888 44444566 6788998
Q ss_pred cCCcccccccCCCCCCCCCChhHHHHHHHhhhhcCCCCHHHHHH
Q 006415 593 CSLSAVGKFKSGEFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKA 636 (646)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~Ps~~Yl~~l~~Gl~e~~~~~~~~~~~ 636 (646)
.+... +..+||+.|+++|++|+. .|++++-+..
T Consensus 234 ~~~~~---------~~~~Ps~~Yl~~i~~g~~--~g~~~~Y~~~ 266 (285)
T 2qik_A 234 VLQKE---------AEIAPPQHYQIEIERGAE--LYLSPEFTEK 266 (285)
T ss_dssp ESSCC---------CCCCCCHHHHHHHHHHHH--HHSCHHHHHH
T ss_pred ecCCC---------CCCCCHHHHHHHHHHHHh--cCCCHHHHHH
Confidence 86632 457999999999999999 4898876543
No 11
>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A
Probab=99.56 E-value=9e-15 Score=142.96 Aligned_cols=143 Identities=20% Similarity=0.315 Sum_probs=111.7
Q ss_pred ceEEEEecCCccchhhHHHHhhCCccCCCCCccCCCCCCCCcccccceeccceeeeeccC---CCCcCCceeeEecCCCC
Q 006415 438 VDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDS---SHTWGPGGVAFLNPECD 514 (646)
Q Consensus 438 ~~vWYasyGSNm~~~Rf~cYi~GG~~~G~~~~~~G~~d~~~P~~~~~~~~p~~lyFa~~s---~~~W~~GGvaF~~p~~~ 514 (646)
..+||++||||||.+||.+ +.++++......+-.|+++|...| +..|. ||++.+.|..+
T Consensus 15 ~~~~~FaYGSlm~~~~~~~-----------------~~~~~~~~~~a~l~gy~l~f~~~~~~~~~~~~-g~~~~lv~~~g 76 (188)
T 3cry_A 15 ESFLYFAYGSNLLTERIHL-----------------RNPSAAFFCVARLQDFKLDFGNSQGKTSQTWH-GGIATIFQSPG 76 (188)
T ss_dssp CEEEEEECSGGGSHHHHHH-----------------HCTTCEEEEEEEEEEEEEEEEEETTCCCTTTS-SCEEEEEEEEE
T ss_pred CCEEEEEEccCCCHHHHHh-----------------hCCCCceEEEEEEcCEEEEECCCCCCCcCCCC-CeeEeEEeCCC
Confidence 4699999999999999983 455555666667677899999983 25797 99999999665
Q ss_pred CCcceeeeehhhchhhHHHHHHhhcCCCCCCCCCCCCcchhhhhhccccccccccCCCcccceEEeee-eCC--cceEEE
Q 006415 515 CRHKAYLCLYRITLEQFNDVLLQENVYSDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGK-EHG--IPILTM 591 (646)
Q Consensus 515 ~~~~t~~r~y~it~~Qf~di~~QE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~lG~-~~g--~pilT~ 591 (646)
+.++|.+|+||.+++..+..+|+ +..+.|..+..-.. .+| ++.+|+
T Consensus 77 --~~V~G~ly~v~~~~l~~LD~~Eg-----------------------------~~~g~Y~r~~v~V~~~~g~~~~a~vY 125 (188)
T 3cry_A 77 --DEVWGVVWKMNKSNLNSLDEQQG-----------------------------VKSGMYVVIEVKVATQEGKEITCRSY 125 (188)
T ss_dssp --EEEEEEEEEEEGGGHHHHHHHTT-----------------------------GGGTSCEEEEEEEEETTCCEEEEEEE
T ss_pred --CEEEEEEEEECHHHHHHHHHHhC-----------------------------CCCCcEEEEEEEEEeCCCCEEEEEEE
Confidence 56999999999999999999997 22456887765444 457 566777
Q ss_pred ecCCcccccccCCCCCCCCCChhHHHHHHHhhhhcCCCCHHHHHHHHHHh
Q 006415 592 TCSLSAVGKFKSGEFPLRAPAPPYTNTLIKGLVEGKQLSEEEAKAYIHEA 641 (646)
Q Consensus 592 T~~~~~~~~~~~~~~~~~~Ps~~Yl~~l~~Gl~e~~~~~~~~~~~Yl~~~ 641 (646)
+..... ..+||+.|+++|++|+.+. |++++-+ .+|.+.
T Consensus 126 v~~~~~----------~~~ps~~Yl~~i~~g~~~~-gl~~~y~-~~L~~~ 163 (188)
T 3cry_A 126 LMTNYE----------SAPPSPQYKKIICMGAKEN-GLPLEYQ-EKLKAI 163 (188)
T ss_dssp ECSSEE----------ECCCCHHHHHHHHHHHHHT-TCCHHHH-HHHHTC
T ss_pred EecCCC----------CCCChHHHHHHHHHHHHHh-CcCHHHH-HHHhcc
Confidence 765421 2789999999999999887 8998764 566643
No 12
>2g0q_A AT5G39720.1 protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana}
Probab=95.97 E-value=0.014 Score=55.89 Aligned_cols=76 Identities=11% Similarity=-0.068 Sum_probs=54.7
Q ss_pred ceEEEEecCCccchhhHHHHhhCCccCCCCCccCCCCCCCCcccccceeccceeeeeccCCCCcCCceeeEecCCCCCCc
Q 006415 438 VDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRH 517 (646)
Q Consensus 438 ~~vWYasyGSNm~~~Rf~cYi~GG~~~G~~~~~~G~~d~~~P~~~~~~~~p~~lyFa~~s~~~W~~GGvaF~~p~~~~~~ 517 (646)
...||+.|||||+.+++. ++.+.. |....+.+--+++|+. |+ +|...+-|..+ +
T Consensus 16 ~~~~vFvYGSL~~~~~~~-~~l~~~----------------~~~~~A~l~Gy~l~~~------~~-~~yP~lv~~~g--~ 69 (173)
T 2g0q_A 16 QLHNVFVYGSFQDPDVIN-VMLDRT----------------PEIVSATLPGFQRFRL------KG-RLYPCIVPSEK--G 69 (173)
T ss_dssp SSEEEEECSGGGCHHHHH-HHTSSC----------------CEEEEEEEETCEECCC------CS-SSCCCEECCTT--C
T ss_pred CCEEEEEEcCCCCCccCH-HHhcCC----------------CceeEEEEcCeEEEee------CC-CeeeEEEECCC--C
Confidence 358999999999999887 444421 2223333334567663 44 68888888765 5
Q ss_pred ceeeeeh-hhchhhHHHHHHhhc
Q 006415 518 KAYLCLY-RITLEQFNDVLLQEN 539 (646)
Q Consensus 518 ~t~~r~y-~it~~Qf~di~~QE~ 539 (646)
.+.|.+| .|+.+++..+...|.
T Consensus 70 ~V~G~v~~~v~~~~l~~LD~~Eg 92 (173)
T 2g0q_A 70 EVHGKVLMGVTSDELENLDAVEG 92 (173)
T ss_dssp EEEEEEEEEECHHHHHHHHHHHT
T ss_pred EEEEEEEEEcCHHHHHHHHHHhh
Confidence 5999987 599999999999994
No 13
>2jqv_A AT3G28950, AIG2 protein-like; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana}
Probab=95.05 E-value=0.019 Score=54.38 Aligned_cols=76 Identities=11% Similarity=-0.067 Sum_probs=52.6
Q ss_pred ceEEEEecCCccchhhHHHHhhCCccCCCCCccCCCCCCCCcccccceeccceeeeeccCCCCcCCceeeEecCCCCCCc
Q 006415 438 VDVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRH 517 (646)
Q Consensus 438 ~~vWYasyGSNm~~~Rf~cYi~GG~~~G~~~~~~G~~d~~~P~~~~~~~~p~~lyFa~~s~~~W~~GGvaF~~p~~~~~~ 517 (646)
...||+.|||||+.+.+. ++.|. .+.......--++++|. |+ ++..-+-|..+ +
T Consensus 7 ~~~~vFvYGSL~~~~~~~-~~~~~----------------~~~~~~a~l~Gy~~~~~------~~-~~yP~lv~~~~--~ 60 (165)
T 2jqv_A 7 QSHNVFVYGSILEPAVAA-VILDR----------------TADTVPAVLHGYHRYKL------KG-LPYPCIVSSDS--G 60 (165)
T ss_dssp SCEEEEESSTTSSHHHHH-HHTSS----------------CCEEEEEEEETCEECCC------TT-SSSCCEESCCS--S
T ss_pred CceEEEEEcCCCCchhhH-HHhCC----------------CCccceEEEeCeEEEec------CC-CCCCEEEECCC--C
Confidence 348999999999999985 55542 12233333334577774 33 45566666654 4
Q ss_pred ceeeeehh-hchhhHHHHHHhhc
Q 006415 518 KAYLCLYR-ITLEQFNDVLLQEN 539 (646)
Q Consensus 518 ~t~~r~y~-it~~Qf~di~~QE~ 539 (646)
.+.|-+|. |+.+++..+..-|.
T Consensus 61 ~V~G~v~~~v~~~~l~~LD~~E~ 83 (165)
T 2jqv_A 61 KVNGKVITGVSDAELNNFDVIEG 83 (165)
T ss_dssp EEEEEEEEEECHHHHHHHHHTTT
T ss_pred EEEEEEEEeCCHHHHHHHHHhcc
Confidence 69999996 99999998888883
No 14
>1vkb_A Hypothetical protein; gamma-glutamyl cyclotransferase-like fold, structural genomi center for structural genomics, JCSG, protein structure INI PSI; 1.90A {Mus musculus} SCOP: d.269.1.1 PDB: 2kl2_A
Probab=90.57 E-value=0.13 Score=48.77 Aligned_cols=129 Identities=9% Similarity=-0.040 Sum_probs=81.1
Q ss_pred EEecCCccchhhHHHHhhCCccCCCCCccCCCCCCCCcccccceec-cceeeeeccCCCCcCCceeeEecCCCCCCccee
Q 006415 442 YASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTF-PHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAY 520 (646)
Q Consensus 442 YasyGSNm~~~Rf~cYi~GG~~~G~~~~~~G~~d~~~P~~~~~~~~-p~~lyFa~~s~~~W~~GGvaF~~p~~~~~~~t~ 520 (646)
.+-||+=|--..=..+++.. +.+..+......++ .|+|+|...+. .+.|.+.|... ..++
T Consensus 16 vFVYGTLk~G~~Nh~~l~~~------------r~~~A~~~G~~~tl~~YpL~~~g~~~-----~p~~~i~p~~g--~~V~ 76 (161)
T 1vkb_A 16 IFVYGTLKRGQPNHKVMLDH------------SHGLAAFRGRGCTVESFPLVIAGEHN-----IPWLLYLPGKG--HCVT 76 (161)
T ss_dssp EEECSTTSTTSTTTHHHHCG------------GGCCEEEEEEEEESSCBCEEEETTTT-----EEEEESCTTSS--BCCE
T ss_pred EEEcCCCCCCCcChHHHhhC------------cCCCceEEEEEeecCCceEEEecCCC-----cceeEeecCCC--CEEE
Confidence 35577655544444455541 12444445555444 79999987531 34466666544 5699
Q ss_pred eeehhhchhhHHHHHHhhcCCCCCCCCCCCCcchhhhhhccccccccccCCCcccceEEeeee--------CCcceEEEe
Q 006415 521 LCLYRITLEQFNDVLLQENVYSDDVSSPLFDTNDLNSVANKKAVSLEALKNGWYHNVVYLGKE--------HGIPILTMT 592 (646)
Q Consensus 521 ~r~y~it~~Qf~di~~QE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~lG~~--------~g~pilT~T 592 (646)
|-+|.|+.+.+..+..+|. . |+.|..+..-.+. +|.++..++
T Consensus 77 Gevy~v~~~~L~~LD~~Eg-----------------------------~-p~~Y~R~~v~V~~~~~~~~~~~g~~v~A~v 126 (161)
T 1vkb_A 77 GEIYEVDEQMLRFLDDFED-----------------------------C-PSMYQRTALQVQVLEWEGDGDPGDSVQCFV 126 (161)
T ss_dssp EEEEEECHHHHHHHHHHTT-----------------------------T-TTSCEEEEEEEEEEEEC----CCSEEEEEE
T ss_pred EEEEEECHHHHHHHHHhcC-----------------------------C-CCceEEEEEEEEecccccccCCCCEEEEEE
Confidence 9999999999999999995 1 3668876554433 565554433
Q ss_pred cCCcccccccCCCCCCCCCChhHHHHHHHhhhhcCCC
Q 006415 593 CSLSAVGKFKSGEFPLRAPAPPYTNTLIKGLVEGKQL 629 (646)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~Ps~~Yl~~l~~Gl~e~~~~ 629 (646)
=-.. ..+...||+.|++ +..|..+. |+
T Consensus 127 Yv~~--------~~~~~lps~~Yl~-i~~ga~~~-gl 153 (161)
T 1vkb_A 127 YTTA--------TYAPEWLFLPYHE-SYDSEGPH-GL 153 (161)
T ss_dssp EEES--------CCCGGGGGSCCCS-SCCTTSTT-CC
T ss_pred EEcC--------CCCccCCChhHHH-HHhhHHHh-CC
Confidence 3111 1133469999999 99988766 45
No 15
>1xhs_A Hypothetical UPF0131 protein YTFP; structure, autostructure, northeast structural genomics consortium, NESG, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.269.1.1
Probab=64.32 E-value=4.3 Score=36.31 Aligned_cols=69 Identities=12% Similarity=-0.050 Sum_probs=47.1
Q ss_pred EEEecCCccchhhHHHHhhCCccCCCCCccCCCCCCCCcccccceecc-ceeeeeccCCCCcCCceeeEecCCCCCCcce
Q 006415 441 FYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFP-HHLFFGHDSSHTWGPGGVAFLNPECDCRHKA 519 (646)
Q Consensus 441 WYasyGSNm~~~Rf~cYi~GG~~~G~~~~~~G~~d~~~P~~~~~~~~p-~~lyFa~~s~~~W~~GGvaF~~p~~~~~~~t 519 (646)
-++.|||||..++...++.+ + ... .. -+++ |+||+-. |--.+-|.. +.+
T Consensus 2 ~vFvYGTL~~g~~~~~~l~~------------a----~~~-g~-a~l~gy~L~~~g---------~yP~lv~~~---g~V 51 (121)
T 1xhs_A 2 RIFVYGSLRHKQGNSHWMTN------------A----QLL-GD-FSIDNYQLYSLG---------HYPGAVPGN---GTV 51 (121)
T ss_dssp EEEECSCTTCCCTTTHHHHT------------C----EEE-EE-EEEEEEEEEECS---------SSEEEEEEE---EEE
T ss_pred EEEEECCCCCcccchhhcCC------------C----cEE-EE-EEEeCcEEEEec---------CCCeEEecC---CEE
Confidence 37899999999988877764 1 111 22 3444 5999643 112233432 369
Q ss_pred eeeehhhchhhHHHHHHhhc
Q 006415 520 YLCLYRITLEQFNDVLLQEN 539 (646)
Q Consensus 520 ~~r~y~it~~Qf~di~~QE~ 539 (646)
.|-+|.|+.+.+..+..-|.
T Consensus 52 ~Gevy~v~~~~l~~LD~~Eg 71 (121)
T 1xhs_A 52 HGEVYRIDNATLAELDALRT 71 (121)
T ss_dssp EEEEEECCHHHHHHHHHHHS
T ss_pred EEEEEEeCHHHHHHHHHhcC
Confidence 99999999999998888885
No 16
>1v30_A Hypothetical UPF0131 protein PH0828; alpha+beta, structural genomics, unknown function; HET: NHE; 1.40A {Pyrococcus horikoshii} SCOP: d.269.1.1
Probab=63.84 E-value=4.3 Score=36.54 Aligned_cols=70 Identities=17% Similarity=0.116 Sum_probs=47.4
Q ss_pred eEEEEecCCccchhhHHHHhhCCccCCCCCccCCCCCCCCcccccceeccceeeeeccCCCCcCCceeeEecCCCCCCcc
Q 006415 439 DVFYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHK 518 (646)
Q Consensus 439 ~vWYasyGSNm~~~Rf~cYi~GG~~~G~~~~~~G~~d~~~P~~~~~~~~p~~lyFa~~s~~~W~~GGvaF~~p~~~~~~~ 518 (646)
...++.|||||..++...++.+. +......+..++||++. ...+-|.. +.
T Consensus 7 ~~~vFVYGTL~~g~~n~~~l~~a-----------------~~~g~a~l~gy~L~~g~----------yP~lv~~~---g~ 56 (124)
T 1v30_A 7 SVRIAVYGTLRKGKPLHWYLKGA-----------------KFLGEDWIEGYQLYFEY----------LPYAVKGK---GK 56 (124)
T ss_dssp CEEEEECSTTSTTSTTGGGGTTS-----------------EEEEEEEEEEEEEEESS----------SEEEEEEE---EE
T ss_pred ccEEEEECCCCCchHhHHhcCCC-----------------cEEEEEEEeeEEEEECC----------CCEEEecC---CE
Confidence 36799999999999888766541 11122333358999431 23344532 23
Q ss_pred eeeeehhhchhhHHHHHHhh
Q 006415 519 AYLCLYRITLEQFNDVLLQE 538 (646)
Q Consensus 519 t~~r~y~it~~Qf~di~~QE 538 (646)
+.|-+|.|+.+.+..+..-|
T Consensus 57 V~Gev~~v~~~~l~~LD~~E 76 (124)
T 1v30_A 57 LKVEVYEVDKETFERINEIE 76 (124)
T ss_dssp EEEEEEEECHHHHHHHTTCG
T ss_pred EEEEEEEECHHHHHHhhhcc
Confidence 89999999998888887777
No 17
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=42.40 E-value=29 Score=32.51 Aligned_cols=70 Identities=19% Similarity=0.197 Sum_probs=35.8
Q ss_pred EeeeCCCCCCCchhHHHHHHHhHHHHHHHhCCCEEEEecCC-CCCCCCCCCCcccChhhHHHHHHHHHhccCCcEEEE
Q 006415 238 INVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF-DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQGKIVLA 314 (646)
Q Consensus 238 iNVPLp~g~~gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGf-Da~~~DpLG~~~lt~~gy~~l~~~l~~~a~grvv~v 314 (646)
+|.-+. | ..-.+.+.-|++.+ ..++||+|||..|. |...+.+.....-..+.+..+.+.++. .+.+++++
T Consensus 54 iN~Gi~-G-~tt~~~l~r~~~~v----~~~~Pd~vvi~~G~ND~~~~~~~~~~~~~~~~l~~ii~~~~~-~~~~iil~ 124 (209)
T 4hf7_A 54 IGRGIS-G-QTSYQFLLRFREDV----INLSPALVVINAGTNDVAENTGAYNEDYTFGNIASMAELAKA-NKIKVILT 124 (209)
T ss_dssp EEEECT-T-CCHHHHHHHHHHHT----GGGCCSEEEECCCHHHHTTSSSSCCHHHHHHHHHHHHHHHHH-TTCEEEEE
T ss_pred EEeccC-c-ccHHHHHHHHHHHH----HhcCCCEEEEEeCCCcCccccccccHHHHHHHHHHhhHHHhc-cCceEEEE
Confidence 555443 2 22334455454433 35799999999998 655443322222223344555555544 23344443
No 18
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=41.04 E-value=89 Score=28.53 Aligned_cols=56 Identities=20% Similarity=0.293 Sum_probs=32.9
Q ss_pred eeeCCCCCCCchhHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccChhhH----HHHHHHHHhcc
Q 006415 239 NVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGDPLGGCRVTPYGY----SVMLKKLMDFA 307 (646)
Q Consensus 239 NVPLp~g~~gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~DpLG~~~lt~~gy----~~l~~~l~~~a 307 (646)
|.....+ ++....+..++. .+...+||+|++..|.. | +..+++.| ..+.+.++...
T Consensus 50 ~~~~~~~-~~~~~~~~~~~~----~~~~~~pd~Vvi~~G~N----D----~~~~~~~~~~~l~~ii~~l~~~~ 109 (200)
T 4h08_A 50 RLSNSKS-VGDPALIEELAV----VLKNTKFDVIHFNNGLH----G----FDYTEEEYDKSFPKLIKIIRKYA 109 (200)
T ss_dssp EEEESCC-TTCHHHHHHHHH----HHHHSCCSEEEECCCSS----C----TTSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEeccCC-ccHHHHHHHHHH----HHhcCCCCeEEEEeeeC----C----CCCCHHHHHHHHHHHHHHHhhhC
Confidence 4444333 455555555544 35678999999999974 2 13455544 44555555544
No 19
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=40.47 E-value=43 Score=30.43 Aligned_cols=45 Identities=16% Similarity=0.266 Sum_probs=26.3
Q ss_pred HHHHHhCCCEEEEecCC-CCCCCCCCCCcccChhh----HHHHHHHHHhccCCcEEEE
Q 006415 262 PVAKDFGPDIIIISAGF-DAAAGDPLGGCRVTPYG----YSVMLKKLMDFAQGKIVLA 314 (646)
Q Consensus 262 Pi~~~F~PdlIvvsaGf-Da~~~DpLG~~~lt~~g----y~~l~~~l~~~a~grvv~v 314 (646)
..+..++||+|||..|. |... ..+.+. |..+.+.++.. +.+++++
T Consensus 56 ~~~~~~~pd~Vii~~G~ND~~~-------~~~~~~~~~~l~~li~~~~~~-~~~vil~ 105 (190)
T 1ivn_A 56 ALLKQHQPRWVLVELGGNDGLR-------GFQPQQTEQTLRQILQDVKAA-NAEPLLM 105 (190)
T ss_dssp HHHHHHCCSEEEEECCTTTTSS-------SCCHHHHHHHHHHHHHHHHHT-TCEEEEE
T ss_pred HHHHhcCCCEEEEEeecccccc-------CCCHHHHHHHHHHHHHHHHHc-CCCEEEE
Confidence 44567899999999998 4432 234444 44445555543 3345544
No 20
>3jud_A AIG2-like domain-containing protein 1; cyclotransferase, gamma-glutamylamine cyclotransferase, gamma-glutamyl-epsilon-lysine; 0.98A {Homo sapiens} SCOP: d.269.1.1 PDB: 3jub_A 3juc_A
Probab=37.50 E-value=1.3e+02 Score=27.61 Aligned_cols=79 Identities=9% Similarity=0.004 Sum_probs=54.0
Q ss_pred EEecCCccchhhHHHHhhCCccCCCCCccCCCCCCCCcccccceec-cceeeeeccCCCCcCCceeeEecCCCCCCccee
Q 006415 442 YASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTF-PHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAY 520 (646)
Q Consensus 442 YasyGSNm~~~Rf~cYi~GG~~~G~~~~~~G~~d~~~P~~~~~~~~-p~~lyFa~~s~~~W~~GGvaF~~p~~~~~~~t~ 520 (646)
.+-||+-|.-..-+.++++++ | +.........+. +|.++|.... +..|+-+.+.....+.
T Consensus 4 vFVYGTL~~G~~Nh~~l~~~~----------~--~~A~~~G~~~t~~~Ypl~~~g~~-------~~P~l~~~p~~g~~V~ 64 (153)
T 3jud_A 4 VFVYGTLKRGQPNHRVLRDGA----------H--GSAAFRARGRTLEPYPLVIAGEH-------NIPWLLHLPGSGRLVE 64 (153)
T ss_dssp EEECSTTSTTSTTGGGGTCGG----------G--CCEEEEEEEEESSCBCEEEETTT-------TEEEEBSCTTSSBCCE
T ss_pred EEEeCCCCCCCcChHHHhcCc----------C--CCeEEEEEEEeCCCccEEEecCC-------CCceEEecCCCCCEEE
Confidence 357999998888777777643 1 222233334455 7899987532 3566666554445799
Q ss_pred eeehhhchhhHHHHHHhhc
Q 006415 521 LCLYRITLEQFNDVLLQEN 539 (646)
Q Consensus 521 ~r~y~it~~Qf~di~~QE~ 539 (646)
|-+|.|+.+.+..+..=|.
T Consensus 65 G~ly~v~~~~l~~LD~~Eg 83 (153)
T 3jud_A 65 GEVYAVDERMLRFLDDFQS 83 (153)
T ss_dssp EEEEEECHHHHHHHHHHTT
T ss_pred EEEEEECHHHHHHHHHhcC
Confidence 9999999988888888885
No 21
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=35.48 E-value=27 Score=31.45 Aligned_cols=28 Identities=21% Similarity=0.389 Sum_probs=19.0
Q ss_pred hhHHHHHHHhHHHHHHHhCCCEEEEecCC-CCC
Q 006415 250 ADYLAVWDHILLPVAKDFGPDIIIISAGF-DAA 281 (646)
Q Consensus 250 ~~Yl~af~~vv~Pi~~~F~PdlIvvsaGf-Da~ 281 (646)
.+.+..++. .+..++||+|+|..|. |..
T Consensus 52 ~~~~~~~~~----~~~~~~pd~vvi~~G~ND~~ 80 (185)
T 3hp4_A 52 GGALRRLDA----LLEQYEPTHVLIELGANDGL 80 (185)
T ss_dssp HHHHHHHHH----HHHHHCCSEEEEECCHHHHH
T ss_pred HHHHHHHHH----HHhhcCCCEEEEEeecccCC
Confidence 344444433 4566899999999997 543
No 22
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=31.82 E-value=33 Score=31.25 Aligned_cols=67 Identities=13% Similarity=0.186 Sum_probs=34.9
Q ss_pred eEeeeCCCCCCCchhHHHHHHHhHHHHHHHhCCCEEEEecCC-CCCCCCCCCCcccChhh----HHHHHHHHHhccCCcE
Q 006415 237 NINVPWENGRCGDADYLAVWDHILLPVAKDFGPDIIIISAGF-DAAAGDPLGGCRVTPYG----YSVMLKKLMDFAQGKI 311 (646)
Q Consensus 237 ~iNVPLp~g~~gD~~Yl~af~~vv~Pi~~~F~PdlIvvsaGf-Da~~~DpLG~~~lt~~g----y~~l~~~l~~~a~grv 311 (646)
.+|.-++- ..-.+.+..++. .+..++||+|+|..|. |...+.. ..+.+. |..+.+.++. .+.++
T Consensus 49 v~n~g~~G--~~~~~~~~~~~~----~~~~~~pd~vvi~~G~ND~~~~~~----~~~~~~~~~~~~~~i~~~~~-~~~~v 117 (204)
T 3p94_A 49 FVDRGISG--QTTSEMLVRFRQ----DVINLKPKAVVILAGINDIAHNNG----VIALENVFGNLVSMAELAKA-NHIKV 117 (204)
T ss_dssp EEEEECTT--CCHHHHHHHHHH----HTGGGCEEEEEEECCHHHHTTTTS----CCCHHHHHHHHHHHHHHHHH-TTCEE
T ss_pred eEEcccCc--ccHHHHHHHHHH----HHHhCCCCEEEEEeecCccccccC----CCCHHHHHHHHHHHHHHHHh-CCCeE
Confidence 35665542 233344444433 3345899999999998 5554321 134444 4444555554 23345
Q ss_pred EEE
Q 006415 312 VLA 314 (646)
Q Consensus 312 v~v 314 (646)
+++
T Consensus 118 il~ 120 (204)
T 3p94_A 118 IFC 120 (204)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 23
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=29.75 E-value=45 Score=33.61 Aligned_cols=34 Identities=12% Similarity=0.320 Sum_probs=27.4
Q ss_pred hHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCCC
Q 006415 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284 (646)
Q Consensus 251 ~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~D 284 (646)
.+...+...|..++++++||+||.-.|.|.|.+.
T Consensus 131 ~~~~~l~~~l~~~ir~~~PdvV~t~~~~d~HpDH 164 (273)
T 3dff_A 131 DLVGEVADDIRSIIDEFDPTLVVTCAAIGEHPDH 164 (273)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEECCTTCCHHH
T ss_pred chHHHHHHHHHHHHHHcCCCEEEECCCCCCChHH
Confidence 3556677778889999999999998888877653
No 24
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=28.73 E-value=53 Score=30.63 Aligned_cols=51 Identities=12% Similarity=0.249 Sum_probs=33.5
Q ss_pred hhHHHHHHHhHHHHHHHhCCCEEEEecCC-CCCCCCCCCCcccChhhHHHHHHHHHhccCC
Q 006415 250 ADYLAVWDHILLPVAKDFGPDIIIISAGF-DAAAGDPLGGCRVTPYGYSVMLKKLMDFAQG 309 (646)
Q Consensus 250 ~~Yl~af~~vv~Pi~~~F~PdlIvvsaGf-Da~~~DpLG~~~lt~~gy~~l~~~l~~~a~g 309 (646)
.+.+..++. .+..++||+|+|..|. |...+. ..+.+.|..+.+.+++...+
T Consensus 69 ~~~~~~l~~----~l~~~~pd~vvi~~G~ND~~~~~-----~~~~~~l~~li~~i~~~~p~ 120 (215)
T 2vpt_A 69 PQIASNINN----WLNTHNPDVVFLWIGGNDLLLNG-----NLNATGLSNLIDQIFTVKPN 120 (215)
T ss_dssp HHHHHHHHH----HHHHHCCSEEEEECCHHHHHHHC-----CCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHH----HhhccCCCEEEEEccccccCCCC-----ChhHHHHHHHHHHHHHhCCC
Confidence 344444443 3456899999999998 544321 23467888888888886543
No 25
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=28.16 E-value=52 Score=33.02 Aligned_cols=34 Identities=9% Similarity=0.231 Sum_probs=27.4
Q ss_pred hHHHHHHHhHHHHHHHhCCCEEEEecCCCCCCCC
Q 006415 251 DYLAVWDHILLPVAKDFGPDIIIISAGFDAAAGD 284 (646)
Q Consensus 251 ~Yl~af~~vv~Pi~~~F~PdlIvvsaGfDa~~~D 284 (646)
.+...+...|..++++++||+||.-.|.|.|.+.
T Consensus 128 ~~~~~~~~~l~~~ir~~~PdvV~t~~~~d~HpDH 161 (270)
T 3dfi_A 128 DLVAAIREDIESMIAECDPTLVLTCVAIGKHPDH 161 (270)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEECCTTCCHHH
T ss_pred chHHHHHHHHHHHHHHcCCCEEEeCCCCCCChhH
Confidence 3456677778889999999999998888877654
No 26
>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis}
Probab=27.29 E-value=57 Score=33.02 Aligned_cols=63 Identities=10% Similarity=-0.058 Sum_probs=41.0
Q ss_pred EEEecCCccchhhHHHHhhCCccCCCCCccCCCCCCCCcccccceeccceeeeeccCCCCcCCceeeEecCCCCCCccee
Q 006415 441 FYASFGSNMWKSRFLCYIEGGQVEGMQKPCSGSKDRNPPKEILWKTFPHHLFFGHDSSHTWGPGGVAFLNPECDCRHKAY 520 (646)
Q Consensus 441 WYasyGSNm~~~Rf~cYi~GG~~~G~~~~~~G~~d~~~P~~~~~~~~p~~lyFa~~s~~~W~~GGvaF~~p~~~~~~~t~ 520 (646)
-++.|||+|..+....++.| .+....+-+++++||+-. |. -+ +-|.++..+.+.
T Consensus 4 ~vFVYGTL~~g~~n~~~l~~-----------------~~~~~~~~~~~g~L~~~g-----~~---P~-lv~~~~~~~~V~ 57 (285)
T 2qik_A 4 LLFVYGTLRKHEKNHHLLAQ-----------------SACINEQARTKGSLFAAK-----EG---PT-VVFNDEDEGYIY 57 (285)
T ss_dssp EEEECSTTSTTSTTGGGGTT-----------------CEEEEEEEEEESEEEEC-------C---EE-EECCTTCCSEEE
T ss_pred EEEEECCCCCCCcChHHhCC-----------------CeEeeeeEEEEEEEEEcC-----CC---Ce-EEEccCCCCEEE
Confidence 46899999999888777665 123344556688999532 32 23 334433345699
Q ss_pred eeehhhchh
Q 006415 521 LCLYRITLE 529 (646)
Q Consensus 521 ~r~y~it~~ 529 (646)
|-+|.|+.+
T Consensus 58 Gev~~v~~~ 66 (285)
T 2qik_A 58 GEVYEADEL 66 (285)
T ss_dssp EEEEEECHH
T ss_pred EEEEEcCHH
Confidence 999999954
No 27
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=25.54 E-value=70 Score=29.35 Aligned_cols=41 Identities=34% Similarity=0.489 Sum_probs=25.0
Q ss_pred HHHHHhCC-CEEEEecCC-CCCCCCCCCCcccChh----hHHHHHHHHHhcc
Q 006415 262 PVAKDFGP-DIIIISAGF-DAAAGDPLGGCRVTPY----GYSVMLKKLMDFA 307 (646)
Q Consensus 262 Pi~~~F~P-dlIvvsaGf-Da~~~DpLG~~~lt~~----gy~~l~~~l~~~a 307 (646)
..+..++| |+|+|..|. |... ....+.+ .+..+.+.+++..
T Consensus 76 ~~l~~~~p~d~vvi~~G~ND~~~-----~~~~~~~~~~~~l~~li~~~~~~~ 122 (216)
T 2q0q_A 76 SCLATHLPLDLVIIMLGTNDTKA-----YFRRTPLDIALGMSVLVTQVLTSA 122 (216)
T ss_dssp HHHHHHCSCSEEEEECCTGGGSG-----GGCCCHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHhCCCCCEEEEEecCcccch-----hcCCCHHHHHHHHHHHHHHHHHhc
Confidence 34567898 999999998 5432 1234444 3455555555543
No 28
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=23.36 E-value=1.5e+02 Score=28.75 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=24.4
Q ss_pred hhHHHHHHHhHHHHHHHhCCCEEEEecCC-CCCCCCCCCC
Q 006415 250 ADYLAVWDHILLPVAKDFGPDIIIISAGF-DAAAGDPLGG 288 (646)
Q Consensus 250 ~~Yl~af~~vv~Pi~~~F~PdlIvvsaGf-Da~~~DpLG~ 288 (646)
.+.+..|+.++ .. ...+||+|+|..|. |.....|++.
T Consensus 72 ~~~~~~~~~~l-~~-~~~~pd~V~I~~G~ND~~~~~~~~~ 109 (274)
T 3bzw_A 72 DDVPRQAEKLK-KE-HGGEVDAILVFMGTNDYNSSVPIGE 109 (274)
T ss_dssp GGHHHHHHHHH-HH-HTTTCCEEEEECCHHHHHTTCCCCC
T ss_pred HHHHHHHHHHH-hc-cCCCCCEEEEEEecccCcccCCCcc
Confidence 34555565532 11 22789999999999 7777666664
No 29
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=22.55 E-value=1.3e+02 Score=28.32 Aligned_cols=41 Identities=20% Similarity=0.164 Sum_probs=25.4
Q ss_pred HHHHHHhCC-CEEEEecCC-CCCCCCCCCCcccChh----hHHHHHHHHHhc
Q 006415 261 LPVAKDFGP-DIIIISAGF-DAAAGDPLGGCRVTPY----GYSVMLKKLMDF 306 (646)
Q Consensus 261 ~Pi~~~F~P-dlIvvsaGf-Da~~~DpLG~~~lt~~----gy~~l~~~l~~~ 306 (646)
...+..++| |+|||..|. |.... ...+.+ .+..+.+.++..
T Consensus 93 ~~~l~~~~p~d~VvI~~GtND~~~~-----~~~~~~~~~~~l~~li~~ir~~ 139 (232)
T 3dci_A 93 EVALSCHMPLDLVIIMLGTNDIKPV-----HGGRAEAAVSGMRRLAQIVETF 139 (232)
T ss_dssp HHHHHHHCSCSEEEEECCTTTTSGG-----GTSSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhhCCCCCEEEEEeccCCCccc-----cCCCHHHHHHHHHHHHHHHHHh
Confidence 344577899 999999997 44332 223444 445555566654
No 30
>1ans_A Neurotoxin III; NMR {Anemonia sulcata} SCOP: g.11.1.1
Probab=21.94 E-value=48 Score=21.90 Aligned_cols=21 Identities=29% Similarity=0.422 Sum_probs=17.6
Q ss_pred HHhhCCccCCCCCccCCCCCCC
Q 006415 456 CYIEGGQVEGMQKPCSGSKDRN 477 (646)
Q Consensus 456 cYi~GG~~~G~~~~~~G~~d~~ 477 (646)
||. ||+|=|-.-..-||.-|.
T Consensus 6 C~~-~gCpWGQ~~~~~GCSgpk 26 (27)
T 1ans_A 6 CYW-GGCPWGQNCYPEGCSGPK 26 (27)
T ss_dssp STT-TTCSSSCSSCSSCSSSSC
T ss_pred ccc-cCCccccccccccCcCCC
Confidence 676 999999999999997653
No 31
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=21.11 E-value=1.6e+02 Score=31.72 Aligned_cols=73 Identities=18% Similarity=0.229 Sum_probs=44.4
Q ss_pred HHHHhHHHHHHHhCCCEEEEecCC-CCCCCCCCCCcccChhhHHHHHHHHHhcc----CCcEEEEeCCCCCcch---HHH
Q 006415 255 VWDHILLPVAKDFGPDIIIISAGF-DAAAGDPLGGCRVTPYGYSVMLKKLMDFA----QGKIVLALEGGYNLGS---ISN 326 (646)
Q Consensus 255 af~~vv~Pi~~~F~PdlIvvsaGf-Da~~~DpLG~~~lt~~gy~~l~~~l~~~a----~grvv~vleGGY~~~~---la~ 326 (646)
-+.+.|..+++.|+|++|+|.... -...||. ...+.+.+..-. +-+|+.+--.||.... ...
T Consensus 83 ~L~~aI~~~~~~~~P~~I~V~tTC~~e~IGdD----------i~~v~~~~~~~~~~~~~~pvi~v~tpgf~gs~~~G~~~ 152 (458)
T 1mio_B 83 NIKTAVKNIFSLYNPDIIAVHTTCLSETLGDD----------LPTYISQMEDAGSIPEGKLVIHTNTPSYVGSHVTGFAN 152 (458)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEECHHHHHHTCC----------HHHHHHHHHHTTCSCTTCEEEEECCCTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEECCcHHHHHhcC----------HHHHHHHHHHhcCCCCCCeEEEEECCCCcccHHHHHHH
Confidence 345666777889999999887654 3334443 344555554432 3578888888888532 233
Q ss_pred HHHHHHHHHcC
Q 006415 327 SVLACMNVLLE 337 (646)
Q Consensus 327 ~~~~~~~~Llg 337 (646)
++.++++.|.+
T Consensus 153 a~~al~~~l~~ 163 (458)
T 1mio_B 153 MVQGIVNYLSE 163 (458)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHcc
Confidence 44555555554
Done!