BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006429
(645 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo
sapiens GN=ADCK1 PE=2 SV=2
Length = 530
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 161/291 (55%), Gaps = 14/291 (4%)
Query: 36 KSKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLP 95
+SK ++ + H R+A+R+ L G ++K+GQ+L +LPE Y S LK L P
Sbjct: 71 RSKSWPVFLQVHLRSARRLCELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAP 130
Query: 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIK 155
+QE+ Q I + G+ + +F F +TPL TAS+AQVH+A L DGR V VKVQH ++
Sbjct: 131 QSSMQEIRQVIREDLGKEIHDLFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVR 190
Query: 156 TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCK 215
+D+ + +V + P+++F ++DE K P ELDF +E N VS L
Sbjct: 191 AQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQML--- 247
Query: 216 NKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275
+H D K P D+ S+E VL++EF+DG ++ND + +E ++ ++ +
Sbjct: 248 -RHFDFLKVPRIHWDL-------STERVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLG 299
Query: 276 RAYAHQIYVDGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSSSMK 323
+ Y+ I+V+GF + DPHPGN LV K P +LLD GL + L+ +
Sbjct: 300 KMYSEMIFVNGFVHCDPHPGNVLVRKHPGTGKAEIVLLDHGLYQMLTEEFR 350
>sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus
musculus GN=Adck1 PE=2 SV=1
Length = 525
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 154/282 (54%), Gaps = 14/282 (4%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A+R+ L G ++K+GQ+L +LPE Y S LK L P +QEV Q
Sbjct: 73 QVHLRSARRLFELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAPQSSMQEVRQ 132
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F+ F +TPL AS+AQVH+A L DGR V VKVQH ++ +D+
Sbjct: 133 VIREDLGKEIHDLFLSFDDTPLGAASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILL 192
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ +V + P ++F ++DE K P ELDF +E N V+ L +H D K
Sbjct: 193 MEVLVLAVKQLFPDFEFMWLVDEAKKNLPLELDFLNEGRNAEKVAHML----RHFDFLKV 248
Query: 225 PAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYV 284
P ++ S++ VL++EF++G ++ND +E ++ ++ + + Y+ I+V
Sbjct: 249 PQIHWEL-------STKRVLLMEFVEGGQVNDRAYMEKNQIDVNEISCHLGKMYSEMIFV 301
Query: 285 DGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSSSMK 323
+GF + DPHPGN LV K P +LLD GL + L+ +
Sbjct: 302 NGFVHCDPHPGNVLVRKRPDTGKAEIVLLDHGLYQVLTEEFR 343
>sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus
gallus GN=ADCK1 PE=2 SV=1
Length = 519
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 14/299 (4%)
Query: 42 LWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQE 101
L + H R+A+R+ L G ++K+GQ+L +LPE Y LK L P QE
Sbjct: 67 LKSQVHLRSAERLRELCCANRGTFIKVGQHLGALDYLLPEEYTRTLKVLHSQAPQSTRQE 126
Query: 102 VSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILED 161
+ Q I + G+ + +F+ F +TPL AS+AQVH+A L DGR V VK+QH ++ +D
Sbjct: 127 IEQVIREDLGKEIKELFVSFEDTPLGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKD 186
Query: 162 LKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDS 221
+ + ++ + P ++F +++E K P ELDF +E N V+ L K+ +
Sbjct: 187 IFLMEVLLLVVKQIFPDFEFMWLVEEAKKNLPLELDFLNEGRNAEKVAQML----KNFEF 242
Query: 222 NKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281
K P ++ S+ VL++EFM+G ++ND +E G++ ++ + + Y+
Sbjct: 243 LKVPRIYWEL-------STRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLYSEM 295
Query: 282 IYVDGFFNGDPHPGNFLVSKDPPHRP---ILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
I+V+GF + DPHPGN LV K P ILLD GL + LS S + +++ A + D
Sbjct: 296 IFVNGFVHCDPHPGNVLVKKCPDSGKAYIILLDHGLYQVLSESFRMDYCRLWLALIKAD 354
>sp|P73577|Y889_SYNY3 Uncharacterized protein slr0889 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0889 PE=3 SV=1
Length = 408
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 154/290 (53%), Gaps = 19/290 (6%)
Query: 57 LIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGG 116
++++L ++KLGQ LSTR D+LP YI+ L LQ ++PP P + ++REF + +G
Sbjct: 49 ILVELGPFYIKLGQLLSTRPDLLPPRYINALTALQSNVPPLPWSAIEDLLQREFPQPLGE 108
Query: 117 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 176
F + P+A SI Q+HRA L G V +KV+ GI I+ +D K + + +A E
Sbjct: 109 TFQEIESEPIAAGSIGQIHRAVLQSGETVAIKVKRPGIDVIVEQDSLLIKDVAELLALTE 168
Query: 177 --PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIP 234
YD + DE+ + EL+F++EA T + NL K D N+ ++IP
Sbjct: 169 FGQNYDIVKLADEFTQTVKAELNFDTEAAYTNNLRTNLA-KTTWFDPNQ-------LVIP 220
Query: 235 EVI--QSSETVLILEFMDGI-----RLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGF 287
+V +++ L+LE++DG+ L S + K+++ + RA+ Q+YVDGF
Sbjct: 221 KVYWELTNQKFLVLEWLDGVPILTADLTQPPSDKDIAEKKKEITTLLFRAFFQQLYVDGF 280
Query: 288 FNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
F+ DPHPGN D R L+D G+ +L +Q L +M A + D
Sbjct: 281 FHADPHPGNIFYLAD--GRLALIDCGMVGRLDPRTRQLLTEMLLAIVDLD 328
>sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1770 PE=3 SV=1
Length = 585
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 173/351 (49%), Gaps = 22/351 (6%)
Query: 5 NIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGL 64
+I RRR+ ++ + + + ++ + L QR R AK + ++ L
Sbjct: 40 SITRRRIDIWGFVLTLLYQFWLNGKKWSYAGGYTEEKLQQR-RRRQAKWIRENLLSLGPT 98
Query: 65 WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVET 124
++K+GQ STR+D+ P Y+ L +LQD +P ++ + IE E G+ + ++ F
Sbjct: 99 FIKVGQLFSTRSDLFPAEYVEELSKLQDEVPAFSYEQAAGIIEEELGKPIAKLYRSFDPV 158
Query: 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWI----AWAEPQYD 180
PLA AS+ QVH+A L G VVVKVQ G+K + DL K I + W + D
Sbjct: 159 PLAAASLGQVHKAQLHTGEDVVVKVQRPGLKKLFTIDLAILKKIAQYFQNHPKWGRGR-D 217
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--Q 238
+N I +E CK +E D+ E + N + ED K +P V
Sbjct: 218 WNGIYEECCKILWQETDYLREGRSADTFRRNF----RGEDWVK---------VPRVYWRY 264
Query: 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFL 298
+S +L LE++ GI+++ ++LEA G+ ++++ + RAY Q+ GFF+ DPHPGN
Sbjct: 265 TSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGFFHADPHPGNLA 324
Query: 299 VSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
VS + I DFG+ +++ K L F AE + ++++ +G
Sbjct: 325 VSPEAGEL-IFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLVALG 374
>sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
laevis GN=adck1 PE=2 SV=1
Length = 520
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 18/298 (6%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A R+L+L G ++K+GQ+L+ ++P Y L L P P +V Q
Sbjct: 73 QVHLRSAHRLLDLCCFNRGTFIKVGQHLAALEYLVPPEYTKTLSVLHSQAPCTPFTDVVQ 132
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F +F +TPL AS+AQVHRA L DGR+V VKVQH ++ D+
Sbjct: 133 VIREDLGKEISEVFEEFEKTPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSSRDILI 192
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ ++ + PQ++F +I+E K P ELDF +E N +S+ + +
Sbjct: 193 MEVLLHVVKKIFPQFEFMWLIEEAKKNLPLELDFQNEGRNAEKMSSIVSSFS-------- 244
Query: 225 PAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282
+ IP + S++ VL++E+M+G ++ND E ++ ++ KV + + Y+ I
Sbjct: 245 -----FLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRNQIDVNKVSHALGKLYSEMI 299
Query: 283 YVDGFFNGDPHPGNFLVSKDPPH---RPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
+V GF + DPHPGN LV ++P + ILLD GL + L+ S + ++ A D
Sbjct: 300 FVHGFVHCDPHPGNVLVRQNPENCAPEIILLDHGLYQVLTESFRLDYCSLWQALIAAD 357
>sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
tropicalis GN=adck1 PE=2 SV=1
Length = 523
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 157/298 (52%), Gaps = 18/298 (6%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A R+L+L G ++K+GQ+L ++P Y L L P P +V Q
Sbjct: 73 QVHFRSAHRLLDLCCANRGTFIKVGQHLGALEYLVPPEYTKTLSVLHSQAPCTPFPDVVQ 132
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F++F E PL AS+AQVHRA L DGR+V VKVQH ++ D+
Sbjct: 133 VIREDLGKEISEVFVEFEEKPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSARDILL 192
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ ++ + PQ++F +I+E K P ELDF +E N +SA + +
Sbjct: 193 MEVLLHAVKKIFPQFEFMWLIEEAKKNLPLELDFENEGRNAEKMSAIVSSFS-------- 244
Query: 225 PAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282
+ IP + S++ VL++E+M+G ++ND E ++ ++ +V + + Y+ I
Sbjct: 245 -----FLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRNQIDINQVARALGQLYSEMI 299
Query: 283 YVDGFFNGDPHPGNFLVSKDPPH---RPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
+V GF + DPHPGN LV ++P ILLD GL + L+ S + ++ A D
Sbjct: 300 FVHGFVHCDPHPGNVLVRQNPETLVPEIILLDHGLYQVLTESFRLDYCSLWQALIAAD 357
>sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment)
OS=Clostridium pasteurianum PE=3 SV=1
Length = 530
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 159/290 (54%), Gaps = 18/290 (6%)
Query: 65 WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVET 124
++K+GQ LSTR D+LP PYI L +LQ+++PP ++ E ++ F+ F +T
Sbjct: 47 FIKIGQILSTRPDLLPLPYIKELSKLQNNVPPENFIDIENLFFEELSSTIDNTFLYFDKT 106
Query: 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDW--IAWAEPQYDFN 182
P+ +ASIAQVH A L DGR V+VK+Q GI ++ DL K +++ + + D
Sbjct: 107 PIGSASIAQVHDAILKDGRFVIVKIQRPGIAEMMKTDLSIIKKLLNITKTKFTDALIDPK 166
Query: 183 PIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSN-KKPAYEVDVLIPEVIQSSE 241
IDE +ELDF +E N + K +ED + Y +D L +E
Sbjct: 167 EAIDELFISTTQELDFINEINNIK------KFKKLNEDVKFVRTPYTIDKL------CTE 214
Query: 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK 301
++++E + GI++++ + L G + +++ +++T +Y Q++ DGFF+GDPHPGN L+ +
Sbjct: 215 KIIVMEKIVGIKIDNLKKLLNEGYDLEELGKKLTLSYFKQVFQDGFFHGDPHPGNLLIRE 274
Query: 302 DPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351
+ +DFG+ +S S+K +L A A D ++S +G++
Sbjct: 275 N---HICYIDFGIMGTISKSLKISLNDAILAVAYHDVNKMISVIMSIGVK 321
>sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0095 PE=3 SV=1
Length = 567
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 155/311 (49%), Gaps = 24/311 (7%)
Query: 49 RNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIER 108
R A+ ++ ++ L ++K+GQ LSTRAD++P YI QLQD +PP ++ IE+
Sbjct: 56 RRAQWLVQQLLYLGPTFIKIGQSLSTRADIIPAEYIEAFTQLQDRVPPFDSRQAIAVIEQ 115
Query: 109 EFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILED------- 161
E ++ +F F TPLA+AS+ QVHRA L G VVVKVQ G+ +++ D
Sbjct: 116 ELHGAIDEIFQQFEVTPLASASLGQVHRAVLPTGEAVVVKVQRPGLDSLLNLDFELLHQT 175
Query: 162 LKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDS 221
L+ AK + +Y+ I E+ E+D+ E +N N +
Sbjct: 176 LRLAKRWLPGFRRLAQKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQNFADYPR---- 231
Query: 222 NKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 279
V +PE+ ++ VL LE++ GI+++D ++LE G+N V++ AY
Sbjct: 232 ---------VRVPEIYWQYTTRMVLTLEYLPGIKVDDRQALETAGINLDLVIQTGICAYL 282
Query: 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHV 339
Q+ VDGFF DPHPGN V D I DFG ++ K + + FFA D
Sbjct: 283 KQLLVDGFFQSDPHPGNMAV--DSQGDLIFYDFGTMAEVKIIAKDQMVQTFFAVLRKDTN 340
Query: 340 ALLSAFAEMGL 350
+L A MGL
Sbjct: 341 QVLEALIYMGL 351
>sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium
discoideum GN=abkD PE=2 SV=1
Length = 695
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 170/336 (50%), Gaps = 29/336 (8%)
Query: 5 NIYRRRMSVFSMAILIYLDYKAV----QQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
N+ R A I ++YK + ++ ++++KSKI H+ +A +L+L +
Sbjct: 204 NVIVRFYRAMKCATKIMINYKILSYTPEKSSEYLEKSKI------CHQESADLILDLCLT 257
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
GL++K GQY+++ +LP Y L LQD P R EV ++ G + F D
Sbjct: 258 NGGLYIKAGQYIASLNHILPIQYTKTLSVLQDQAPWRDFYEVESVFLKDLGNAPNHYFSD 317
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
F P+A AS+AQVHRA +G +V VKVQ+ ++ D+ ++ + A P ++
Sbjct: 318 FDRLPIAAASLAQVHRAITKEGEEVAVKVQYVDLQRNFDGDIFTHNVLLTLVNMAFPDFE 377
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-- 238
FN + +E KELDF+ EA+N + +L N + IP+V +
Sbjct: 378 FNWMAEEMKNVLIKELDFSQEADNAERAAQDLSSNN-------------NAYIPKVFRPY 424
Query: 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFL 298
SS+ +L EF+ G ++N+ +++ + G++++ V + QI++ F + DPH GN L
Sbjct: 425 SSKRILTTEFIHGCKINNVQAIRSMGLSEKTVSQRFMEIMCEQIFIHAFVHVDPHAGNVL 484
Query: 299 VSKDP--PHRP--ILLDFGLTKKLSSSMKQALAKMF 330
V + P P++P +LLD GL ++ + ++
Sbjct: 485 VRQHPNHPNQPQIVLLDHGLYREYDEEFRLNFCNLY 520
>sp|Q54TR5|ABKB_DICDI Probable serine/threonine-protein kinase abkB OS=Dictyostelium
discoideum GN=abkB PE=3 SV=1
Length = 668
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 210/413 (50%), Gaps = 44/413 (10%)
Query: 44 QRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVS 103
Q AH+ AK +++L + +G+++K+ Q +++ +LP+ YI L QD P +EV
Sbjct: 238 QIAHKLAAKAMVDLCYQNKGIFIKVAQIIASLDHILPQEYIKSLSIFQDHAPFVTFEEVE 297
Query: 104 QTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIIL 159
+ + E G+ MF+DF P+ +AS+AQVH+A L + +V VKVQ+ G+
Sbjct: 298 KLFKIETGKHPDDMFIDFERLPINSASLAQVHKAKLKLENDEIIEVAVKVQYPGLMNKFQ 357
Query: 160 EDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHE 219
+D+ + +++ +I P + F+ I+ E +ELDF +EA+N+ + L N+
Sbjct: 358 KDMDSLDNVLTYITLFFPSFQFSWILGEASSCLSQELDFVNEAKNSEKMKQ-LFIGNQQ- 415
Query: 220 DSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277
+ IP+V +++ +L +EF+ G+R+++ E L+ G++ +++ +
Sbjct: 416 -----------LSIPKVYWNHTTKRILTMEFIHGVRIDNREGLDKLGIDLKELYYLFSDI 464
Query: 278 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFAAAE 335
+A QI+V GF + DPHPGN LV K P +P +LLD GL KK+ +++ ++ +
Sbjct: 465 FAQQIFVHGFLHSDPHPGNLLVRKTPNGKPDLVLLDHGLYKKIDENVRLDFCHLWKSLCL 524
Query: 336 GDHVALLSAF-AEMGLRLRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKV 394
GD A S F AE RL A + L + + E +K E + + L V
Sbjct: 525 GD--AKTSEFYAE-----RLGAGIYAKHLGILLNLNPSKSRENLRNMK--RELKDQTLVV 575
Query: 395 IQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMR 447
I E +K P +I++ + NL+R +++ + +L++ +
Sbjct: 576 INEILK-------------NLPKEILLVLKTNNLIRQITTHFGIENGFLNMAK 615
>sp|Q8Y275|UBIB_RALSO Probable ubiquinone biosynthesis protein UbiB OS=Ralstonia
solanacearum (strain GMI1000) GN=ubiB PE=3 SV=1
Length = 525
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 160/318 (50%), Gaps = 28/318 (8%)
Query: 39 ISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRP 98
+ L +R +R+ + +L ++VK GQ LSTR D+LP L +LQD +PP
Sbjct: 38 VLTLGRRQTRPRGERLRLALEQLGPIFVKFGQVLSTRRDLLPPDVADELAKLQDRVPPFD 97
Query: 99 VQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV----DGRQVVVKVQHQGI 154
+ + +ER G+ + +F F P+A+ASIAQVH ATL DGR+V VKV G+
Sbjct: 98 PKIAAAIVERSLGKPLSALFHRFDHHPVASASIAQVHFATLRGGPDDGREVAVKVLRPGM 157
Query: 155 KTIILEDLKNAKSIVDWIA--WAEPQYDFNP--IIDEWCKEAPKELDFNSEAENTRIVSA 210
+I DL + + W+ WA+ + P ++ E+ K ELD EA N +
Sbjct: 158 LPVIDSDLALMRDVATWMEKLWADGKR-LKPREVVAEFDKYLHDELDLMREAANASQLRR 216
Query: 211 NLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQ 268
N A +L+PEV + V ++E M G+R++ + L A GV+
Sbjct: 217 NF-------------AKSELLLVPEVFWDWCTSEVFVMERMHGVRVSHADELRAAGVDTH 263
Query: 269 KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQAL 326
K+ + + Q++ DGFF+ D HPGN LVS P R I LDFG+ LS K L
Sbjct: 264 KLARDGVEIFFTQVFRDGFFHADMHPGNILVSVAPESLGRYIALDFGIVGALSEFDKNYL 323
Query: 327 AKMFFAAAEGDH--VALL 342
A+ F A + D+ VALL
Sbjct: 324 AQNFLAFFQRDYHRVALL 341
>sp|B1XWR5|UBIB_LEPCP Probable ubiquinone biosynthesis protein UbiB OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB
PE=3 SV=1
Length = 522
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 20/309 (6%)
Query: 37 SKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPP 96
+++ ++ + HE R+ + +L ++VK GQ LSTR D++P + L +LQD +PP
Sbjct: 36 ARLMSIGRTHHEPRGVRLRMALERLGPIFVKFGQVLSTRRDLIPHDIANELAKLQDRVPP 95
Query: 97 RPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKT 156
P + + G + +F F P+A+ASIAQVH L DGR+V VKV +
Sbjct: 96 FPSDVSRAAVVQSLGRPIEEVFASFDADPVASASIAQVHFGVLHDGREVAVKVLRPNVLN 155
Query: 157 IILEDLKNAKSIVDWIAWAEPQ-YDFNP--IIDEWCKEAPKELDFNSEAENTRIVSANLG 213
II DL + W+ P P ++ E+ ELD EA N + N+G
Sbjct: 156 IIEADLALLRVAAAWLERLSPDGRRLRPREVVAEFDNYLHDELDLGREAANAAQLRRNMG 215
Query: 214 CKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271
+ +++PE+I SS VL++E M G+ ++ E+L A G++ K+
Sbjct: 216 GLDL-------------IMLPEMIWDLSSAEVLVMERMHGVPISQIETLRAAGIDIPKLA 262
Query: 272 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQALAKM 329
+ + Q++ DGFF+ D HPGN +VS P R I LDFG+ L S K+ LA+
Sbjct: 263 RDGVTIFFTQVFRDGFFHADMHPGNIMVSTAPATFGRYIALDFGIVGTLDSRDKEYLAQN 322
Query: 330 FFAAAEGDH 338
F A D+
Sbjct: 323 FLAFFRRDY 331
>sp|Q80V03|ADCK5_MOUSE Uncharacterized aarF domain-containing protein kinase 5 OS=Mus
musculus GN=Adck5 PE=2 SV=2
Length = 582
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 163/310 (52%), Gaps = 17/310 (5%)
Query: 46 AHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQT 105
H+R A ++ I+ GL+VKLGQ L + +LP YI L+ L+D R +EV +
Sbjct: 126 CHQRAADALVAGAIRNGGLYVKLGQGLCSFNHLLPTEYIQTLRVLEDKALTRGFREVDEL 185
Query: 106 IEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNA 165
+F +F +F P+A AS+AQVHRA L DG V VKVQ+ ++ D++
Sbjct: 186 FLEDFQALPNELFQEFDYEPMAAASLAQVHRAKLHDGTDVAVKVQYIDLRDRFDGDVQTL 245
Query: 166 KSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKP 225
+ ++ + P + F+ ++ + +ELDF +E N + L K+ H
Sbjct: 246 ELLLRLVELMHPSFGFSWVLQDLKGTLVQELDFENEGRNAERCAQEL--KHFHY------ 297
Query: 226 AYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283
V+IP V +SS+ VL +F +G ++ND E +++ G+ Q V +++ + +A QI+
Sbjct: 298 -----VVIPRVHWDRSSKRVLTADFCNGCKVNDMEGIKSQGLAVQDVAKKLIQTFAEQIF 352
Query: 284 VDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVAL 341
GF + DPHPGN LV K P + +LLD GL + L + +L +++ A D+ A+
Sbjct: 353 HTGFIHSDPHPGNVLVRKGPDGKAELVLLDHGLYQFLDEKDRSSLCQLWRAIILRDNAAM 412
Query: 342 LSAFAEMGLR 351
A +G++
Sbjct: 413 KKHAAALGVQ 422
>sp|Q9K0N0|UBIB_NEIMB Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup B (strain MC58) GN=ubiB PE=3 SV=1
Length = 503
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 179/355 (50%), Gaps = 36/355 (10%)
Query: 4 GNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEG 63
G YR R++ +++ WI + + + Q + +N + L + LE
Sbjct: 12 GTFYRYRLAGLCASLM----------GSGWIC-ALLKMMPQSSKLKNEPPAVRLRLALES 60
Query: 64 L---WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
L ++K GQ LSTR D++P Y L +LQD +PP + + IE+ G+S+ ++ +
Sbjct: 61 LGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEKLYAE 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA--WAEPQ 178
F P+A+ASIAQVH+A L G QV VKV + +I +DL + W+ +A+ +
Sbjct: 121 FETEPIASASIAQVHKARLHSGEQVAVKVLRPNLLPVIEQDLSLMRFGAGWVERLFADGK 180
Query: 179 YDFNP--IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 236
P ++ E+ K ELD EA N ++ LG ++ D +++P+V
Sbjct: 181 R-LKPREVVAEFDKYLHDELDLMREAAN----ASQLGRNFQNSDM---------LIVPKV 226
Query: 237 I--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHP 294
+ VL +E+MDG ++D L+A G++ K+ + + Q++ DGFF+ D HP
Sbjct: 227 FYDYCTSDVLTIEWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHP 286
Query: 295 GNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
GN LV+ D +R I LDFG+ L+ K+ LA F A D+ + +A E G
Sbjct: 287 GNILVAAD--NRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESG 339
>sp|Q9PCE8|UBIB_XYLFA Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain 9a5c) GN=ubiB PE=3 SV=1
Length = 552
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 164/331 (49%), Gaps = 25/331 (7%)
Query: 31 EKWIKKSK--ISALWQRAHERNAKRVLNLIIKLEG-LWVKLGQYLSTRADVLPEPYISLL 87
E+W++ +K + + E++ R L L ++ G ++VK GQ LSTR D++P+ L
Sbjct: 29 ERWLRLAKPFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRDLVPQDIGDEL 88
Query: 88 KQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVV 147
LQD + P Q IE G+S+ F F PLA+ASI+QVH ATL DGR+VVV
Sbjct: 89 VMLQDRVEPFEGQTARIIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDGREVVV 148
Query: 148 KVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD-FNP--IIDEWCKEAPKELDFNSEAEN 204
KV I+ I +D+ KS+ + P D P I+ E ELD E N
Sbjct: 149 KVLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPCEIVAEIETTLAAELDLQREGAN 208
Query: 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEA 262
++ + E S+ D+ +PEVI ++E VL LE M GI +D L+A
Sbjct: 209 ASVL------RRFWEASD-------DIYVPEVIWSHTAEQVLTLERMYGIPSDDIALLDA 255
Query: 263 FGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH----RPILLDFGLTKKL 318
G++++ + + R + Q++ D FF+ D H GN V DP R I LDFG+ +L
Sbjct: 256 SGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSNPRFIALDFGIMGQL 315
Query: 319 SSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
S + LA+ F A D+ + E G
Sbjct: 316 SQKDQYYLAENFMAIFHKDYRRIAELHVEAG 346
>sp|Q3MIX3|ADCK5_HUMAN Uncharacterized aarF domain-containing protein kinase 5 OS=Homo
sapiens GN=ADCK5 PE=2 SV=2
Length = 580
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 150/291 (51%), Gaps = 17/291 (5%)
Query: 46 AHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQT 105
H+R A ++ I GL+VKLGQ L + +LP Y L+ L+D R QEV +
Sbjct: 126 CHQRAADALVAGAISNGGLYVKLGQGLCSFNHLLPPEYTRTLRVLEDRALKRGFQEVDEL 185
Query: 106 IEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNA 165
+F +F +F P+A AS+AQVHRA L DG V VKVQ+ ++ D+
Sbjct: 186 FLEDFQALPHELFQEFDYQPIAAASLAQVHRAKLHDGTSVAVKVQYIDLRDRFDGDIHTL 245
Query: 166 KSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKP 225
+ ++ + P + F+ ++ + +ELDF +E N E ++
Sbjct: 246 ELLLRLVEVMHPSFGFSWVLQDLKGTLAQELDFENEGRNA-------------ERCAREL 292
Query: 226 AYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283
A+ V++P V +SS+ VL +F G ++ND E++ + G+ + E++ +A+A QI+
Sbjct: 293 AHFPYVVVPRVHWDKSSKRVLTADFCAGCKVNDVEAIRSQGLAVHDIAEKLIKAFAEQIF 352
Query: 284 VDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFA 332
GF + DPHPGN LV K P + +LLD GL + L + AL +++ A
Sbjct: 353 YTGFIHSDPHPGNVLVRKGPDGKAELVLLDHGLYQFLEEKDRAALCQLWRA 403
>sp|Q87CN1|UBIB_XYLFT Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=ubiB PE=3 SV=1
Length = 552
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 167/340 (49%), Gaps = 28/340 (8%)
Query: 22 LDYKAVQQREKWIKKSK--ISALWQRAHERNAKRVLNLIIKLEG-LWVKLGQYLSTRADV 78
LD AV E+W++ +K + + E++ R L L ++ G ++VK GQ LSTR D+
Sbjct: 23 LDGTAV---ERWLRLAKPFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRDL 79
Query: 79 LPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRAT 138
+P+ L LQD + P Q IE G+S+ F F PLA+ASI+QVH AT
Sbjct: 80 VPQDIGDELVMLQDRVEPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAAT 139
Query: 139 LVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD-FNP--IIDEWCKEAPKE 195
L D R VVVKV I+ I +D+ KS+ + P D P I+ E E
Sbjct: 140 LHDRRAVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPREIVAEIETTLAAE 199
Query: 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIR 253
LD E N ++ + E S+ D+ +PEVI ++E VL LE M GI
Sbjct: 200 LDLQREGANASVL------RRFWEASD-------DIYVPEVIWSHTAERVLTLERMYGIP 246
Query: 254 LNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH----RPIL 309
+D L+A G++++ + + R + Q++ D FF+ D H GN V DP R I+
Sbjct: 247 SDDIALLDASGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSNPRFIV 306
Query: 310 LDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
LDFG+ +LS + LA+ F A D+ + E G
Sbjct: 307 LDFGIMGQLSQKDQYYLAENFMAIFHKDYRRIAELHVEAG 346
>sp|B2I583|UBIB_XYLF2 Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M23) GN=ubiB PE=3 SV=1
Length = 552
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 167/340 (49%), Gaps = 28/340 (8%)
Query: 22 LDYKAVQQREKWIKKSK--ISALWQRAHERNAKRVLNLIIKLEG-LWVKLGQYLSTRADV 78
LD AV E+W++ +K + + E++ R L L ++ G ++VK GQ LSTR D+
Sbjct: 23 LDGTAV---ERWLRLAKPFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRDL 79
Query: 79 LPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRAT 138
+P+ L LQD + P Q IE G+S+ F F PLA+ASI+QVH AT
Sbjct: 80 VPQDIGDELVMLQDRVEPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAAT 139
Query: 139 LVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD-FNP--IIDEWCKEAPKE 195
L D R VVVKV I+ I +D+ KS+ + P D P I+ E E
Sbjct: 140 LHDRRAVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPREIVAEIETTLAAE 199
Query: 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIR 253
LD E N ++ + E S+ D+ +PEVI ++E VL LE M GI
Sbjct: 200 LDLQREGANASVL------RRFWEASD-------DIYVPEVIWSHTAERVLTLERMYGIP 246
Query: 254 LNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH----RPIL 309
+D L+A G++++ + + R + Q++ D FF+ D H GN V DP R I+
Sbjct: 247 SDDIALLDASGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSNPRFIV 306
Query: 310 LDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
LDFG+ +LS + LA+ F A D+ + E G
Sbjct: 307 LDFGIMGQLSQKDQYYLAENFMAIFHKDYRRIAELHVEAG 346
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1
Length = 508
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 153/309 (49%), Gaps = 27/309 (8%)
Query: 52 KRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFG 111
+RV + L ++VK GQ LSTR D+LP Y L LQD +PP Q +ER G
Sbjct: 50 QRVRLALESLGPIFVKFGQVLSTRRDLLPPEYADELALLQDRVPPFDGDIARQVVERSLG 109
Query: 112 ESMGGMFMDFVETPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAK 166
+ +F+DF P+A+AS+AQVH+A L GR+V VKV GI +I +DL +
Sbjct: 110 RKVEELFVDFDLKPVASASVAQVHKAWLRQPDGGRGREVAVKVLRPGILPVIEQDLSLMR 169
Query: 167 SIVDWIA--WAEPQYDFNP--IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSN 222
++ W+ +A+ + P ++ E+ K ELD EA N + N +
Sbjct: 170 TLAGWVEKLFADGKR-LKPREVVAEFDKYLHDELDMMHEAANASQLRRNFKGSDM----- 223
Query: 223 KKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280
+++PEV SS VL LE+M GI + E L GV+ QK+ +
Sbjct: 224 --------LIVPEVFYDYSSREVLTLEWMHGIPVGQIERLREAGVDLQKLSRFGVEIFFT 275
Query: 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVA 340
Q++ GFF+ D HPGN V+ D R I LDFG+ L+ + K LA F A D+
Sbjct: 276 QVFRHGFFHADMHPGNIFVAAD--GRYIALDFGIVGSLTDTDKHYLAVNFLAFFNRDYHR 333
Query: 341 LLSAFAEMG 349
+ +A E G
Sbjct: 334 VATAHIESG 342
>sp|Q9JVQ5|UBIB_NEIMA Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=ubiB PE=3 SV=1
Length = 503
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 178/357 (49%), Gaps = 40/357 (11%)
Query: 4 GNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEG 63
G YR R++ +++ WI + + + Q + +N + L + LE
Sbjct: 12 GTFYRYRLAGLCASLM----------GSGWIC-ALLKMMPQSSKLKNEPPAVRLRLALES 60
Query: 64 L---WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
L ++K GQ LSTR D++P Y L +LQD +PP + + IE+ G+S+ ++ +
Sbjct: 61 LGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEKLYAE 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
F P+A+ASIAQVH+A L G +V VKV + +I +DL + AW E +
Sbjct: 121 FETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQDLSLMRFGA---AWVERLFS 177
Query: 181 ----FNP--IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIP 234
P ++ E+ K ELD EA N + LG +N H +SN +++P
Sbjct: 178 DGRRLKPLEVVAEFDKYLHDELDLMREAAN----AGQLG-RNFH-NSNM-------LIVP 224
Query: 235 EVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDP 292
+V + VL +E+MDG + D L+A G++ K+ + + Q++ DGFF+ D
Sbjct: 225 KVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADM 284
Query: 293 HPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
HPGN LV+ D +R I LDFG+ L+ K+ LA F A D+ + +A E G
Sbjct: 285 HPGNILVAAD--NRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESG 339
>sp|B0U2R2|UBIB_XYLFM Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M12) GN=ubiB PE=3 SV=1
Length = 552
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 163/331 (49%), Gaps = 25/331 (7%)
Query: 31 EKWIKKSK--ISALWQRAHERNAKRVLNLIIKLEG-LWVKLGQYLSTRADVLPEPYISLL 87
E+W++ +K + + E++ R L L ++ G ++VK GQ LSTR D++P+ L
Sbjct: 29 ERWLRLAKPFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRDLVPQDIGDEL 88
Query: 88 KQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVV 147
LQD + P Q IE G+S+ F F PLA+ASI+QVH ATL D R+VVV
Sbjct: 89 VMLQDRVEPFEGQTARIIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRREVVV 148
Query: 148 KVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD-FNP--IIDEWCKEAPKELDFNSEAEN 204
KV I+ I +D+ KS+ + P D P I+ E ELD E N
Sbjct: 149 KVLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPREIVAEIETTLAAELDLQREGAN 208
Query: 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEA 262
++ + E S+ D+ +PEVI ++E VL LE M GI +D L+A
Sbjct: 209 ASVL------RRFWEASD-------DIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDA 255
Query: 263 FGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH----RPILLDFGLTKKL 318
G++++ + + R + Q++ D FF+ D H GN V DP R I LDFG+ +L
Sbjct: 256 SGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSNPRFIALDFGIMGQL 315
Query: 319 SSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
S + LA+ F A D+ + E G
Sbjct: 316 SQKDQYYLAENFMAIFHKDYRRIAELHVEAG 346
>sp|A0KEF8|UBIB_AERHH Probable ubiquinone biosynthesis protein UbiB OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=ubiB PE=3 SV=1
Length = 546
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 171/355 (48%), Gaps = 25/355 (7%)
Query: 7 YRRRMSVFSMAILIYLDYKAVQQREKWIKK-SKISALWQRAHERNAKRVLNLIIKLEGL- 64
++R + S+ + +D + + W + ++ S W + + R + + E L
Sbjct: 6 FKRLYRIISILLEQGIDELVPARYQPWPGRLARRSLFWLKNKRQGLNRGARIRLAFEALG 65
Query: 65 --WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFV 122
++K GQ LSTR D+LP L LQD +PP Q + IE G ++ +F DF
Sbjct: 66 PIFIKFGQMLSTRRDLLPPDIAEELALLQDRVPPFCGQAARRQIEASLGCTIETLFDDFD 125
Query: 123 ETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD- 180
ETPLA+ASIAQVH A L + GR++V+KV I+ +I DL+ +++ +A PQ
Sbjct: 126 ETPLASASIAQVHTARLKENGREIVIKVIRPDIEPVIEADLRLMQALARLVARFVPQSGR 185
Query: 181 FNPI--IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI- 237
PI ++E+ K EL+ EA N + N + +PEV
Sbjct: 186 LRPIEVVEEYRKTILDELNLMREAANAIQLRRNFTGSEA-------------LYVPEVFT 232
Query: 238 -QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 296
E VL++E + GI ++D +LEA G N + + E + Q++ D FF+ D HPGN
Sbjct: 233 EHCREQVLVMERIYGIPVSDIAALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPGN 292
Query: 297 FLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
VS + P P I +D G+ L+ K+ LA+ F A D+ + E G
Sbjct: 293 IFVSYEHPENPLWIGIDCGIVGTLNREDKRYLAENFLAFFNRDYRRVAELHVESG 347
>sp|Q63X97|UBIB_BURPS Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain K96243) GN=ubiB PE=3 SV=1
Length = 525
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 160/324 (49%), Gaps = 26/324 (8%)
Query: 38 KISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPR 97
+I+ + +R + A R+ + L ++VK GQ LSTR D+LP + + L +LQD +PP
Sbjct: 36 RITTIGRRFADPPAVRLRRALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPF 95
Query: 98 PVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD----GRQVVVKVQHQG 153
+E+ G + +F +F P+A+ASIAQVH A L G+ V VKV
Sbjct: 96 DSAVAIAIVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPN 155
Query: 154 IKTIILEDLKNAKSIVDWIA--WAEPQYDFNP--IIDEWCKEAPKELDFNSEAENTRIVS 209
+ +I DL + I W WA+ + P ++ E+ K ELD EA N +
Sbjct: 156 MLPVIDSDLALMRDIATWAERLWADGRR-LKPREVVAEFDKYLHDELDLMREAANGSQLR 214
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNK 267
N + +L+PE+ S+ VL++E M G+ ++ ++L A GV+
Sbjct: 215 RNFAGLDL-------------LLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDI 261
Query: 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQA 325
K+ E + Q++ DGFF+ D HPGN VS DP H R I LDFG+ LS K
Sbjct: 262 PKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNY 321
Query: 326 LAKMFFAAAEGDHVALLSAFAEMG 349
LA+ F A + D+ + + E G
Sbjct: 322 LAQNFLAFFKRDYHRVATLHLESG 345
>sp|A3N5V1|UBIB_BURP6 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 668) GN=ubiB PE=3 SV=1
Length = 525
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 160/324 (49%), Gaps = 26/324 (8%)
Query: 38 KISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPR 97
+I+ + +R + A R+ + L ++VK GQ LSTR D+LP + + L +LQD +PP
Sbjct: 36 RITTIGRRFADPPAVRLRRALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPF 95
Query: 98 PVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD----GRQVVVKVQHQG 153
+E+ G + +F +F P+A+ASIAQVH A L G+ V VKV
Sbjct: 96 DSAVAIAIVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPN 155
Query: 154 IKTIILEDLKNAKSIVDWIA--WAEPQYDFNP--IIDEWCKEAPKELDFNSEAENTRIVS 209
+ +I DL + I W WA+ + P ++ E+ K ELD EA N +
Sbjct: 156 MLPVIDSDLALMRDIATWAERLWADGRR-LKPREVVAEFDKYLHDELDLMREAANGSQLR 214
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNK 267
N + +L+PE+ S+ VL++E M G+ ++ ++L A GV+
Sbjct: 215 RNFAGLDL-------------LLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDI 261
Query: 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQA 325
K+ E + Q++ DGFF+ D HPGN VS DP H R I LDFG+ LS K
Sbjct: 262 PKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNY 321
Query: 326 LAKMFFAAAEGDHVALLSAFAEMG 349
LA+ F A + D+ + + E G
Sbjct: 322 LAQNFLAFFKRDYHRVATLHLESG 345
>sp|Q3JVZ2|UBIB_BURP1 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 1710b) GN=ubiB PE=3 SV=1
Length = 525
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 160/324 (49%), Gaps = 26/324 (8%)
Query: 38 KISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPR 97
+I+ + +R + A R+ + L ++VK GQ LSTR D+LP + + L +LQD +PP
Sbjct: 36 RITTIGRRFADPPAVRLRRALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPF 95
Query: 98 PVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD----GRQVVVKVQHQG 153
+E+ G + +F +F P+A+ASIAQVH A L G+ V VKV
Sbjct: 96 DSAVAIAIVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPN 155
Query: 154 IKTIILEDLKNAKSIVDWIA--WAEPQYDFNP--IIDEWCKEAPKELDFNSEAENTRIVS 209
+ +I DL + I W WA+ + P ++ E+ K ELD EA N +
Sbjct: 156 MLPVIDSDLALMRDIATWAERLWADGRR-LKPREVVAEFDKYLHDELDLMREAANGSQLR 214
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNK 267
N + +L+PE+ S+ VL++E M G+ ++ ++L A GV+
Sbjct: 215 RNFAGLDL-------------LLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDI 261
Query: 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQA 325
K+ E + Q++ DGFF+ D HPGN VS DP H R I LDFG+ LS K
Sbjct: 262 PKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNY 321
Query: 326 LAKMFFAAAEGDHVALLSAFAEMG 349
LA+ F A + D+ + + E G
Sbjct: 322 LAQNFLAFFKRDYHRVATLHLESG 345
>sp|A3NRJ7|UBIB_BURP0 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 1106a) GN=ubiB PE=3 SV=1
Length = 525
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 160/324 (49%), Gaps = 26/324 (8%)
Query: 38 KISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPR 97
+I+ + +R + A R+ + L ++VK GQ LSTR D+LP + + L +LQD +PP
Sbjct: 36 RITTIGRRFADPPAVRLRRALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPF 95
Query: 98 PVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD----GRQVVVKVQHQG 153
+E+ G + +F +F P+A+ASIAQVH A L G+ V VKV
Sbjct: 96 DSAVAIAIVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPN 155
Query: 154 IKTIILEDLKNAKSIVDWIA--WAEPQYDFNP--IIDEWCKEAPKELDFNSEAENTRIVS 209
+ +I DL + I W WA+ + P ++ E+ K ELD EA N +
Sbjct: 156 MLPVIDSDLALMRDIATWAERLWADGRR-LKPREVVAEFDKYLHDELDLMREAANGSQLR 214
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNK 267
N + +L+PE+ S+ VL++E M G+ ++ ++L A GV+
Sbjct: 215 RNFAGLDL-------------LLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDI 261
Query: 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQA 325
K+ E + Q++ DGFF+ D HPGN VS DP H R I LDFG+ LS K
Sbjct: 262 PKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNY 321
Query: 326 LAKMFFAAAEGDHVALLSAFAEMG 349
LA+ F A + D+ + + E G
Sbjct: 322 LAQNFLAFFKRDYHRVATLHLESG 345
>sp|A1V750|UBIB_BURMS Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain SAVP1) GN=ubiB PE=3 SV=1
Length = 525
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 160/324 (49%), Gaps = 26/324 (8%)
Query: 38 KISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPR 97
+I+ + +R + A R+ + L ++VK GQ LSTR D+LP + + L +LQD +PP
Sbjct: 36 RITTIGRRFADPPAVRLRRALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPF 95
Query: 98 PVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD----GRQVVVKVQHQG 153
+E+ G + +F +F P+A+ASIAQVH A L G+ V VKV
Sbjct: 96 DSAVAIAIVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPN 155
Query: 154 IKTIILEDLKNAKSIVDWIA--WAEPQYDFNP--IIDEWCKEAPKELDFNSEAENTRIVS 209
+ +I DL + I W WA+ + P ++ E+ K ELD EA N +
Sbjct: 156 MLPVIDSDLALMRDIATWAERLWADGRR-LKPREVVAEFDKYLHDELDLMREAANGSQLR 214
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNK 267
N + +L+PE+ S+ VL++E M G+ ++ ++L A GV+
Sbjct: 215 RNFAGLDL-------------LLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDI 261
Query: 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQA 325
K+ E + Q++ DGFF+ D HPGN VS DP H R I LDFG+ LS K
Sbjct: 262 PKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNY 321
Query: 326 LAKMFFAAAEGDHVALLSAFAEMG 349
LA+ F A + D+ + + E G
Sbjct: 322 LAQNFLAFFKRDYHRVATLHLESG 345
>sp|Q62MP2|UBIB_BURMA Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain ATCC 23344) GN=ubiB PE=3 SV=1
Length = 525
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 160/324 (49%), Gaps = 26/324 (8%)
Query: 38 KISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPR 97
+I+ + +R + A R+ + L ++VK GQ LSTR D+LP + + L +LQD +PP
Sbjct: 36 RITTIGRRFADPPAVRLRRALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPF 95
Query: 98 PVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD----GRQVVVKVQHQG 153
+E+ G + +F +F P+A+ASIAQVH A L G+ V VKV
Sbjct: 96 DSAVAIAIVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPN 155
Query: 154 IKTIILEDLKNAKSIVDWIA--WAEPQYDFNP--IIDEWCKEAPKELDFNSEAENTRIVS 209
+ +I DL + I W WA+ + P ++ E+ K ELD EA N +
Sbjct: 156 MLPVIDSDLALMRDIATWAERLWADGRR-LKPREVVAEFDKYLHDELDLMREAANGSQLR 214
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNK 267
N + +L+PE+ S+ VL++E M G+ ++ ++L A GV+
Sbjct: 215 RNFAGLDL-------------LLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDI 261
Query: 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQA 325
K+ E + Q++ DGFF+ D HPGN VS DP H R I LDFG+ LS K
Sbjct: 262 PKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNY 321
Query: 326 LAKMFFAAAEGDHVALLSAFAEMG 349
LA+ F A + D+ + + E G
Sbjct: 322 LAQNFLAFFKRDYHRVATLHLESG 345
>sp|A2S8L4|UBIB_BURM9 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain NCTC 10229) GN=ubiB PE=3 SV=1
Length = 525
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 160/324 (49%), Gaps = 26/324 (8%)
Query: 38 KISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPR 97
+I+ + +R + A R+ + L ++VK GQ LSTR D+LP + + L +LQD +PP
Sbjct: 36 RITTIGRRFADPPAVRLRRALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPF 95
Query: 98 PVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD----GRQVVVKVQHQG 153
+E+ G + +F +F P+A+ASIAQVH A L G+ V VKV
Sbjct: 96 DSAVAIAIVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPN 155
Query: 154 IKTIILEDLKNAKSIVDWIA--WAEPQYDFNP--IIDEWCKEAPKELDFNSEAENTRIVS 209
+ +I DL + I W WA+ + P ++ E+ K ELD EA N +
Sbjct: 156 MLPVIDSDLALMRDIATWAERLWADGRR-LKPREVVAEFDKYLHDELDLMREAANGSQLR 214
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNK 267
N + +L+PE+ S+ VL++E M G+ ++ ++L A GV+
Sbjct: 215 RNFAGLDL-------------LLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDI 261
Query: 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQA 325
K+ E + Q++ DGFF+ D HPGN VS DP H R I LDFG+ LS K
Sbjct: 262 PKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNY 321
Query: 326 LAKMFFAAAEGDHVALLSAFAEMG 349
LA+ F A + D+ + + E G
Sbjct: 322 LAQNFLAFFKRDYHRVATLHLESG 345
>sp|A3MNU1|UBIB_BURM7 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain NCTC 10247) GN=ubiB PE=3 SV=1
Length = 525
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 160/324 (49%), Gaps = 26/324 (8%)
Query: 38 KISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPR 97
+I+ + +R + A R+ + L ++VK GQ LSTR D+LP + + L +LQD +PP
Sbjct: 36 RITTIGRRFADPPAVRLRRALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPF 95
Query: 98 PVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD----GRQVVVKVQHQG 153
+E+ G + +F +F P+A+ASIAQVH A L G+ V VKV
Sbjct: 96 DSAVAIAIVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPN 155
Query: 154 IKTIILEDLKNAKSIVDWIA--WAEPQYDFNP--IIDEWCKEAPKELDFNSEAENTRIVS 209
+ +I DL + I W WA+ + P ++ E+ K ELD EA N +
Sbjct: 156 MLPVIDSDLALMRDIATWAERLWADGRR-LKPREVVAEFDKYLHDELDLMREAANGSQLR 214
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNK 267
N + +L+PE+ S+ VL++E M G+ ++ ++L A GV+
Sbjct: 215 RNFAGLDL-------------LLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDI 261
Query: 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQA 325
K+ E + Q++ DGFF+ D HPGN VS DP H R I LDFG+ LS K
Sbjct: 262 PKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNY 321
Query: 326 LAKMFFAAAEGDHVALLSAFAEMG 349
LA+ F A + D+ + + E G
Sbjct: 322 LAQNFLAFFKRDYHRVATLHLESG 345
>sp|C5CWY2|UBIB_VARPS Probable ubiquinone biosynthesis protein UbiB OS=Variovorax
paradoxus (strain S110) GN=ubiB PE=3 SV=1
Length = 521
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 25/318 (7%)
Query: 33 WIKK-SKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQ 91
W++ ++I ++ + +R+ + +L ++VK GQ LSTR D+LP L LQ
Sbjct: 31 WLRVVARIVSIGRNLDAPRGQRLREALERLGPIFVKFGQVLSTRRDLLPPDIADELAFLQ 90
Query: 92 DSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV----DGRQVVV 147
D +PP P TIER F +G +F+ F ETP+A+ASIAQVH AT+ + R+V V
Sbjct: 91 DRVPPFPSAVAIATIERAFRRPVGDVFVQFDETPIASASIAQVHFATIRTDEGEVREVAV 150
Query: 148 KVQHQGIKTIILEDLKNAKSIVDWIAWAEP---QYDFNPIIDEWCKEAPKELDFNSEAEN 204
KV ++ +I +DL + W+ P + ++ E+ K ELD EA N
Sbjct: 151 KVLRPSMRGVIEKDLALMAMMAGWVEKLSPDGKRLKPREVVGEFDKYLHDELDLVREAAN 210
Query: 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA 262
+ N+ VLIPE+ V+++E M+G+ + + L A
Sbjct: 211 AAQLRRNMASLEL-------------VLIPEMFWDFCHPEVIVMERMNGVPIAQLDRLRA 257
Query: 263 FGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSS 320
GV+ K+ + + Q++ DGFF+ D HPGN VS P R I LDFG+ L+
Sbjct: 258 AGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGRYISLDFGIIGTLTE 317
Query: 321 SMKQALAKMFFAAAEGDH 338
S K+ LA+ F A D+
Sbjct: 318 SDKEYLAQNFVAFFRRDY 335
>sp|O04212|Y2090_ARATH Putative ABC1 protein At2g40090 OS=Arabidopsis thaliana
GN=At2g40090 PE=2 SV=2
Length = 538
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 176/353 (49%), Gaps = 24/353 (6%)
Query: 10 RMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGLWVKLG 69
R +V + +I +Y + E +++K+ H R+A+++ L K G+++KLG
Sbjct: 51 RNTVTAASIAFDYEYSLLGLAEGSSERAKVK---HEVHLRSAQKLQELCFKNGGIYIKLG 107
Query: 70 QYLSTRADVLPEPYISLLKQ-LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLAT 128
Q++ ++PE Y+ +++ + + P ++V + ++E GE +F +F P+A+
Sbjct: 108 QHIGQLEYLVPEEYVRTMRESMLNKCPISSYEQVCEVFKKEVGEMPDQVFAEFDPVPIAS 167
Query: 129 ASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 188
AS+AQVH A DG++V VKVQH + D +V+ + P +D+ ++DE
Sbjct: 168 ASLAQVHVARTHDGKKVAVKVQHAHMTDTAAADTAAVGVLVNTLHRIFPSFDYRWLLDEM 227
Query: 189 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLIL 246
+ PKELDF EA+N N C + + P V P + S+ +L +
Sbjct: 228 SESLPKELDFLVEAKN------NEKCLDNFRKLS--PHIAEYVYAPTIYWNLSTSKLLTM 279
Query: 247 EFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPP-- 304
EFMDG ++ND + + G+ +V + +++ +A ++ GF + DPH N +V DP
Sbjct: 280 EFMDGAQVNDVDKIRKLGIQPYEVSKLVSQTFAEMMFKHGFVHCDPHAANLIVRPDPSGK 339
Query: 305 ------HRP--ILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
+P ++LD GL K+L + + A ++ A D A+ ++G
Sbjct: 340 RNIYGKRKPQLVILDHGLYKELDFNTRFNYASLWKALVFSDAKAIKEHSEKLG 392
>sp|A9BP42|UBIB_DELAS Probable ubiquinone biosynthesis protein UbiB OS=Delftia
acidovorans (strain DSM 14801 / SPH-1) GN=ubiB PE=3 SV=1
Length = 521
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 162/329 (49%), Gaps = 25/329 (7%)
Query: 33 WIKKSK-ISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQ 91
W+++++ + L +R + +R+ + +L ++VK GQ LSTR+D++P L +LQ
Sbjct: 31 WMRRARAVLTLGRRLDKPRGQRLREALEELGPIFVKFGQVLSTRSDLMPPDVAEELARLQ 90
Query: 92 DSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD----GRQVVV 147
D +PP Q TIER F + + +F+ F P+A+ASIAQVH A + D R V V
Sbjct: 91 DRVPPFDSQIAVDTIERAFRKKLDQIFVSFEREPVASASIAQVHFAVISDRNGVQRDVAV 150
Query: 148 KVQHQGIKTIILEDLKNAKSIVDWIAWAEP---QYDFNPIIDEWCKEAPKELDFNSEAEN 204
KV G+KT+I +DL + W+ + ++ E+ ELD EA N
Sbjct: 151 KVLRPGMKTVIDKDLALMHMMARWVERLSADGKRLKPRQVVAEFDNYLHDELDLIREASN 210
Query: 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS--SETVLILEFMDGIRLNDCESLEA 262
+ N+ + VLIPEV V++++ M G+ ++ E L
Sbjct: 211 AAQLRRNMEGLDL-------------VLIPEVYWDFCRSDVMVMQRMTGVPISQVERLRE 257
Query: 263 FGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSS 320
GV+ K+ + + Q++ DGFF+ D HPGN +VS +P R I LDFG+ L+
Sbjct: 258 AGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIMVSLEPETFGRYISLDFGIVGTLTE 317
Query: 321 SMKQALAKMFFAAAEGDHVALLSAFAEMG 349
K+ LA+ F A D+ + E G
Sbjct: 318 YDKEYLAQNFTAFFRRDYKRVAELHIESG 346
>sp|A4STK9|UBIB_AERS4 Probable ubiquinone biosynthesis protein UbiB OS=Aeromonas
salmonicida (strain A449) GN=ubiB PE=3 SV=1
Length = 546
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 157/324 (48%), Gaps = 24/324 (7%)
Query: 37 SKISALWQRAHERNAKRVLNLIIKLEGL---WVKLGQYLSTRADVLPEPYISLLKQLQDS 93
++ S W + + + R + + E L ++K GQ LSTR D+LP L LQD
Sbjct: 37 ARRSLFWLKKKQPDLSRGARIRLAFEALGPIFIKFGQMLSTRRDLLPPDIAEELAMLQDR 96
Query: 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD-GRQVVVKVQHQ 152
+PP Q IE G + +F DF ETPLA+ASIAQVH L + GR++V+KV
Sbjct: 97 VPPFCGQAARLKIEESLGCPVETLFDDFDETPLASASIAQVHTGRLKENGREIVIKVIRP 156
Query: 153 GIKTIILEDLKNAKSIVDWIAWAEPQ-YDFNPI--IDEWCKEAPKELDFNSEAENTRIVS 209
I+ +I DL+ +++ +A PQ PI ++E+ K EL+ EA N +
Sbjct: 157 DIEPVIEADLRLMQTLARLVARFVPQSARLRPIEVVEEYRKTILDELNLMREAANAIQLR 216
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNK 267
N + + +PEV E VL++E + GI ++D +LEA G N
Sbjct: 217 RNFTGSDA-------------LYVPEVFTEHCREHVLVMERIYGIPVSDIPALEANGTNM 263
Query: 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQA 325
+ + E + Q++ D FF+ D HPGN VS + P P I +D G+ L+ K+
Sbjct: 264 KLLAERGVEVFFTQVFRDSFFHADMHPGNIFVSYEHPDNPLWIGIDCGIVGTLNREDKRY 323
Query: 326 LAKMFFAAAEGDHVALLSAFAEMG 349
LA+ F A D+ + E G
Sbjct: 324 LAENFLAFFNRDYRRVAELHVESG 347
>sp|A1U669|UBIB_MARAV Probable ubiquinone biosynthesis protein UbiB OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiB
PE=3 SV=1
Length = 547
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 150/287 (52%), Gaps = 22/287 (7%)
Query: 60 KLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFM 119
+L ++VK GQ LSTR D+LP+ LKQLQD +PP P ++ IE+ G + +F
Sbjct: 61 ELGPVFVKFGQILSTRRDLLPDDMAESLKQLQDRVPPFPSEQARGIIEKSLGAPVSELFA 120
Query: 120 DFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA--WAEP 177
+F P+A+AS+AQVH ATL +G++VVVKV GI+ +I +DL + + W+E
Sbjct: 121 EFSPDPMASASVAQVHAATLPNGQKVVVKVLRPGIEKVIRQDLGLMYLMAGLLEKYWSEG 180
Query: 178 QYDFNP--IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPE 235
+ +P ++ ++ ELD EA N + N E+S + IP
Sbjct: 181 K-RLHPVEVVADYDSTIHDELDLQREAANASQLRRNF------ENSPL-------IYIPF 226
Query: 236 V--IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 293
+ + ++VL++E + GI + D +LE GVN + + E+ + Q++ D FF+ D H
Sbjct: 227 IDWDYTRKSVLVMERIHGIPIADVPALEKAGVNMRVLAEKGVEIFFTQVFRDSFFHADMH 286
Query: 294 PGNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFAAAEGDH 338
PGN V P P I +DFG+ L+ + LA+ A D+
Sbjct: 287 PGNIFVDVSNPADPKYIAIDFGIVGTLAPDDQSYLARNLLAFFRRDY 333
>sp|C4L962|UBIB_TOLAT Probable ubiquinone biosynthesis protein UbiB OS=Tolumonas auensis
(strain DSM 9187 / TA4) GN=ubiB PE=3 SV=1
Length = 543
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 170/343 (49%), Gaps = 24/343 (6%)
Query: 7 YRRRMSVFSMAILIYLDYKAVQQREKW-IKKSKISALWQRAHERNAKRVLNLIIKLEGL- 64
+RR ++ S+ + LD + + W ++ + S W R R L EGL
Sbjct: 6 WRRFYTIGSVLLRHGLDELIPRHWQPWPVRLFRRSLFWLRNRYPEQSRGARLRHAFEGLG 65
Query: 65 --WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFV 122
++K GQ LSTR D+LP L LQD +P Q + IE+ G+ + +F DF
Sbjct: 66 PVFIKFGQMLSTRRDLLPPDLAEELAMLQDRVPSFDGQLAREQIEQALGQPIEALFADFD 125
Query: 123 ETPLATASIAQVHRATLVDGR-QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDF 181
+ PLA+AS+AQVH A L + ++V+KV IK +I +D++ + +A+ P
Sbjct: 126 QQPLASASVAQVHTARLKENNAEIVIKVIRPDIKPVINDDIRLMRLCAKIVAFLIPNNRL 185
Query: 182 NP--IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ- 238
P +I+E+ + EL+ SEA N + + E+S+ + +P V
Sbjct: 186 RPVEVIEEYRRTLLDELNLMSEAANA------IQLRRNFENSSH-------LYVPLVYSD 232
Query: 239 -SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNF 297
E+VL++E + GI ++D +LEA G + + + E + Q++ D FF+ D HPGN
Sbjct: 233 YCRESVLVMERIYGIPVSDRAALEANGTDLKLLAERGVEVFFTQVFRDSFFHADMHPGNV 292
Query: 298 LVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFAAAEGDH 338
VS + PH P I +D G+ L+ K+ LA+ F A D+
Sbjct: 293 FVSYEHPHDPQWIGIDCGIVGTLNRQDKRYLAENFLAFFNRDY 335
>sp|B7VHC3|UBIB_VIBSL Probable ubiquinone biosynthesis protein UbiB OS=Vibrio splendidus
(strain LGP32) GN=ubiB PE=3 SV=1
Length = 544
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 148/287 (51%), Gaps = 21/287 (7%)
Query: 60 KLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFM 119
+L +W+K GQ +STR D+ P L LQD + P Q + +E+ G + F
Sbjct: 63 ELGPVWIKFGQMMSTRRDLFPPHIADQLALLQDQVAPFDGQLAKRDMEKALGGRLDNWFT 122
Query: 120 DFVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ 178
DF PLA+ASIAQVH A L + GR++V+KV I+ +I DLK + +A + P+
Sbjct: 123 DFDIEPLASASIAQVHTAKLKESGREIVLKVIRPDIRPVIDADLKLMHRMARIVAKSLPE 182
Query: 179 -YDFNP--IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPE 235
P ++ E+ K ELD EA N + + E S ++ +PE
Sbjct: 183 ARRLKPVEVVHEYEKTLLDELDLRREAANA------IQLRRNFEGSE-------ELYVPE 229
Query: 236 VIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 293
VI SSET+++ E + GI+++D E+LEA G N + + E + Q++ D FF+ D H
Sbjct: 230 VIPDLSSETLMVSERIYGIQVSDIETLEANGTNMKLLAERGVTVFFTQVFRDSFFHADMH 289
Query: 294 PGNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFAAAEGDH 338
PGN V+ + P P I LD G+ L+S K+ LA+ A D+
Sbjct: 290 PGNVFVNPENPDNPQWIGLDCGIVGTLNSEDKRYLAENLLAFFNRDY 336
>sp|Q145N7|UBIB_BURXL Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
xenovorans (strain LB400) GN=ubiB PE=3 SV=1
Length = 525
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 148/298 (49%), Gaps = 26/298 (8%)
Query: 64 LWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVE 123
++VK GQ LSTR D+LP + L +LQD +PP +E+ G + +F DF
Sbjct: 62 IFVKFGQVLSTRRDLLPVDIANELAKLQDQVPPFDSAVAIGLVEKSLGAPVDVLFDDFER 121
Query: 124 TPLATASIAQVHRATLVDGRQ----VVVKVQHQGIKTIILEDLKNAKSIVDWIA--WAEP 177
P+A+ASIAQVH AT+ G+ V VKV + +I DL + I W WA+
Sbjct: 122 VPVASASIAQVHFATVKAGQHAGKAVAVKVLRPNMLPVIDSDLALLRDIAVWAERLWADG 181
Query: 178 QYDFNP--IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPE 235
+ P ++ E+ K ELD EA N + N + +L+PE
Sbjct: 182 KR-LKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDL-------------LLVPE 227
Query: 236 VIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 293
+ + TVL++E M G+ ++ E+L A GV+ K+ E + Q++ DGFF+ D H
Sbjct: 228 MYWEFCTPTVLVMERMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMH 287
Query: 294 PGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
PGN VS DP H R I LDFG+ LS K LA+ F A + D+ + + E G
Sbjct: 288 PGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESG 345
>sp|A9KYL6|UBIB_SHEB9 Probable ubiquinone biosynthesis protein UbiB OS=Shewanella baltica
(strain OS195) GN=ubiB PE=3 SV=1
Length = 549
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 27/345 (7%)
Query: 33 WIKKSKISALWQRAHERN---AKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQ 89
+ K ++ S W R +N +R+ + +L +++KLGQ LSTR D+L + + S L
Sbjct: 33 YFKLARNSLFWIRNKHKNKPGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAM 92
Query: 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVK 148
LQD +PP Q IE E + +F DF ETPLA+ASI+QVH ATL +G+ VV+K
Sbjct: 93 LQDKVPPFDGALARQAIEAELKAPIESLFDDFNETPLASASISQVHTATLKSNGKDVVLK 152
Query: 149 VQHQGIKTIILEDLK---NAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 205
V ++T I DL+ +++++ + +I+++ EL+ EA N
Sbjct: 153 VLRPNVETKIQADLQLMSQTAKLIEYLLGEGNRLRPAEVIEDYRVTILGELNLKLEALNA 212
Query: 206 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF 263
+ +N DS+ + +P V + ++++E + GI ++D +L+A
Sbjct: 213 ------VKLRNNFLDSDA-------LYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQ 259
Query: 264 GVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSS 321
G N + + E + Q++ D FF+ D HPGN +S+D P P I LD G+ LS
Sbjct: 260 GTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEV 319
Query: 322 MKQALAKMFFAAAEGDHVALLSAFAEMGL---RLRLDVPEQAMEV 363
K+ LA+ F A D+ + + E G + L EQA++V
Sbjct: 320 DKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKV 364
>sp|A6WIE7|UBIB_SHEB8 Probable ubiquinone biosynthesis protein UbiB OS=Shewanella baltica
(strain OS185) GN=ubiB PE=3 SV=1
Length = 549
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 27/345 (7%)
Query: 33 WIKKSKISALWQRAHERN---AKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQ 89
+ K ++ S W R +N +R+ + +L +++KLGQ LSTR D+L + + S L
Sbjct: 33 YFKLARNSLFWIRNKHKNKPGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAM 92
Query: 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVK 148
LQD +PP Q IE E + +F DF ETPLA+ASI+QVH ATL +G+ VV+K
Sbjct: 93 LQDKVPPFDGALARQAIEAELKAPIESLFDDFNETPLASASISQVHTATLKSNGKDVVLK 152
Query: 149 VQHQGIKTIILEDLK---NAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 205
V ++T I DL+ +++++ + +I+++ EL+ EA N
Sbjct: 153 VLRPNVETKIQADLQLMSQTAKLIEYLLGEGNRLRPAEVIEDYRVTILGELNLKLEALNA 212
Query: 206 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF 263
+ +N DS+ + +P V + ++++E + GI ++D +L+A
Sbjct: 213 ------VKLRNNFLDSDA-------LYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQ 259
Query: 264 GVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSS 321
G N + + E + Q++ D FF+ D HPGN +S+D P P I LD G+ LS
Sbjct: 260 GTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEV 319
Query: 322 MKQALAKMFFAAAEGDHVALLSAFAEMGL---RLRLDVPEQAMEV 363
K+ LA+ F A D+ + + E G + L EQA++V
Sbjct: 320 DKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKV 364
>sp|B2SX38|UBIB_BURPP Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
phytofirmans (strain DSM 17436 / PsJN) GN=ubiB PE=3 SV=1
Length = 525
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 147/298 (49%), Gaps = 26/298 (8%)
Query: 64 LWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVE 123
++VK GQ LSTR D+LP L +LQD +PP + +E G + +F DF
Sbjct: 62 IFVKFGQVLSTRRDLLPVDIADELAKLQDQVPPFESAVAIRLVENALGAPVDVLFDDFER 121
Query: 124 TPLATASIAQVHRATLVDGRQ----VVVKVQHQGIKTIILEDLKNAKSIVDWIA--WAEP 177
P+A+ASIAQVH AT+ G+ V VKV + +I DL + I W WA+
Sbjct: 122 VPVASASIAQVHFATVKAGQHAGKAVAVKVLRPNMLPVIDSDLALLRDIAVWAERLWADG 181
Query: 178 QYDFNP--IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPE 235
+ P ++ E+ K ELD EA N + N + +L+PE
Sbjct: 182 KR-LKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDL-------------LLVPE 227
Query: 236 VIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 293
+ + TVL++E M G+ ++ E+L A GV+ K+ E + Q++ DGFF+ D H
Sbjct: 228 MYWEFCTPTVLVMERMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMH 287
Query: 294 PGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
PGN VS DP H R I LDFG+ LS K LA+ F A + D+ + + E G
Sbjct: 288 PGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESG 345
>sp|A5F4G3|UBIB_VIBC3 Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=ubiB PE=3 SV=1
Length = 544
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 158/314 (50%), Gaps = 26/314 (8%)
Query: 37 SKISALW---QRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYIS-LLKQLQD 92
++ S W Q A + R+ + +L +W+K GQ +STR D+ P PYI+ L LQD
Sbjct: 37 ARKSLFWLRNQHADKALGDRLRLALQELGPVWIKFGQMMSTRRDLFP-PYIADPLAMLQD 95
Query: 93 SLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQH 151
+ P + Q IE E G + F DF PLA+ASIAQVH A L +GR VV+KV
Sbjct: 96 KVAPFDGLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIR 155
Query: 152 QGIKTIILEDLKNAKSIVDWIAWAEPQ-YDFNP--IIDEWCKEAPKELDFNSEAENTRIV 208
I+ I D+K + +A A P+ P ++ E+ K ELD EA N
Sbjct: 156 PDIRPQIDADIKLMYRVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANA--- 212
Query: 209 SANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVN 266
+ + E+S ++ +PEV+ +ETV++ E + GI+++D L A G N
Sbjct: 213 ---IQLRRNFENSE-------ELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTN 262
Query: 267 KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQ 324
+ + E + Q++ D FF+ D HPGN V+ + P P I LD G+ L+S K+
Sbjct: 263 MKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKR 322
Query: 325 ALAKMFFAAAEGDH 338
LA+ F A D+
Sbjct: 323 YLAENFLAFFNRDY 336
>sp|Q87TH2|UBIB_VIBPA Probable ubiquinone biosynthesis protein UbiB OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=ubiB PE=3 SV=1
Length = 544
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 144/287 (50%), Gaps = 21/287 (7%)
Query: 60 KLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFM 119
+L +W+K GQ +STR D+ P L LQD + P + Q +E+ G + F
Sbjct: 63 ELGPVWIKFGQMMSTRRDLFPPHIADPLALLQDQVAPFDGELAKQQMEKALGGPLENWFT 122
Query: 120 DFVETPLATASIAQVHRATLVDGRQ-VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ 178
+F PLA+ASIAQVH A L D Q VV+KV I+ +I DLK + +A A P+
Sbjct: 123 EFDIKPLASASIAQVHTARLKDTNQEVVLKVIRPDIRPVIDSDLKLMHRMARIVAGAMPE 182
Query: 179 -YDFNP--IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPE 235
P ++ E+ K ELD EA N + + E S ++ +PE
Sbjct: 183 ARRLKPVEVVREYEKTLLDELDLRREAANA------IQLRRNFEGSE-------ELYVPE 229
Query: 236 VIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 293
V S+ETV++ E + GI+++D E LEA G N + + E + Q++ D FF+ D H
Sbjct: 230 VFPDFSNETVMVSERIYGIQVSDIEGLEANGTNMKLLAERGVSVFFTQVFRDSFFHADMH 289
Query: 294 PGNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFAAAEGDH 338
PGN V + P P I LD G+ L+S K+ LA+ F A D+
Sbjct: 290 PGNVFVKPEHPENPMWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDY 336
>sp|B2JCV1|UBIB_BURP8 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
phymatum (strain DSM 17167 / STM815) GN=ubiB PE=3 SV=1
Length = 527
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 146/298 (48%), Gaps = 26/298 (8%)
Query: 64 LWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVE 123
++VK GQ LSTR D+L + L +LQD +PP IE+ G + +F DF
Sbjct: 62 IFVKFGQVLSTRRDLLRPDIATELAKLQDQVPPFDSAVAIAIIEKSLGAPVDTIFDDFER 121
Query: 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA--WAEP 177
P+A+ASIAQVH ATL G+QV VKV + +I DL + I W WA+
Sbjct: 122 VPVASASIAQVHFATLKIGQHAGKQVAVKVLRPNMLPVIDSDLALLRDIAVWAERLWADG 181
Query: 178 QYDFNP--IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPE 235
+ P ++ E+ K ELD EA N + N + +L+PE
Sbjct: 182 KR-LKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDL-------------LLVPE 227
Query: 236 VI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 293
+ + VL++E M G+ ++ ++L GV+ K+ E + Q++ DGFF+ D H
Sbjct: 228 MYWEYCTANVLVMERMVGVPISQVDTLRVAGVDIPKLAREGVEIFFTQVFRDGFFHADMH 287
Query: 294 PGNFLVSKDPPH--RPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
PGN VS DP H R I LDFG+ LS K LA+ F A + D+ + + E G
Sbjct: 288 PGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESG 345
>sp|Q2NWT9|UBIB_SODGM Probable ubiquinone biosynthesis protein UbiB OS=Sodalis
glossinidius (strain morsitans) GN=ubiB PE=3 SV=1
Length = 544
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 141/284 (49%), Gaps = 16/284 (5%)
Query: 60 KLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFM 119
+L +W+K GQ LSTR D+ P L LQD + P IER G+ + F
Sbjct: 63 ELGPVWIKFGQMLSTRRDLFPPAIADQLAMLQDRVQPFDGALARAHIERSMGQPLETWFD 122
Query: 120 DFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ- 178
DF + PLA+ASIAQVH A L +G++VV+KV I +I D++ + W+ P
Sbjct: 123 DFQQEPLASASIAQVHTARLKNGQEVVIKVIRPDILPMIKADMRLMYRLASWVPHLLPDG 182
Query: 179 YDFNP--IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 236
P ++ E+ K EL+ EA N + N + P + + P+
Sbjct: 183 RRLRPVEVVLEYEKTLLDELNLLREAANAIQLRRNF---------DGSPMLYIPEVYPDY 233
Query: 237 IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 296
SET++++E + G+ +ND +LE G N + + E + + Q++ D FF+GD HPGN
Sbjct: 234 --CSETMMVMERIYGVPVNDVAALEKQGTNMKLLAERGVQVFFTQVFRDSFFHGDMHPGN 291
Query: 297 FLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFAAAEGDH 338
VS + P P I +D G+ L+ K+ LA+ F A D+
Sbjct: 292 IFVSFEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDY 335
>sp|B9ME24|UBIB_ACIET Probable ubiquinone biosynthesis protein UbiB OS=Acidovorax ebreus
(strain TPSY) GN=ubiB PE=3 SV=1
Length = 521
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 158/332 (47%), Gaps = 25/332 (7%)
Query: 30 REKWIKK-SKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLK 88
R+ W++ +++ ++ +R+ + L ++VK GQ LSTR D++P L
Sbjct: 28 RQPWLRAVTRVITFGRKLDAPRGQRLREALESLGPIFVKFGQVLSTRRDLMPPDIADELA 87
Query: 89 QLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD----GRQ 144
LQD +PP TIER F +G +F+ F P+A+ASIAQVH A + D R+
Sbjct: 88 LLQDRVPPFDPDVAIATIERAFRRPIGEVFVSFDRQPVASASIAQVHFAVIRDRQGHARE 147
Query: 145 VVVKVQHQGIKTIILEDLKNAKSIVDWI-AWAEPQYDFNP--IIDEWCKEAPKELDFNSE 201
V VKV G+ +I +DL + + W+ + + P ++ E+ ELD E
Sbjct: 148 VAVKVLRPGMLPVIDKDLALMRMMAGWVESLSADGKRLKPREVVAEFDNYLHDELDLVRE 207
Query: 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS--SETVLILEFMDGIRLNDCES 259
A N + N+ + VLIPEV VL++E M G+ +N E
Sbjct: 208 AANAAQLRRNMQGLDL-------------VLIPEVFWDFCHAEVLVMERMKGVPINQVER 254
Query: 260 LEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKK 317
L + GV+ K+ + + Q++ DGFF+ D HPGN VS P R I LDFG+
Sbjct: 255 LRSAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGRYISLDFGIVGT 314
Query: 318 LSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
L+ K+ LA+ F A D+ + E G
Sbjct: 315 LTEFDKEYLAQNFTAFFRRDYKRVAELHIESG 346
>sp|A3D9F4|UBIB_SHEB5 Probable ubiquinone biosynthesis protein UbiB OS=Shewanella baltica
(strain OS155 / ATCC BAA-1091) GN=ubiB PE=3 SV=1
Length = 549
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 173/345 (50%), Gaps = 27/345 (7%)
Query: 33 WIKKSKISALWQRAHERN---AKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQ 89
+ K ++ S W R +N +R+ + +L +++KLGQ LSTR D+L + + S L
Sbjct: 33 YFKLARNSLFWIRNKHKNKPGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAM 92
Query: 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVK 148
LQD +PP Q IE E + +F DF E PLA+ASI+QVH ATL +G+ VV+K
Sbjct: 93 LQDKVPPFDGALARQAIEAELKAPIESLFDDFNEIPLASASISQVHTATLKSNGKDVVLK 152
Query: 149 VQHQGIKTIILEDLK---NAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 205
V ++T I DL+ +++++ + +I+++ EL+ EA N
Sbjct: 153 VLRPNVETKIQADLQLMSQTAKLIEYLLGEGNRLRPAEVIEDYRVTILGELNLKLEALNA 212
Query: 206 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF 263
+ +N DS+ + +P V + ++++E + GI ++D +L+A
Sbjct: 213 ------VKLRNNFLDSDA-------LYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQ 259
Query: 264 GVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSS 321
G N + + E + Q++ D FF+ D HPGN +S+D P P I LD G+ LS
Sbjct: 260 GTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEV 319
Query: 322 MKQALAKMFFAAAEGDHVALLSAFAEMGL---RLRLDVPEQAMEV 363
K+ LA+ F A D+ + + E G + L EQA++V
Sbjct: 320 DKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKV 364
>sp|B8E6B4|UBIB_SHEB2 Probable ubiquinone biosynthesis protein UbiB OS=Shewanella baltica
(strain OS223) GN=ubiB PE=3 SV=1
Length = 549
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 173/345 (50%), Gaps = 27/345 (7%)
Query: 33 WIKKSKISALWQRAHERN---AKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQ 89
+ K ++ S W R +N +R+ + +L +++KLGQ LSTR D+L + + S L
Sbjct: 33 YFKLARNSLFWIRNKHKNKPGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAM 92
Query: 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVK 148
LQD +PP Q IE E + +F DF E PLA+ASI+QVH ATL +G+ VV+K
Sbjct: 93 LQDKVPPFDGALARQAIEAELKAPIESLFDDFNEIPLASASISQVHTATLKSNGKDVVLK 152
Query: 149 VQHQGIKTIILEDLK---NAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 205
V ++T I DL+ +++++ + +I+++ EL+ EA N
Sbjct: 153 VLRPNVETKIQADLQLMSQTAKLIEYLLGEGNRLRPAEVIEDYRVTILGELNLKLEALNA 212
Query: 206 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF 263
+ +N DS+ + +P V + ++++E + GI ++D +L+A
Sbjct: 213 ------VKLRNNFLDSDA-------LYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQ 259
Query: 264 GVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSS 321
G N + + E + Q++ D FF+ D HPGN +S+D P P I LD G+ LS
Sbjct: 260 GTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEV 319
Query: 322 MKQALAKMFFAAAEGDHVALLSAFAEMGL---RLRLDVPEQAMEV 363
K+ LA+ F A D+ + + E G + L EQA++V
Sbjct: 320 DKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKV 364
>sp|C3LPS7|UBIB_VIBCM Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain M66-2) GN=ubiB PE=3 SV=1
Length = 544
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 154/313 (49%), Gaps = 24/313 (7%)
Query: 37 SKISALW---QRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDS 93
++ S W Q A + R+ + +L +W+K GQ +STR D+ P L LQD
Sbjct: 37 ARKSLFWLRNQHADKALGDRLRLALQELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDK 96
Query: 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQ 152
+ P + Q IE E G + F DF PLA+ASIAQVH A L +GR VV+KV
Sbjct: 97 VAPFDGLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRP 156
Query: 153 GIKTIILEDLKNAKSIVDWIAWAEPQ-YDFNP--IIDEWCKEAPKELDFNSEAENTRIVS 209
I+ I D+K + +A A P+ P ++ E+ K ELD EA N
Sbjct: 157 DIRPQIDADIKLMYRVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANA---- 212
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNK 267
+ + E+S ++ +PEV+ +ETV++ E + GI+++D L A G N
Sbjct: 213 --IQLRRNFENSE-------ELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNM 263
Query: 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQA 325
+ + E + Q++ D FF+ D HPGN V+ + P P I LD G+ L+S K+
Sbjct: 264 KLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRY 323
Query: 326 LAKMFFAAAEGDH 338
LA+ F A D+
Sbjct: 324 LAENFLAFFNRDY 336
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,083,290
Number of Sequences: 539616
Number of extensions: 10278599
Number of successful extensions: 27470
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 26849
Number of HSP's gapped (non-prelim): 302
length of query: 645
length of database: 191,569,459
effective HSP length: 124
effective length of query: 521
effective length of database: 124,657,075
effective search space: 64946336075
effective search space used: 64946336075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)