Query 006430
Match_columns 645
No_of_seqs 343 out of 2894
Neff 7.1
Searched_HMMs 29240
Date Tue Mar 26 00:48:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006430.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006430hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v0w_A Phospholipase D; hydrol 100.0 3.4E-29 1.2E-33 280.5 19.8 297 241-635 65-377 (506)
2 3hsi_A Phosphatidylserine synt 99.9 4.2E-26 1.4E-30 251.4 16.2 268 209-631 24-309 (458)
3 1xdp_A Polyphosphate kinase; P 99.8 3.8E-19 1.3E-23 203.4 18.0 139 242-459 347-494 (687)
4 2o8r_A Polyphosphate kinase; s 99.8 1.2E-19 4.2E-24 206.0 11.9 207 241-627 351-569 (705)
5 2fk9_A Protein kinase C, ETA t 99.8 3.6E-19 1.2E-23 168.5 12.9 130 10-180 22-156 (157)
6 2dmh_A Myoferlin; beta-sandwic 99.8 1.7E-18 5.7E-23 160.0 15.9 124 15-184 5-136 (140)
7 3b7y_A E3 ubiquitin-protein li 99.8 1.9E-18 6.5E-23 162.2 15.5 124 15-181 18-153 (153)
8 2ep6_A MCTP2 protein; beta san 99.8 2.8E-18 9.5E-23 157.4 15.0 129 7-181 3-132 (133)
9 1wfj_A Putative elicitor-respo 99.8 1.2E-18 4.1E-23 160.2 12.4 125 14-185 7-134 (136)
10 3kwu_A MUNC13-1; calcium bindi 99.8 1.1E-17 3.7E-22 156.2 18.9 123 13-181 13-147 (148)
11 1gmi_A Protein kinase C, epsil 99.8 3E-18 1E-22 157.9 14.2 129 14-182 3-134 (136)
12 3m7f_B E3 ubiquitin-protein li 99.8 1.1E-17 3.8E-22 161.1 16.0 124 16-182 7-142 (176)
13 4ggj_A Mitochondrial cardiolip 99.7 2E-18 6.9E-23 169.5 9.6 134 241-461 45-179 (196)
14 1rlw_A Phospholipase A2, CALB 99.7 1.3E-17 4.5E-22 151.0 13.1 118 16-181 2-125 (126)
15 3pyc_A E3 ubiquitin-protein li 99.7 1.4E-16 4.8E-21 145.8 15.5 120 17-179 5-131 (132)
16 2nq3_A Itchy homolog E3 ubiqui 99.7 7.6E-17 2.6E-21 155.1 13.4 131 12-187 31-167 (173)
17 2b3r_A Phosphatidylinositol-4- 99.7 4.9E-16 1.7E-20 142.9 14.6 109 9-160 12-129 (134)
18 1rsy_A Synaptotagmin I; calciu 99.6 7.3E-16 2.5E-20 144.6 13.0 105 15-161 40-150 (152)
19 2r83_A Synaptotagmin-1; C2A-C2 99.6 1.8E-15 6.3E-20 156.1 17.1 126 15-182 17-148 (284)
20 1a25_A CALB, protein kinase C 99.6 8.7E-16 3E-20 143.5 13.3 107 12-161 26-139 (149)
21 2q3x_A Regulating synaptic mem 99.6 8.1E-16 2.8E-20 147.5 13.1 109 12-162 25-140 (171)
22 1rh8_A Piccolo protein; beta-s 99.6 3.3E-16 1.1E-20 144.9 9.8 108 12-161 13-138 (142)
23 3rdl_A Protein kinase C alpha 99.6 1E-15 3.5E-20 140.5 13.0 108 12-162 11-125 (137)
24 3f04_A Synaptotagmin-1; C2A, c 99.6 8E-16 2.7E-20 142.6 12.0 104 15-160 32-141 (143)
25 1byr_A Protein (endonuclease); 99.6 8E-16 2.7E-20 144.3 12.1 135 241-460 13-149 (155)
26 3fdw_A Synaptotagmin-like prot 99.6 7.8E-16 2.7E-20 143.7 11.8 105 16-162 22-135 (148)
27 2d8k_A Synaptotagmin VII; exoc 99.6 2.1E-15 7.3E-20 139.5 13.4 104 15-160 24-134 (141)
28 2z0u_A WW domain-containing pr 99.6 4.6E-16 1.6E-20 147.0 8.8 104 15-160 41-154 (155)
29 4gel_A Mitochondrial cardiolip 99.6 2.5E-16 8.5E-21 156.9 7.2 152 241-462 57-212 (220)
30 2bwq_A Regulating synaptic mem 99.6 2.9E-15 1E-19 136.1 12.4 101 16-159 17-128 (129)
31 1v27_A Regulating synaptic mem 99.6 4E-15 1.4E-19 137.1 12.7 105 16-163 20-135 (141)
32 3fbk_A RGS3, RGP3, regulator o 99.6 5.3E-15 1.8E-19 139.0 13.3 107 13-162 23-138 (153)
33 1wfm_A Synaptotagmin XIII; C2 99.6 4.5E-15 1.5E-19 137.1 12.1 82 80-161 44-132 (138)
34 2chd_A Rabphilin-3A, exophilin 99.6 6.8E-15 2.3E-19 136.1 12.4 103 15-159 27-138 (142)
35 2dmg_A KIAA1228 protein; beta- 99.6 7.1E-15 2.4E-19 136.0 11.3 104 16-162 23-136 (142)
36 1ugk_A Synaptotagmin IV, KIAA1 99.6 1.4E-14 4.8E-19 133.4 13.1 105 15-161 20-133 (138)
37 3n5a_A Synaptotagmin-7; calciu 99.6 1.3E-14 4.3E-19 133.2 12.2 105 15-163 14-126 (138)
38 1tjx_A Similar to synaptotagmi 99.6 1.7E-14 5.9E-19 136.2 13.0 104 15-160 23-146 (159)
39 2cm5_A Rabphilin-3A; protein t 99.6 2.3E-14 8E-19 136.3 13.6 91 15-147 35-133 (166)
40 1w15_A Synaptotagmin IV; metal 99.6 3.6E-15 1.2E-19 139.9 7.8 103 15-161 28-138 (153)
41 2enp_A B/K protein; C2 type 1, 99.6 5.9E-15 2E-19 137.5 8.9 112 16-164 25-143 (147)
42 1dqv_A Synaptotagmin III; beta 99.5 4.9E-14 1.7E-18 146.7 14.5 125 15-182 18-150 (296)
43 3l9b_A Otoferlin; C2-domain, b 99.5 1.4E-13 4.7E-18 126.3 12.6 102 80-184 37-143 (144)
44 2cjt_A UNC-13 homolog A, MUNC1 99.5 2.7E-13 9.1E-18 124.3 13.5 96 80-179 23-130 (131)
45 3jzy_A Intersectin 2; C2 domai 99.4 5.4E-13 1.8E-17 148.9 14.8 117 15-180 385-507 (510)
46 2cjs_A UNC-13 homolog A, MUNC1 99.4 1.1E-12 3.6E-17 125.4 12.8 98 80-181 32-141 (167)
47 3nsj_A Perforin-1; pore formin 99.4 1.5E-12 5.1E-17 145.7 15.4 107 16-179 393-502 (540)
48 3bxj_A RAS GTPase-activating p 99.4 4E-14 1.4E-18 157.3 1.3 128 12-186 6-162 (483)
49 1djx_A PLC-D1, phosphoinositid 99.4 1.7E-12 5.6E-17 148.3 14.6 122 15-180 495-623 (624)
50 2r83_A Synaptotagmin-1; C2A-C2 99.3 4.1E-12 1.4E-16 130.9 13.0 103 16-160 149-271 (284)
51 1cjy_A CPLA2, protein (cytosol 99.3 3.1E-12 1.1E-16 147.5 11.8 103 15-159 16-124 (749)
52 1dqv_A Synaptotagmin III; beta 99.3 2E-12 6.9E-17 134.5 4.9 106 16-164 151-264 (296)
53 3pfq_A PKC-B, PKC-beta, protei 99.1 3.7E-10 1.3E-14 130.5 13.3 108 12-162 167-281 (674)
54 3ohm_B 1-phosphatidylinositol- 98.9 1.8E-09 6.1E-14 126.5 11.4 95 80-181 742-845 (885)
55 3qr0_A Phospholipase C-beta (P 98.9 2.6E-09 9E-14 124.4 12.5 113 16-181 649-771 (816)
56 2zkm_X 1-phosphatidylinositol- 98.9 2.9E-09 9.9E-14 124.5 12.4 113 15-180 676-798 (799)
57 1yrk_A NPKC-delta, protein kin 98.9 1.6E-08 5.4E-13 90.2 14.1 89 80-180 27-124 (126)
58 2enj_A NPKC-theta, protein kin 98.9 1.4E-08 4.8E-13 91.7 11.3 90 80-181 32-130 (138)
59 3hsi_A Phosphatidylserine synt 98.8 1.2E-08 4E-13 112.4 10.5 149 241-461 257-421 (458)
60 1v0w_A Phospholipase D; hydrol 98.7 2.3E-07 7.8E-12 103.6 15.5 159 242-461 314-493 (506)
61 1byr_A Protein (endonuclease); 97.7 6.1E-05 2.1E-09 69.7 7.0 53 560-632 13-65 (155)
62 4ggj_A Mitochondrial cardiolip 97.4 0.00018 6.2E-09 69.9 5.8 49 560-628 45-93 (196)
63 4gel_A Mitochondrial cardiolip 97.3 0.00034 1.2E-08 68.7 6.5 50 560-629 57-106 (220)
64 2o8r_A Polyphosphate kinase; s 97.2 0.00068 2.3E-08 77.4 8.9 136 235-461 512-655 (705)
65 1xdp_A Polyphosphate kinase; P 96.0 0.0055 1.9E-07 70.2 5.6 48 564-631 350-403 (687)
66 3qph_A TRMB, A global transcri 94.9 0.018 6.2E-07 60.6 4.7 48 241-305 118-165 (342)
67 2f5t_X Archaeal transcriptiona 93.7 0.059 2E-06 53.5 5.2 51 241-308 9-59 (233)
68 3qph_A TRMB, A global transcri 89.9 0.38 1.3E-05 50.5 6.2 54 559-632 117-170 (342)
69 3l4c_A Dedicator of cytokinesi 83.9 9.5 0.00032 37.1 11.7 41 91-131 76-119 (220)
70 2f5t_X Archaeal transcriptiona 82.8 2.1 7.3E-05 42.2 6.8 53 559-631 8-60 (233)
71 2yrb_A Protein fantom; beta sa 79.8 10 0.00036 34.8 9.8 98 82-181 44-150 (156)
72 2wxf_A Phosphatidylinositol-4, 72.0 22 0.00074 42.1 12.2 69 80-148 235-325 (940)
73 3hhm_A Phosphatidylinositol-4, 65.6 31 0.0011 41.3 11.7 68 80-148 375-456 (1091)
74 1e7u_A Phosphatidylinositol 3- 45.0 1.1E+02 0.0037 36.3 11.6 69 80-148 238-331 (961)
75 2y3a_A Phosphatidylinositol-4, 30.5 78 0.0027 38.0 7.4 69 80-148 371-471 (1092)
76 2d1p_A TUSD, hypothetical UPF0 28.7 1.2E+02 0.0042 26.9 6.8 77 225-304 11-90 (140)
77 2c1l_A Restriction endonucleas 26.5 1.9E+02 0.0064 28.7 8.0 80 284-396 50-129 (358)
78 2l82_A Designed protein OR32; 26.1 76 0.0026 27.1 4.5 44 285-342 90-133 (162)
79 1jx7_A Hypothetical protein YC 24.7 1.3E+02 0.0046 24.8 6.1 63 238-305 13-79 (117)
80 1t3g_A X-linked interleukin-1 21.0 1.2E+02 0.004 27.5 5.2 55 560-628 55-110 (159)
No 1
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=99.96 E-value=3.4e-29 Score=280.55 Aligned_cols=297 Identities=17% Similarity=0.143 Sum_probs=170.1
Q ss_pred cchHHHHHHHHHhccceEEEEEEEe-ecCcceeecCCCCCCCCCCCcHHHHHHHHhhcC--CEEEEEEecCCCccCccCc
Q 006430 241 GTCWEDICHAISEAHHLIYIVGWSV-FHKIKLIREQTRPLPRGGDLTLGELLKYKSEEG--VRVLLLVWDDKTSHDKLGV 317 (645)
Q Consensus 241 ~~~f~~l~~aI~~Ak~~I~i~~w~~-~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rG--V~VriL~~D~~gs~~~~~~ 317 (645)
+++|++|+++|++||++|+|++|++ .++ . .| .+|.++|++||+|| |+||||+ |.+|+....
T Consensus 65 ~~~~~~l~~~I~~Ak~~I~i~~y~~~~~d-------~----~g--~~i~~aL~~aa~rGp~V~Vril~-D~~g~~~~~-- 128 (506)
T 1v0w_A 65 KRLLAKMTENIGNATRTVDISTLAPFPNG-------A----FQ--DAIVAGLKESAAKGNKLKVRILV-GAAPVYHMN-- 128 (506)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEEESSCCCH-------H----HH--HHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCC--
T ss_pred HHHHHHHHHHHHHhccEEEEEEeeccCCC-------h----HH--HHHHHHHHHHHhCCCCcEEEEEE-eCccccccc--
Confidence 5789999999999999999999984 542 1 22 79999999999999 9999995 886654311
Q ss_pred cCCCccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecceeeccceEEEeccCCCCCCcceEEEEccccCCCCC
Q 006430 318 KTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGR 397 (645)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~~~vafvGG~ni~~~r 397 (645)
..+..+.+.|+.+|+++.. ..+.....+ .. ....+.|||||++|||++ +||+||+|+++++
T Consensus 129 -------~~~~~~~~~L~~~g~~~~~--~~~~~~~~~-~~-~~~~~~r~H~K~~ViD~~--------~a~~Gg~Nl~~d~ 189 (506)
T 1v0w_A 129 -------VIPSKYRDELTAKLGKAAE--NITLNVASM-TT-SKTAFSWNHSKILVVDGQ--------SALTGGINSWKDD 189 (506)
T ss_dssp -------CHHHHHHHHHHHHHGGGGG--GEEEEEEEE-CS-BTTTTBCBCCCEEEETTT--------EEEEESCCCCHHH
T ss_pred -------cCCHHHHHHHHhcccceee--cCccccccc-cc-cCCccccceeeEEEECCc--------EEEeeccccCccc
Confidence 0134566667766654310 000000000 00 001124999999999998 9999999997656
Q ss_pred CCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeChHHHHHHHHHHHHHhhhcccchhhhhhcccccccc
Q 006430 398 YDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRD 477 (645)
Q Consensus 398 ~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gpav~dl~~~F~~rWn~~~~~~~~~~~~~~~~~~~~ 477 (645)
|.+. .++|||++++++||+|.+++..|.++|+....... .+.. .|..
T Consensus 190 y~~~----------------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~~~~~---~~~~--~~~~ 236 (506)
T 1v0w_A 190 YLDT----------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKS---NIAS--VWFA 236 (506)
T ss_dssp HTSS----------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHHTTT---STTT--EEEE
T ss_pred cccC----------------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhccccC---Chhh--hccc
Confidence 6541 14899999999999999999999999997653210 0000 0000
Q ss_pred cccccccccccccCccccccCCCccccCCCCcccccccCCCCCceeeEEEeeccCCCCCCCCCCch----h-hhcccccc
Q 006430 478 DYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIE----D-IDDQSLIC 552 (645)
Q Consensus 478 ~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~vQv~rs~~~~~~~~~p~~~~----~-~~~~~~~~ 552 (645)
.. ......+.+. ....|.. ....+...+|+...+...-...-|.... + ....-+..
T Consensus 237 ~~-~~~~~~~~~~----------~~~~p~~--------~~~~~~~~~~~~~~~~~~i~~~~P~~~~~~~~w~~~~~~~~~ 297 (506)
T 1v0w_A 237 AS-GNAGCMPTMH----------KDTNPKA--------SPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVV 297 (506)
T ss_dssp ES-TTCCCCTTHH----------HHHSCSS--------CCCCSSEEEEEEECCCSSSCSCCTTCCCCCCCCCCSSSCSST
T ss_pred cc-cccccCchhc----------cccCccc--------CcccccccceecccccceeecCCccccccccCcccccceeec
Confidence 00 0000000000 0000100 0111333333322110000000011000 0 00000000
Q ss_pred ccC--------ccchhHHHHHHHHHHHhccceEEEeeeeecccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEE
Q 006430 553 AKD--------VVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVY 624 (645)
Q Consensus 553 ~~~--------~~~e~sI~~~yl~aI~~Ak~~IYIenqYFi~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~ 624 (645)
..+ ...+..+.++|+.+|.+||++|||++|||.|-- . |. ......|+++|..|++|||+ |+
T Consensus 298 d~P~~~~~~~~~~~~~~~~~~~~~~I~~A~~~I~I~tq~~~pyf-~-p~-------~~~~~~i~~aL~~Aa~rGV~--Vr 366 (506)
T 1v0w_A 298 GLHDNTNADRDYDTVNPEESALRALVASAKGHIEISQQDLNATC-P-PL-------PRYDIRLYDALAAKMAAGVK--VR 366 (506)
T ss_dssp TCCCTTTSCHHHHHHCHHHHHHHHHHHTCSSEEEEEESCSSCCT-T-TS-------CSCCHHHHHHHHHHHHTTCE--EE
T ss_pred cccccccCcccccccccHHHHHHHHHhCcCcEEEEEeccccccc-c-Cc-------ccchHHHHHHHHHHHhCCCc--EE
Confidence 000 012467999999999999999999995554310 0 00 01225899999999999986 88
Q ss_pred EEecCCCCCCC
Q 006430 625 VIIPMWPEGDP 635 (645)
Q Consensus 625 IvlP~~p~~~~ 635 (645)
||+|..+++..
T Consensus 367 Il~~~~~~~~~ 377 (506)
T 1v0w_A 367 IVVSDPANRGA 377 (506)
T ss_dssp EEECCGGGCC-
T ss_pred EEeCCCCchHH
Confidence 99998875543
No 2
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=99.93 E-value=4.2e-26 Score=251.44 Aligned_cols=268 Identities=12% Similarity=0.046 Sum_probs=170.8
Q ss_pred ccCCeeEEeecccccCCCCCceecCCCCccCCcchHHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHH
Q 006430 209 RKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLG 288 (645)
Q Consensus 209 ~~gn~v~~~~~g~~~~~~~~~~~l~~g~~y~~~~~f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~ 288 (645)
..+|.++++.+| +++|++++++|++|+++|+|++|+|.++ + .| ..|.
T Consensus 24 ~~~n~v~~l~~g--------------------~~~~~~l~~~I~~A~~~I~i~~~~~~~d-------~----~g--~~l~ 70 (458)
T 3hsi_A 24 LQAEQIEFLGSS--------------------AEFKTQIIELIRNAKKRIYVTALYWQKD-------E----AG--QEIL 70 (458)
T ss_dssp CCGGGEEECCCH--------------------HHHHHHHHHHHHTCSSEEEEEESCBCSS-------H----HH--HHHH
T ss_pred ccCCeEEEEeCH--------------------HHHHHHHHHHHHhcCCEEEEEEEEEecC-------c----HH--HHHH
Confidence 458899999998 6899999999999999999999998652 2 33 7999
Q ss_pred HHHHHHhhc--CCEEEEEEecC-------CCccCccCccCCCccccChHHHHhhhcCCC--ceEE--eccCCCCCCccce
Q 006430 289 ELLKYKSEE--GVRVLLLVWDD-------KTSHDKLGVKTPGVMATHDEETKKFFKHSS--VNCV--LAPRYASSKLSYF 355 (645)
Q Consensus 289 ~~L~~~a~r--GV~VriL~~D~-------~gs~~~~~~~~~~~~~~~~~~~~~~l~~~g--v~v~--~~~~~~~~~~~~~ 355 (645)
++|.+||+| ||+||||+ |. +|+.... .+..+.+.|.++| |+|. +.. +|.+
T Consensus 71 ~aL~~aa~r~~GV~Vril~-D~~~~~r~~~g~~~~~----------~~~~~~~~L~~~g~nv~v~~~~f~-~p~~----- 133 (458)
T 3hsi_A 71 DEIYRVKQENPHLDVKVLI-DWHRAQRNLLGAEKSA----------TNADWYCEQRQTYQLPDDPNMFFG-VPIN----- 133 (458)
T ss_dssp HHHHHHHHHSTTCEEEEEE-ETTGGGSCCC-----C----------CHHHHHHHHHHHHTCTTCCCCEEE-ECSS-----
T ss_pred HHHHHHHhcCCCCEEEEEE-ECcccccccccccccc----------ccHHHHHHHHhhCCCceEeeeecC-Cccc-----
Confidence 999999999 99999995 98 3443210 0234555665555 6665 431 2221
Q ss_pred eeeeecceeeccceEEEeccCCCCCCcceEEEEccccCCCCCCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCcee
Q 006430 356 KQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHD 435 (645)
Q Consensus 356 ~~~~~~~~~r~HqK~vVID~~~~~~~~~~vafvGG~ni~~~r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhD 435 (645)
....+.++|+|++||||+ + ++||+||+++++... .....|+|
T Consensus 134 ---~~~~~~r~H~Ki~viD~~--------v-~~~G~Ni~d~y~~~~--------------------------~~~~~drd 175 (458)
T 3hsi_A 134 ---TREVFGVLHVKGFVFDDT--------V-LYSGASINNVYLHQF--------------------------EKYRYDRY 175 (458)
T ss_dssp ---SSGGGCCEECCEEEETTE--------E-EEESCCBSTTTTTCS--------------------------SCCEECCE
T ss_pred ---cccccCcceeeEEEECCC--------E-EEEeeecCHHHhcCC--------------------------cccCcchh
Confidence 113567999999999997 8 556699999554321 12245888
Q ss_pred eeeeEeChHHHHHHHHHHH--HHhhhcccchhhhhhcccccccccc--cc-cccccccccCccccccCCCccccCCCCcc
Q 006430 436 LHCRLDGPAAYDVLINFEQ--RWRKATKLTELTFKFKRVSHWRDDY--LI-KIGRISWILSPELSLKTNGTTIVPRDDNV 510 (645)
Q Consensus 436 v~~~i~Gpav~dl~~~F~~--rWn~~~~~~~~~~~~~~~~~~~~~~--l~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 510 (645)
+. +.||.++|....|++ .|+...-.. +... +..+. +. ....+...+.... .-.+|.
T Consensus 176 ~~--i~g~~~~D~~~~~~~~~~~~g~~v~~-----l~~~--~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~---- 236 (458)
T 3hsi_A 176 QK--ITHAELADSMVNFINDYLLDFSAVYP-----LDVT--NRPRTKEIRGNIRAYRKDLAQNG------EYSLKS---- 236 (458)
T ss_dssp EE--EECHHHHHHHHHHHHHTTCCTTTCEE-----SSSS--CCCCGGGTHHHHHHHHHHHHHHC------CCCCSS----
T ss_pred hh--hcCchHHHHHHHHHHhhhhcCccchh-----hHHH--hcccchhhHHHHHHHHHhhhhcc------cccccc----
Confidence 44 899999999999954 464321110 0000 00000 00 0000000000000 000110
Q ss_pred cccccCCCCCceeeEEEeeccCCCCCCCCCCchhhhccccccccCccchhHHHHHHHHHHHhccceEEEeeeeecccccC
Q 006430 511 VRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYA 590 (645)
Q Consensus 511 ~~~~~~~~~~~~~vQv~rs~~~~~~~~~p~~~~~~~~~~~~~~~~~~~e~sI~~~yl~aI~~Ak~~IYIenqYFi~~~~~ 590 (645)
...+...+|+.+....+ + .+..+..+|+.+|.+|+++|||+||||+|+.
T Consensus 237 ------~~~~~~~~~v~p~~~~~-----~------------------~~~~i~~~~~~lI~~A~~~I~I~tpYf~p~~-- 285 (458)
T 3hsi_A 237 ------AVKLPNVLSVSPLFGLG-----A------------------SGNELNQVIEDLFLQVQKKLVICTPYFNFPR-- 285 (458)
T ss_dssp ------CBSSCSSCEEEEEEEES-----S------------------SSCHHHHHHHHHHHTCSSEEEEECSSSCCCH--
T ss_pred ------cCCCCceEEEecCCCCC-----C------------------chhHHHHHHHHHHHhcccEEEEEEeccCCCH--
Confidence 00011234554421101 0 1356899999999999999999999999984
Q ss_pred CCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEecCCC
Q 006430 591 WPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWP 631 (645)
Q Consensus 591 ~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP~~p 631 (645)
+++++|..|++|||+ |+||+|...
T Consensus 286 ---------------~~~~aL~~Aa~rGV~--VrIi~~~~~ 309 (458)
T 3hsi_A 286 ---------------TLQHKIATLLENGKR--VEIIVGDKV 309 (458)
T ss_dssp ---------------HHHHHHHHHHTTTCE--EEEEEECGG
T ss_pred ---------------HHHHHHHHHHHCCCe--EEEEECCcc
Confidence 899999999999987 889999883
No 3
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.80 E-value=3.8e-19 Score=203.38 Aligned_cols=139 Identities=15% Similarity=0.155 Sum_probs=107.4
Q ss_pred chHHHHHHHHHhccc-----eEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccC
Q 006430 242 TCWEDICHAISEAHH-----LIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLG 316 (645)
Q Consensus 242 ~~f~~l~~aI~~Ak~-----~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~ 316 (645)
+.|+.+++.|++|++ +|+|+.|++.+ ...+.++|++||++||+|+||+ |..+.+..
T Consensus 347 ~sf~~v~~~I~~A~~dp~v~~I~it~Y~~~~----------------d~~I~~AL~~AA~rGV~VrVLv-d~~a~~~~-- 407 (687)
T 1xdp_A 347 HTFEHVLELLRQASFDPSVLAIKINIYRVAK----------------DSRIIDSMIHAAHNGKKVTVVV-ELQARFDE-- 407 (687)
T ss_dssp BCTHHHHHHHHHHHHCTTEEEEEEEESSCCT----------------TCHHHHHHHHHHHTTCEEEEEE-CTTCSSTT--
T ss_pred hhhhhHHHHHHHHhhCCcceEEEEEeeeecC----------------cHHHHHHHHHHHhcCCEEEEEE-CCCcccch--
Confidence 568999999999997 99998887643 1699999999999999999996 98763211
Q ss_pred ccCCCccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecceeeccceEEEeccCCCCCCcceE---EEEccccC
Q 006430 317 VKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKIT---AFIGGIDL 393 (645)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~~~v---afvGG~ni 393 (645)
..+..+.+.|..+||++... .+ .+++|+|++|||++.. ..+ ||+||+|+
T Consensus 408 --------~~n~~~~~~L~~aGV~V~~~--~~--------------~~k~H~Ki~VID~re~----~~i~~~a~iGS~N~ 459 (687)
T 1xdp_A 408 --------EANIHWAKRLTEAGVHVIFS--AP--------------GLKIHAKLFLISRKEN----GEVVRYAHIGTGNF 459 (687)
T ss_dssp --------TTTTTTTHHHHHHTCEEEEC--CT--------------TCEECCEEEEEEEEET----TEEEEEEEEESSCS
T ss_pred --------hhHHHHHHHHHHCCCEEEEe--cC--------------CccccceEEEEEeccC----CeEEEEEEEeCCcC
Confidence 01234667788899998741 11 2478999999995210 026 99999998
Q ss_pred CCCCCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeCh-HHHHHHHHHHHHHhhh
Q 006430 394 CDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP-AAYDVLINFEQRWRKA 459 (645)
Q Consensus 394 ~~~r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gp-av~dl~~~F~~rWn~~ 459 (645)
.+..+ ..|+|+++.++|| +|.+++..|...|..+
T Consensus 460 d~rs~--------------------------------~~n~D~~l~i~~~~i~~~l~~~F~~~~~~s 494 (687)
T 1xdp_A 460 NEKTA--------------------------------RLYTDYSLLTADARITNEVRRVFNFIENPY 494 (687)
T ss_dssp CTTGG--------------------------------GTEEEEEEEECCHHHHHHHHHHHHHHHCTT
T ss_pred Ccchh--------------------------------hhcceEEEEEeCHHHHHHHHHHHHHHHhhc
Confidence 77211 2589999999987 6999999999999764
No 4
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=99.79 E-value=1.2e-19 Score=206.04 Aligned_cols=207 Identities=12% Similarity=0.140 Sum_probs=145.7
Q ss_pred cchHHHHHHHHHhccc-----eEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCcc
Q 006430 241 GTCWEDICHAISEAHH-----LIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKL 315 (645)
Q Consensus 241 ~~~f~~l~~aI~~Ak~-----~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~ 315 (645)
.+.|+.++++|++|++ +|.++.|++.. ...|.++|++||++||+|++|+ | .++...
T Consensus 351 ~~sf~~vi~~I~~A~~DP~V~sIk~tlYr~~~----------------ds~Iv~ALi~AA~rGv~V~vLv-e-l~arfd- 411 (705)
T 2o8r_A 351 YYTYDYVVRLLMEAAISPDVSEIRLTQYRVAE----------------NSSIISALEAAAQSGKKVSVFV-E-LKARFD- 411 (705)
T ss_dssp TBCSHHHHHHHHHHHTCTTEEEEEEEESCCCS----------------CCHHHHHHHHHHHTTCEEEEEE-C-CCSCC--
T ss_pred hHhHHHHHHHHHHhccCCCceEEEEEEEEEcC----------------CHHHHHHHHHHHHCCCEEEEEE-e-CCCCcc-
Confidence 4679999999999999 99999998743 2699999999999999999996 9 665431
Q ss_pred CccCCCccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecceeeccceEEEeccC--CCCCCcceEEEEccccC
Q 006430 316 GVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQ--ASGNNRKITAFIGGIDL 393 (645)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~--~~~~~~~~vafvGG~ni 393 (645)
...+..+.+.|+++||+|... + .++++|+|++|||++ ..|.- +..+++|.-|+
T Consensus 412 --------ee~ni~wa~~Le~aGv~Vv~g--~--------------~~lk~H~Ki~lIdrr~~~~g~~-~~y~~igtGN~ 466 (705)
T 2o8r_A 412 --------EENNLRLSERMRRSGIRIVYS--M--------------PGLKVHAKTALILYHTPAGERP-QGIALLSTGNF 466 (705)
T ss_dssp -----------CHHHHHHHHHHTCEEEEC--C--------------TTCCBCCCEEEEEECCCSSSCC-CEEEEEESSCS
T ss_pred --------hhhhHHHHHHHHHCCCEEEEc--c--------------CCCCceeEEEEEecccccCCce-eEEEeccccce
Confidence 112467889999999999741 1 246899999999985 11100 11122221111
Q ss_pred CCCCCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeCh-HHHHHHHHHHHHHhhhcccchhhhhhccc
Q 006430 394 CDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP-AAYDVLINFEQRWRKATKLTELTFKFKRV 472 (645)
Q Consensus 394 ~~~r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gp-av~dl~~~F~~rWn~~~~~~~~~~~~~~~ 472 (645)
.+ ....-|.|+++...+| +|.|++..|...|......
T Consensus 467 n~--------------------------------~tariy~D~~l~t~~~~i~~dl~~vF~~~tg~~~~~---------- 504 (705)
T 2o8r_A 467 NE--------------------------------TTARIYSDTTLMTANTDIVHDVYRLFRILDGDPEPA---------- 504 (705)
T ss_dssp SC--------------------------------CCSSCEEEEEEEECCHHHHHHHHHHHHHHTTCCCCS----------
T ss_pred ee--------------------------------eEEEEEeeeeeeecChHHHHHHHHHHHHHhCCCCCC----------
Confidence 11 0112477888877775 7799999996666421000
Q ss_pred ccccccccccccccccccCccccccCCCccccCCCCcccccccCCCCCceeeEEEeeccCCCCCCCCCCchhhhcccccc
Q 006430 473 SHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLIC 552 (645)
Q Consensus 473 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~vQv~rs~~~~~~~~~p~~~~~~~~~~~~~ 552 (645)
. ..|++.+ |..
T Consensus 505 ------------------------------------------------~-~~~l~~s---------P~~----------- 515 (705)
T 2o8r_A 505 ------------------------------------------------R-FSRLLVA---------RYN----------- 515 (705)
T ss_dssp ------------------------------------------------C-CSSCEET---------TTT-----------
T ss_pred ------------------------------------------------C-ceEEEEC---------Cch-----------
Confidence 0 0122221 211
Q ss_pred ccCccchhHHHHHHHHHHHhccc----eEEEeeeeecccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEe
Q 006430 553 AKDVVIDKSIQTAYIQAIRSAQH----FIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVII 627 (645)
Q Consensus 553 ~~~~~~e~sI~~~yl~aI~~Ak~----~IYIenqYFi~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~Ivl 627 (645)
....|.+.+..+|.+|++ +|+|.++| +++ ++|++||..|+++||+ |.||+
T Consensus 516 -----~~~~i~~~i~~eI~~Ak~G~~a~I~ik~n~-l~D-----------------~~ii~aL~~As~~GV~--V~LIV 569 (705)
T 2o8r_A 516 -----MGEAITNLIEREIENVKRGKRGYMLLKMNG-LQD-----------------KNVITQLYRASEAGVE--IDLIV 569 (705)
T ss_dssp -----HHHHHHHHHHHHHHHHHTTCCCEEEEEESC-BCC-----------------HHHHHHHHHHHHTTCE--EEEEE
T ss_pred -----HHHHHHHHHHHHHHHHhcCCCCEEEEEcCC-CCC-----------------HHHHHHHHHHHHCCCe--EEEEE
Confidence 246789999999999999 99999999 776 4899999999999987 77888
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.79 E-value=3.6e-19 Score=168.53 Aligned_cols=130 Identities=22% Similarity=0.368 Sum_probs=106.2
Q ss_pred ceeEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC
Q 006430 10 EKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP 89 (645)
Q Consensus 10 ~~~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~ 89 (645)
..+..+.|.|.|+|++|++|+++|..+.++ +|. +..+.+||||++.++
T Consensus 22 ~~~~~~~g~L~V~VieA~~L~~~D~~~~~~--~f~------------------------------~~~g~sDPYv~v~l~ 69 (157)
T 2fk9_A 22 SGTMKFNGYLRVRIGEAVGLQPTRWSLRHS--LFK------------------------------KGHQLLDPYLTVSVD 69 (157)
T ss_dssp --CCCEEEEEEEEEEEEECCCCCHHHHHTT--TSS------------------------------SSCCCCCEEEEEEET
T ss_pred chhccCccEEEEEEEEEECCCCcccccccc--ccc------------------------------cCCCCCCeEEEEEEC
Confidence 346688999999999999999877543211 111 012348999999999
Q ss_pred CeeeeeeccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccCC----ceeEEEEEccCCCC
Q 006430 90 QATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATG----ELISRWYDIIAPSG 164 (645)
Q Consensus 90 ~~~~~kT~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~----~~~~~w~~l~~~~~ 164 (645)
+.+..||+++++|.||+|||+|.|.+.. ...|.|+|||++.++ +++||.+.|+|.++..+ ...+.||+|. +
T Consensus 70 ~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~-~-- 145 (157)
T 2fk9_A 70 QVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE-P-- 145 (157)
T ss_dssp TEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB-S--
T ss_pred CEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC-C--
Confidence 8877899999999999999999999875 458999999999998 89999999999999854 6789999992 2
Q ss_pred CCCCCCceEEEEEEEE
Q 006430 165 SPPKPGASIQLELKFT 180 (645)
Q Consensus 165 ~~~~~~g~l~l~l~f~ 180 (645)
.|+|+|+++|.
T Consensus 146 -----~G~i~l~l~~~ 156 (157)
T 2fk9_A 146 -----EGKVFVVITLT 156 (157)
T ss_dssp -----SCEEEEEEEEC
T ss_pred -----CcEEEEEEEEE
Confidence 49999999874
No 6
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1.7e-18 Score=160.03 Aligned_cols=124 Identities=28% Similarity=0.484 Sum_probs=107.3
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCeeee
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVA 94 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~~~~ 94 (645)
..|.|.|+|++|++|+.++. +. +||||++.+.+.+ .
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~------------------------------------------~dpyv~v~~~~~~-~ 40 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GK------------------------------------------PDPIVSVIFKDEK-K 40 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SC------------------------------------------CCEEEEEECSSCE-E
T ss_pred CCcEEEEEEEEeeCCCCCCC-CC------------------------------------------CCeEEEEEECCEe-E
Confidence 46899999999999998776 43 8999999998865 7
Q ss_pred eeccccCCCCCeeeeEEEEeecCC----CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEE---ccCCCCCC
Q 006430 95 RTRVLKNSQEPVWNEHFNIPLAHP----LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYD---IIAPSGSP 166 (645)
Q Consensus 95 kT~v~~~t~~P~w~e~f~~~~~~~----~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~---l~~~~~~~ 166 (645)
||++++++.||+|||+|.|.+..+ ...|.|+|||++.++ +++||++.|++.++..+...+.|++ |.+..+.
T Consensus 41 kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~- 119 (140)
T 2dmh_A 41 KTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQ- 119 (140)
T ss_dssp ECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCC-
T ss_pred EeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCC-
Confidence 999999999999999999998753 567999999999997 8999999999999988888889988 6555443
Q ss_pred CCCCceEEEEEEEEeCCC
Q 006430 167 PKPGASIQLELKFTPCDK 184 (645)
Q Consensus 167 ~~~~g~l~l~l~f~p~~~ 184 (645)
+..|+|+|+++|.|...
T Consensus 120 -~~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 120 -DTGATIDLVIGYDPPSG 136 (140)
T ss_dssp -EEEEEEEEEEEECCCBS
T ss_pred -CCCCEEEEEEEEECCCC
Confidence 34599999999999654
No 7
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=1.9e-18 Score=162.22 Aligned_cols=124 Identities=21% Similarity=0.368 Sum_probs=100.6
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~---- 90 (645)
..+.|.|+|++|++|+.++..+. +||||++.+..
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~ 55 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGA------------------------------------------SDPYVRVTLYDPMNG 55 (153)
T ss_dssp TCEEEEEEEEEEESCC-------------------------------------------------CCEEEEEEEEETTTE
T ss_pred CccEEEEEEEEeeCCCCCCCCCC------------------------------------------CCcEEEEEEECCCCc
Confidence 45789999999999998776554 89999999863
Q ss_pred -eeeeeeccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccCCcee------EEEEEccCC
Q 006430 91 -ATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELI------SRWYDIIAP 162 (645)
Q Consensus 91 -~~~~kT~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~------~~w~~l~~~ 162 (645)
....+|++++++.||+|||+|.|.+......|.|+|||++.++ +++||++.|+|.++..+... ..||+|...
T Consensus 56 ~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~ 135 (153)
T 3b7y_A 56 VLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPR 135 (153)
T ss_dssp EEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCS
T ss_pred cceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccc
Confidence 3568999999999999999999999988788999999999987 89999999999999865432 589999443
Q ss_pred CCCCCCCCceEEEEEEEEe
Q 006430 163 SGSPPKPGASIQLELKFTP 181 (645)
Q Consensus 163 ~~~~~~~~g~l~l~l~f~p 181 (645)
. +..+..|+|+|+++|.|
T Consensus 136 ~-~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 136 S-HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp S-TTCCCCSEEEEEEEECC
T ss_pred c-CCCCcceEEEEEEEEeC
Confidence 3 33356799999999986
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=2.8e-18 Score=157.38 Aligned_cols=129 Identities=24% Similarity=0.358 Sum_probs=110.1
Q ss_pred CCCceeEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEE
Q 006430 7 SDKEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTV 86 (645)
Q Consensus 7 ~~~~~~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v 86 (645)
+.+.......|.|.|+|++|++|+.++..+. +||||++
T Consensus 3 ~~s~~~~~~~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v 40 (133)
T 2ep6_A 3 SGSSGDVKDVGILQVKVLKAADLLAADFSGK------------------------------------------SDPFCLL 40 (133)
T ss_dssp SCCCCSCCCSEEEEEEEEEEESCCCSSSSSC------------------------------------------CCEEEEE
T ss_pred cccccccCCceEEEEEEEeeECCCCCCCCCC------------------------------------------cCeEEEE
Confidence 3445556678999999999999998776554 8999999
Q ss_pred EECCeeeeeeccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCCCCC
Q 006430 87 VVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGS 165 (645)
Q Consensus 87 ~l~~~~~~kT~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~~ 165 (645)
.+.+.+ .+|++++++.||+|||+|.|.+......|.|+|||++.++ +++||++.+++.++..+. ..||+|....++
T Consensus 41 ~~~~~~-~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~ 117 (133)
T 2ep6_A 41 ELGNDR-LQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLE 117 (133)
T ss_dssp EETTEE-EECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTT
T ss_pred EECCEE-EEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCC
Confidence 998865 6999999999999999999999987788999999999997 899999999999998654 589999654433
Q ss_pred CCCCCceEEEEEEEEe
Q 006430 166 PPKPGASIQLELKFTP 181 (645)
Q Consensus 166 ~~~~~g~l~l~l~f~p 181 (645)
.+..|+|+|+++|..
T Consensus 118 -~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 118 -QAFKGVIYLEMDLIY 132 (133)
T ss_dssp -SCCSSEEEEEEEEEE
T ss_pred -CccceEEEEEEEEEe
Confidence 356799999999864
No 9
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.77 E-value=1.2e-18 Score=160.21 Aligned_cols=125 Identities=24% Similarity=0.483 Sum_probs=108.1
Q ss_pred EEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCeee
Q 006430 14 YLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATV 93 (645)
Q Consensus 14 ~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~~~ 93 (645)
...|.|.|+|++|++|+.++..+. +||||++.+.+..
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~- 43 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNN------------------------------------------MDPYVQLTCRTQD- 43 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCS------------------------------------------SCCCEEEESSSCE-
T ss_pred CCcEEEEEEEEeccCCCCcccCCC------------------------------------------cCceEEEEECCcc-
Confidence 357899999999999998776654 8999999998865
Q ss_pred eeecccc-CCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccc-cCCceeEEEEEccCCCCCCCCCC
Q 006430 94 ARTRVLK-NSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTI-ATGELISRWYDIIAPSGSPPKPG 170 (645)
Q Consensus 94 ~kT~v~~-~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l-~~~~~~~~w~~l~~~~~~~~~~~ 170 (645)
.+|++++ ++.||+|||+|.|.+......|.|+|||++.++ +++||++.|+|.++ ..+.....||+|. ..+ +..
T Consensus 44 ~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~---~~~ 119 (136)
T 1wfj_A 44 QKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDE---EYK 119 (136)
T ss_dssp EECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETT---EEE
T ss_pred ceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCC---ccC
Confidence 5999998 899999999999999987788999999999987 89999999999999 4566678899996 322 456
Q ss_pred ceEEEEEEEEeCCCC
Q 006430 171 ASIQLELKFTPCDKN 185 (645)
Q Consensus 171 g~l~l~l~f~p~~~~ 185 (645)
|+|+|+++|.|....
T Consensus 120 G~i~l~l~~~p~~~~ 134 (136)
T 1wfj_A 120 GEIWVALSFKPSGPS 134 (136)
T ss_dssp EEEEEEEEEEECCSC
T ss_pred EEEEEEEEEEeCCCC
Confidence 999999999997543
No 10
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.77 E-value=1.1e-17 Score=156.16 Aligned_cols=123 Identities=23% Similarity=0.438 Sum_probs=104.7
Q ss_pred EEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCee
Q 006430 13 IYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQAT 92 (645)
Q Consensus 13 ~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~~ 92 (645)
....|.|.|+|++|++|+.++..+. +||||++.++...
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~ 50 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGS------------------------------------------SDPYVTVQVGKTK 50 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEETTEE
T ss_pred cccccEEEEEEEeeeCCCCCCCCCC------------------------------------------cCeEEEEEECCEE
Confidence 4457999999999999998876654 9999999998765
Q ss_pred eeeeccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCC-----------C-CeeeeeEeeccccccCCceeEEEEEcc
Q 006430 93 VARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVF-----------G-AQIIGTAAIPAHTIATGELISRWYDII 160 (645)
Q Consensus 93 ~~kT~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~-----------~-~~~iG~~~i~l~~l~~~~~~~~w~~l~ 160 (645)
.+|++++++.||.|||+|.|.+..+...|.|+|||++.. + +++||++.+++.++. ...+.||+|.
T Consensus 51 -~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~ 127 (148)
T 3kwu_A 51 -KRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLD 127 (148)
T ss_dssp -EECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECB
T ss_pred -EECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcc
Confidence 699999999999999999999988888899999999985 4 999999999999984 4568999995
Q ss_pred CCCCCCCCCCceEEEEEEEEe
Q 006430 161 APSGSPPKPGASIQLELKFTP 181 (645)
Q Consensus 161 ~~~~~~~~~~g~l~l~l~f~p 181 (645)
+.+......|+|+|+++|..
T Consensus 128 -~~~~~~~~~G~i~l~l~~e~ 147 (148)
T 3kwu_A 128 -KRTDKSAVSGAIRLHISVEI 147 (148)
T ss_dssp -CSSTTCCCCCEEEEEEEEEC
T ss_pred -cCCCCCCCceEEEEEEEEEe
Confidence 43443456799999999863
No 11
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.77 E-value=3e-18 Score=157.93 Aligned_cols=129 Identities=19% Similarity=0.408 Sum_probs=104.9
Q ss_pred EEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCeee
Q 006430 14 YLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATV 93 (645)
Q Consensus 14 ~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~~~ 93 (645)
.+.|.|.|+|++|++|++++..+.+. + |.. .+.+.+||||++.+++...
T Consensus 3 ~~~g~L~v~v~~a~~L~~~d~~~~~~---~--------------------g~~--------~~~~~~DPyv~v~l~~~~~ 51 (136)
T 1gmi_A 3 VFNGLLKIKICEAVSLKPTAWSLRDA---V--------------------GPR--------PQTFLLDPYIALNVDDSRI 51 (136)
T ss_dssp CEEEEEEEEEEEEESCCCCHHHHCC----C--------------------CSS--------CCCCCCCEEEEEEETTEEE
T ss_pred ccceEEEEEEEeCcCCCCcccccccc---c--------------------ccc--------cCCcCcCcEEEEEECCeEe
Confidence 56899999999999999877543210 0 000 0123489999999998877
Q ss_pred eeeccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccCC--ceeEEEEEccCCCCCCCCCC
Q 006430 94 ARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATG--ELISRWYDIIAPSGSPPKPG 170 (645)
Q Consensus 94 ~kT~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~--~~~~~w~~l~~~~~~~~~~~ 170 (645)
.+|++++++.||+|||+|.|.+... ..|.|+|||++.++ +++||++.|++.++..+ ...+.|++| . +.
T Consensus 52 ~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L-~-------~~ 122 (136)
T 1gmi_A 52 GQTATKQKTNSPAWHDEFVTDVCNG-RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDL-E-------PE 122 (136)
T ss_dssp EECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEEC-B-------SS
T ss_pred eeeeEECCCcCCccCCEEEEEecCC-CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEc-C-------CC
Confidence 8999999999999999999998765 78999999999987 89999999999999853 345899998 2 35
Q ss_pred ceEEEEEEEEeC
Q 006430 171 ASIQLELKFTPC 182 (645)
Q Consensus 171 g~l~l~l~f~p~ 182 (645)
|+|+|+++|.+.
T Consensus 123 G~i~l~l~~~~~ 134 (136)
T 1gmi_A 123 GKVYVIIDLSGS 134 (136)
T ss_dssp CEEEEEEEEEEE
T ss_pred eEEEEEEEEEec
Confidence 999999999874
No 12
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.75 E-value=1.1e-17 Score=161.06 Aligned_cols=124 Identities=20% Similarity=0.371 Sum_probs=98.6
Q ss_pred ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC-----
Q 006430 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ----- 90 (645)
Q Consensus 16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~----- 90 (645)
.|.|.|+|++|++|+.++..+. +||||++.+..
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~g~------------------------------------------~DPyv~v~l~~~~~~~ 44 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDILGA------------------------------------------SDPYVRVTLYDPMSGI 44 (176)
T ss_dssp CEEEEEEEEEEESCC---CCCC------------------------------------------CCEEEEEEEEETTTEE
T ss_pred cEEEEEEEEEeeCCCCcCCCCC------------------------------------------cCcEEEEEEECCCCCc
Confidence 4789999999999998876654 99999999864
Q ss_pred eeeeeeccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccCCcee-E-----EEEEccCCC
Q 006430 91 ATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELI-S-----RWYDIIAPS 163 (645)
Q Consensus 91 ~~~~kT~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~-~-----~w~~l~~~~ 163 (645)
..+.+|++++++.||+|||+|.|.+......|.|+|||++.++ +++||++.|+|..+..+... + .||+|.. .
T Consensus 45 ~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~-~ 123 (176)
T 3m7f_B 45 LTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHP-R 123 (176)
T ss_dssp EEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBC-S
T ss_pred ccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccc-c
Confidence 1567999999999999999999999987788999999999987 89999999999999865433 2 7999953 3
Q ss_pred CCCCCCCceEEEEEEEEeC
Q 006430 164 GSPPKPGASIQLELKFTPC 182 (645)
Q Consensus 164 ~~~~~~~g~l~l~l~f~p~ 182 (645)
....+..|+|+|+++|.|.
T Consensus 124 ~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 124 SHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp STTCCCCSEEEEEEEECC-
T ss_pred CCCCccCEEEEEEEEEEeC
Confidence 3334567999999999997
No 13
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.75 E-value=2e-18 Score=169.54 Aligned_cols=134 Identities=13% Similarity=0.190 Sum_probs=101.9
Q ss_pred cchHHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccCccCC
Q 006430 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTP 320 (645)
Q Consensus 241 ~~~f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~~~~~ 320 (645)
++.|..|+++|++||++|+|+.|+|+. ..|.++|.+|++|||+||||+ |......
T Consensus 45 ~~~~~~ll~~I~~A~~sI~i~~y~~~~-----------------~~i~~aL~~aa~rGV~Vrii~-D~~~~~~------- 99 (196)
T 4ggj_A 45 ESSLSRLLRALLAARSSLELCLFAFSS-----------------PQLGRAVQLLHQRGVRVRVIT-DCDYMAL------- 99 (196)
T ss_dssp CCHHHHHHHHHHTCSSEEEEEESCBCC-----------------HHHHHHHHHHHHTTCEEEEEE-SSCCC---------
T ss_pred HHHHHHHHHHHHHhheEEEEEEEEeCC-----------------HHHHHHHHHHHHcCCcEEEEE-ecccccc-------
Confidence 578999999999999999999998842 589999999999999999996 8642211
Q ss_pred CccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecceeeccceEEEeccCCCCCCcceEEEEccccCCCCCCCC
Q 006430 321 GVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDT 400 (645)
Q Consensus 321 ~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~~~vafvGG~ni~~~r~d~ 400 (645)
.......|..+||++..... ....|+|++|||++ ++|+||+|++...+.
T Consensus 100 ------~~~~~~~l~~~gi~v~~~~~----------------~~~~H~K~~viD~~--------~~~~GS~N~t~~~~~- 148 (196)
T 4ggj_A 100 ------NGSQIGLLRKAGIQVRHDQD----------------LGYMHHKFAIVDKK--------VLITGSLNWTTQAIQ- 148 (196)
T ss_dssp -------CCHHHHHHHTTCEEEECCS----------------SSCCCCEEEEETTT--------EEEEESCCBCHHHHH-
T ss_pred ------cHHHHHHHHhcCCCcccccc----------------cccccCcEEEEcce--------EEEecCccCChhhhc-
Confidence 12245668889999874211 12569999999998 999999998873221
Q ss_pred CCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEe-ChHHHHHHHHHHHHHhhhcc
Q 006430 401 PEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLD-GPAAYDVLINFEQRWRKATK 461 (645)
Q Consensus 401 ~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~-Gpav~dl~~~F~~rWn~~~~ 461 (645)
..| +..+.+. +++|..+...|.+.|+.+..
T Consensus 149 ------------------------------~n~-E~~~~i~~~~~~~~~~~~F~~~W~~~~p 179 (196)
T 4ggj_A 149 ------------------------------NNR-ENVLIMEDTEYVRLFLEEFERIWEEFDP 179 (196)
T ss_dssp ------------------------------HCC-EEEEEECCHHHHHHHHHHHHHHHHHTCC
T ss_pred ------------------------------ccc-eeEEEEECHHHHHHHHHHHHHHHHhCCC
Confidence 123 3444455 55899999999999998654
No 14
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=1.3e-17 Score=151.05 Aligned_cols=118 Identities=25% Similarity=0.424 Sum_probs=97.5
Q ss_pred ceEEEEEEEEeeCCCCCC---CCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC--
Q 006430 16 HGDLDLKIIRARRLPNMD---MMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ-- 90 (645)
Q Consensus 16 ~g~L~v~i~~a~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~-- 90 (645)
.|.|.|+|++|++|+.++ ..+ .+||||++.+.+
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g------------------------------------------~~dpyv~v~~~~~~ 39 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLD------------------------------------------TPDPYVELFISTTP 39 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHC------------------------------------------CCCEEEEEECTTST
T ss_pred CcEEEEEEEeeeCCCCCCccccCC------------------------------------------CCCCEEEEEEccCC
Confidence 478999999999999742 222 289999999986
Q ss_pred eeeeeeccccCCCCCeeeeEEEEeecC-CCCeEEEEEEEcCCCCCeeeeeEeeccccccCCceeEEEEEccCCCCCCCCC
Q 006430 91 ATVARTRVLKNSQEPVWNEHFNIPLAH-PLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKP 169 (645)
Q Consensus 91 ~~~~kT~v~~~t~~P~w~e~f~~~~~~-~~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~~~~~~ 169 (645)
....||++++++.||+|||+|.|.+.. ....|.|+|||++.+++++||++.++|.++..+.....|++|. +. .
T Consensus 40 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~-~~-----~ 113 (126)
T 1rlw_A 40 DSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFN-QV-----T 113 (126)
T ss_dssp TCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSSCCEEEEEEEEEGGGSCTTCEEEEEEEET-TT-----E
T ss_pred CceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHccCCCcEEEEEEcC-CC-----c
Confidence 356799999999999999999999954 4567999999999888999999999999999898899999993 32 2
Q ss_pred CceEEEEEEEEe
Q 006430 170 GASIQLELKFTP 181 (645)
Q Consensus 170 ~g~l~l~l~f~p 181 (645)
.|+|+|++.-.|
T Consensus 114 ~g~i~~~le~~~ 125 (126)
T 1rlw_A 114 EMVLEMSLEVAS 125 (126)
T ss_dssp EEEEEEEEECCC
T ss_pred eEEEEEEEEeCC
Confidence 366666665443
No 15
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.71 E-value=1.4e-16 Score=145.78 Aligned_cols=120 Identities=19% Similarity=0.357 Sum_probs=99.2
Q ss_pred eEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC-eeeee
Q 006430 17 GDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ-ATVAR 95 (645)
Q Consensus 17 g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~-~~~~k 95 (645)
..|.|+|++|++|++++..+. +||||++.+.+ ....+
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~------------------------------------------sDpyv~v~~~~~~~~~k 42 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRL------------------------------------------PDPFAKIVVDGSGQCHS 42 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCC------------------------------------------CCEEEEEEETTTCCEEE
T ss_pred EEEEEEEEEeECCCCCCCCCC------------------------------------------cCeEEEEEECCCCceEE
Confidence 469999999999998887664 89999999975 45689
Q ss_pred eccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC----CeeeeeEeecccccc-CCceeEEEEEccCCC-CCCCCC
Q 006430 96 TRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG----AQIIGTAAIPAHTIA-TGELISRWYDIIAPS-GSPPKP 169 (645)
Q Consensus 96 T~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~----~~~iG~~~i~l~~l~-~~~~~~~w~~l~~~~-~~~~~~ 169 (645)
|++++++.||+|||+|.|.+.... .|.|+|||++.++ +++||++.|++..+. .+.....|++|.... .++.+.
T Consensus 43 T~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~ 121 (132)
T 3pyc_A 43 TDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAV 121 (132)
T ss_dssp CCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCC
T ss_pred CCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCce
Confidence 999999999999999999998764 5999999999886 699999999999883 334446899996542 233456
Q ss_pred CceEEEEEEE
Q 006430 170 GASIQLELKF 179 (645)
Q Consensus 170 ~g~l~l~l~f 179 (645)
.|+|+|++++
T Consensus 122 ~G~i~v~l~~ 131 (132)
T 3pyc_A 122 RGQIVVSLQT 131 (132)
T ss_dssp CSEEEEEEEE
T ss_pred eEEEEEEEEc
Confidence 8999999875
No 16
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.70 E-value=7.6e-17 Score=155.15 Aligned_cols=131 Identities=17% Similarity=0.272 Sum_probs=103.5
Q ss_pred eEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCe
Q 006430 12 VIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQA 91 (645)
Q Consensus 12 ~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~ 91 (645)
.....+.|.|+|++|++|+..+..+. +||||++.+++
T Consensus 31 ~~~~~~~L~V~V~~A~~L~~~~~~~~------------------------------------------sDPYv~v~~~~- 67 (173)
T 2nq3_A 31 SLTMKSQLQITVISAKLKENKKNWFG------------------------------------------PSPYVEVTVDG- 67 (173)
T ss_dssp CCSCCEEEEEEEEEEEECCCC--CCC------------------------------------------CCEEEEEEETT-
T ss_pred ccCCceEEEEEEEEeECCCCcccCCC------------------------------------------CCeEEEEEECC-
Confidence 34567889999999999984332222 89999999988
Q ss_pred eeeeeccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccCCc-----eeEEEEEccCCCCC
Q 006430 92 TVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGE-----LISRWYDIIAPSGS 165 (645)
Q Consensus 92 ~~~kT~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~-----~~~~w~~l~~~~~~ 165 (645)
.+.||++++++.||+|||+|.|.+.+ ...|.|+|||++.++ +++||++.++|.++..+. ....|++|.... .
T Consensus 68 ~~~kT~v~~~tlnP~Wne~f~f~v~~-~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~-~ 145 (173)
T 2nq3_A 68 QSKKTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDK-E 145 (173)
T ss_dssp EEEECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESS-C
T ss_pred EEeEccccCCCCCCeECCEEEEEeCC-CCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCC-C
Confidence 55799999999999999999999964 778999999999987 899999999999986321 236799996542 2
Q ss_pred CCCCCceEEEEEEEEeCCCCCc
Q 006430 166 PPKPGASIQLELKFTPCDKNPL 187 (645)
Q Consensus 166 ~~~~~g~l~l~l~f~p~~~~~~ 187 (645)
..+..|+|.+.++|.+......
T Consensus 146 ~~~~~G~L~v~l~~l~~~~~~~ 167 (173)
T 2nq3_A 146 PTETIGDLSICLDGLQLESEVV 167 (173)
T ss_dssp TTSEEEEEEEEEESEECC----
T ss_pred CCcccEEEEEEEeeeecchhhc
Confidence 3456799999999998754443
No 17
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.67 E-value=4.9e-16 Score=142.90 Aligned_cols=109 Identities=17% Similarity=0.412 Sum_probs=93.3
Q ss_pred CceeEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEE
Q 006430 9 KEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVV 88 (645)
Q Consensus 9 ~~~~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l 88 (645)
.++..+..+.|.|+|++|++|+. +..+. +||||++.+
T Consensus 12 ~~~~~~~~~~L~V~V~~a~~L~~-~~~g~------------------------------------------~DPyv~v~l 48 (134)
T 2b3r_A 12 KLSVSYRNGTLFIMVMHIKDLVT-EDGAD------------------------------------------PNPYVKTYL 48 (134)
T ss_dssp EEEEEEETTEEEEEEEEEECCCC-TTSCC------------------------------------------CCEEEEEEE
T ss_pred EEEEeecCCEEEEEEEEeeCCCC-CCCCC------------------------------------------CCeEEEEEE
Confidence 34557888999999999999985 44443 899999998
Q ss_pred C----CeeeeeeccccCCCCCeeeeEEEEe-ecC---CCCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEc
Q 006430 89 P----QATVARTRVLKNSQEPVWNEHFNIP-LAH---PLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDI 159 (645)
Q Consensus 89 ~----~~~~~kT~v~~~t~~P~w~e~f~~~-~~~---~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l 159 (645)
. ...+.||++++++.||+|||+|.|. +.. ....|.|+|||++.++ +++||++.|+|.++..+...+.||+|
T Consensus 49 ~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L 128 (134)
T 2b3r_A 49 LPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQL 128 (134)
T ss_dssp ESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEEC
T ss_pred EcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEEC
Confidence 2 2345799999999999999999999 664 3468999999999987 89999999999999988888999999
Q ss_pred c
Q 006430 160 I 160 (645)
Q Consensus 160 ~ 160 (645)
.
T Consensus 129 ~ 129 (134)
T 2b3r_A 129 T 129 (134)
T ss_dssp B
T ss_pred C
Confidence 4
No 18
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=7.3e-16 Score=144.62 Aligned_cols=105 Identities=32% Similarity=0.535 Sum_probs=92.1
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC--Cee
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--QAT 92 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~--~~~ 92 (645)
..+.|.|+|++|++|+.++..+. +||||++.+. ...
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~ 77 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGT------------------------------------------SDPYVKVFLLPDKKK 77 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEETTCCS
T ss_pred CCCEEEEEEEEeECCCCccCCCC------------------------------------------cCeEEEEEEEcCCCc
Confidence 46899999999999998776554 8999999994 244
Q ss_pred eeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccC
Q 006430 93 VARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIA 161 (645)
Q Consensus 93 ~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~ 161 (645)
..||++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.|++.++..+...++||+|..
T Consensus 78 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 78 KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred eEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 57999999999999999999998753 567999999999987 8999999999999988888899999953
No 19
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.65 E-value=1.8e-15 Score=156.09 Aligned_cols=126 Identities=29% Similarity=0.491 Sum_probs=108.1
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC--ee
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ--AT 92 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~--~~ 92 (645)
..+.|.|+|++|++|+.++..+. +||||++.+.. ..
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~------------------------------------------~dpyv~v~~~~~~~~ 54 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGT------------------------------------------SDPYVKVFLLPDKKK 54 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSS------------------------------------------CCEEEEEEEETCTTS
T ss_pred CCCEEEEEEEEeeCCCCCCCCCC------------------------------------------CCeEEEEEEEcCCCc
Confidence 56899999999999998876654 99999999953 34
Q ss_pred eeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCCCCCCCC
Q 006430 93 VARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPK 168 (645)
Q Consensus 93 ~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~~~~~ 168 (645)
..+|++++++.||+|||+|.|.+... ...|.|+|||.+.++ +++||++.++|.++..+...+.|++|....+....
T Consensus 55 ~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~ 134 (284)
T 2r83_A 55 KFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQE 134 (284)
T ss_dssp CEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCC
T ss_pred eEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeecccccccc
Confidence 57999999999999999999998753 467999999999987 89999999999999988888999999655443345
Q ss_pred CCceEEEEEEEEeC
Q 006430 169 PGASIQLELKFTPC 182 (645)
Q Consensus 169 ~~g~l~l~l~f~p~ 182 (645)
..|+|++.++|.|.
T Consensus 135 ~~G~i~l~l~~~p~ 148 (284)
T 2r83_A 135 KLGDICFSLRYVPT 148 (284)
T ss_dssp CCCEEEEEEEEETT
T ss_pred ccccEEEEEEecCc
Confidence 67999999999874
No 20
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=8.7e-16 Score=143.54 Aligned_cols=107 Identities=22% Similarity=0.389 Sum_probs=92.9
Q ss_pred eEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC-
Q 006430 12 VIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ- 90 (645)
Q Consensus 12 ~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~- 90 (645)
+.+..+.|.|+|++|++|+.++..+. +||||++.+..
T Consensus 26 l~~~~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~ 63 (149)
T 1a25_A 26 AHIDREVLIVVVRDAKNLVPMDPNGL------------------------------------------SDPYVKLKLIPD 63 (149)
T ss_dssp EEESSSEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEESC
T ss_pred EEecCCEEEEEEEEeeCCCCCCCCCC------------------------------------------cCeEEEEEEECC
Confidence 45678899999999999998776554 89999999963
Q ss_pred ---eeeeeeccccCCCCCeeeeEEEEeecCC--CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccC
Q 006430 91 ---ATVARTRVLKNSQEPVWNEHFNIPLAHP--LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIA 161 (645)
Q Consensus 91 ---~~~~kT~v~~~t~~P~w~e~f~~~~~~~--~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~ 161 (645)
....||++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.|++.++..+ ..++||+|..
T Consensus 64 ~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 64 PKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp TTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 4567999999999999999999998764 357999999999987 89999999999999865 4789999954
No 21
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.65 E-value=8.1e-16 Score=147.48 Aligned_cols=109 Identities=22% Similarity=0.407 Sum_probs=94.5
Q ss_pred eEEEceEEEEEEEEeeCCCCCCC-CchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC
Q 006430 12 VIYLHGDLDLKIIRARRLPNMDM-MSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ 90 (645)
Q Consensus 12 ~~~~~g~L~v~i~~a~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~ 90 (645)
+.|..+.|.|+|++|++|+.++. .+. +||||++.+..
T Consensus 25 l~y~~~~L~V~v~~a~~L~~~d~~~g~------------------------------------------~DPyv~v~l~~ 62 (171)
T 2q3x_A 25 MEDKKGQLEVEVIRARSLTQKPGSKST------------------------------------------PAPYVKVYLLE 62 (171)
T ss_dssp EEEETTEEEEEEEEEESCCCCC---CC------------------------------------------CEEEEEEEEEE
T ss_pred EEECCCEEEEEEEEeeCCCCCCcCCCC------------------------------------------CCceEEEEEEC
Confidence 45678999999999999998774 343 89999999853
Q ss_pred ----eeeeeeccccCCCCCeeeeEEEEeecCCCCeEEEEEE-EcCCCC-CeeeeeEeeccccccCCceeEEEEEccCC
Q 006430 91 ----ATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVK-DDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAP 162 (645)
Q Consensus 91 ----~~~~kT~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~-d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~ 162 (645)
....||++++++.||+|||+|.|.+......|.|+|| |++.++ +++||++.|+|.++..+...++||+|...
T Consensus 63 ~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 63 NGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 2468999999999999999999999877788999999 999987 89999999999999988888999999543
No 22
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=3.3e-16 Score=144.94 Aligned_cols=108 Identities=28% Similarity=0.436 Sum_probs=93.3
Q ss_pred eEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCe
Q 006430 12 VIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQA 91 (645)
Q Consensus 12 ~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~ 91 (645)
+.|..|.|.|+|++|++|+.++..+. +||||++.+.+.
T Consensus 13 l~y~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~Dpyv~v~~~~~ 50 (142)
T 1rh8_A 13 INYDLGNLIIHILQARNLVPRDNNGY------------------------------------------SDPFVKVYLLPG 50 (142)
T ss_dssp EEEETTEEEEEEEEEESCCCCSSSSC------------------------------------------SCCEEEEEETTS
T ss_pred EEEcCCEEEEEEEEecCCCCCCCCCC------------------------------------------CCceEEEEEecC
Confidence 46778999999999999998876654 899999999763
Q ss_pred -------------eeeeeccccCCCCCeeeeEEEEe-ecC---CCCeEEEEEEEcCCCC-CeeeeeEeeccccccCCcee
Q 006430 92 -------------TVARTRVLKNSQEPVWNEHFNIP-LAH---PLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELI 153 (645)
Q Consensus 92 -------------~~~kT~v~~~t~~P~w~e~f~~~-~~~---~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~ 153 (645)
...||++++++.||+|||+|.|. +.. ....|.|+|||++.++ +++||++.|+|.++..+...
T Consensus 51 ~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~ 130 (142)
T 1rh8_A 51 RGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNT 130 (142)
T ss_dssp SCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTC
T ss_pred CCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCC
Confidence 24799999999999999999997 543 3567999999999987 89999999999999877778
Q ss_pred EEEEEccC
Q 006430 154 SRWYDIIA 161 (645)
Q Consensus 154 ~~w~~l~~ 161 (645)
..||+|..
T Consensus 131 ~~W~~L~~ 138 (142)
T 1rh8_A 131 PRWYPLKE 138 (142)
T ss_dssp CEEEECBC
T ss_pred CeEEECCc
Confidence 89999953
No 23
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.64 E-value=1e-15 Score=140.50 Aligned_cols=108 Identities=22% Similarity=0.401 Sum_probs=92.9
Q ss_pred eEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC--
Q 006430 12 VIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP-- 89 (645)
Q Consensus 12 ~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~-- 89 (645)
+.+..|.|.|+|++|++|+.++..+. +||||++.+.
T Consensus 11 l~~~~~~L~v~v~~a~~L~~~d~~~~------------------------------------------~dpyv~v~~~~~ 48 (137)
T 3rdl_A 11 AEVTDEKLHVTVRDAKNLIPMDPNGL------------------------------------------SDPYVKLKLIPD 48 (137)
T ss_dssp EEEETTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEECC
T ss_pred EEEcCCEEEEEEEEeeCCCCCCCCCC------------------------------------------CCeeEEEEEEcC
Confidence 45678999999999999998776654 8999999993
Q ss_pred --CeeeeeeccccCCCCCeeeeEEEEeecCC--CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCC
Q 006430 90 --QATVARTRVLKNSQEPVWNEHFNIPLAHP--LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAP 162 (645)
Q Consensus 90 --~~~~~kT~v~~~t~~P~w~e~f~~~~~~~--~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~ 162 (645)
.....+|++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.++|.++..+. ..+||+|...
T Consensus 49 ~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 49 PKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp TTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 34557999999999999999999998754 346999999999987 899999999999998655 7899999643
No 24
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.64 E-value=8e-16 Score=142.59 Aligned_cols=104 Identities=33% Similarity=0.537 Sum_probs=91.3
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC--Cee
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--QAT 92 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~--~~~ 92 (645)
..+.|.|+|++|++|+.++..+. +||||++.+. ...
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~l~~~~~~ 69 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGT------------------------------------------SDPYVKVFLLPDKKK 69 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBC------------------------------------------CCEEEEEEEESCCSC
T ss_pred CCCEEEEEEEEecCCCCCCCCCC------------------------------------------cCcEEEEEEECCCCc
Confidence 56789999999999998775554 8999999993 344
Q ss_pred eeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEcc
Q 006430 93 VARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDII 160 (645)
Q Consensus 93 ~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~ 160 (645)
..+|++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.++|.++..+...+.||+|.
T Consensus 70 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 70 KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp CEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred cEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 68999999999999999999998653 367999999999987 899999999999999888899999993
No 25
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.64 E-value=8e-16 Score=144.35 Aligned_cols=135 Identities=16% Similarity=0.246 Sum_probs=106.9
Q ss_pred cchHHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccCccCC
Q 006430 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTP 320 (645)
Q Consensus 241 ~~~f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~~~~~ 320 (645)
+.+++.+.++|++|+++|+|+.|.|.. ..|.++|.+|++|||+||||+ |..++...
T Consensus 13 ~~~~~~~~~~i~~A~~~I~i~~~~~~~-----------------~~i~~aL~~a~~rGV~Vril~-~~~~~~~~------ 68 (155)
T 1byr_A 13 GSARVLVLSAIDSAKTSIRMMAYSFTA-----------------PDIMKALVAAKKRGVDVKIVI-DERGNTGR------ 68 (155)
T ss_dssp THHHHHHHHHHHHCSSEEEEEESSBCC-----------------HHHHHHHHHHHHTTCEEEEEE-ESTTCCSH------
T ss_pred CcHHHHHHHHHHHHhhEEEEEEEEeCC-----------------HHHHHHHHHHHHCCCEEEEEE-eCcccccc------
Confidence 357999999999999999999887621 589999999999999999996 77643210
Q ss_pred CccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecceeeccceEEEeccCCCCCCcceEEEEccccCCCCCCCC
Q 006430 321 GVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDT 400 (645)
Q Consensus 321 ~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~~~vafvGG~ni~~~r~d~ 400 (645)
......+.|.++|+++.... + ..+.|.|++|||++ ++++||+|++...+
T Consensus 69 -----~~~~~~~~L~~~gv~v~~~~--~--------------~~~~H~K~~iiD~~--------~~~iGS~N~~~~~~-- 117 (155)
T 1byr_A 69 -----ASIAAMNYIANSGIPLRTDS--N--------------FPIQHDKVIIVDNV--------TVETGSFNFTKAAE-- 117 (155)
T ss_dssp -----HHHHHHHHHHHTTCCEEEEC--S--------------SSCCCCCEEEETTT--------EEEEESCCBSHHHH--
T ss_pred -----ccHHHHHHHHHCCCeEEEcC--C--------------cccccceEEEECCC--------EEEEECCCCCcccc--
Confidence 02456677888999987421 1 12579999999998 99999999987211
Q ss_pred CCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeCh--HHHHHHHHHHHHHhhhc
Q 006430 401 PEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP--AAYDVLINFEQRWRKAT 460 (645)
Q Consensus 401 ~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gp--av~dl~~~F~~rWn~~~ 460 (645)
..|++..+.++|+ .+.++...|.+.|+.+.
T Consensus 118 ------------------------------~~n~E~~~~i~~~~~l~~~~~~~f~~~w~~~~ 149 (155)
T 1byr_A 118 ------------------------------TKNSENAVVIWNMPKLAESFLEHWQDRWNQGR 149 (155)
T ss_dssp ------------------------------HTSCEEEEEEESCHHHHHHHHHHHHHHHHTCE
T ss_pred ------------------------------ccCcccEEEEcCcHHHHHHHHHHHHHHHHhCC
Confidence 2467999999994 89999999999998754
No 26
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.64 E-value=7.8e-16 Score=143.68 Aligned_cols=105 Identities=16% Similarity=0.317 Sum_probs=90.1
Q ss_pred ceEEEEEEEEeeCCCCCC-CCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----
Q 006430 16 HGDLDLKIIRARRLPNMD-MMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (645)
Q Consensus 16 ~g~L~v~i~~a~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~---- 90 (645)
.+.|.|+|++|++|+.++ ..+. +||||++.+..
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~------------------------------------------~dpyv~v~l~~~~~~ 59 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKR------------------------------------------SNPYVKTYLLPDKSR 59 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTB------------------------------------------CCEEEEEEEETCCSG
T ss_pred CCEEEEEEEEecCCCCcccCCCC------------------------------------------CCeEEEEEEEcCCcc
Confidence 578999999999999876 2333 89999999853
Q ss_pred eeeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCC
Q 006430 91 ATVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAP 162 (645)
Q Consensus 91 ~~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~ 162 (645)
..+.+|++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.|+|.++..+...+.||+|...
T Consensus 60 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 60 QGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp GGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred cCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 2367999999999999999999998774 345999999999987 89999999999999877778899999543
No 27
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=2.1e-15 Score=139.46 Aligned_cols=104 Identities=29% Similarity=0.473 Sum_probs=90.7
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC--Cee
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--QAT 92 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~--~~~ 92 (645)
..+.|.|+|++|++|+.++..+. +||||++.+. ...
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~ 61 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGT------------------------------------------SDPFVKIYLLPDKKH 61 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSC------------------------------------------CCEEEEEEEESCCSS
T ss_pred CCCEEEEEEEEeECCCCCCCCCC------------------------------------------CCcEEEEEEECCCCc
Confidence 46889999999999998776554 8999999994 344
Q ss_pred eeeeccccCCCCCeeeeEEEEeecC----CCCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEcc
Q 006430 93 VARTRVLKNSQEPVWNEHFNIPLAH----PLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDII 160 (645)
Q Consensus 93 ~~kT~v~~~t~~P~w~e~f~~~~~~----~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~ 160 (645)
..||++++++.||+|||+|.|.+.+ ....|.|+|||++.++ +++||++.|++.++..+.....||+|.
T Consensus 62 ~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 134 (141)
T 2d8k_A 62 KLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLK 134 (141)
T ss_dssp EEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCE
T ss_pred cEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECc
Confidence 6799999999999999999998643 2567999999999987 899999999999999888889999994
No 28
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.63 E-value=4.6e-16 Score=146.98 Aligned_cols=104 Identities=25% Similarity=0.414 Sum_probs=90.2
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~---- 90 (645)
..+.|.|+|++|++|++++..+. +||||++.+.+
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~------------------------------------------sDPyVkv~l~~~~~~ 78 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQD------------------------------------------QKVNIRVAVLPCSES 78 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCC------------------------------------------SEEEEEEEEESCSCH
T ss_pred CCCEEEEEEEEccCcCCcccCCC------------------------------------------CCEEEEEEEecCCCC
Confidence 46789999999999998876654 89999999954
Q ss_pred -eeeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeecccccc-CCceeEEEEEcc
Q 006430 91 -ATVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIA-TGELISRWYDII 160 (645)
Q Consensus 91 -~~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~-~~~~~~~w~~l~ 160 (645)
..+.||++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.|+|.++. .+....+||+|+
T Consensus 79 ~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 79 TTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 2368999999999999999999998753 457999999999987 899999999999996 467788999984
No 29
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.63 E-value=2.5e-16 Score=156.89 Aligned_cols=152 Identities=13% Similarity=0.134 Sum_probs=109.6
Q ss_pred cchHHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccCccCC
Q 006430 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTP 320 (645)
Q Consensus 241 ~~~f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~~~~~ 320 (645)
.+.++.|+++|++|+++|+|+.|+|+. ..|.++|++||+|||+||||+ |..++...
T Consensus 57 ~~~~~~ii~~I~~A~~sI~i~~Y~~~~-----------------~~I~~aL~~Aa~RGV~VRii~-D~~~~~~~------ 112 (220)
T 4gel_A 57 LRNVAKIVEQIDRAVYSIDLAIYTFTS-----------------LFLADSIKRALQRGVIIRIIS-DGEMVYSK------ 112 (220)
T ss_dssp HHHHHHHHHHHHTCSSEEEEECSCBCC-----------------HHHHHHHHHHHHHTCEEEEEC-CTTTTTST------
T ss_pred HHHHHHHHHHHHHhhhEEEEEEEEeCC-----------------HHHHHHHHHHHHcCCeEEEEE-echhhhhh------
Confidence 467999999999999999999998842 589999999999999999995 98765431
Q ss_pred CccccChHHHHhhhcCCCceEEeccCCCCCCccc--eee--eeecceeeccceEEEeccCCCCCCcceEEEEccccCCCC
Q 006430 321 GVMATHDEETKKFFKHSSVNCVLAPRYASSKLSY--FKQ--QIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDG 396 (645)
Q Consensus 321 ~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~--~~~--~~~~~~~r~HqK~vVID~~~~~~~~~~vafvGG~ni~~~ 396 (645)
......+..+++.+...........++ .+. ...+.+.++|+|++|+|++ ++++||+|++..
T Consensus 113 -------~~~~~~~~~~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~~--------~v~~GS~N~t~~ 177 (220)
T 4gel_A 113 -------GSQISMLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYS--------IVISGSVNWTAL 177 (220)
T ss_dssp -------TCHHHHHHHTTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCCC--------EEEEESCCBSHH
T ss_pred -------HHHHHHHHhcCCcEEeecccccccceeEEEcchhcccccccccceeccccccc--------eEEecCcccccc
Confidence 122334455666665321111000011 000 0123456889999999998 999999998762
Q ss_pred CCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeChHHHHHHHHHHHHHhhhccc
Q 006430 397 RYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKL 462 (645)
Q Consensus 397 r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gpav~dl~~~F~~rWn~~~~~ 462 (645)
.. ...|.|+.+...|++|.+++..|.+.|+.....
T Consensus 178 s~-------------------------------~~N~E~~~vi~~~~~a~~~~~~F~~~W~~~~~~ 212 (220)
T 4gel_A 178 GL-------------------------------GGNWENCIITADDKLTATFQAEFQRMWRAFAKT 212 (220)
T ss_dssp HH-------------------------------HTSBEEEEEECCHHHHHHHHHHHHHHHHHSEEC
T ss_pred cc-------------------------------ccCceEEEEEECHHHHHHHHHHHHHHHHhccCC
Confidence 21 236889999999999999999999999986543
No 30
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.61 E-value=2.9e-15 Score=136.08 Aligned_cols=101 Identities=26% Similarity=0.444 Sum_probs=83.4
Q ss_pred ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC----Ce
Q 006430 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP----QA 91 (645)
Q Consensus 16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~----~~ 91 (645)
.+.|.|+|++|++|+.++..+. +||||++.+. ..
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~------------------------------------------~dpyv~v~~~~~~~~~ 54 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRP------------------------------------------RNPYVKIYFLPDRSDK 54 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCC------------------------------------------BCEEEEEEEESSCSGG
T ss_pred CCEEEEEEEEeeCCCCCCCCCC------------------------------------------CCCEEEEEEecCCCCC
Confidence 5789999999999998776654 8999999982 24
Q ss_pred eeeeeccccCCCCCeeeeEEEEeecC----CCCeEEEEEEEcCCCC---CeeeeeEeeccccccCCceeEEEEEc
Q 006430 92 TVARTRVLKNSQEPVWNEHFNIPLAH----PLSNLEIQVKDDDVFG---AQIIGTAAIPAHTIATGELISRWYDI 159 (645)
Q Consensus 92 ~~~kT~v~~~t~~P~w~e~f~~~~~~----~~~~l~i~v~d~~~~~---~~~iG~~~i~l~~l~~~~~~~~w~~l 159 (645)
...+|++++++.||+|||+|.|.+.+ ....|.|+|||++.++ +++||++.+++.++.... ..+||+|
T Consensus 55 ~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 55 NKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp GEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred cceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 56799999999999999999999533 2467999999999886 899999999999988554 7899998
No 31
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.61 E-value=4e-15 Score=137.14 Aligned_cols=105 Identities=25% Similarity=0.421 Sum_probs=88.7
Q ss_pred ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC----Ce
Q 006430 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP----QA 91 (645)
Q Consensus 16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~----~~ 91 (645)
.+.|.|+|++|++|+.++..+. +||||++.+. ..
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~~ 57 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRP------------------------------------------RNPYVKIYFLPDRSDK 57 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCC------------------------------------------CCEEEECCCSSCCSSS
T ss_pred CCEEEEEEEEccCCCCcCCCCC------------------------------------------CCCEEEEEEecCCCCC
Confidence 5789999999999998876654 8999999983 24
Q ss_pred eeeeeccccCCCCCeeeeEEEEeecC-C---CCeEEEEEEEcCCCC---CeeeeeEeeccccccCCceeEEEEEccCCC
Q 006430 92 TVARTRVLKNSQEPVWNEHFNIPLAH-P---LSNLEIQVKDDDVFG---AQIIGTAAIPAHTIATGELISRWYDIIAPS 163 (645)
Q Consensus 92 ~~~kT~v~~~t~~P~w~e~f~~~~~~-~---~~~l~i~v~d~~~~~---~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~ 163 (645)
...||++++++.||+|||+|.|.+.+ . ...|.|+|||++.++ +++||++.|+|.++.... ..+||+|....
T Consensus 58 ~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~ 135 (141)
T 1v27_A 58 NKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHD 135 (141)
T ss_dssp SCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCS
T ss_pred cceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcccc
Confidence 55799999999999999999999533 2 367999999999886 799999999999987554 78999996443
No 32
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.60 E-value=5.3e-15 Score=138.96 Aligned_cols=107 Identities=22% Similarity=0.388 Sum_probs=89.9
Q ss_pred EEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC--
Q 006430 13 IYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ-- 90 (645)
Q Consensus 13 ~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~-- 90 (645)
..-.+.|.|+|++|++|+.++ .+. +||||++.+..
T Consensus 23 ~~~~~~L~V~v~~a~~L~~~d-~g~------------------------------------------~Dpyv~v~l~~~~ 59 (153)
T 3fbk_A 23 DAQDRVLLLHIIEGKGLISKQ-PGT------------------------------------------CDPYVKISLIPED 59 (153)
T ss_dssp EESSSEEEEEEEEEESCCCCS-SSC------------------------------------------CCEEEEEEEESCS
T ss_pred ECCCCEEEEEEEEeeCCCCCC-CCC------------------------------------------CCEEEEEEEEcCC
Confidence 456788999999999999876 343 89999999832
Q ss_pred --eeeeeeccccCCCCCeeeeEEEEeec--CCCCeEEEEEEEcCCCC--CeeeeeEeeccccccC-CceeEEEEEccCC
Q 006430 91 --ATVARTRVLKNSQEPVWNEHFNIPLA--HPLSNLEIQVKDDDVFG--AQIIGTAAIPAHTIAT-GELISRWYDIIAP 162 (645)
Q Consensus 91 --~~~~kT~v~~~t~~P~w~e~f~~~~~--~~~~~l~i~v~d~~~~~--~~~iG~~~i~l~~l~~-~~~~~~w~~l~~~ 162 (645)
....+|++++++.||+|||+|.|.+. .....|.|+|||.+.++ +++||++.++|.++.. +....+||+|...
T Consensus 60 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 60 SRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp CCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred CCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 34579999999999999999999984 34456999999999874 8999999999999984 7788999999654
No 33
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.60 E-value=4.5e-15 Score=137.08 Aligned_cols=82 Identities=21% Similarity=0.344 Sum_probs=72.4
Q ss_pred CCcEEEEEEC---CeeeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCce
Q 006430 80 SDPYVTVVVP---QATVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGEL 152 (645)
Q Consensus 80 ~dpyv~v~l~---~~~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~ 152 (645)
+||||++.+. .....||++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.++|.++..+..
T Consensus 44 sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~ 123 (138)
T 1wfm_A 44 CDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLG 123 (138)
T ss_dssp CCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTT
T ss_pred cceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCccc
Confidence 8999999983 34468999999999999999999998764 457999999999987 8999999999999987777
Q ss_pred eEEEEEccC
Q 006430 153 ISRWYDIIA 161 (645)
Q Consensus 153 ~~~w~~l~~ 161 (645)
.+.|++|..
T Consensus 124 ~~~W~~L~~ 132 (138)
T 1wfm_A 124 AAQWGELKT 132 (138)
T ss_dssp CCEEEECCC
T ss_pred ccceeeCcC
Confidence 889999954
No 34
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.59 E-value=6.8e-15 Score=136.12 Aligned_cols=103 Identities=29% Similarity=0.480 Sum_probs=89.6
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~---- 90 (645)
..+.|.|+|++|++|+.++..+. +||||++.+.+
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~ 64 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGL------------------------------------------ADPYVKLHLLPGASK 64 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSC------------------------------------------CCEEEEEEEESCCSG
T ss_pred CCCEEEEEEEEecCCCCCCCCCC------------------------------------------CCCEEEEEEEcCCCC
Confidence 56889999999999998776554 89999999964
Q ss_pred eeeeeeccccCCCCCeeeeEEEEe-ecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEc
Q 006430 91 ATVARTRVLKNSQEPVWNEHFNIP-LAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDI 159 (645)
Q Consensus 91 ~~~~kT~v~~~t~~P~w~e~f~~~-~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l 159 (645)
....||++++++.||+|||+|.|. +... ...|.|+|||++.++ +++||++.|++.++..+....-|++|
T Consensus 65 ~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L 138 (142)
T 2chd_A 65 SNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICL 138 (142)
T ss_dssp GGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEEC
T ss_pred cceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEec
Confidence 356899999999999999999998 5432 367999999999987 89999999999999988877888888
No 35
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=7.1e-15 Score=135.97 Aligned_cols=104 Identities=22% Similarity=0.418 Sum_probs=87.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----e
Q 006430 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ----A 91 (645)
Q Consensus 16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~----~ 91 (645)
.+.|.|+|++|++|+.++..+ +||||++.+.. .
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g-------------------------------------------~dpyv~v~l~~~~~~~ 59 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG-------------------------------------------SDPYVRMYLLPDKRRS 59 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC-------------------------------------------CCEEEEEEEESCCCSS
T ss_pred CCEEEEEEEEeECCCCCCCCC-------------------------------------------CCeeEEEEEEcCCCCC
Confidence 678999999999999765432 79999999842 2
Q ss_pred eeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC---CeeeeeEeeccccccCCceeEEEEEccCC
Q 006430 92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG---AQIIGTAAIPAHTIATGELISRWYDIIAP 162 (645)
Q Consensus 92 ~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~---~~~iG~~~i~l~~l~~~~~~~~w~~l~~~ 162 (645)
...+|++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.|+|.++..+....+||+|...
T Consensus 60 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 60 GRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp SCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred CcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 457999999999999999999998652 357999999999875 36999999999999877778899999543
No 36
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.57 E-value=1.4e-14 Score=133.44 Aligned_cols=105 Identities=29% Similarity=0.406 Sum_probs=87.6
Q ss_pred EceEEEEEEEEeeCCCCCCCC-chhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC--e
Q 006430 15 LHGDLDLKIIRARRLPNMDMM-SEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ--A 91 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~--~ 91 (645)
..+.|.|+|++|++|+.++.. +. +||||++.+.+ .
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~------------------------------------------~dpyv~v~~~~~~~ 57 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMT------------------------------------------SDPYIKMTILPEKK 57 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTB------------------------------------------CEEEEEEEEETTTC
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCC------------------------------------------CCCEEEEEEecCCC
Confidence 567899999999999987764 43 89999999953 4
Q ss_pred eeeeeccccCCCCCeeeeEEEEe-ecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCcee-EEEEEccC
Q 006430 92 TVARTRVLKNSQEPVWNEHFNIP-LAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELI-SRWYDIIA 161 (645)
Q Consensus 92 ~~~kT~v~~~t~~P~w~e~f~~~-~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~-~~w~~l~~ 161 (645)
...||++++++.||+|||+|.|. +... ...|.|+|||++.++ +++||++.|+|.++..+... .-|++|..
T Consensus 58 ~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 58 HKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp SEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred ceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 56899999999999999999996 6543 357999999999987 89999999999999865444 55788843
No 37
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.57 E-value=1.3e-14 Score=133.16 Aligned_cols=105 Identities=28% Similarity=0.439 Sum_probs=85.6
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~---- 90 (645)
..+.|.|+|++|++|+.++..+. +||||++.+.+
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~ 51 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDIGGT------------------------------------------SDPYVKVWLMYKDKR 51 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBTTTB------------------------------------------CCEEEEEEEEETTEE
T ss_pred CCCeEEEEEEEeeCCCCcCCCCC------------------------------------------cCeEEEEEEEeCCCc
Confidence 45889999999999998776554 89999999853
Q ss_pred eeeeeeccccCCCCCeeeeEEEEeecCCC---CeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCCC
Q 006430 91 ATVARTRVLKNSQEPVWNEHFNIPLAHPL---SNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPS 163 (645)
Q Consensus 91 ~~~~kT~v~~~t~~P~w~e~f~~~~~~~~---~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~ 163 (645)
....+|++++++.||+|||+|.|.+.... ..|.|+|||.+.++ +++||++.|++.++. ...++|++|+...
T Consensus 52 ~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~--~~~~~W~~l~~~~ 126 (138)
T 3n5a_A 52 VEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP--GEVKHWKDMIARP 126 (138)
T ss_dssp EEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH--HHHHHHHHHHHST
T ss_pred cceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccCC--hHHHHHHHHHhCC
Confidence 34679999999999999999999987654 56999999999987 899999999998753 2234555554433
No 38
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.56 E-value=1.7e-14 Score=136.18 Aligned_cols=104 Identities=27% Similarity=0.445 Sum_probs=87.9
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~---- 90 (645)
..+.|.|+|++|++|+.++..+. +||||++.+..
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~l~~~~~~ 60 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGL------------------------------------------SDPYVKIHLMQNGKR 60 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEEETTEE
T ss_pred CCCEEEEEEEEeeCCCCccCCCC------------------------------------------CCeEEEEEEEeCCce
Confidence 46799999999999998876554 89999999853
Q ss_pred eeeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccc------------cCCceeE
Q 006430 91 ATVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTI------------ATGELIS 154 (645)
Q Consensus 91 ~~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l------------~~~~~~~ 154 (645)
....+|++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||.+.|++..+ ..+....
T Consensus 61 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~ 140 (159)
T 1tjx_A 61 LKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIA 140 (159)
T ss_dssp EEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEE
T ss_pred eceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeee
Confidence 2467999999999999999999998754 356999999999987 89999999999853 2345678
Q ss_pred EEEEcc
Q 006430 155 RWYDII 160 (645)
Q Consensus 155 ~w~~l~ 160 (645)
.||+|.
T Consensus 141 ~W~~L~ 146 (159)
T 1tjx_A 141 QWHTLQ 146 (159)
T ss_dssp EEEECB
T ss_pred eEEECc
Confidence 999994
No 39
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.56 E-value=2.3e-14 Score=136.32 Aligned_cols=91 Identities=29% Similarity=0.405 Sum_probs=79.9
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~---- 90 (645)
..+.|.|+|++|++|+.++..+. +||||++.+.+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------~DPyv~v~l~~~~~~ 72 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGY------------------------------------------SDPFVKLWLKPDMGK 72 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEETC---
T ss_pred CCCEEEEEEEEeECCCCccCCCC------------------------------------------CCcEEEEEEECCCCc
Confidence 46889999999999998776554 89999999965
Q ss_pred eeeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccc
Q 006430 91 ATVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTI 147 (645)
Q Consensus 91 ~~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l 147 (645)
....||++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.|++.++
T Consensus 73 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 73 KAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred cceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccC
Confidence 3568999999999999999999998753 457999999999987 89999999999875
No 40
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.56 E-value=3.6e-15 Score=139.89 Aligned_cols=103 Identities=27% Similarity=0.423 Sum_probs=80.8
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEE--CCe-
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVV--PQA- 91 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l--~~~- 91 (645)
..+.|.|+|++|++|+.++..+. +||||++.+ ++.
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dpyv~v~~~~~~~~ 65 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGL------------------------------------------SDPYVKVNLYHAKKR 65 (153)
T ss_dssp TTTEEEEEEEEEESCC------C------------------------------------------CCEEEEEEEEETTEE
T ss_pred CCCEEEEEEEEeECCCCcCCCCC------------------------------------------CCeEEEEEEEeCCeE
Confidence 46789999999999998776554 899999998 443
Q ss_pred -eeeeeccccCCCCCeeeeEEEEeecCCC---CeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccC
Q 006430 92 -TVARTRVLKNSQEPVWNEHFNIPLAHPL---SNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIA 161 (645)
Q Consensus 92 -~~~kT~v~~~t~~P~w~e~f~~~~~~~~---~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~ 161 (645)
...||++++++.||+|||+|.|.+.... ..|.|+|||++.++ +++||++.|++.+ .+....+|++|+.
T Consensus 66 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~ 138 (153)
T 1w15_A 66 ISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICD 138 (153)
T ss_dssp EEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHH
T ss_pred eceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHh
Confidence 3579999999999999999999987652 56899999999987 8999999999987 2334455666644
No 41
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=5.9e-15 Score=137.46 Aligned_cols=112 Identities=26% Similarity=0.468 Sum_probs=89.6
Q ss_pred ceEEEEEEEEeeCCCCC-CCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC--ee
Q 006430 16 HGDLDLKIIRARRLPNM-DMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ--AT 92 (645)
Q Consensus 16 ~g~L~v~i~~a~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~--~~ 92 (645)
.+.|.|+|++|++|+.+ +..+. +...+.+||||++.+.. ..
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~------------------------------------~~~~~~~dpyv~v~l~~~~~~ 68 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGS------------------------------------RQDMAHSNPYVKICLLPDQKN 68 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCS------------------------------------SCTTCCCCCEEEEEEETCCSS
T ss_pred CCEEEEEEEEEeCCCCccccccc------------------------------------cccCCCCCcEEEEEEEeCCCc
Confidence 67899999999999973 43321 00112389999999853 34
Q ss_pred eeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCCCC
Q 006430 93 VARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSG 164 (645)
Q Consensus 93 ~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~ 164 (645)
..+|++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.|+|.++..+.....|++| .+.+
T Consensus 69 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L-~~~~ 143 (147)
T 2enp_A 69 SKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKAL-IPSG 143 (147)
T ss_dssp CEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECC-BCCC
T ss_pred ceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEe-ecCC
Confidence 57999999999999999999998753 357999999999987 89999999999999877667788888 4443
No 42
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.53 E-value=4.9e-14 Score=146.70 Aligned_cols=125 Identities=25% Similarity=0.391 Sum_probs=100.1
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC--Cee
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--QAT 92 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~--~~~ 92 (645)
-.+.|.|+|++|++|+.++..+. +||||++.+. +..
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~------------------------------------------~dPyv~v~l~~~~~~ 55 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGF------------------------------------------SDPYVKIYLLPDRKK 55 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSC------------------------------------------CCEEEEEECTTSTTS
T ss_pred CCCEEEEEEEEeECCCCcCCCCC------------------------------------------cCeEEEEEEEcCCCe
Confidence 36889999999999998876654 8999999993 345
Q ss_pred eeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeec-ccccc-CCceeEEEEEccCCCCCC
Q 006430 93 VARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIP-AHTIA-TGELISRWYDIIAPSGSP 166 (645)
Q Consensus 93 ~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~-l~~l~-~~~~~~~w~~l~~~~~~~ 166 (645)
..+|++++++.||+|||+|.|.+... ...|.|+|||.+.++ +++||++.++ +.++. .+.....|++|.... +.
T Consensus 56 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~-~~ 134 (296)
T 1dqv_A 56 KFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGG-SE 134 (296)
T ss_dssp CEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCS-SC
T ss_pred eEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeecccccc-cc
Confidence 57999999999999999999998653 347999999999987 8999999996 44443 234557899995433 23
Q ss_pred CCCCceEEEEEEEEeC
Q 006430 167 PKPGASIQLELKFTPC 182 (645)
Q Consensus 167 ~~~~g~l~l~l~f~p~ 182 (645)
....|+|++.++|.|.
T Consensus 135 ~~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 135 KADLGELNFSLCYLPT 150 (296)
T ss_dssp CSCCCEEEEEEEEETT
T ss_pred ccccceEEEEEEeccc
Confidence 3456999999999763
No 43
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.50 E-value=1.4e-13 Score=126.30 Aligned_cols=102 Identities=21% Similarity=0.280 Sum_probs=89.8
Q ss_pred CCcEEEEEECCeeeeeecccc-CCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeE
Q 006430 80 SDPYVTVVVPQATVARTRVLK-NSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELIS 154 (645)
Q Consensus 80 ~dpyv~v~l~~~~~~kT~v~~-~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~ 154 (645)
+|||+++.+-+.+ .||++++ ++.||+|||.|.|++..+ .+.|.|.|+|++.+. +.+||++.++|.++..+....
T Consensus 37 ~Dp~akv~FRg~k-~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~ 115 (144)
T 3l9b_A 37 ADRIAKVTFRGQS-FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVE 115 (144)
T ss_dssp EEEEEEEEETTEE-EECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHHSEEE
T ss_pred CCCeEEEEEeccc-eeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCCEEEEEEEEhHHhccCCeEE
Confidence 8999999997766 6999998 699999999999998864 566899999999987 999999999999999777777
Q ss_pred EEEEccCCCCCCCCCCceEEEEEEEEeCCC
Q 006430 155 RWYDIIAPSGSPPKPGASIQLELKFTPCDK 184 (645)
Q Consensus 155 ~w~~l~~~~~~~~~~~g~l~l~l~f~p~~~ 184 (645)
-+-+|++.++++.. ++|.|+|+|.|.+.
T Consensus 116 l~~~LvD~n~~~~~--a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 116 VSDTLIDDNNAIIK--TSLSMEVRYQAADG 143 (144)
T ss_dssp EEEEEECTTSCEEE--EEEEEEEEEEETTC
T ss_pred EeecccCCCCCccc--cEEEEEEEecCCCC
Confidence 88899888887654 89999999999643
No 44
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.48 E-value=2.7e-13 Score=124.30 Aligned_cols=96 Identities=21% Similarity=0.381 Sum_probs=68.9
Q ss_pred CCcEEEEEECCeeeeeecccc-CCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccCCc--eeEE
Q 006430 80 SDPYVTVVVPQATVARTRVLK-NSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGE--LISR 155 (645)
Q Consensus 80 ~dpyv~v~l~~~~~~kT~v~~-~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~--~~~~ 155 (645)
+||||++.. . . .||++++ ++.||+|||+|.|.+......|.|+|||++ +. |++||++.|+|.++.... ....
T Consensus 23 ~DPYv~v~~-~-~-~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~~~ 98 (131)
T 2cjt_A 23 FNTYVTLKV-Q-N-VKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGE 98 (131)
T ss_dssp CEEEEEEEE-T-T-EEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEEEEEEEEEGGGSCBCSSCCCCE
T ss_pred cCeEEEEEe-c-C-EEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCeEEEEEEEHHHhhhcCCCCccc
Confidence 899999992 2 2 3565554 699999999999999987788999999999 65 899999999999986432 1224
Q ss_pred EEEccC----CCC----CCCCCCceEEEEEEE
Q 006430 156 WYDIIA----PSG----SPPKPGASIQLELKF 179 (645)
Q Consensus 156 w~~l~~----~~~----~~~~~~g~l~l~l~f 179 (645)
|.++.- ++| +-....+.+.+.++|
T Consensus 99 ~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 99 WLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EEECBC----------CCSCCCCCEEEEEEEE
T ss_pred cEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 655531 222 222224557777776
No 45
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.44 E-value=5.4e-13 Score=148.87 Aligned_cols=117 Identities=21% Similarity=0.358 Sum_probs=99.0
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCeeee
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVA 94 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~~~~ 94 (645)
-.|.|.|+|++|++|++++..+. +||||++.+++.. .
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~------------------------------------------sdpyv~v~~~~~~-~ 421 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGK------------------------------------------SNPYCEISMGSQS-Y 421 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEETTEE-E
T ss_pred CCceEEEEeceeecCCCCCCCCC------------------------------------------CCeEEEEEECCee-c
Confidence 45789999999999998876664 9999999998755 7
Q ss_pred eeccccCCCCCeeeeEEEEeecCCC-CeEEEEEEEcCCCC-CeeeeeEeeccccccCCce----eEEEEEccCCCCCCCC
Q 006430 95 RTRVLKNSQEPVWNEHFNIPLAHPL-SNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGEL----ISRWYDIIAPSGSPPK 168 (645)
Q Consensus 95 kT~v~~~t~~P~w~e~f~~~~~~~~-~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~----~~~w~~l~~~~~~~~~ 168 (645)
+|++++++.||+|||+|.|.+.... ..|.|+|||++.++ +++||++.+++.++..+.. ...|+++...
T Consensus 422 ~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------ 495 (510)
T 3jzy_A 422 TTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------ 495 (510)
T ss_dssp ECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------
T ss_pred cCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC------
Confidence 9999999999999999999987654 56899999999988 8999999999999986543 6789998422
Q ss_pred CCceEEEEEEEE
Q 006430 169 PGASIQLELKFT 180 (645)
Q Consensus 169 ~~g~l~l~l~f~ 180 (645)
..|+|+|++.+.
T Consensus 496 ~~G~i~l~~~l~ 507 (510)
T 3jzy_A 496 PTGEVWVRFDLQ 507 (510)
T ss_dssp SSCEEEEEEEEE
T ss_pred CCceEEEEEEEE
Confidence 459998887754
No 46
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.42 E-value=1.1e-12 Score=125.42 Aligned_cols=98 Identities=20% Similarity=0.309 Sum_probs=70.2
Q ss_pred CCcEEEEEECCeeeeeecccc-CCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccCCc------
Q 006430 80 SDPYVTVVVPQATVARTRVLK-NSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGE------ 151 (645)
Q Consensus 80 ~dpyv~v~l~~~~~~kT~v~~-~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~------ 151 (645)
+||||++.. + ..||++++ ++.||+|||+|.|.+......|.|+|||++ +. |++||++.|+|.++....
T Consensus 32 ~DPYV~v~~-~--~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~L~~l~~~~~~g~~~ 107 (167)
T 2cjs_A 32 FNTYVTLKV-Q--NVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGE 107 (167)
T ss_dssp CEEEEEEEE-T--TEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCEEEEEEEEEGGGSCBCSSCCCCE
T ss_pred CCeEEEEEe-c--ceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCceEEEEEEEHHHhcccCcCCccc
Confidence 899999992 2 24676665 599999999999999988788999999999 65 999999999999986432
Q ss_pred eeEEEEEccCCCCC----CCCCCceEEEEEEEEe
Q 006430 152 LISRWYDIIAPSGS----PPKPGASIQLELKFTP 181 (645)
Q Consensus 152 ~~~~w~~l~~~~~~----~~~~~g~l~l~l~f~p 181 (645)
-...|+.+..+.|+ .....+.+++.++|..
T Consensus 108 ~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~ 141 (167)
T 2cjs_A 108 WLTLDSQAIMADSEICGTKDPTFHRILLDAHFEL 141 (167)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEC
T ss_pred ceeeeeeeEcCCCCCCceEccccceEEEEEEeec
Confidence 12234444323322 1112355677777644
No 47
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.41 E-value=1.5e-12 Score=145.72 Aligned_cols=107 Identities=21% Similarity=0.316 Sum_probs=90.6
Q ss_pred ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCeeeee
Q 006430 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVAR 95 (645)
Q Consensus 16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~~~~k 95 (645)
.+.|.|+|++|++|+. |..+. +||||+|.+++.. .|
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~------------------------------------------sDPYV~v~l~~~~-~k 428 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTA------------------------------------------TDAYLKVFFGGQE-FR 428 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSC------------------------------------------CCEEEEEEETTEE-EE
T ss_pred ccEEEEEEEEccCCCc-ccCCC------------------------------------------cCeEEEEEECCEe-ee
Confidence 4689999999999998 76665 9999999999865 89
Q ss_pred eccccCCCCCeeeeEEEEeec--CCCCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCCCCCCCCCCce
Q 006430 96 TRVLKNSQEPVWNEHFNIPLA--HPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGAS 172 (645)
Q Consensus 96 T~v~~~t~~P~w~e~f~~~~~--~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~~~~~~~g~ 172 (645)
|+|+++++||+|||+|.|.+. .....|+|+|||+|.++ |++||++.++|. .| ..+.|++| + .|+
T Consensus 429 Tkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~---~g-~~~~~~~l-~--------~G~ 495 (540)
T 3nsj_A 429 TGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPH---SG-FHEVTCEL-N--------HGR 495 (540)
T ss_dssp CCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCEEEEEEEECCC---SE-EEEEEEEC-S--------SSE
T ss_pred eeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCCEEEEEEEEee---CC-cEEEEEEc-C--------CeE
Confidence 999999999999999999854 35677999999999987 799999999987 24 46789987 2 288
Q ss_pred EEEEEEE
Q 006430 173 IQLELKF 179 (645)
Q Consensus 173 l~l~l~f 179 (645)
|++++..
T Consensus 496 l~~~~~~ 502 (540)
T 3nsj_A 496 VKFSYHA 502 (540)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8777663
No 48
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.39 E-value=4e-14 Score=157.30 Aligned_cols=128 Identities=24% Similarity=0.413 Sum_probs=26.2
Q ss_pred eEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCe
Q 006430 12 VIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQA 91 (645)
Q Consensus 12 ~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~ 91 (645)
.....+.|.|+|++|++|+++ .||||++.+++.
T Consensus 6 ~~r~~~~L~V~VieAk~L~~~-----------------------------------------------ddpYv~v~l~~~ 38 (483)
T 3bxj_A 6 SRRVDNVLKLWIIEARELPPK-----------------------------------------------KRYYCELCLDDM 38 (483)
T ss_dssp EEEEEECC------------------------------------------------------------------------
T ss_pred cceeccEEEEEEEEcCCcCCC-----------------------------------------------CCCeEEEEECCe
Confidence 345678899999999999852 379999999887
Q ss_pred eeeeeccccCC---CCCeeeeEEEEeecCCCCeEEEEEEEc-C---CCC-CeeeeeEeeccccccCCceeEEEEEccCCC
Q 006430 92 TVARTRVLKNS---QEPVWNEHFNIPLAHPLSNLEIQVKDD-D---VFG-AQIIGTAAIPAHTIATGELISRWYDIIAPS 163 (645)
Q Consensus 92 ~~~kT~v~~~t---~~P~w~e~f~~~~~~~~~~l~i~v~d~-~---~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~ 163 (645)
...||++++++ .||+|||+|.|.+.+....|.|+|||+ + ..+ +++||.+.|++.++..+...++||+|.++.
T Consensus 39 ~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~ 118 (483)
T 3bxj_A 39 LYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPT 118 (483)
T ss_dssp --------------------CCEECC------------------------------------------CCEECC------
T ss_pred EEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCC
Confidence 66899999999 999999999999766667899999994 4 244 899999999999999888889999996554
Q ss_pred C---------------------CCCCCCceEEEEEEEEeCCCCC
Q 006430 164 G---------------------SPPKPGASIQLELKFTPCDKNP 186 (645)
Q Consensus 164 ~---------------------~~~~~~g~l~l~l~f~p~~~~~ 186 (645)
+ +..+..|+|+|+++|.+....|
T Consensus 119 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~vlP 162 (483)
T 3bxj_A 119 GSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMSILP 162 (483)
T ss_dssp --------------------------------CEEEEEECCBCC
T ss_pred CccccccccccccccccccccccCCCCCceEEEEEEeeeeeecc
Confidence 2 1223569999999999865444
No 49
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.39 E-value=1.7e-12 Score=148.25 Aligned_cols=122 Identities=23% Similarity=0.423 Sum_probs=100.2
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~---- 90 (645)
..+.|.|+|++|++|+.++... .+.+||||+|.+.+
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~----------------------------------------~~~~DPYV~V~l~g~~~d 534 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNK----------------------------------------NSIVDPKVIVEIHGVGRD 534 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCS----------------------------------------SSCCCEEEEEEEESSGGG
T ss_pred cceEEEEEEEEcCCCCcccccc----------------------------------------cCCCCcEEEEEEecCCCC
Confidence 5678999999999999765310 01389999999944
Q ss_pred eeeeeeccccCC-CCCeeeeEEEEeecCCC-CeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCCCCCCC
Q 006430 91 ATVARTRVLKNS-QEPVWNEHFNIPLAHPL-SNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGSPP 167 (645)
Q Consensus 91 ~~~~kT~v~~~t-~~P~w~e~f~~~~~~~~-~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~~~~ 167 (645)
..+.||++++++ .||+|||+|.|.+..+. ..|.|+|||++.++ +++||++.|||..+..|. .|++|.+..|++.
T Consensus 535 ~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~ 611 (624)
T 1djx_A 535 TGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQH 611 (624)
T ss_dssp CEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEE
T ss_pred cceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCC
Confidence 355799999997 99999999999988764 56899999999986 999999999999998763 6999988777643
Q ss_pred CCCceEEEEEEEE
Q 006430 168 KPGASIQLELKFT 180 (645)
Q Consensus 168 ~~~g~l~l~l~f~ 180 (645)
..++|.+++.|.
T Consensus 612 -~~~~L~v~i~~~ 623 (624)
T 1djx_A 612 -PSATLFVKISIQ 623 (624)
T ss_dssp -EEEEEEEEEEEE
T ss_pred -CceEEEEEEEEE
Confidence 358888988875
No 50
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.35 E-value=4.1e-12 Score=130.92 Aligned_cols=103 Identities=26% Similarity=0.444 Sum_probs=86.4
Q ss_pred ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC--C--e
Q 006430 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--Q--A 91 (645)
Q Consensus 16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~--~--~ 91 (645)
.+.|.|.|++|++|+.++..+. +||||++.+. + .
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~------------------------------------------~dpyv~v~~~~~~~~~ 186 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGL------------------------------------------SDPYVKIHLMQNGKRL 186 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEEETTEEE
T ss_pred CCceEEEEEEeECCCCcCCCCC------------------------------------------cCeEEEEEEEeCCcEe
Confidence 5789999999999998876654 8999999984 2 2
Q ss_pred eeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeecccccc------------CCceeEE
Q 006430 92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIA------------TGELISR 155 (645)
Q Consensus 92 ~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~------------~~~~~~~ 155 (645)
.+.+|++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.|++..+. .+....+
T Consensus 187 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~ 266 (284)
T 2r83_A 187 KKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQ 266 (284)
T ss_dssp EEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEE
T ss_pred eeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchhe
Confidence 467999999999999999999998765 346899999999987 899999999997632 3456678
Q ss_pred EEEcc
Q 006430 156 WYDII 160 (645)
Q Consensus 156 w~~l~ 160 (645)
|++|.
T Consensus 267 W~~L~ 271 (284)
T 2r83_A 267 WHTLQ 271 (284)
T ss_dssp EEECB
T ss_pred eeecC
Confidence 99984
No 51
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.33 E-value=3.1e-12 Score=147.49 Aligned_cols=103 Identities=27% Similarity=0.469 Sum_probs=90.9
Q ss_pred EceEEEEEEEEeeCCCC---CCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC-
Q 006430 15 LHGDLDLKIIRARRLPN---MDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ- 90 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~- 90 (645)
..+.|.|+|++|++|+. ++..+. +||||++.+.+
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~------------------------------------------sDPYV~V~l~~~ 53 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDT------------------------------------------PDPYVELFISTT 53 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCC------------------------------------------CCEEEEEECTTS
T ss_pred CccEEEEEEEEEECCCCccccCCCCC------------------------------------------cCeEEEEEEecC
Confidence 35799999999999987 554443 89999999974
Q ss_pred -eeeeeeccccCCCCCeeeeEEEEeecC-CCCeEEEEEEEcCCCCCeeeeeEeeccccccCCceeEEEEEc
Q 006430 91 -ATVARTRVLKNSQEPVWNEHFNIPLAH-PLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDI 159 (645)
Q Consensus 91 -~~~~kT~v~~~t~~P~w~e~f~~~~~~-~~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~l 159 (645)
..+.||+|++++.||+|||+|.|.+.. ....|.|+|||++.+++++||++.|+|.++..+...+.|++|
T Consensus 54 ~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L 124 (749)
T 1cjy_A 54 PDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIF 124 (749)
T ss_dssp TTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECCSSSCEEEEEECCBSTTSCTTCCCCEEEEE
T ss_pred CCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHcCCCCceEEEEec
Confidence 355799999999999999999999987 456789999999998899999999999999988888999999
No 52
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.26 E-value=2e-12 Score=134.48 Aligned_cols=106 Identities=28% Similarity=0.437 Sum_probs=85.7
Q ss_pred ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC--C--e
Q 006430 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--Q--A 91 (645)
Q Consensus 16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~--~--~ 91 (645)
.|.|.|.|++|++|+.++..+. +||||++.+. + .
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~g~------------------------------------------~Dpyv~v~l~~~~~~~ 188 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLTGF------------------------------------------SDPYVKASLISEGRRL 188 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSSSC------------------------------------------CCEEEEECCCTTCCTT
T ss_pred cceeEEEEEEeecCCccCCCCC------------------------------------------CCcEEEEEEEeCCcCc
Confidence 5889999999999998876654 8999999985 2 3
Q ss_pred eeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCCCC
Q 006430 92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSG 164 (645)
Q Consensus 92 ~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~ 164 (645)
.+.||++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||.+.|++..+.. ...++|+.|+...+
T Consensus 189 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~-~~~~~W~~~~~~~~ 264 (296)
T 1dqv_A 189 KKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP-HGREHWAEMLANPR 264 (296)
T ss_dssp SCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH-HHHHHHHTSSSSSS
T ss_pred cceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCc-hhHHHHHHHHhCCC
Confidence 457999999999999999999998765 346899999999997 8999999999987642 12345555554333
No 53
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.09 E-value=3.7e-10 Score=130.51 Aligned_cols=108 Identities=22% Similarity=0.394 Sum_probs=92.3
Q ss_pred eEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC--
Q 006430 12 VIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP-- 89 (645)
Q Consensus 12 ~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~-- 89 (645)
..+..+.|.|+|++|++|++++..+. +||||++.+.
T Consensus 167 ~~~~~~~L~V~v~~a~~L~~~d~~g~------------------------------------------sDPyvkv~l~p~ 204 (674)
T 3pfq_A 167 AHIDREVLIVVVRDAKNLVPMDPNGL------------------------------------------SDPYVKLKLIPD 204 (674)
T ss_dssp EEECSSEEEEEEEEEESCCCCSTTSS------------------------------------------CCEEEEEEEESC
T ss_pred ceeccceeeeeeecccccCCCCcccc------------------------------------------cCcccccccccC
Confidence 35567899999999999999887665 9999999982
Q ss_pred --CeeeeeeccccCCCCCeeeeEEEEeecCC--CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCC
Q 006430 90 --QATVARTRVLKNSQEPVWNEHFNIPLAHP--LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAP 162 (645)
Q Consensus 90 --~~~~~kT~v~~~t~~P~w~e~f~~~~~~~--~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~ 162 (645)
...+.+|++++++.||+|||+|.|.+... ...|.|+|||++.++ +++||++.+++.++... ...+|+.|+..
T Consensus 205 ~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~-~~~~w~~Lls~ 281 (674)
T 3pfq_A 205 PKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQ 281 (674)
T ss_dssp SSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHC-CEEEEEECBCT
T ss_pred ccccccccccccccccCCCccceeeeecccCCccceeeeEEeecccccccccccccccchhhhccC-Ccccceeeccc
Confidence 23457999999999999999999998754 356899999999998 99999999999999854 35899999765
No 54
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.95 E-value=1.8e-09 Score=126.53 Aligned_cols=95 Identities=23% Similarity=0.409 Sum_probs=76.4
Q ss_pred CCcEEEEEECC-----eeeeeeccccC-CCCCeeee-EEEEe-ecCC-CCeEEEEEEEcCCCCCeeeeeEeeccccccCC
Q 006430 80 SDPYVTVVVPQ-----ATVARTRVLKN-SQEPVWNE-HFNIP-LAHP-LSNLEIQVKDDDVFGAQIIGTAAIPAHTIATG 150 (645)
Q Consensus 80 ~dpyv~v~l~~-----~~~~kT~v~~~-t~~P~w~e-~f~~~-~~~~-~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~~~ 150 (645)
+||||+|.+.+ ..+.||+|+++ +.||+||| +|.|. +..+ ...|.|+|||++ +++||++.|||..|..|
T Consensus 742 ~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d---ddfiG~~~lpL~~L~~G 818 (885)
T 3ohm_B 742 VGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG---GKFVGHRILPVSAIRSG 818 (885)
T ss_dssp CCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT---TEEEEEEEEETTTCCCE
T ss_pred CCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC---ccEEeeEEEEHHHcCCC
Confidence 89999999854 23479999976 69999999 69998 6543 456899999987 89999999999999876
Q ss_pred ceeEEEEEccCCCCCCCCCCceEEEEEEEEe
Q 006430 151 ELISRWYDIIAPSGSPPKPGASIQLELKFTP 181 (645)
Q Consensus 151 ~~~~~w~~l~~~~~~~~~~~g~l~l~l~f~p 181 (645)
-++++|.+..|.+. ..++|.+++.+..
T Consensus 819 ---yR~vpL~~~~g~~l-~~atLfv~i~~~~ 845 (885)
T 3ohm_B 819 ---YHYVCLRNEANQPL-CLPALLIYTEASD 845 (885)
T ss_dssp ---EEEEEEECTTSCEE-EEEEEEEEEEEEE
T ss_pred ---ceEEEecCCCCCcc-CceEEEEEEEEEe
Confidence 35789987777642 3478888888765
No 55
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.94 E-value=2.6e-09 Score=124.41 Aligned_cols=113 Identities=25% Similarity=0.423 Sum_probs=90.6
Q ss_pred ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----e
Q 006430 16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ----A 91 (645)
Q Consensus 16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~----~ 91 (645)
.+.|.|+|++|++|+.. . +||||+|.+.+ .
T Consensus 649 ~~~L~V~Visaq~L~~~----~------------------------------------------~DPYV~V~l~g~p~d~ 682 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----Q------------------------------------------ISSYVEVEMYGLPTDT 682 (816)
T ss_dssp CEEEEEEEEEEECCCSS----C------------------------------------------CCEEEEEEEESSGGGC
T ss_pred ceEEEEEEEEcccCCCC----C------------------------------------------CCCeEEEEEeCCCccc
Confidence 47899999999999742 1 89999999854 1
Q ss_pred --eeeeeccccC-CCCCeeeeE-EEEe-ecCC-CCeEEEEEEEcCCCCCeeeeeEeeccccccCCceeEEEEEccCCCCC
Q 006430 92 --TVARTRVLKN-SQEPVWNEH-FNIP-LAHP-LSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGS 165 (645)
Q Consensus 92 --~~~kT~v~~~-t~~P~w~e~-f~~~-~~~~-~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~~ 165 (645)
.+.||+++++ +.||+|||+ |.|. +..+ ...|.|+|||++ +++||++.+||..|..| -++++|.+..|+
T Consensus 683 ~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d---ddfiG~~~ipL~~L~~G---yR~vpL~~~~g~ 756 (816)
T 3qr0_A 683 VRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN---GKFIGHRVMPLDGIKPG---YRHVPLRNESNR 756 (816)
T ss_dssp EEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT---SCEEEEEEEESTTCCCE---EEEEEEECTTSC
T ss_pred ccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC---CCeeeEEEEEHHHcCCc---ceEEEEeCCCCC
Confidence 4579999886 699999998 9998 6544 456899999985 78999999999999976 357899887776
Q ss_pred CCCCCceEEEEEEEEe
Q 006430 166 PPKPGASIQLELKFTP 181 (645)
Q Consensus 166 ~~~~~g~l~l~l~f~p 181 (645)
+. ..++|.+++.+..
T Consensus 757 ~~-~~atLfv~i~~~~ 771 (816)
T 3qr0_A 757 PL-GLASVFAHIVAKD 771 (816)
T ss_dssp EE-EEEEEEEEEEEEE
T ss_pred CC-CceEEEEEEEEEe
Confidence 43 2367877777554
No 56
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.93 E-value=2.9e-09 Score=124.49 Aligned_cols=113 Identities=22% Similarity=0.391 Sum_probs=89.4
Q ss_pred EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----
Q 006430 15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---- 90 (645)
Q Consensus 15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~---- 90 (645)
..+.|.|+|++|++|+. +. +||||+|.+.+
T Consensus 676 ~~~~L~V~Visa~~L~~----~~------------------------------------------~DPYV~V~l~g~p~d 709 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RS------------------------------------------VRTYVEVELFGLPGD 709 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SC------------------------------------------CCEEEEEEEECCTTS
T ss_pred eeeeEEEEEEeccccCc----cC------------------------------------------CCcEEEEEEEecCCC
Confidence 35789999999999984 11 89999999842
Q ss_pred -eeeeeec-cccC-CCCCeeee-EEEE-eecCC-CCeEEEEEEEcCCCCCeeeeeEeeccccccCCceeEEEEEccCCCC
Q 006430 91 -ATVARTR-VLKN-SQEPVWNE-HFNI-PLAHP-LSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSG 164 (645)
Q Consensus 91 -~~~~kT~-v~~~-t~~P~w~e-~f~~-~~~~~-~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~ 164 (645)
..+.||+ ++++ +.||+||| +|.| .+..+ ...|.|+|||++ +++||++.|||..|..| ..|++|.+..|
T Consensus 710 ~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d---~d~iG~~~ipl~~L~~G---~r~v~L~~~~g 783 (799)
T 2zkm_X 710 PKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG---NKFLGHRIIPINALNSG---YHHLCLHSESN 783 (799)
T ss_dssp CCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT---TEEEEEEEEEGGGBCCE---EEEEEEECTTC
T ss_pred cccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC---CCccceEeeehhhcCCC---cEEEeccCCCC
Confidence 2357999 7765 69999999 6999 77644 456899999987 89999999999999866 36899987776
Q ss_pred CCCCCCceEEEEEEEE
Q 006430 165 SPPKPGASIQLELKFT 180 (645)
Q Consensus 165 ~~~~~~g~l~l~l~f~ 180 (645)
++. ..+.|.+++.+.
T Consensus 784 ~~~-~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 784 MPL-TMPALFIFLEMK 798 (799)
T ss_dssp CEE-EEEEEEEEEEEE
T ss_pred CCC-CceEEEEEEEEE
Confidence 643 247788877764
No 57
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.93 E-value=1.6e-08 Score=90.23 Aligned_cols=89 Identities=16% Similarity=0.352 Sum_probs=74.8
Q ss_pred CCcEEEEEECCeeee---ee-ccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCCCeeeeeEeecccccc-----CC
Q 006430 80 SDPYVTVVVPQATVA---RT-RVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIA-----TG 150 (645)
Q Consensus 80 ~dpyv~v~l~~~~~~---kT-~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~-----~~ 150 (645)
.||||.|.++..... +| ..+++|..|+|||+|.-.+.+ ...|.|.|++... +|++.++|++++|. .+
T Consensus 27 lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a~---~fvAn~tV~~edL~~~c~~~~ 102 (126)
T 1yrk_A 27 NQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAAE---EPVSEVTVGVSVLAERCKKNN 102 (126)
T ss_dssp CCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEETT---EEEEEEEEEHHHHHHHHHTTT
T ss_pred CCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCC
Confidence 899999999875434 76 667779999999999999875 5689999997765 89999999999998 35
Q ss_pred ceeEEEEEccCCCCCCCCCCceEEEEEEEE
Q 006430 151 ELISRWYDIIAPSGSPPKPGASIQLELKFT 180 (645)
Q Consensus 151 ~~~~~w~~l~~~~~~~~~~~g~l~l~l~f~ 180 (645)
...+.|++| ++.|+|++.+.|.
T Consensus 103 g~~e~WvdL--------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 103 GKAEFWLDL--------QPQAKVLMSVQYF 124 (126)
T ss_dssp TEEEEEEEC--------BSSCEEEEEEEEE
T ss_pred CceEEEEec--------ccCcEEEEEEEEe
Confidence 577899999 3559999999976
No 58
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.86 E-value=1.4e-08 Score=91.73 Aligned_cols=90 Identities=19% Similarity=0.409 Sum_probs=75.9
Q ss_pred CCcEEEEEECCeee---eee-ccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCCCeeeeeEeecccccc-----CC
Q 006430 80 SDPYVTVVVPQATV---ART-RVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIA-----TG 150 (645)
Q Consensus 80 ~dpyv~v~l~~~~~---~kT-~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~-----~~ 150 (645)
.||||.|.++.... .+| ..+++|..|+|||+|.-.+.+ ...|.|.|++... +|++.++|++.+|. .+
T Consensus 32 lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a~---~fVAn~tV~~edL~~~ck~~~ 107 (138)
T 2enj_A 32 VNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGKNV---DLISETTVELYSLAERCRKNN 107 (138)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECSSC---SCCEEEEEESHHHHHHHHHTT
T ss_pred CCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCC
Confidence 89999999987544 788 667779999999999999875 5689999997655 89999999999998 34
Q ss_pred ceeEEEEEccCCCCCCCCCCceEEEEEEEEe
Q 006430 151 ELISRWYDIIAPSGSPPKPGASIQLELKFTP 181 (645)
Q Consensus 151 ~~~~~w~~l~~~~~~~~~~~g~l~l~l~f~p 181 (645)
...+.|++| ++.|+|++.+.|.-
T Consensus 108 g~~e~WvdL--------eP~Gkl~v~i~~~~ 130 (138)
T 2enj_A 108 GKTEIWLEL--------KPQGRMLMNARYFL 130 (138)
T ss_dssp TCEEEEEEC--------BSSCEEEEEEEECC
T ss_pred CceEEEEec--------ccCcEEEEEEEEEE
Confidence 577899999 35699999999964
No 59
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=98.80 E-value=1.2e-08 Score=112.42 Aligned_cols=149 Identities=17% Similarity=0.016 Sum_probs=99.6
Q ss_pred cchHHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccCccCC
Q 006430 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTP 320 (645)
Q Consensus 241 ~~~f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~~~~~ 320 (645)
......+.++|.+|+++|+|++--|.| ...+.++|+.|++|||+|+||+ ++..+.+.+.-...
T Consensus 257 ~~i~~~~~~lI~~A~~~I~I~tpYf~p----------------~~~~~~aL~~Aa~rGV~VrIi~-~~~~and~y~~~~~ 319 (458)
T 3hsi_A 257 NELNQVIEDLFLQVQKKLVICTPYFNF----------------PRTLQHKIATLLENGKRVEIIV-GDKVANDFYIPPEQ 319 (458)
T ss_dssp CHHHHHHHHHHHTCSSEEEEECSSSCC----------------CHHHHHHHHHHHTTTCEEEEEE-ECGGGSTTCCCTTS
T ss_pred hHHHHHHHHHHHhcccEEEEEEeccCC----------------CHHHHHHHHHHHHCCCeEEEEE-CCccccCCccCCcc
Confidence 567889999999999999998432322 1589999999999999999997 77632221110000
Q ss_pred Cccc-cChHHH-----------HhhhcCCC-ceEEeccCCCCCCccceeeeeecceeeccceEEEeccCCCCCCcceEEE
Q 006430 321 GVMA-THDEET-----------KKFFKHSS-VNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAF 387 (645)
Q Consensus 321 ~~~~-~~~~~~-----------~~~l~~~g-v~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~~~vaf 387 (645)
.++. ..-... .+.+..+| +.+... .+. .+..|-|.+|||++ +++
T Consensus 320 ~~~~~~~~~~lye~~~~~f~~~~~~l~~~G~i~V~i~-~~~--------------~~~lHaK~~vvD~~--------~~~ 376 (458)
T 3hsi_A 320 PFKMAGALPYLYESNLRRFCEKFETQIESGQLVVRLW-RDG--------------DNTYHLKGVWVDDR--------YIL 376 (458)
T ss_dssp CCCGGGGHHHHHHHHHHHHHHHTHHHHHHTSEEEEEE-CBT--------------TBEECCCEEEETTT--------EEE
T ss_pred hhhhhcchHHHHHHhhhhhHHHHHHHHhCCCeEEEEE-ecC--------------CCceeEEEEEECCe--------EEE
Confidence 1100 000111 12244556 444421 111 23669999999998 999
Q ss_pred EccccCCCCCCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeCh---HHHHHHHHHHHHHhhhcc
Q 006430 388 IGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP---AAYDVLINFEQRWRKATK 461 (645)
Q Consensus 388 vGG~ni~~~r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gp---av~dl~~~F~~rWn~~~~ 461 (645)
+|+.|+...-+.- =..+.+.|.+| .+.++...|.+.|..+..
T Consensus 377 vGS~N~d~RS~~l--------------------------------N~E~~~~i~~~~~~l~~~l~~~f~~~~~~s~~ 421 (458)
T 3hsi_A 377 LTGNNLNPRAWRL--------------------------------DAENGLLIYDPQQQLLAQVEKEQNQIRQHTKV 421 (458)
T ss_dssp EECCCCSHHHHHT--------------------------------CEEEEEEEECTTCSSHHHHHHHHHHHHTTEEE
T ss_pred ecCCCCCcchhhh--------------------------------CceeEEEEeCCcHHHHHHHHHHHHHHHHhCeE
Confidence 9999998732211 03889999998 799999999999987543
No 60
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=98.66 E-value=2.3e-07 Score=103.56 Aligned_cols=159 Identities=18% Similarity=0.204 Sum_probs=92.8
Q ss_pred chHHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccCccCCC
Q 006430 242 TCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPG 321 (645)
Q Consensus 242 ~~f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~~~~~~ 321 (645)
.....++++|.+||++|+|++--|.| |++ +.. . . ...+.++|+.|++|||+|+||+ +..............
T Consensus 314 ~~~~~~~~~I~~A~~~I~I~tq~~~p--yf~--p~~-~-~--~~~i~~aL~~Aa~rGV~VrIl~-~~~~~~~~~~~a~~~ 384 (506)
T 1v0w_A 314 PEESALRALVASAKGHIEISQQDLNA--TCP--PLP-R-Y--DIRLYDALAAKMAAGVKVRIVV-SDPANRGAVGSGGYS 384 (506)
T ss_dssp HHHHHHHHHHHTCSSEEEEEESCSSC--CTT--TSC-S-C--CHHHHHHHHHHHHTTCEEEEEE-CCGGGCC------CC
T ss_pred cHHHHHHHHHhCcCcEEEEEeccccc--ccc--Ccc-c-c--hHHHHHHHHHHHhCCCcEEEEe-CCCCchHHHHHhHHH
Confidence 46889999999999999999632222 111 100 0 0 2589999999999999999997 654211111000000
Q ss_pred ccccChHH-----HHhhhcCCC-----------ceEEeccC---CCCCCccceeeeeecceeeccceEEEeccCCCCCCc
Q 006430 322 VMATHDEE-----TKKFFKHSS-----------VNCVLAPR---YASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNR 382 (645)
Q Consensus 322 ~~~~~~~~-----~~~~l~~~g-----------v~v~~~~~---~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~ 382 (645)
.....-+. ....+..+| +++..... +... .+.....|.|++|||++
T Consensus 385 ~~~~L~~~~~~l~~gv~ll~~g~~e~~~~~~~~l~i~~~~~~~~~~~~---------~~~~~~lHaK~~vvD~~------ 449 (506)
T 1v0w_A 385 QIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSSPNGKWA---------DGHPYAQHHKLVSVDSS------ 449 (506)
T ss_dssp CCSCTHHHHHHHHHHHHHHHTSHHHHHHHHHHHEEEEECCSSSSSSCT---------TSCCCCBCCEEEEETTT------
T ss_pred HHHHHHHhhhhhcccchhcccccchhccccccceeeeeccccCccccc---------cCccccceEEEEEECCc------
Confidence 00000000 000011112 23320000 0100 00123579999999998
Q ss_pred ceEEEEccccCCCCCCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeCh-HHHHHHHHHHHH-Hhhhc
Q 006430 383 KITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP-AAYDVLINFEQR-WRKAT 460 (645)
Q Consensus 383 ~~vafvGG~ni~~~r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gp-av~dl~~~F~~r-Wn~~~ 460 (645)
++++|+.|+.. |. ++++.+.|++| .++++...|.++ |+.+.
T Consensus 450 --~~~vGS~N~d~-rS----------------------------------~~E~~l~i~~~~~a~~l~~~f~~~~w~~s~ 492 (506)
T 1v0w_A 450 --TFYIGSKNLYP-SW----------------------------------LQDFGYIVESPEAAKQLDAKLLDPQWKYSQ 492 (506)
T ss_dssp --EEEEESCCSSC-CC----------------------------------SBCEEEEEECHHHHHHHHHHTHHHHHHHHG
T ss_pred --EEEEeCCCCCC-cc----------------------------------hhhceeEecCHHHHHHHHHHHHHHHHhhcc
Confidence 99999999955 21 24889999997 788999999975 87654
Q ss_pred c
Q 006430 461 K 461 (645)
Q Consensus 461 ~ 461 (645)
.
T Consensus 493 ~ 493 (506)
T 1v0w_A 493 E 493 (506)
T ss_dssp G
T ss_pred c
Confidence 3
No 61
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=97.68 E-value=6.1e-05 Score=69.66 Aligned_cols=53 Identities=17% Similarity=0.162 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHhccceEEEeeeeecccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEecCCCC
Q 006430 560 KSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPE 632 (645)
Q Consensus 560 ~sI~~~yl~aI~~Ak~~IYIenqYFi~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP~~p~ 632 (645)
.++.+.++.+|.+|+++|+|+++||. + +.|+++|..|++||++ |+||++..+.
T Consensus 13 ~~~~~~~~~~i~~A~~~I~i~~~~~~-~-----------------~~i~~aL~~a~~rGV~--Vril~~~~~~ 65 (155)
T 1byr_A 13 GSARVLVLSAIDSAKTSIRMMAYSFT-A-----------------PDIMKALVAAKKRGVD--VKIVIDERGN 65 (155)
T ss_dssp THHHHHHHHHHHHCSSEEEEEESSBC-C-----------------HHHHHHHHHHHHTTCE--EEEEEESTTC
T ss_pred CcHHHHHHHHHHHHhhEEEEEEEEeC-C-----------------HHHHHHHHHHHHCCCE--EEEEEeCccc
Confidence 46899999999999999999999993 3 3799999999999986 8899998764
No 62
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=97.36 E-value=0.00018 Score=69.89 Aligned_cols=49 Identities=18% Similarity=0.165 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHhccceEEEeeeeecccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEec
Q 006430 560 KSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIP 628 (645)
Q Consensus 560 ~sI~~~yl~aI~~Ak~~IYIenqYFi~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP 628 (645)
.+....++.+|.+|+++|+|+. |++++ ++|+++|+.|++|||+ |+||+-
T Consensus 45 ~~~~~~ll~~I~~A~~sI~i~~-y~~~~-----------------~~i~~aL~~aa~rGV~--Vrii~D 93 (196)
T 4ggj_A 45 ESSLSRLLRALLAARSSLELCL-FAFSS-----------------PQLGRAVQLLHQRGVR--VRVITD 93 (196)
T ss_dssp CCHHHHHHHHHHTCSSEEEEEE-SCBCC-----------------HHHHHHHHHHHHTTCE--EEEEES
T ss_pred HHHHHHHHHHHHHhheEEEEEE-EEeCC-----------------HHHHHHHHHHHHcCCc--EEEEEe
Confidence 3456789999999999999998 55555 3799999999999987 667774
No 63
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=97.25 E-value=0.00034 Score=68.74 Aligned_cols=50 Identities=18% Similarity=0.091 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHhccceEEEeeeeecccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEecC
Q 006430 560 KSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPM 629 (645)
Q Consensus 560 ~sI~~~yl~aI~~Ak~~IYIenqYFi~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP~ 629 (645)
....+.++.+|.+|++.|+|+. |++++ .+|+++|+.|++|||+ |+||+..
T Consensus 57 ~~~~~~ii~~I~~A~~sI~i~~-Y~~~~-----------------~~I~~aL~~Aa~RGV~--VRii~D~ 106 (220)
T 4gel_A 57 LRNVAKIVEQIDRAVYSIDLAI-YTFTS-----------------LFLADSIKRALQRGVI--IRIISDG 106 (220)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEC-SCBCC-----------------HHHHHHHHHHHHHTCE--EEEECCT
T ss_pred HHHHHHHHHHHHHhhhEEEEEE-EEeCC-----------------HHHHHHHHHHHHcCCe--EEEEEec
Confidence 4456778999999999999997 66665 3899999999999987 7778753
No 64
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=97.19 E-value=0.00068 Score=77.43 Aligned_cols=136 Identities=16% Similarity=0.182 Sum_probs=94.9
Q ss_pred CCccCCcchHHHHHHHHHhccc----eEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCC
Q 006430 235 GKLYKPGTCWEDICHAISEAHH----LIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKT 310 (645)
Q Consensus 235 g~~y~~~~~f~~l~~aI~~Ak~----~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~g 310 (645)
||....+.+...|..+|.+|++ +|+|.+ | +|. ...+.++|.+|+++||+|+||+ .++=
T Consensus 512 sP~~~~~~i~~~i~~eI~~Ak~G~~a~I~ik~----n--~l~-----------D~~ii~aL~~As~~GV~V~LIV-RGiC 573 (705)
T 2o8r_A 512 ARYNMGEAITNLIEREIENVKRGKRGYMLLKM----N--GLQ-----------DKNVITQLYRASEAGVEIDLIV-RGIC 573 (705)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEE----S--CBC-----------CHHHHHHHHHHHHTTCEEEEEE-SSCB
T ss_pred CCchHHHHHHHHHHHHHHHHhcCCCCEEEEEc----C--CCC-----------CHHHHHHHHHHHHCCCeEEEEE-cccc
Confidence 7777777888999999999998 999873 2 111 1689999999999999999998 5542
Q ss_pred ccCccCccCCCccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecceeeccceEEEe---ccCCCCCCcceEEE
Q 006430 311 SHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLV---DTQASGNNRKITAF 387 (645)
Q Consensus 311 s~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVI---D~~~~~~~~~~vaf 387 (645)
+.. ++ .+ ...++.|. .+-.+ + . .|-|+.+. |+. .+|
T Consensus 574 ~L~-Pg--------------v~--~sdni~V~---Sivgr---~---------L-eh~RIy~f~~gd~~--------~~~ 612 (705)
T 2o8r_A 574 CLV-PD--------------MP--QSRNIRVT---RLVDM---Y---------L-EHSRIWCFHNGGKE--------EVF 612 (705)
T ss_dssp CSC-CS--------------SG--GGTTEEEE---ECCSS---S---------E-ECCCEEEECGGGSC--------EEE
T ss_pred ccC-CC--------------CC--CCCCeEEE---eeHHH---H---------H-hcCEEEEEECCCCc--------EEE
Confidence 221 11 01 12345554 11111 1 2 25588888 555 999
Q ss_pred EccccCCCCCCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeCh-HHHHHHHHHHHHHhhhcc
Q 006430 388 IGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP-AAYDVLINFEQRWRKATK 461 (645)
Q Consensus 388 vGG~ni~~~r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gp-av~dl~~~F~~rWn~~~~ 461 (645)
+|+.|+....++- -..+.+.|..| .++.|...|...|....+
T Consensus 613 IGSAn~m~Rnl~~--------------------------------r~Ev~~~i~d~~~~~~l~~i~~~~l~d~~~ 655 (705)
T 2o8r_A 613 ISSADWMKRNLYN--------------------------------RIETACPVLDPTLRREIIDILEIQLRDNIK 655 (705)
T ss_dssp EESCCBCHHHHHT--------------------------------SBCEEEECCSHHHHHHHHHHHHHHHHCCSS
T ss_pred Eeccccchhhhhh--------------------------------eeEEEEEEcCHHHHHHHHHHHHHhhhhhhc
Confidence 9999988733321 13788899987 778888899999987654
No 65
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=95.99 E-value=0.0055 Score=70.23 Aligned_cols=48 Identities=19% Similarity=0.275 Sum_probs=42.5
Q ss_pred HHHHHHHHhccc-----eEEEeeeeec-ccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEecCCC
Q 006430 564 TAYIQAIRSAQH-----FIYIENQYFL-GSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWP 631 (645)
Q Consensus 564 ~~yl~aI~~Ak~-----~IYIenqYFi-~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP~~p 631 (645)
..++.+|.+|++ +|+| ++||+ ++. .|+++|+.|+++|++ |+||++..+
T Consensus 350 ~~v~~~I~~A~~dp~v~~I~i-t~Y~~~~d~-----------------~I~~AL~~AA~rGV~--VrVLvd~~a 403 (687)
T 1xdp_A 350 EHVLELLRQASFDPSVLAIKI-NIYRVAKDS-----------------RIIDSMIHAAHNGKK--VTVVVELQA 403 (687)
T ss_dssp HHHHHHHHHHHHCTTEEEEEE-EESSCCTTC-----------------HHHHHHHHHHHTTCE--EEEEECTTC
T ss_pred hhHHHHHHHHhhCCcceEEEE-EeeeecCcH-----------------HHHHHHHHHHhcCCE--EEEEECCCc
Confidence 567889999997 9999 99999 542 799999999999987 889999887
No 66
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=94.93 E-value=0.018 Score=60.60 Aligned_cols=48 Identities=25% Similarity=0.146 Sum_probs=40.3
Q ss_pred cchHHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEE
Q 006430 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLV 305 (645)
Q Consensus 241 ~~~f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~ 305 (645)
+.....+.+.|.+|+++|++..|. + . ...+.+.|.++++|||+|++++
T Consensus 118 ~~I~~ri~eli~~A~~eI~i~~~~--~--~-------------l~~l~~~L~~a~~RGV~Vrvi~ 165 (342)
T 3qph_A 118 DEAIEMFRESLYSAKNEVIVVTPS--E--F-------------FETIREDLIKTLERGVTVSLYI 165 (342)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEECH--H--H-------------HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHhhheEEEEEeCH--H--H-------------HHHHHHHHHHHHhCCCEEEEEE
Confidence 567899999999999999998652 1 1 1478899999999999999996
No 67
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=93.74 E-value=0.059 Score=53.54 Aligned_cols=51 Identities=24% Similarity=0.090 Sum_probs=42.8
Q ss_pred cchHHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecC
Q 006430 241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDD 308 (645)
Q Consensus 241 ~~~f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~ 308 (645)
+...+.+.+.|++|+++|++..|. . . -.+|.+.|.+|.+|||.|+|+++..
T Consensus 9 e~Ii~r~~e~I~~A~~el~lsi~~--e--------~-------l~~l~~~L~~A~~rGV~V~liv~~~ 59 (233)
T 2f5t_X 9 DEAIEMFRESLYSAKNEVIVVTPS--E--------F-------FETIREDLIKTLERGVTVSLYIDKI 59 (233)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEECG--G--------G-------HHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred HHHHHHHHHHHHHhhhEEEEEeCH--H--------H-------HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 567899999999999999997661 1 1 2589999999999999999999543
No 68
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=89.94 E-value=0.38 Score=50.46 Aligned_cols=54 Identities=9% Similarity=0.073 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHHHhccceEEEeeeeecccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEecCCCC
Q 006430 559 DKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPE 632 (645)
Q Consensus 559 e~sI~~~yl~aI~~Ak~~IYIenqYFi~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP~~p~ 632 (645)
...|.+....+|.+|++.||+..++..- .++..+|..|++||++ |++++|..|+
T Consensus 117 ~~~I~~ri~eli~~A~~eI~i~~~~~~l------------------~~l~~~L~~a~~RGV~--Vrvi~~~~~d 170 (342)
T 3qph_A 117 FDEAIEMFRESLYSAKNEVIVVTPSEFF------------------ETIREDLIKTLERGVT--VSLYIDKIPD 170 (342)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEECHHHH------------------HHHHHHHHHHHHTTCE--EEEEESSCCC
T ss_pred HHHHHHHHHHHHHhhheEEEEEeCHHHH------------------HHHHHHHHHHHhCCCE--EEEEECCCCC
Confidence 4679999999999999999999865432 4788999999999987 7788888765
No 69
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=83.90 E-value=9.5 Score=37.14 Aligned_cols=41 Identities=12% Similarity=0.297 Sum_probs=33.6
Q ss_pred eeeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCC
Q 006430 91 ATVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDV 131 (645)
Q Consensus 91 ~~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~ 131 (645)
...++|.|...+.+|.|+|++.+.++.. ...|.|++++...
T Consensus 76 ~se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 76 ISEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp BSCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred ceeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 3457999999999999999999999875 4558888887644
No 70
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=82.85 E-value=2.1 Score=42.23 Aligned_cols=53 Identities=11% Similarity=0.117 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHHHhccceEEEeeeeecccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEecCCC
Q 006430 559 DKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWP 631 (645)
Q Consensus 559 e~sI~~~yl~aI~~Ak~~IYIenqYFi~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP~~p 631 (645)
...|.+-...+|++|++.||+. ++... .+.|..+|.+|.+||+. |.|++...+
T Consensus 8 ~e~Ii~r~~e~I~~A~~el~ls----i~~e~--------------l~~l~~~L~~A~~rGV~--V~liv~~~~ 60 (233)
T 2f5t_X 8 FDEAIEMFRESLYSAKNEVIVV----TPSEF--------------FETIREDLIKTLERGVT--VSLYIDKIP 60 (233)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEE----ECGGG--------------HHHHHHHHHHHHHTTCE--EEEEESSCC
T ss_pred HHHHHHHHHHHHHHhhhEEEEE----eCHHH--------------HHHHHHHHHHHHHCCCE--EEEEEcCCc
Confidence 4678889999999999999993 33321 25899999999999987 888888654
No 71
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=79.80 E-value=10 Score=34.84 Aligned_cols=98 Identities=12% Similarity=0.124 Sum_probs=67.9
Q ss_pred cEEEEEECCeeeeeeccccCCCCCeeeeEEEEeecCC--------CCeEEEEEEEcCCCCCeeeeeEeecccccc-CCce
Q 006430 82 PYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHP--------LSNLEIQVKDDDVFGAQIIGTAAIPAHTIA-TGEL 152 (645)
Q Consensus 82 pyv~v~l~~~~~~kT~v~~~t~~P~w~e~f~~~~~~~--------~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~-~~~~ 152 (645)
.||.+.+-.-..+.|.+.+ ..+|.+|-+-.+.+... ...+.+++.......-..+|.+.|+|.++. ..+.
T Consensus 44 tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~g~~~~tla~~~I~l~~lLe~~~~ 122 (156)
T 2yrb_A 44 TFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILEKSGR 122 (156)
T ss_dssp EEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECSSCEEEEEEEEECCSHHHHCCSC
T ss_pred EEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEeeCCCceEEEEEEEEhHHhhCcCCc
Confidence 3555554444445777776 78999998877777543 346888888765434589999999999987 3344
Q ss_pred eEEEEEccCCCCCCCCCCceEEEEEEEEe
Q 006430 153 ISRWYDIIAPSGSPPKPGASIQLELKFTP 181 (645)
Q Consensus 153 ~~~w~~l~~~~~~~~~~~g~l~l~l~f~p 181 (645)
+.+-.+|.+..+. ...-|.|.+.++...
T Consensus 123 i~g~~~L~g~~g~-~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 123 IFCTASLIGTKGD-IPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEECBSSSC-CTTSEEEEEEEEEEE
T ss_pred eEEEEEEEcCCCC-cceEEEEEEEEEEec
Confidence 5666788776653 124599999888644
No 72
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=71.96 E-value=22 Score=42.09 Aligned_cols=69 Identities=12% Similarity=0.119 Sum_probs=45.8
Q ss_pred CCcEEEEEE--CC---eeeeeeccccCCCCCeeeeEEEEeecC----CCCeEEEEEEEcCCC-------------CCeee
Q 006430 80 SDPYVTVVV--PQ---ATVARTRVLKNSQEPVWNEHFNIPLAH----PLSNLEIQVKDDDVF-------------GAQII 137 (645)
Q Consensus 80 ~dpyv~v~l--~~---~~~~kT~v~~~t~~P~w~e~f~~~~~~----~~~~l~i~v~d~~~~-------------~~~~i 137 (645)
.+-||++.+ ++ +....|+.+.-..+|.|||.++|++.- ..+.|.|+||+...- ....+
T Consensus 235 ~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~l 314 (940)
T 2wxf_A 235 MKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPI 314 (940)
T ss_dssp CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC----------------CEEE
T ss_pred ceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEecCCccCccccccccccccceE
Confidence 567888766 44 222345555557789999998887542 367789999985321 14589
Q ss_pred eeEeecccccc
Q 006430 138 GTAAIPAHTIA 148 (645)
Q Consensus 138 G~~~i~l~~l~ 148 (645)
|.+.+++.+..
T Consensus 315 g~~~~~lFd~~ 325 (940)
T 2wxf_A 315 AWANLMLFDYK 325 (940)
T ss_dssp EEEEEESBCTT
T ss_pred EEEeeeEECCc
Confidence 99999887654
No 73
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=65.57 E-value=31 Score=41.25 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=44.8
Q ss_pred CCcEEEEEE--CC---eeeeeeccccCCCCCeeeeEEEEeecC----CCCeEEEEEEEcCCC-----CCeeeeeEeeccc
Q 006430 80 SDPYVTVVV--PQ---ATVARTRVLKNSQEPVWNEHFNIPLAH----PLSNLEIQVKDDDVF-----GAQIIGTAAIPAH 145 (645)
Q Consensus 80 ~dpyv~v~l--~~---~~~~kT~v~~~t~~P~w~e~f~~~~~~----~~~~l~i~v~d~~~~-----~~~~iG~~~i~l~ 145 (645)
.+.||++.+ ++ +...+|+.+ ...+|.|||..+|++.- ..+.|.|+||+.... ....+|.+.++|.
T Consensus 375 ~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lf 453 (1091)
T 3hhm_A 375 DKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLF 453 (1091)
T ss_dssp CCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESB
T ss_pred ceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEecCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeE
Confidence 567888877 33 222344433 35678899998887542 367799999986543 1358999999987
Q ss_pred ccc
Q 006430 146 TIA 148 (645)
Q Consensus 146 ~l~ 148 (645)
+..
T Consensus 454 d~~ 456 (1091)
T 3hhm_A 454 DYT 456 (1091)
T ss_dssp CTT
T ss_pred ccC
Confidence 654
No 74
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=44.96 E-value=1.1e+02 Score=36.32 Aligned_cols=69 Identities=16% Similarity=0.133 Sum_probs=44.0
Q ss_pred CCcEEEEEE--CCeee--eeeccccCCCCCeeeeEEEEeecC----CCCeEEEEEEEcCCC-----------------CC
Q 006430 80 SDPYVTVVV--PQATV--ARTRVLKNSQEPVWNEHFNIPLAH----PLSNLEIQVKDDDVF-----------------GA 134 (645)
Q Consensus 80 ~dpyv~v~l--~~~~~--~kT~v~~~t~~P~w~e~f~~~~~~----~~~~l~i~v~d~~~~-----------------~~ 134 (645)
.+-||++.+ ++... .+|+-+.-+.+|.|||.++|++.- ..+.|.|+||+.... ..
T Consensus 238 ~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (961)
T 1e7u_A 238 LTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKA 317 (961)
T ss_dssp EEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC--------------------
T ss_pred ceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecccCccccccccccccccccccc
Confidence 567888765 44221 345444446789999998887442 366789999974321 13
Q ss_pred eeeeeEeecccccc
Q 006430 135 QIIGTAAIPAHTIA 148 (645)
Q Consensus 135 ~~iG~~~i~l~~l~ 148 (645)
..+|.+.++|.+..
T Consensus 318 ~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 318 QLLYYVNLLLIDHR 331 (961)
T ss_dssp CEEEEEEEESBCTT
T ss_pred eeEEEEeeeeecCC
Confidence 47888888886654
No 75
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=30.54 E-value=78 Score=38.00 Aligned_cols=69 Identities=9% Similarity=0.057 Sum_probs=40.5
Q ss_pred CCcEEEEEE--CCee---eeeeccccCCCCCeeeeEEEEeecC----CCCeEEEEEEEcCCC------------------
Q 006430 80 SDPYVTVVV--PQAT---VARTRVLKNSQEPVWNEHFNIPLAH----PLSNLEIQVKDDDVF------------------ 132 (645)
Q Consensus 80 ~dpyv~v~l--~~~~---~~kT~v~~~t~~P~w~e~f~~~~~~----~~~~l~i~v~d~~~~------------------ 132 (645)
.+-||++.+ ++.. ...|+.+.-+.+|.|||.++|++.- ..+.|.|+||+....
T Consensus 371 ~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~ 450 (1092)
T 2y3a_A 371 VKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAVLDKVKTKKSTKTINPSKYQTI 450 (1092)
T ss_dssp CCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC---------------------
T ss_pred ceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEecCccccccccccccccccccc
Confidence 455666443 4422 2245444447789999998887543 356788999875211
Q ss_pred ----C-CeeeeeEeecccccc
Q 006430 133 ----G-AQIIGTAAIPAHTIA 148 (645)
Q Consensus 133 ----~-~~~iG~~~i~l~~l~ 148 (645)
+ ...+|.+.+++.+..
T Consensus 451 ~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 451 RKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp ---------CCEEEEESBCTT
T ss_pred cccccccceeEEEeeeeECCc
Confidence 1 237888888876644
No 76
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=28.71 E-value=1.2e+02 Score=26.86 Aligned_cols=77 Identities=13% Similarity=0.077 Sum_probs=46.0
Q ss_pred CCCCceecCCCCccCCcchHHHHHHHHHhc--cceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHH-hhcCCEE
Q 006430 225 GILPEIPLDGGKLYKPGTCWEDICHAISEA--HHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYK-SEEGVRV 301 (645)
Q Consensus 225 ~~~~~~~l~~g~~y~~~~~f~~l~~aI~~A--k~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~-a~rGV~V 301 (645)
|+...+++..+.+|-.+.++.++.-+...+ .+.|. ..|.+...+++......+ ......+.+.++.. ...||++
T Consensus 11 ~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~-~VFf~~DGV~~a~~~q~p--~~~~~~l~~~~~~La~~~gv~l 87 (140)
T 2d1p_A 11 GSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELS-SVFFYREGVYNANQLTSP--ASDEFDLVRAWQQLNAQHGVAL 87 (140)
T ss_dssp CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEE-EEEECGGGGGGGBTTCCC--CTTSCCHHHHHHHHHHHHCCEE
T ss_pred CceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccC-EEEEechHHHHHhcCCCC--ccccCChHHHHHHHHHHcCCEE
Confidence 455556666677787677777666555543 34441 555567777765433222 22125677778877 5679996
Q ss_pred EEE
Q 006430 302 LLL 304 (645)
Q Consensus 302 riL 304 (645)
++=
T Consensus 88 ~vC 90 (140)
T 2d1p_A 88 NIC 90 (140)
T ss_dssp EEE
T ss_pred EEe
Confidence 655
No 77
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=26.54 E-value=1.9e+02 Score=28.67 Aligned_cols=80 Identities=13% Similarity=0.122 Sum_probs=55.0
Q ss_pred CCcHHHHHHHHhhcCCEEEEEEecCCCccCccCccCCCccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecce
Q 006430 284 DLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTI 363 (645)
Q Consensus 284 ~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~ 363 (645)
..++...+.+..++|++|.+++ ....+.. ..+++..+++.+.||++.+..+ . +
T Consensus 50 gvrfy~~f~~h~~~Ggkv~~Il-GgstsQr-----------lTSKQavEElL~cGvev~IiNr--k-----------R-- 102 (358)
T 2c1l_A 50 GVRFYETFTEHINQGGRVIAIL-GGSTSQR-----------LSSRQVVEELLNRGVEVHIINR--K-----------R-- 102 (358)
T ss_dssp TTTTHHHHHHHHHTTCEEEEEE-ECCSSSC-----------CBBHHHHHHHHHTTCEEEEEEC--S-----------S--
T ss_pred ceeecHHHHHHHhcCCcEEEEE-ccccccc-----------ccHHHHHHHHHhcCCceEEeee--e-----------e--
Confidence 4799999999999999999997 3222221 1157888899999999885211 1 1
Q ss_pred eeccceEEEeccCCCCCCcceEEEEccccCCCC
Q 006430 364 FTHHQKCVLVDTQASGNNRKITAFIGGIDLCDG 396 (645)
Q Consensus 364 ~r~HqK~vVID~~~~~~~~~~vafvGG~ni~~~ 396 (645)
--|-|+...-.. +.-.-.||+-|+...
T Consensus 103 -i~HaK~Yg~~~n-----~g~~LIV~SgNfT~p 129 (358)
T 2c1l_A 103 -ILHAKLYGTSNN-----LGESLVVSSGNFTGP 129 (358)
T ss_dssp -CBCCEEEEEEET-----TEEEEEEESCCBSTT
T ss_pred -ecchhhhcccCC-----CceEEEEecCCcccc
Confidence 138888887543 222667888887763
No 78
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=26.09 E-value=76 Score=27.10 Aligned_cols=44 Identities=18% Similarity=0.425 Sum_probs=32.8
Q ss_pred CcHHHHHHHHhhcCCEEEEEEecCCCccCccCccCCCccccChHHHHhhhcCCCceEE
Q 006430 285 LTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCV 342 (645)
Q Consensus 285 ~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~ 342 (645)
.-+.+.+.+|.+|||.|.+. |+.-..- ..++..+.++..||.++
T Consensus 90 ewikdfieeakergvevfvv-ynnkddd-------------rrkeaqqefrsdgvdvr 133 (162)
T 2l82_A 90 EWIKDFIEEAKERGVEVFVV-YNNKDDD-------------RRKEAQQEFRSDGVDVR 133 (162)
T ss_dssp HHHHHHHHHHHHTTCEEEEE-EECSCHH-------------HHHHHHHHHCCSSCEEE
T ss_pred HHHHHHHHHHHhcCcEEEEE-ecCCCch-------------hHHHHHHHhhhcCceee
Confidence 56888999999999999998 7765210 02445667889999887
No 79
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=24.66 E-value=1.3e+02 Score=24.84 Aligned_cols=63 Identities=13% Similarity=0.141 Sum_probs=36.3
Q ss_pred cCCcchHHHHHHHHHhc---cc-eEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEE
Q 006430 238 YKPGTCWEDICHAISEA---HH-LIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLV 305 (645)
Q Consensus 238 y~~~~~f~~l~~aI~~A---k~-~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~ 305 (645)
|..+..+.++.-+...+ .+ .+ .-|.+.+.+++.+.+..+. . ...+.+.|+...+.||+|++-.
T Consensus 13 ~~~~~~~~al~~a~~~~~~~g~~~v--~vff~~dgV~~~~~~~~~~-~--~~~~~~~l~~l~~~gv~v~~C~ 79 (117)
T 1jx7_A 13 YGSESLFNSLRLAIALREQESNLDL--RLFLMSDAVTAGLRGQKPG-E--GYNIQQMLEILTAQNVPVKLCK 79 (117)
T ss_dssp TTCSHHHHHHHHHHHHHHHCTTCEE--EEEECGGGGGGGBSCCCCS-S--SCCHHHHHHHHHHTTCCEEEEH
T ss_pred CCcHHHHHHHHHHHHHHhcCCCccE--EEEEEchHHHHHhcCCCCC-c--CCCHHHHHHHHHHCCCEEEEeH
Confidence 43345555544444332 33 44 3344467777665433221 1 2578899999889999887773
No 80
>1t3g_A X-linked interleukin-1 receptor accessory protein-like 1; TIR, IL-1RAPL, IL-1R, TLR, membrane protein; 2.30A {Homo sapiens}
Probab=21.05 E-value=1.2e+02 Score=27.51 Aligned_cols=55 Identities=13% Similarity=0.272 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHhccceEEEeeeeec-ccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEec
Q 006430 560 KSIQTAYIQAIRSAQHFIYIENQYFL-GSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIP 628 (645)
Q Consensus 560 ~sI~~~yl~aI~~Ak~~IYIenqYFi-~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP 628 (645)
.+|......+|+++++.|.|-++=|+ .+. |- ..++..++..+...+.+ +|++|..
T Consensus 55 ~~i~~~i~~~I~~Sr~~IvVlS~~y~~~S~--wc-----------~~El~~a~~~~~~~~~~-~vI~I~~ 110 (159)
T 1t3g_A 55 GTYIEDVARCVDQSKRLIIVMTPNYVVRRG--WS-----------IFELETRLRNMLVTGEI-KVILIEC 110 (159)
T ss_dssp TTHHHHHHHHHHTBSEEEEEECHHHHHTTT--TH-----------HHHHSHHHHHHHHTTSS-EEEEEEC
T ss_pred cchHHHHHHHHHHcCEEEEEEccchhhcCh--HH-----------HHHHHHHHHHHHhcCCC-EEEEEEe
Confidence 35777899999999999999999886 543 31 25677777777665544 5666643
Done!