Query         006430
Match_columns 645
No_of_seqs    343 out of 2894
Neff          7.1 
Searched_HMMs 13730
Date          Tue Mar 26 00:48:40 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006430.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006430hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1v0wa1 d.136.1.2 (A:6-263) Ph  99.9   2E-27 1.4E-31  240.7   5.4  157  241-463    63-225 (258)
  2 d2ep6a1 b.7.1.1 (A:92-217) Mul  99.8 3.9E-19 2.9E-23  159.8  14.6  118   17-180     6-124 (126)
  3 d1gmia_ b.7.1.1 (A:) Domain fr  99.8 1.4E-18   1E-22  158.5  14.8  132   12-183     1-135 (136)
  4 d1wfja_ b.7.1.2 (A:) C2 domain  99.7 3.1E-18 2.3E-22  155.8  12.6  122   16-184     9-133 (136)
  5 d1rlwa_ b.7.1.1 (A:) Domain fr  99.7 8.4E-18 6.1E-22  150.7  12.9  120   17-181     3-125 (126)
  6 d1a25a_ b.7.1.2 (A:) C2 domain  99.7 1.4E-16   1E-20  144.0  13.8  107   12-161    10-123 (132)
  7 d2nq3a1 b.7.1.1 (A:13-145) E3   99.7 2.6E-16 1.9E-20  142.6  13.6  122   15-181     4-131 (133)
  8 d2cjta1 b.7.1.1 (A:1-128) Unc-  99.7 8.1E-16 5.9E-20  138.4  16.0  116   17-179     2-127 (128)
  9 d1rh8a_ b.7.1.2 (A:) Piccolo {  99.6 1.5E-16 1.1E-20  145.3  10.2  117    4-162     3-139 (142)
 10 d1rsya_ b.7.1.2 (A:) Synaptoga  99.6 7.9E-16 5.7E-20  141.0  13.1  104   15-160    32-141 (143)
 11 d1qasa2 b.7.1.1 (A:626-756) PI  99.6 1.8E-15 1.3E-19  136.5  15.2  121   16-180     3-130 (131)
 12 d1dqva1 b.7.1.2 (A:295-424) Sy  99.6 3.9E-15 2.9E-19  134.0  11.2  104   15-160    16-127 (130)
 13 d1byra_ d.136.1.1 (A:) Nucleas  99.5 1.4E-14   1E-18  133.4  12.2  134  242-460    13-148 (152)
 14 d2bwqa1 b.7.1.2 (A:729-853) Re  99.5 2.7E-14   2E-18  127.4  12.4  101   16-159    13-124 (125)
 15 d1w15a_ b.7.1.2 (A:) Synaptota  99.5 4.2E-14 3.1E-18  128.4  13.3   90   16-147    14-111 (138)
 16 d1wfma_ b.7.1.2 (A:) Synaptota  99.5 5.2E-14 3.8E-18  127.9  13.8  101   15-160    24-131 (138)
 17 d2cm5a1 b.7.1.2 (A:541-677) C2  99.5 9.2E-15 6.7E-19  132.4   7.0  106   15-164    13-126 (137)
 18 d1ugka_ b.7.1.2 (A:) Synaptota  99.5 1.6E-13 1.2E-17  124.6  14.6  105   16-161    21-133 (138)
 19 d1uowa_ b.7.1.2 (A:) Synaptoga  99.5 1.8E-13 1.3E-17  127.0  13.3  102   16-159    24-145 (157)
 20 d1bdya_ b.7.1.1 (A:) Domain fr  99.4 2.3E-13 1.7E-17  121.2  12.4   91   79-181    23-122 (123)
 21 d1v0wa2 d.136.1.2 (A:264-514)   99.4 4.4E-13 3.2E-17  133.6  14.3  161  244-462    56-234 (246)
 22 d1dqva2 b.7.1.2 (A:425-569) Sy  99.4 1.6E-14 1.1E-18  132.4   2.6  107   16-165    19-133 (145)
 23 d2zkmx2 b.7.1.1 (X:678-799) Ph  99.2 2.4E-11 1.8E-15  107.7  12.9   93   80-179    18-120 (122)
 24 d1v0wa1 d.136.1.2 (A:6-263) Ph  97.9 9.9E-06 7.2E-10   79.9   8.1   60  559-631    62-121 (258)
 25 d1v0wa2 d.136.1.2 (A:264-514)   97.9 8.1E-06 5.9E-10   80.0   6.8   63  560-633    53-115 (246)
 26 d1byra_ d.136.1.1 (A:) Nucleas  97.6   6E-05 4.4E-09   67.4   7.3   53  560-632    12-64  (152)
 27 d2o8ra3 d.136.1.4 (A:318-505)   96.8   0.012   9E-07   53.2  14.3  138  242-454    33-177 (188)
 28 d1xdpa3 d.136.1.4 (A:315-501)   96.2   0.014   1E-06   52.8  10.4  137  242-454    34-176 (187)
 29 d1e7ua2 b.7.1.1 (A:351-524) Ph  87.1     2.7  0.0002   37.2  11.8   50   80-129    29-86  (174)
 30 d2o8ra4 d.136.1.4 (A:506-691)   87.0     1.3 9.4E-05   39.8   9.4  131  241-459    11-146 (186)
 31 d1xdpa4 d.136.1.4 (A:502-688)   81.9     2.5 0.00018   37.9   8.8  132  241-459    11-147 (187)
 32 d1xdpa4 d.136.1.4 (A:502-688)   37.0      11  0.0008   33.5   3.5   29  599-629    36-64  (187)
 33 d1xdpa3 d.136.1.4 (A:315-501)   35.8      15  0.0011   32.3   4.2   34  606-641    67-100 (187)
 34 d2o8ra4 d.136.1.4 (A:506-691)   31.7      14   0.001   32.8   3.3   27  600-628    37-63  (186)
 35 d2o8ra3 d.136.1.4 (A:318-505)   31.7      14   0.001   32.6   3.2   34  606-641    66-99  (188)
 36 d1jx7a_ c.114.1.1 (A:) Hypothe  30.1      59  0.0043   25.5   7.0   64  238-304    13-78  (117)
 37 d2yrba1 b.7.1.1 (A:596-737) Fa  29.0 1.5E+02   0.011   24.5   9.8   97   80-178    34-139 (142)
 38 d2f5tx2 d.136.1.5 (X:110-246)   23.0      83  0.0061   25.0   6.2   52  241-310     9-60  (137)
 39 d2f5tx2 d.136.1.5 (X:110-246)   22.4 1.1E+02  0.0079   24.3   6.7   49  562-632    11-61  (137)

No 1  
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]}
Probab=99.93  E-value=2e-27  Score=240.74  Aligned_cols=157  Identities=18%  Similarity=0.183  Sum_probs=117.3

Q ss_pred             cchHHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcC--CEEEEEEecCCCccCccCcc
Q 006430          241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEG--VRVLLLVWDDKTSHDKLGVK  318 (645)
Q Consensus       241 ~~~f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rG--V~VriL~~D~~gs~~~~~~~  318 (645)
                      +++|++|+++|++||++|+|++|+|.|+-.          .  ...|.++|++||+||  |+||||+ |.+|+....   
T Consensus        63 ~~~~~~~~~~I~~A~~~I~i~~~~~~pd~~----------~--~~~i~~aL~~aA~rG~~V~VriL~-d~~gs~~~~---  126 (258)
T d1v0wa1          63 KRLLAKMTENIGNATRTVDISTLAPFPNGA----------F--QDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMN---  126 (258)
T ss_dssp             HHHHHHHHHHHHTCSSEEEEEEESSCCCHH----------H--HHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCC---
T ss_pred             HHHHHHHHHHHHHhccEEEEEEEEEcCCch----------H--HHHHHHHHHHHHhCCCCeEEEEEe-CCccccccc---
Confidence            578999999999999999999999866322          1  268999999999999  9999995 999876421   


Q ss_pred             CCCccccChHHHHhhhcCCCceE----EeccCCCCCCccceeeeeecceeeccceEEEeccCCCCCCcceEEEEccccCC
Q 006430          319 TPGVMATHDEETKKFFKHSSVNC----VLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLC  394 (645)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~~gv~v----~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~~~vafvGG~ni~  394 (645)
                            ......++.|...++++    .+......        .....+.|||+|++||||+        +|||||+||+
T Consensus       127 ------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~rnH~Ki~VVDg~--------~a~vGG~Ni~  184 (258)
T d1v0wa1         127 ------VIPSKYRDELTAKLGKAAENITLNVASMT--------TSKTAFSWNHSKILVVDGQ--------SALTGGINSW  184 (258)
T ss_dssp             ------CHHHHHHHHHHHHHGGGGGGEEEEEEEEC--------SBTTTTBCBCCCEEEETTT--------EEEEESCCCC
T ss_pred             ------cchHHHHHHHHHhccceeecccccccccc--------ccccccccccceEEEEcCC--------EEEECCcccC
Confidence                  01233444554444432    21100000        0112356899999999998        9999999999


Q ss_pred             CCCCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeChHHHHHHHHHHHHHhhhcccc
Q 006430          395 DGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLT  463 (645)
Q Consensus       395 ~~r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gpav~dl~~~F~~rWn~~~~~~  463 (645)
                      ++||++.                            ..+|||++++|+||+|.+++..|.++|+.+++++
T Consensus       185 ~~~~~~~----------------------------~~~w~D~~~~v~Gp~v~~~~~~F~~~W~~~~~e~  225 (258)
T d1v0wa1         185 KDDYLDT----------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQNK  225 (258)
T ss_dssp             HHHHTSS----------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccCC----------------------------CCCeeeeEEEEECHHHHHHHHHHHHHHHHHhCCC
Confidence            9888652                            2379999999999999999999999999988764


No 2  
>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79  E-value=3.9e-19  Score=159.78  Aligned_cols=118  Identities=25%  Similarity=0.421  Sum_probs=102.5

Q ss_pred             eEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCeeeeee
Q 006430           17 GDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVART   96 (645)
Q Consensus        17 g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~~~~kT   96 (645)
                      |.|.|+|++|++|+.++..+.                                          +||||++.+++++ .+|
T Consensus         6 G~L~V~v~~A~~L~~~d~~g~------------------------------------------~Dpyv~v~~~~~~-~~T   42 (126)
T d2ep6a1           6 GILQVKVLKAADLLAADFSGK------------------------------------------SDPFCLLELGNDR-LQT   42 (126)
T ss_dssp             EEEEEEEEEEESCCCSSSSSC------------------------------------------CCEEEEEEETTEE-EEC
T ss_pred             EEEEEEEEEeECCCCCCCCCC------------------------------------------cCeEEEEEcCCeE-EEE
Confidence            889999999999998887665                                          8999999998876 699


Q ss_pred             ccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCCCCCCCCCCceEEE
Q 006430           97 RVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASIQL  175 (645)
Q Consensus        97 ~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~~~~~~~g~l~l  175 (645)
                      ++++++.||.|||+|.|.+......|.|+|||++.++ +++||++.|+|.++..+.  .+||.|. ......+..|+|+|
T Consensus        43 ~~~~~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~~~~d~~lG~~~i~l~~l~~~~--~~~~~l~-~~~~~~~~~G~i~l  119 (126)
T d2ep6a1          43 HTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLK-NKDLEQAFKGVIYL  119 (126)
T ss_dssp             CCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEEEEECCBCEEEGGGCCSSC--CEECCCB-CSCTTSCCSSEEEE
T ss_pred             EeeCCceeEEEEEEEEEEEeccCceeEEEEEEccCCcCcceEEEEEEEHHHCCCCC--ceEEEcc-ccCCCCceeEEEEE
Confidence            9999999999999999999988888999999999988 899999999999998664  4799884 33333445699999


Q ss_pred             EEEEE
Q 006430          176 ELKFT  180 (645)
Q Consensus       176 ~l~f~  180 (645)
                      ++.|.
T Consensus       120 ~~~~i  124 (126)
T d2ep6a1         120 EMDLI  124 (126)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            99886


No 3  
>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]}
Probab=99.77  E-value=1.4e-18  Score=158.50  Aligned_cols=132  Identities=17%  Similarity=0.384  Sum_probs=106.8

Q ss_pred             eEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCe
Q 006430           12 VIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQA   91 (645)
Q Consensus        12 ~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~   91 (645)
                      |..++|.|+|+|++|++|++++....+                               ...++...+.+||||++.++.+
T Consensus         1 ~~~~~G~L~v~I~~A~~L~~~~~~~~~-------------------------------~~~~~~~~~~~DPYv~v~l~~~   49 (136)
T d1gmia_           1 MVVFNGLLKIKICEAVSLKPTAWSLRD-------------------------------AVGPRPQTFLLDPYIALNVDDS   49 (136)
T ss_dssp             CCCEEEEEEEEEEEEESCCCCHHHHCC--------------------------------CCSSCCCCCCCEEEEEEETTE
T ss_pred             CccEEEEEEEEEEEeECCCcccccccc-------------------------------cccccCCCCCcCcEEEEEeCCC
Confidence            356899999999999999986543210                               0001223345899999999998


Q ss_pred             eeeeeccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccCC--ceeEEEEEccCCCCCCCC
Q 006430           92 TVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATG--ELISRWYDIIAPSGSPPK  168 (645)
Q Consensus        92 ~~~kT~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~--~~~~~w~~l~~~~~~~~~  168 (645)
                      ...+|++++++.+|.|||+|.|.+.+ ...|+|+|||++.++ +++||.+.|+|.++...  ...+.||+| .       
T Consensus        50 ~~~~T~~~~~t~~P~Wne~f~f~v~~-~~~l~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~w~~L-~-------  120 (136)
T d1gmia_          50 RIGQTATKQKTNSPAWHDEFVTDVCN-GRKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDL-E-------  120 (136)
T ss_dssp             EEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEEC-B-------
T ss_pred             cCcEeeEEcCCCCccCccEEEEEEec-CCceEEEEEEecCCCCceeEEEEEEEHHHhhhcCCcceeEEEeC-C-------
Confidence            87899999999999999999999975 467999999999987 89999999999998643  456789999 2       


Q ss_pred             CCceEEEEEEEEeCC
Q 006430          169 PGASIQLELKFTPCD  183 (645)
Q Consensus       169 ~~g~l~l~l~f~p~~  183 (645)
                      +.|+|+|.+.+.++.
T Consensus       121 p~G~v~l~v~~~~~~  135 (136)
T d1gmia_         121 PEGKVYVIIDLSGSS  135 (136)
T ss_dssp             SSCEEEEEEEEEEEE
T ss_pred             CCcEEEEEEEEEeCC
Confidence            349999999998864


No 4  
>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.75  E-value=3.1e-18  Score=155.80  Aligned_cols=122  Identities=25%  Similarity=0.500  Sum_probs=103.2

Q ss_pred             ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCeeeee
Q 006430           16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVAR   95 (645)
Q Consensus        16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~~~~k   95 (645)
                      .|.|.|+|++|++|+.++..+.                                          +||||++.++... .+
T Consensus         9 ~G~L~V~v~~a~~L~~~d~~g~------------------------------------------~Dpyv~v~~~~~~-~~   45 (136)
T d1wfja_           9 HGTLEVVLVSAKGLEDADFLNN------------------------------------------MDPYVQLTCRTQD-QK   45 (136)
T ss_dssp             EEEEEEEEEEEEECSSCCSSCS------------------------------------------SCCCEEEESSSCE-EE
T ss_pred             cEEEEEEEEEeeCCCCCCCCCC------------------------------------------CCccEEEEEeeee-EE
Confidence            5899999999999998887665                                          8999999998866 57


Q ss_pred             ecccc-CCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccC-CceeEEEEEccCCCCCCCCCCce
Q 006430           96 TRVLK-NSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIAT-GELISRWYDIIAPSGSPPKPGAS  172 (645)
Q Consensus        96 T~v~~-~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~-~~~~~~w~~l~~~~~~~~~~~g~  172 (645)
                      |++++ ++.||+|||+|.|.+......|.|+|||++.++ +++||.+.|+|.++.. +.....|+++... +   +..|+
T Consensus        46 t~~~~~~~~nP~Wne~f~f~v~~~~~~L~v~V~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~l~~~-~---~~~G~  121 (136)
T d1wfja_          46 SNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKD-E---EYKGE  121 (136)
T ss_dssp             CCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEEET-T---EEEEE
T ss_pred             EEEEecCCCcEEEeeEEEEEEcCccceEEEEEEEecCCCCCCEEEEEEEEhHHhcccCCcCcEEEEecCC-C---ccCEE
Confidence            77776 589999999999999988888999999999987 8999999999998753 4555789998532 2   34699


Q ss_pred             EEEEEEEEeCCC
Q 006430          173 IQLELKFTPCDK  184 (645)
Q Consensus       173 l~l~l~f~p~~~  184 (645)
                      |+|++.|.|...
T Consensus       122 i~l~l~~~p~~p  133 (136)
T d1wfja_         122 IWVALSFKPSGP  133 (136)
T ss_dssp             EEEEEEEEECCS
T ss_pred             EEEEEEEEeCCC
Confidence            999999998543


No 5  
>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73  E-value=8.4e-18  Score=150.70  Aligned_cols=120  Identities=23%  Similarity=0.396  Sum_probs=99.0

Q ss_pred             eEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC--eeee
Q 006430           17 GDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ--ATVA   94 (645)
Q Consensus        17 g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~--~~~~   94 (645)
                      +.|.|+|++|++|+......     +                                  .+.+||||++.+++  ....
T Consensus         3 ~~l~V~v~~a~~L~~~~~~d-----~----------------------------------~~~~Dpyv~v~l~~~~~~~~   43 (126)
T d1rlwa_           3 HKFTVVVLRATKVTKGAFGD-----M----------------------------------LDTPDPYVELFISTTPDSRK   43 (126)
T ss_dssp             EEEEEEEEEEESCCSCHHHH-----H----------------------------------HCCCCEEEEEECTTSTTCCE
T ss_pred             cEEEEEEEEccCCCCccccc-----c----------------------------------CCCCCcEEEEEECCccccee
Confidence            67999999999998642210     0                                  01389999999965  3457


Q ss_pred             eeccccCCCCCeeeeEEEEeecCCC-CeEEEEEEEcCCCCCeeeeeEeeccccccCCceeEEEEEccCCCCCCCCCCceE
Q 006430           95 RTRVLKNSQEPVWNEHFNIPLAHPL-SNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASI  173 (645)
Q Consensus        95 kT~v~~~t~~P~w~e~f~~~~~~~~-~~l~i~v~d~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~~~~~~~g~l  173 (645)
                      ||++++++.||.|||+|.|.+.... ..|.|+|||++..++++||++.++|.++..+...+.||+| .+.     ..|+|
T Consensus        44 ~T~~~~~t~nP~wne~f~f~i~~~~~~~L~v~V~d~d~~~d~~lG~~~i~L~~l~~~~~~~~~~~L-~~~-----~~g~i  117 (126)
T d1rlwa_          44 RTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIF-NQV-----TEMVL  117 (126)
T ss_dssp             ECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSSCCEEEEEEEEEGGGSCTTCEEEEEEEE-TTT-----EEEEE
T ss_pred             EeeecCCCccceeceeeeecccCcccCcEEEEEEECCCCCCCeEEEEEEEHHHccCCCeEEEEEEc-cCC-----CeEEE
Confidence            9999999999999999999997764 4689999999988899999999999999989889999999 333     23888


Q ss_pred             EEEEEEEe
Q 006430          174 QLELKFTP  181 (645)
Q Consensus       174 ~l~l~f~p  181 (645)
                      ++++.+.|
T Consensus       118 ~~~l~~~~  125 (126)
T d1rlwa_         118 EMSLEVAS  125 (126)
T ss_dssp             EEEEECCC
T ss_pred             EEEEEEEe
Confidence            88888776


No 6  
>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.68  E-value=1.4e-16  Score=144.01  Aligned_cols=107  Identities=22%  Similarity=0.390  Sum_probs=91.4

Q ss_pred             eEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC--
Q 006430           12 VIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--   89 (645)
Q Consensus        12 ~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~--   89 (645)
                      +.+..+.|.|+|++|++|+.++..+.                                          +||||++.+.  
T Consensus        10 ~~~~~~~L~V~V~~a~~L~~~d~~g~------------------------------------------~DpYv~v~l~~~   47 (132)
T d1a25a_          10 AHIDREVLIVVVRDAKNLVPMDPNGL------------------------------------------SDPYVKLKLIPD   47 (132)
T ss_dssp             EEESSSEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEESC
T ss_pred             EEecCCEEEEEEEeeeCCCCCCCCCC------------------------------------------cCeEEEEEEccC
Confidence            46677899999999999998876654                                          8999999982  


Q ss_pred             --CeeeeeeccccCCCCCeeeeEEEEeecCC--CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccC
Q 006430           90 --QATVARTRVLKNSQEPVWNEHFNIPLAHP--LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIA  161 (645)
Q Consensus        90 --~~~~~kT~v~~~t~~P~w~e~f~~~~~~~--~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~  161 (645)
                        ...+.+|++++++.||+|||+|.|.+...  ...|.|+|||.+.++ +++||.+.|++.++..+ ..++||+|.+
T Consensus        48 ~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~-~~~~W~~L~~  123 (132)
T d1a25a_          48 PKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLS  123 (132)
T ss_dssp             TTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred             CCCccccEEeeecCCCCCccceEEEEEeEccccCCEEeEEEEecCCCCCCcEeEEEEEeHHHcCCC-CCCeEEECCC
Confidence              24457999999999999999999998764  346899999999987 89999999999998754 4689999964


No 7  
>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66  E-value=2.6e-16  Score=142.60  Aligned_cols=122  Identities=18%  Similarity=0.283  Sum_probs=96.8

Q ss_pred             EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCeeee
Q 006430           15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVA   94 (645)
Q Consensus        15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~~~~   94 (645)
                      |.+.|.|+|++|++++..+..+.                                          +||||++.++++. .
T Consensus         4 ~~~~L~v~v~~A~~~~~~~~~~~------------------------------------------~dpyv~v~~~~~~-~   40 (133)
T d2nq3a1           4 MKSQLQITVISAKLKENKKNWFG------------------------------------------PSPYVEVTVDGQS-K   40 (133)
T ss_dssp             CCEEEEEEEEEEEECCCC--CCC------------------------------------------CCEEEEEEETTEE-E
T ss_pred             cceEEEEEEEEeECCCcCCCCCC------------------------------------------cCeEEEEEECCeE-E
Confidence            56889999999999987665554                                          8999999999876 6


Q ss_pred             eeccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCC-CeeeeeEeeccccccC---Cc--eeEEEEEccCCCCCCCC
Q 006430           95 RTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFG-AQIIGTAAIPAHTIAT---GE--LISRWYDIIAPSGSPPK  168 (645)
Q Consensus        95 kT~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~---~~--~~~~w~~l~~~~~~~~~  168 (645)
                      +|++++++.||.|||.|.|.+.+ ...|.|+|||++.++ +++||++.++|.++..   +.  ....|+.+.. ..++..
T Consensus        41 kT~v~~~t~nP~wne~f~f~~~~-~~~l~~~V~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~~~l~l~~-~~~~~~  118 (133)
T d2nq3a1          41 KTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGG-DKEPTE  118 (133)
T ss_dssp             ECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEE-SSCTTS
T ss_pred             eeEEEEecccEEEcceEEEEEEe-cceeEEEEEEccCCCCCceEEEEEEEHHHhhhhcCCceeeEEEEEecCC-CCCCce
Confidence            99999999999999999999975 568999999999998 8999999999998742   22  2334555532 334445


Q ss_pred             CCceEEEEEEEEe
Q 006430          169 PGASIQLELKFTP  181 (645)
Q Consensus       169 ~~g~l~l~l~f~p  181 (645)
                      ..|+|.|.+.+..
T Consensus       119 ~~G~L~v~l~~~~  131 (133)
T d2nq3a1         119 TIGDLSICLDGLQ  131 (133)
T ss_dssp             EEEEEEEEEESEE
T ss_pred             EEEEEEEEEeeEE
Confidence            6699988887654


No 8  
>d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.66  E-value=8.1e-16  Score=138.39  Aligned_cols=116  Identities=22%  Similarity=0.342  Sum_probs=94.3

Q ss_pred             eEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECCeeeeee
Q 006430           17 GDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVART   96 (645)
Q Consensus        17 g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~~~~~kT   96 (645)
                      +.|+|+|.+|++|++++   .                                          +||||++.+++.+ .+|
T Consensus         2 ~~L~V~v~~a~~l~~~~---~------------------------------------------~dpYv~l~~~~~k-~~T   35 (128)
T d2cjta1           2 SLLCVGVKKAKFDGAQE---K------------------------------------------FNTYVTLKVQNVK-STT   35 (128)
T ss_dssp             EEEEEEEEEEECSSCGG---G------------------------------------------CEEEEEEEETTEE-EEC
T ss_pred             eEEEEEEEEEECCCCCC---C------------------------------------------cCeEEEEEeCCEE-EEE
Confidence            57999999999998633   1                                          8999999999865 689


Q ss_pred             ccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCCCeeeeeEeeccccccCC--ceeEEEEEccCCC--------CCC
Q 006430           97 RVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATG--ELISRWYDIIAPS--------GSP  166 (645)
Q Consensus        97 ~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~~~--~~~~~w~~l~~~~--------~~~  166 (645)
                      ++++++ ||+|||+|.|.+..+...|.|+|||++..++++||++.|+|+++..+  .....||+|..+.        |..
T Consensus        36 ~~~k~~-nP~Wne~f~f~v~~~~~~L~v~V~d~~~~~d~~lG~~~I~L~~l~~~~~~~~~~W~~L~~~~~~~~gei~gt~  114 (128)
T d2cjta1          36 IAVRGS-QPSWEQDFMFEINRLDLGLTVEVWNKGLIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTK  114 (128)
T ss_dssp             CCEESS-SCEEEEEEEEEECCCSSEEEEEEEECCSSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCS
T ss_pred             EEecCC-CCeEEEEEEEeeccccceEEEEEEeCCCcCCcceEEEEEEehhhccCCCCCCCeeEECCccccCCCCEEEeee
Confidence            888755 99999999999999888999999999988899999999999998633  3456899995322        223


Q ss_pred             CCCCceEEEEEEE
Q 006430          167 PKPGASIQLELKF  179 (645)
Q Consensus       167 ~~~~g~l~l~l~f  179 (645)
                      .....+|+++++|
T Consensus       115 ~~~~~~~ll~~~~  127 (128)
T d2cjta1         115 DPTFHRILLDAHF  127 (128)
T ss_dssp             CCCCCEEEEEEEE
T ss_pred             cCCCcEEEEEEEc
Confidence            3445678888877


No 9  
>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.65  E-value=1.5e-16  Score=145.28  Aligned_cols=117  Identities=26%  Similarity=0.372  Sum_probs=95.5

Q ss_pred             CCCCCCce--eEEEceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCC
Q 006430            4 GDDSDKEK--VIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSD   81 (645)
Q Consensus         4 ~~~~~~~~--~~~~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   81 (645)
                      ....+++.  +.|-.|.|.|+|++|++|+.++..+.                                          +|
T Consensus         3 ~p~~G~l~lsl~y~~~~L~V~V~~A~~L~~~d~~g~------------------------------------------~D   40 (142)
T d1rh8a_           3 HPITGEIQLQINYDLGNLIIHILQARNLVPRDNNGY------------------------------------------SD   40 (142)
T ss_dssp             CCCCCEEEEEEEEETTEEEEEEEEEESCCCCSSSSC------------------------------------------SC
T ss_pred             CCcceEEEEEEEEeCCEEEEEEEEeECCCCcCCCCC------------------------------------------CC
Confidence            33444444  46678999999999999998776654                                          89


Q ss_pred             cEEEEEECC-------------eeeeeeccccCCCCCeeeeEEEEeecC----CCCeEEEEEEEcCCCC-CeeeeeEeec
Q 006430           82 PYVTVVVPQ-------------ATVARTRVLKNSQEPVWNEHFNIPLAH----PLSNLEIQVKDDDVFG-AQIIGTAAIP  143 (645)
Q Consensus        82 pyv~v~l~~-------------~~~~kT~v~~~t~~P~w~e~f~~~~~~----~~~~l~i~v~d~~~~~-~~~iG~~~i~  143 (645)
                      |||++.+..             ..+.||++++++.||.|||+|.|.+..    ....|.|+|||++.++ +++||++.|+
T Consensus        41 pyV~v~l~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~~~~~~~lG~~~i~  120 (142)
T d1rh8a_          41 PFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLID  120 (142)
T ss_dssp             CEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEE
T ss_pred             cCEEEEEecCcccccccccCCCceeeeccCCcCCCCceeEEEEEEeeecccccCCCEEEEEEEEecCCCCCeeeEEEEEE
Confidence            999999832             122589999999999999999998443    2557999999999887 8999999999


Q ss_pred             cccccCCceeEEEEEccCC
Q 006430          144 AHTIATGELISRWYDIIAP  162 (645)
Q Consensus       144 l~~l~~~~~~~~w~~l~~~  162 (645)
                      |.++..+....+||+|...
T Consensus       121 L~~l~~~~~~~~W~~L~~~  139 (142)
T d1rh8a_         121 LSSTSHLDNTPRWYPLKEQ  139 (142)
T ss_dssp             TTSCGGGTTCCEEEECBCC
T ss_pred             hHHcCCCCCceEEEECcCc
Confidence            9999888888899999543


No 10 
>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.63  E-value=7.9e-16  Score=140.96  Aligned_cols=104  Identities=33%  Similarity=0.537  Sum_probs=90.1

Q ss_pred             EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC--Cee
Q 006430           15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--QAT   92 (645)
Q Consensus        15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~--~~~   92 (645)
                      ..+.|.|+|++|++|+.++..+.                                          +||||++.+.  ...
T Consensus        32 ~~~~L~V~V~~a~~L~~~~~~g~------------------------------------------~dpyV~v~l~~~~~~   69 (143)
T d1rsya_          32 QNNQLLVGIIQAAELPALDMGGT------------------------------------------SDPYVKVFLLPDKKK   69 (143)
T ss_dssp             TTTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEETTCCS
T ss_pred             CCCEEEEEEEEccCCCCCCCCCC------------------------------------------CCeEEEEEEcCCCCe
Confidence            35689999999999998776554                                          8999999983  344


Q ss_pred             eeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEcc
Q 006430           93 VARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDII  160 (645)
Q Consensus        93 ~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~  160 (645)
                      ..+|++++++.||+|||+|.|.+...   ...|.|+|||.+.++ +++||.+.|+|.++..+....+||+|.
T Consensus        70 ~~kT~~~~~t~~P~wne~f~f~i~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~L~~~~~~~~~~~W~~L~  141 (143)
T d1rsya_          70 KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ  141 (143)
T ss_dssp             CEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred             eEEEEEeccccCcceeeeeEEEEEeeccCCceEEEEEEEcCCCCCCcEEEEEEEEchhccCCCCCccEEeCC
Confidence            57999999999999999999997653   467999999999987 889999999999999888889999993


No 11 
>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.63  E-value=1.8e-15  Score=136.49  Aligned_cols=121  Identities=23%  Similarity=0.449  Sum_probs=93.2

Q ss_pred             ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC----Ce
Q 006430           16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP----QA   91 (645)
Q Consensus        16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~----~~   91 (645)
                      ...|.|+|++|++|+.++....                                        +.+||||++.+.    ..
T Consensus         3 p~~l~V~Vi~a~~L~~~~~~~~----------------------------------------~~~DPyV~v~l~g~~~~~   42 (131)
T d1qasa2           3 PERLRVRIISGQQLPKVNKNKN----------------------------------------SIVDPKVIVEIHGVGRDT   42 (131)
T ss_dssp             CEEEEEEEEEEESCCCCC---------------------------------------------CCCEEEEEEEESSTTTC
T ss_pred             cEEEEEEEEEeeCCCCCCCCCC----------------------------------------CCcCeEEEEEEccCCCCc
Confidence            3579999999999986543221                                        128999999983    24


Q ss_pred             eeeeeccccC-CCCCeeeeEEEEeecCCC-CeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCCCCCCCC
Q 006430           92 TVARTRVLKN-SQEPVWNEHFNIPLAHPL-SNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPK  168 (645)
Q Consensus        92 ~~~kT~v~~~-t~~P~w~e~f~~~~~~~~-~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~~~~~  168 (645)
                      ...+|+++++ +.||.|||+|.|.+..+. ..|.|+|||++.++ +++||++.|+|+++..|   ..|++|.+..|++. 
T Consensus        43 ~~~~T~~v~~~~~nP~wne~f~f~~~~~~~~~L~~~V~D~d~~~~d~~iG~~~i~l~~l~~g---~~~~~L~~~~g~~~-  118 (131)
T d1qasa2          43 GSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQG---YRHVHLLSKNGDQH-  118 (131)
T ss_dssp             EEEECCCCSSCSSSCEEEEEEEEEESCGGGCEEEEEEEECCTTTCCEEEEEEEEEGGGBCCE---EEEEEEECTTSCEE-
T ss_pred             EEEEEEEEecccCCceEEEEEEEEEEcchhceEEEEEEEecCCCCCcEEEEEEEEEeccCCC---CEEEECCCCCcCCC-
Confidence            5578998766 579999999999987653 45899999999998 89999999999999865   46999988777643 


Q ss_pred             CCceEEEEEEEE
Q 006430          169 PGASIQLELKFT  180 (645)
Q Consensus       169 ~~g~l~l~l~f~  180 (645)
                      ..++|.+++.+.
T Consensus       119 ~~~~L~v~i~~~  130 (131)
T d1qasa2         119 PSATLFVKISIQ  130 (131)
T ss_dssp             EEEEEEEEEEEE
T ss_pred             CCCEEEEEEEEE
Confidence            246777777653


No 12 
>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.57  E-value=3.9e-15  Score=134.02  Aligned_cols=104  Identities=27%  Similarity=0.404  Sum_probs=84.7

Q ss_pred             EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC--ee
Q 006430           15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ--AT   92 (645)
Q Consensus        15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~--~~   92 (645)
                      -.+.|.|+|++|++|+.++..+.                                          +||||++.+.+  ..
T Consensus        16 ~~~~L~V~V~~a~~L~~~~~~g~------------------------------------------~dpyv~v~l~~~~~~   53 (130)
T d1dqva1          16 GSDQLVVRILQALDLPAKDSNGF------------------------------------------SDPYVKIYLLPDRKK   53 (130)
T ss_dssp             SSCEEEEEEEEEECCCCCSTTSC------------------------------------------CCEEEEEECTTSTTS
T ss_pred             CCCEEEEEEEeeeCCccccCCCC------------------------------------------cceEEEEEEccCCCc
Confidence            45789999999999998776554                                          89999999843  44


Q ss_pred             eeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccc-c-CCceeEEEEEcc
Q 006430           93 VARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTI-A-TGELISRWYDII  160 (645)
Q Consensus        93 ~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l-~-~~~~~~~w~~l~  160 (645)
                      ..+|++++++.||+|||+|.|.+...   ...|.|+|||.+.++ +++||++.|++... . .......|++|+
T Consensus        54 ~~kT~v~~~t~~P~wne~f~f~v~~~~~~~~~L~v~V~d~~~~~~d~~iG~~~i~~~~~l~~~~~~~~~W~~L~  127 (130)
T d1dqva1          54 KFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDIL  127 (130)
T ss_dssp             CEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECB
T ss_pred             eEeceeEcCCCCeeeeeEEEEEEchHHcCCCeEEEEEEEcCCCCCCceEEEEEECchhhhhcCCCCCcEEEecc
Confidence            57999999999999999999998654   456899999999887 89999999986433 2 233445699995


No 13 
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]}
Probab=99.54  E-value=1.4e-14  Score=133.40  Aligned_cols=134  Identities=16%  Similarity=0.237  Sum_probs=100.2

Q ss_pred             chHHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccCccCCC
Q 006430          242 TCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPG  321 (645)
Q Consensus       242 ~~f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~~~~~~  321 (645)
                      ...+.++++|++|+++|+|+.|.|++                 ..|.++|++|++|||+||||+ |..+.....      
T Consensus        13 ~~~~~i~~~I~~A~~~I~I~~~~~~~-----------------~~i~~aL~~a~~rGV~Vril~-~~~~~~~~~------   68 (152)
T d1byra_          13 SARVLVLSAIDSAKTSIRMMAYSFTA-----------------PDIMKALVAAKKRGVDVKIVI-DERGNTGRA------   68 (152)
T ss_dssp             HHHHHHHHHHHHCSSEEEEEESSBCC-----------------HHHHHHHHHHHHTTCEEEEEE-ESTTCCSHH------
T ss_pred             cHHHHHHHHHHhCCcEEEEEEEeecC-----------------HHHHHHHHHHHhcCCeEEEEE-Eeecccchh------
Confidence            46788999999999999999998753                 479999999999999999996 877543210      


Q ss_pred             ccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecceeeccceEEEeccCCCCCCcceEEEEccccCCCCCCCCC
Q 006430          322 VMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTP  401 (645)
Q Consensus       322 ~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~~~vafvGG~ni~~~r~d~~  401 (645)
                           .......+...++.+....                ....+|.|++|||++        ++|+|+.|++...+.  
T Consensus        69 -----~~~~~~~~~~~~~~~~~~~----------------~~~~~H~K~~ivD~~--------~~~~GS~N~t~~~~~--  117 (152)
T d1byra_          69 -----SIAAMNYIANSGIPLRTDS----------------NFPIQHDKVIIVDNV--------TVETGSFNFTKAAET--  117 (152)
T ss_dssp             -----HHHHHHHHHHTTCCEEEEC----------------SSSCCCCCEEEETTT--------EEEEESCCBSHHHHH--
T ss_pred             -----hHHHHHHhhhccccccccc----------------cccccccceEEecCc--------eeEecccCCChHHHh--
Confidence                 1222334445566655311                123579999999998        999999999884332  


Q ss_pred             CcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeC--hHHHHHHHHHHHHHhhhc
Q 006430          402 EHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDG--PAAYDVLINFEQRWRKAT  460 (645)
Q Consensus       402 ~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~G--pav~dl~~~F~~rWn~~~  460 (645)
                                                    ..++..+.+++  ++++.+...|.+.|+.+.
T Consensus       118 ------------------------------~n~e~~~~i~~~~~v~~~~~~~F~~~w~~~~  148 (152)
T d1byra_         118 ------------------------------KNSENAVVIWNMPKLAESFLEHWQDRWNQGR  148 (152)
T ss_dssp             ------------------------------TSCEEEEEEESCHHHHHHHHHHHHHHHHTCE
T ss_pred             ------------------------------cCCcceEEEEcCHHHHHHHHHHHHHHHhhCC
Confidence                                          12477888876  478999999999998753


No 14 
>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52  E-value=2.7e-14  Score=127.39  Aligned_cols=101  Identities=25%  Similarity=0.437  Sum_probs=80.0

Q ss_pred             ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC----Ce
Q 006430           16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP----QA   91 (645)
Q Consensus        16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~----~~   91 (645)
                      .+.|.|+|++|+||+.++..+.                                          +||||++.+.    ..
T Consensus        13 ~~~L~V~V~~a~~L~~~~~~~~------------------------------------------~dpyVkv~l~~~~~~~   50 (125)
T d2bwqa1          13 GHQLIVTILGAKDLPSREDGRP------------------------------------------RNPYVKIYFLPDRSDK   50 (125)
T ss_dssp             TTEEEEEEEEEESCCCCTTSCC------------------------------------------BCEEEEEEEESSCSGG
T ss_pred             CCEEEEEEEEeECCCCcCCCCC------------------------------------------CCEEEEEEEeCCCCCc
Confidence            5789999999999997665443                                          8999999982    24


Q ss_pred             eeeeeccccCCCCCeeeeEEEEe-ecCC---CCeEEEEEEEcCCCC---CeeeeeEeeccccccCCceeEEEEEc
Q 006430           92 TVARTRVLKNSQEPVWNEHFNIP-LAHP---LSNLEIQVKDDDVFG---AQIIGTAAIPAHTIATGELISRWYDI  159 (645)
Q Consensus        92 ~~~kT~v~~~t~~P~w~e~f~~~-~~~~---~~~l~i~v~d~~~~~---~~~iG~~~i~l~~l~~~~~~~~w~~l  159 (645)
                      ...||++++++.+|.|||+|.|. +...   ...|.|+|||.+.+.   +++||++.|+|.++.... ..+||+|
T Consensus        51 ~~~kT~~~~~t~~P~wne~f~f~~~~~~~l~~~~L~i~v~d~~~~~~~~~~~iG~~~i~l~~~~~~~-~~~Wy~L  124 (125)
T d2bwqa1          51 NKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKL  124 (125)
T ss_dssp             GEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred             cccccCEEcCCCCCEEccEEEEeeeChhhcCCCEEEEEEEECCCCCCCCCeeEEEEEEEchhcCCCC-CCEEEeC
Confidence            45799999999999999999997 4432   346899999998763   569999999999988554 4689998


No 15 
>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.52  E-value=4.2e-14  Score=128.44  Aligned_cols=90  Identities=28%  Similarity=0.414  Sum_probs=72.3

Q ss_pred             ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEE--CC--e
Q 006430           16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVV--PQ--A   91 (645)
Q Consensus        16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l--~~--~   91 (645)
                      .+.|.|+|++|++|+.++..+.                                          +||||++.+  +.  .
T Consensus        14 ~~~L~V~v~~a~~L~~~~~~~~------------------------------------------~dpyvkv~l~~~~~~~   51 (138)
T d1w15a_          14 TNTLTVVVLKARHLPKSDVSGL------------------------------------------SDPYVKVNLYHAKKRI   51 (138)
T ss_dssp             TTEEEEEEEEEESCC------C------------------------------------------CCEEEEEEEEETTEEE
T ss_pred             CCEEEEEEEEeECCCCCCCCCC------------------------------------------cCEEEEEEEeCCcccC
Confidence            5789999999999998776554                                          899999998  32  3


Q ss_pred             eeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccc
Q 006430           92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTI  147 (645)
Q Consensus        92 ~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l  147 (645)
                      .+.||++++++.||.|||+|.|.+...   ...|.|+|||.+.++ +++||++.|++...
T Consensus        52 ~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~i~v~d~~~~~~~~~iG~~~i~l~~~  111 (138)
T d1w15a_          52 SKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAE  111 (138)
T ss_dssp             EEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTCC
T ss_pred             ccccceeECCCCCCeECcEEEEEecHHHhCccEEEEEEEeCCCCCCCCEEEEEEEcchhC
Confidence            456899999999999999999998664   345899999999887 89999999998753


No 16 
>d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52  E-value=5.2e-14  Score=127.88  Aligned_cols=101  Identities=19%  Similarity=0.280  Sum_probs=86.3

Q ss_pred             EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC---e
Q 006430           15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ---A   91 (645)
Q Consensus        15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~---~   91 (645)
                      -.+.|.|+|++|++|+.   .+                                          .+||||++.+.+   .
T Consensus        24 ~~~~L~V~v~~a~~L~~---~g------------------------------------------~~dpyVkv~l~~~~~~   58 (138)
T d1wfma_          24 QKAELFVTRLEAVTSNH---DG------------------------------------------GCDCYVQGSVANRTGS   58 (138)
T ss_dssp             TTTEEEEEEEEEECCCC---SS------------------------------------------CCCEEEEEEEEETTEE
T ss_pred             CCCEEEEEEEEcCCCCC---CC------------------------------------------CcCcEEEEEECCCCCc
Confidence            36789999999999953   12                                          289999999843   3


Q ss_pred             eeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEcc
Q 006430           92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDII  160 (645)
Q Consensus        92 ~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~  160 (645)
                      ...+|++++++.+|+|||+|.|.+...   ...|.|+|||.+.++ +++||++.|+|.++..+...+.|++|.
T Consensus        59 ~~~kT~v~~~~~~P~wne~f~f~v~~~~l~~~~L~~~V~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~W~~L~  131 (138)
T d1wfma_          59 VEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELK  131 (138)
T ss_dssp             EEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECC
T ss_pred             cceeeeEECCCCCceEeeeEEEEeeehhccceEEEEEEeeecccccceeeeEEEEEhHHccCCCCceEeEeCC
Confidence            457899999999999999999998764   456999999999988 899999999999998777889999994


No 17 
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.50  E-value=9.2e-15  Score=132.36  Aligned_cols=106  Identities=27%  Similarity=0.449  Sum_probs=84.9

Q ss_pred             EceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC----C
Q 006430           15 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP----Q   90 (645)
Q Consensus        15 ~~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~----~   90 (645)
                      ..+.|.|.|++|+||+.++..+.                                          +||||++.+.    .
T Consensus        13 ~~~~L~V~v~~a~nL~~~~~~~~------------------------------------------~dpyv~v~l~~~~~~   50 (137)
T d2cm5a1          13 QQGGLIVGIIRCVHLAAMDANGY------------------------------------------SDPFVKLWLKPDMGK   50 (137)
T ss_dssp             TTTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEETC---
T ss_pred             CCCEEEEEEEEEECCCCCCCCCC------------------------------------------cCeEEEEEEEcCCcc
Confidence            46789999999999998765553                                          8999999982    2


Q ss_pred             eeeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCCCC
Q 006430           91 ATVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSG  164 (645)
Q Consensus        91 ~~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~  164 (645)
                      ..+.||++++++.+|+|||+|.|.+...   ...|.|.||+.+.++ +++||++.+++..+.  ...++|++|+...+
T Consensus        51 ~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~v~v~~~~~~~~~~~iG~~~i~l~~~~--~~~~~W~~l~~~~~  126 (137)
T d2cm5a1          51 KAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG--ERLKHWYECLKNKD  126 (137)
T ss_dssp             CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH--HHHHHHHHHHHCTT
T ss_pred             ceeecCEeEcCCCCCccceEEEEEeEHHHccccEEEEEeeeCCCCCCCCEEEEEEeCccccC--cchhhhhhHhhCCC
Confidence            4457999999999999999999998754   356899999999887 899999999997653  23456777655443


No 18 
>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49  E-value=1.6e-13  Score=124.62  Aligned_cols=105  Identities=30%  Similarity=0.438  Sum_probs=84.1

Q ss_pred             ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEEC--Ceee
Q 006430           16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVP--QATV   93 (645)
Q Consensus        16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~--~~~~   93 (645)
                      .+.|.|+|++|++|+.++..+.                                         .+||||++.+.  ....
T Consensus        21 ~~~L~V~V~~a~~L~~~d~~~~-----------------------------------------~~dpyV~v~l~~~~~~~   59 (138)
T d1ugka_          21 RKAFVVNIKEARGLPAMDEQSM-----------------------------------------TSDPYIKMTILPEKKHK   59 (138)
T ss_dssp             GTEEEEEEEEEESCCCCBTTTT-----------------------------------------BCEEEEEEEEETTTCSE
T ss_pred             CCEEEEEEEEecCCCCCCCCCC-----------------------------------------ccceEEEEEEcCCCCEe
Confidence            4679999999999998765442                                         27999999983  3445


Q ss_pred             eeeccccCCCCCeeeeEEEEe-ecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccC-CceeEEEEEccC
Q 006430           94 ARTRVLKNSQEPVWNEHFNIP-LAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIAT-GELISRWYDIIA  161 (645)
Q Consensus        94 ~kT~v~~~t~~P~w~e~f~~~-~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~-~~~~~~w~~l~~  161 (645)
                      .||++++++.||.|||+|.|. +...   ...|.|+|||.+.++ +++||++.|+|.++.. ......|..++.
T Consensus        60 ~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~L~~~~~~~~~~~~~~~~~~  133 (138)
T d1ugka_          60 VKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS  133 (138)
T ss_dssp             EECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred             EeCeeEeCCCCCceeeEEEEeeeCHHHcccceEEEEEEECCCCCCCcEEEEEEEEcccccCCCCeEEEEeeccC
Confidence            799999999999999999997 4432   346899999999987 8999999999999863 344556777643


No 19 
>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.46  E-value=1.8e-13  Score=126.95  Aligned_cols=102  Identities=27%  Similarity=0.466  Sum_probs=84.2

Q ss_pred             ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----e
Q 006430           16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ----A   91 (645)
Q Consensus        16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~----~   91 (645)
                      .+.|.|+|++|++|+..+..+.                                          +||||++.+..    .
T Consensus        24 ~~~L~V~V~~a~~L~~~~~~~~------------------------------------------~dpyV~v~l~~~~~~~   61 (157)
T d1uowa_          24 AGKLTVVILEAKNLKKMDVGGL------------------------------------------SDPYVKIHLMQNGKRL   61 (157)
T ss_dssp             TTEEEEEEEEEESCCCCSTTSC------------------------------------------CCEEEEEEEEETTEEE
T ss_pred             CCEEEEEEEEEEEcccccCCCC------------------------------------------CCeeEEEEEecCCccc
Confidence            4789999999999998765554                                          89999999842    2


Q ss_pred             eeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeecccccc------------CCceeEE
Q 006430           92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIA------------TGELISR  155 (645)
Q Consensus        92 ~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~------------~~~~~~~  155 (645)
                      ...+|++++++.||+|||+|.|.+...   ...|.|+|||.+.++ +++||++.|++....            .+.....
T Consensus        62 ~~~kT~v~~~t~nP~wne~f~F~v~~~~l~~~~l~i~v~d~~~~~~~~~iG~~~i~l~~~~~~~~hW~~~~~~~~~~v~~  141 (157)
T d1uowa_          62 KKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQ  141 (157)
T ss_dssp             EEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEE
T ss_pred             cceecccccCCCCcccCCeEEEEecHHHcCccEEEEEEcccCCCCCCceeEEEEEecccCChhHHHHHHHHhCCCCceeE
Confidence            345899999999999999999998764   346899999999998 899999999986531            2345678


Q ss_pred             EEEc
Q 006430          156 WYDI  159 (645)
Q Consensus       156 w~~l  159 (645)
                      |++|
T Consensus       142 Wh~L  145 (157)
T d1uowa_         142 WHTL  145 (157)
T ss_dssp             EEEC
T ss_pred             eEeC
Confidence            9988


No 20 
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.45  E-value=2.3e-13  Score=121.22  Aligned_cols=91  Identities=14%  Similarity=0.284  Sum_probs=76.6

Q ss_pred             CCCcEEEEEECC----eeeeeeccccCCCCCeeeeEEEEeecCCCCeEEEEEEEcCCCCCeeeeeEeecccccc-----C
Q 006430           79 TSDPYVTVVVPQ----ATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIA-----T  149 (645)
Q Consensus        79 ~~dpyv~v~l~~----~~~~kT~v~~~t~~P~w~e~f~~~~~~~~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~-----~  149 (645)
                      ++||||+|.+.+    .+..+|+++++|+||+|||+|.|.+.. ...|.|.|||++   ++++|.+.+++..+.     .
T Consensus        23 ~~dPY~~v~l~~~~~~~~~~~t~~~kkT~nP~WnE~F~~~v~~-~~~l~i~V~d~d---d~~~g~~~i~l~~l~~~~~~~   98 (123)
T d1bdya_          23 ASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAA---EDPMSEVTVGVSVLAERCKKN   98 (123)
T ss_dssp             SCCCEEEEEEEEECCGGGTTBEEECSCCBCCCTTCEEEEECCT-TCEEEEEEEEET---TEEEEEEEEEHHHHHHHHHTT
T ss_pred             CCCCEEEEEEcCccccccceEEEEeCCCCCcccceEEEEEEcc-ccEEEEEEEEcc---ccccCccEEehhheeeccccC
Confidence            399999999954    234578999999999999999999975 467999999976   789999999988875     3


Q ss_pred             CceeEEEEEccCCCCCCCCCCceEEEEEEEEe
Q 006430          150 GELISRWYDIIAPSGSPPKPGASIQLELKFTP  181 (645)
Q Consensus       150 ~~~~~~w~~l~~~~~~~~~~~g~l~l~l~f~p  181 (645)
                      +...+.|++| .       +.|+|+|+++|..
T Consensus        99 ~~~~~~W~~L-~-------~~Gkl~l~v~~f~  122 (123)
T d1bdya_          99 NGKAEFWLDL-Q-------PQAKVLMCVQYFL  122 (123)
T ss_dssp             TTEEEEEEEC-B-------SSCEEEEEEEEEE
T ss_pred             CCcccEEEeC-C-------CCEEEEEEEEEec
Confidence            6677899999 2       4599999999875


No 21 
>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]}
Probab=99.43  E-value=4.4e-13  Score=133.61  Aligned_cols=161  Identities=20%  Similarity=0.293  Sum_probs=98.3

Q ss_pred             HHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccCccCCCcc
Q 006430          244 WEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVM  323 (645)
Q Consensus       244 f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~~~~~~~~  323 (645)
                      -..+.++|++|+++|+|+.+.|.++..       +... -+..|.++|.+|++|||+||||+ |..++............
T Consensus        56 e~a~~~lI~~A~~~I~I~~q~~~~~~~-------p~~~-~~~~l~~AL~~aa~RGV~Vrvll-~~~~~~~~~~~~~~~~~  126 (246)
T d1v0wa2          56 ESALRALVASAKGHIEISQQDLNATCP-------PLPR-YDIRLYDALAAKMAAGVKVRIVV-SDPANRGAVGSGGYSQI  126 (246)
T ss_dssp             HHHHHHHHHTCSSEEEEEESCSSCCTT-------TSCS-CCHHHHHHHHHHHHTTCEEEEEE-CCGGGCC------CCCC
T ss_pred             HHHHHHHHHhcCcEEEEEEEeecccCC-------cccc-ccHHHHHHHHHHHHcCCcEEEEE-ecCCcccccccchHHHH
Confidence            457899999999999999888765311       0000 02679999999999999999997 87654322111111111


Q ss_pred             ccCh---HHHHhhh-------------cCCCceEEeccCCCCCCccceeeeeecceeeccceEEEeccCCCCCCcceEEE
Q 006430          324 ATHD---EETKKFF-------------KHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAF  387 (645)
Q Consensus       324 ~~~~---~~~~~~l-------------~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~~~vaf  387 (645)
                      ....   .+...++             ...+..+.+.-....  ..+    ......++|.|++|||++        ++|
T Consensus       127 ~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~lH~K~~VVD~~--------~~~  192 (246)
T d1v0wa2         127 KSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSSPN--GKW----ADGHPYAQHHKLVSVDSS--------TFY  192 (246)
T ss_dssp             SCTHHHHHHHHHHHHHHHTSHHHHHHHHHHHEEEEECCSSSS--SSC----TTSCCCCBCCEEEEETTT--------EEE
T ss_pred             HHHHHhcchhhhccccccchhhhhccccccccceeeeecccC--ccc----cCCcccccceeEEEEcCC--------EEE
Confidence            1100   1111111             012233332101000  001    112345789999999999        999


Q ss_pred             EccccCCCCCCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeChHHH-HHHH-HHHHHHhhhccc
Q 006430          388 IGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAY-DVLI-NFEQRWRKATKL  462 (645)
Q Consensus       388 vGG~ni~~~r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gpav~-dl~~-~F~~rWn~~~~~  462 (645)
                      |||.|+.. +|                                  |+|..+.|+||.+. ++.. .|...|..+...
T Consensus       193 VGS~Nl~p-~~----------------------------------~~E~g~vi~~p~~a~~l~~~~~~~~W~~s~~~  234 (246)
T d1v0wa2         193 IGSKNLYP-SW----------------------------------LQDFGYIVESPEAAKQLDAKLLDPQWKYSQET  234 (246)
T ss_dssp             EESCCSSC-CC----------------------------------SBCEEEEEECHHHHHHHHHHTHHHHHHHHGGG
T ss_pred             EcCCcCCc-ch----------------------------------hccCcEEEeCHHHHHHHHHHHHHHHHHhcccc
Confidence            99999976 33                                  35999999999554 5655 799999986543


No 22 
>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.42  E-value=1.6e-14  Score=132.41  Aligned_cols=107  Identities=28%  Similarity=0.437  Sum_probs=86.9

Q ss_pred             ceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCCCcccccccccccCCcCCCcEEEEEECC----e
Q 006430           16 HGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQ----A   91 (645)
Q Consensus        16 ~g~L~v~i~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpyv~v~l~~----~   91 (645)
                      .|.|.|+|++|+||+..+..+.                                          +||||++.+..    .
T Consensus        19 ~~~L~V~V~~a~nL~~~~~~~~------------------------------------------~dpyv~v~l~~~~~~~   56 (145)
T d1dqva2          19 AGLLTVTIIKASNLKAMDLTGF------------------------------------------SDPYVKASLISEGRRL   56 (145)
T ss_dssp             TTEEEEEEEEEESCCCCSSSSC------------------------------------------CCEEEEECCCTTCCTT
T ss_pred             CCEEEEEEEEEeCCCCcCCCCC------------------------------------------cCceEEEEEccCCccc
Confidence            4889999999999998765554                                          89999999853    2


Q ss_pred             eeeeeccccCCCCCeeeeEEEEeecCC---CCeEEEEEEEcCCCC-CeeeeeEeeccccccCCceeEEEEEccCCCCC
Q 006430           92 TVARTRVLKNSQEPVWNEHFNIPLAHP---LSNLEIQVKDDDVFG-AQIIGTAAIPAHTIATGELISRWYDIIAPSGS  165 (645)
Q Consensus        92 ~~~kT~v~~~t~~P~w~e~f~~~~~~~---~~~l~i~v~d~~~~~-~~~iG~~~i~l~~l~~~~~~~~w~~l~~~~~~  165 (645)
                      ...||++++++.||.|||+|.|.+...   ...|.|.|||.+.++ +++||.+.|++..+.. ....+|++|+...++
T Consensus        57 ~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~v~v~d~~~~~~~~~iG~~~i~l~~~~~-~~~~~W~~l~~~p~~  133 (145)
T d1dqva2          57 KKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP-HGREHWAEMLANPRK  133 (145)
T ss_dssp             SCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH-HHHHHHHTSSSSSSS
T ss_pred             eeecCEEEeCCCCceecceEEEEEehhhcCCCEEEEEEEecCCCCCCcEEEEEEECchHcCc-hhhHHHHHHHhCCCC
Confidence            346899999999999999999988753   356899999999988 8999999999987652 234678888655544


No 23 
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25  E-value=2.4e-11  Score=107.70  Aligned_cols=93  Identities=25%  Similarity=0.440  Sum_probs=66.2

Q ss_pred             CCcEEEEEEC-----Ceeeeeecc--ccCCCCCeeeeE-EEE-eecCC-CCeEEEEEEEcCCCCCeeeeeEeeccccccC
Q 006430           80 SDPYVTVVVP-----QATVARTRV--LKNSQEPVWNEH-FNI-PLAHP-LSNLEIQVKDDDVFGAQIIGTAAIPAHTIAT  149 (645)
Q Consensus        80 ~dpyv~v~l~-----~~~~~kT~v--~~~t~~P~w~e~-f~~-~~~~~-~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~~  149 (645)
                      .||||+|.+-     .....+|++  ..++.||.|||+ |.+ .+..+ ...|.|.|||++   +++||++.+||+.+..
T Consensus        18 ~dPyV~V~l~g~~~D~~~~~~t~~~~~~n~~nP~wne~~~~~~~~~~~~l~~L~f~V~D~d---~~~lG~~~ipl~~l~~   94 (122)
T d2zkmx2          18 VRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG---NKFLGHRIIPINALNS   94 (122)
T ss_dssp             CCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT---TEEEEEEEEEGGGBCC
T ss_pred             CCcEEEEEEECcCCCCCccEEEEEEEeCCeecceEcccEeEEEecCCCcccEEEEEEECCC---CCEEEEEEEEcccCcC
Confidence            7999999983     223334444  467999999976 443 34433 456899999976   7999999999999987


Q ss_pred             CceeEEEEEccCCCCCCCCCCceEEEEEEE
Q 006430          150 GELISRWYDIIAPSGSPPKPGASIQLELKF  179 (645)
Q Consensus       150 ~~~~~~w~~l~~~~~~~~~~~g~l~l~l~f  179 (645)
                      |   -+|.+|.+..|++. ..+.|.+++..
T Consensus        95 G---yR~vpL~~~~g~~l-~~~~L~v~i~~  120 (122)
T d2zkmx2          95 G---YHHLCLHSESNMPL-TMPALFIFLEM  120 (122)
T ss_dssp             E---EEEEEEECTTCCEE-EEEEEEEEEEE
T ss_pred             C---ceEEEccCCCcCCC-CCceEEEEEEE
Confidence            6   47889987776643 23555555543


No 24 
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]}
Probab=97.88  E-value=9.9e-06  Score=79.92  Aligned_cols=60  Identities=10%  Similarity=0.140  Sum_probs=51.6

Q ss_pred             hhHHHHHHHHHHHhccceEEEeeeeecccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEecCCC
Q 006430          559 DKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWP  631 (645)
Q Consensus       559 e~sI~~~yl~aI~~Ak~~IYIenqYFi~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP~~p  631 (645)
                      .+.+..+++.+|.+||++|||+++||.++.             .+..+|+++|.+|++||++++|+|++-..+
T Consensus        62 ~~~~~~~~~~~I~~A~~~I~i~~~~~~pd~-------------~~~~~i~~aL~~aA~rG~~V~VriL~d~~g  121 (258)
T d1v0wa1          62 TKRLLAKMTENIGNATRTVDISTLAPFPNG-------------AFQDAIVAGLKESAAKGNKLKVRILVGAAP  121 (258)
T ss_dssp             HHHHHHHHHHHHHTCSSEEEEEEESSCCCH-------------HHHHHHHHHHHHHHHTTCCEEEEEEEECCC
T ss_pred             hHHHHHHHHHHHHHhccEEEEEEEEEcCCc-------------hHHHHHHHHHHHHHhCCCCeEEEEEeCCcc
Confidence            467899999999999999999999987753             245789999999999998888999985554


No 25 
>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]}
Probab=97.85  E-value=8.1e-06  Score=80.01  Aligned_cols=63  Identities=19%  Similarity=0.176  Sum_probs=49.1

Q ss_pred             hHHHHHHHHHHHhccceEEEeeeeecccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEecCCCCC
Q 006430          560 KSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEG  633 (645)
Q Consensus       560 ~sI~~~yl~aI~~Ak~~IYIenqYFi~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP~~p~~  633 (645)
                      +..+.+++.+|.+|+++|||++|||.++.   ++      -+.....|+++|.+|++|||+  |+||++...+.
T Consensus        53 ~~~e~a~~~lI~~A~~~I~I~~q~~~~~~---~p------~~~~~~~l~~AL~~aa~RGV~--Vrvll~~~~~~  115 (246)
T d1v0wa2          53 NPEESALRALVASAKGHIEISQQDLNATC---PP------LPRYDIRLYDALAAKMAAGVK--VRIVVSDPANR  115 (246)
T ss_dssp             CHHHHHHHHHHHTCSSEEEEEESCSSCCT---TT------SCSCCHHHHHHHHHHHHTTCE--EEEEECCGGGC
T ss_pred             ChHHHHHHHHHHhcCcEEEEEEEeecccC---Cc------cccccHHHHHHHHHHHHcCCc--EEEEEecCCcc
Confidence            34678999999999999999999998753   11      122346799999999999987  77888765433


No 26 
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]}
Probab=97.56  E-value=6e-05  Score=67.41  Aligned_cols=53  Identities=17%  Similarity=0.176  Sum_probs=45.6

Q ss_pred             hHHHHHHHHHHHhccceEEEeeeeecccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEecCCCC
Q 006430          560 KSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPE  632 (645)
Q Consensus       560 ~sI~~~yl~aI~~Ak~~IYIenqYFi~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP~~p~  632 (645)
                      .++..+++.+|.+|++.|+|+.++|.++                  +|+++|+.|++||++  |+|++.....
T Consensus        12 ~~~~~~i~~~I~~A~~~I~I~~~~~~~~------------------~i~~aL~~a~~rGV~--Vril~~~~~~   64 (152)
T d1byra_          12 GSARVLVLSAIDSAKTSIRMMAYSFTAP------------------DIMKALVAAKKRGVD--VKIVIDERGN   64 (152)
T ss_dssp             THHHHHHHHHHHHCSSEEEEEESSBCCH------------------HHHHHHHHHHHTTCE--EEEEEESTTC
T ss_pred             ccHHHHHHHHHHhCCcEEEEEEEeecCH------------------HHHHHHHHHHhcCCe--EEEEEEeecc
Confidence            4678899999999999999999999764                  799999999999987  7788876543


No 27 
>d2o8ra3 d.136.1.4 (A:318-505) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]}
Probab=96.79  E-value=0.012  Score=53.21  Aligned_cols=138  Identities=14%  Similarity=0.172  Sum_probs=91.5

Q ss_pred             chHHHHHHHHHhcc-----ceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccC
Q 006430          242 TCWEDICHAISEAH-----HLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLG  316 (645)
Q Consensus       242 ~~f~~l~~aI~~Ak-----~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~  316 (645)
                      +-|+.+.+.+++|-     .+|-|+-|....                ...|.++|.+||+.|-+|-+++ .----     
T Consensus        33 ~sF~~vv~fl~eAA~DP~V~~Ik~TlYR~a~----------------~S~Ii~aLi~AA~nGK~Vtv~v-ELkAR-----   90 (188)
T d2o8ra3          33 YTYDYVVRLLMEAAISPDVSEIRLTQYRVAE----------------NSSIISALEAAAQSGKKVSVFV-ELKAR-----   90 (188)
T ss_dssp             BCSHHHHHHHHHHHTCTTEEEEEEEESCCCS----------------CCHHHHHHHHHHHTTCEEEEEE-CCCSC-----
T ss_pred             cccHHHHHHHHHHhcCCCccEEEEEEEEecC----------------CchHHHHHHHHHHcCCEEEEEE-echhh-----
Confidence            34677888888873     688888886532                3799999999999999999997 32211     


Q ss_pred             ccCCCccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecceeeccceEEEeccC-CCCCCcceEEEEccccCCC
Q 006430          317 VKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQ-ASGNNRKITAFIGGIDLCD  395 (645)
Q Consensus       317 ~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~-~~~~~~~~vafvGG~ni~~  395 (645)
                           |=...+-+|.+.|+++||+|.+  ..+              .+.-|-|+++|--+ ..|.--+..+++|--|...
T Consensus        91 -----FDEe~NI~wa~~Le~aGv~Viy--G~~--------------glKvHaK~~lI~R~e~~g~~~~~Y~hlgTGNyn~  149 (188)
T d2o8ra3          91 -----FDEENNLRLSERMRRSGIRIVY--SMP--------------GLKVHAKTALILYHTPAGERPQGIALLSTGNFNE  149 (188)
T ss_dssp             -----C----CHHHHHHHHHHTCEEEE--CCT--------------TCCBCCCEEEEEECCCSSSCCCEEEEEESSCSSC
T ss_pred             -----hhHHHHHHHhhhHHhcCeEEee--Ccc--------------chhhcceeeEEEEEEcCccccccEEEeCCCCcCc
Confidence                 1112346788899999999984  222              23559999988543 2221123466666444333


Q ss_pred             CCCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeCh-HHHHHHHHHHH
Q 006430          396 GRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP-AAYDVLINFEQ  454 (645)
Q Consensus       396 ~r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gp-av~dl~~~F~~  454 (645)
                      .                                -..-+-|.++.-.-| +..|+...|..
T Consensus       150 ~--------------------------------TAr~YtD~~l~Ta~~~i~~Dv~~~F~~  177 (188)
T d2o8ra3         150 T--------------------------------TARIYSDTTLMTANTDIVHDVYRLFRI  177 (188)
T ss_dssp             C--------------------------------CSSCEEEEEEEECCHHHHHHHHHHHHH
T ss_pred             c--------------------------------chhheeeeeeecCCHHHHHHHHHHHHH
Confidence            0                                112567988887776 78899998864


No 28 
>d1xdpa3 d.136.1.4 (A:315-501) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]}
Probab=96.17  E-value=0.014  Score=52.79  Aligned_cols=137  Identities=15%  Similarity=0.163  Sum_probs=90.8

Q ss_pred             chHHHHHHHHHhcc-----ceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccC
Q 006430          242 TCWEDICHAISEAH-----HLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLG  316 (645)
Q Consensus       242 ~~f~~l~~aI~~Ak-----~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~  316 (645)
                      +-|+.+++.+++|-     .+|.|+-|....                ..++.++|++||+.|-+|-+++ .----     
T Consensus        34 ~sF~~vv~fl~eAA~DP~V~~Ik~TlYR~a~----------------~S~Ii~aLi~Aa~nGK~Vtv~v-ELkAR-----   91 (187)
T d1xdpa3          34 HTFEHVLELLRQASFDPSVLAIKINIYRVAK----------------DSRIIDSMIHAAHNGKKVTVVV-ELQAR-----   91 (187)
T ss_dssp             BCTHHHHHHHHHHHHCTTEEEEEEEESSCCT----------------TCHHHHHHHHHHHTTCEEEEEE-CTTCS-----
T ss_pred             hhhhHHHHHHHHHhcCCCccEEEEEEEEecC----------------CccHHHHHHHHHHcCCEEEEEE-echhc-----
Confidence            45778888888873     788888885532                3799999999999999999997 32211     


Q ss_pred             ccCCCccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecceeeccceEEEeccCCCCCCcceEEEEccccCCCC
Q 006430          317 VKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDG  396 (645)
Q Consensus       317 ~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~~~vafvGG~ni~~~  396 (645)
                           |=...+-+|.+.|+++||+|.+  ..+              .+.-|-|+++|--+..+. -+..+++|--|....
T Consensus        92 -----FDEe~NI~wa~~Le~aGv~Viy--G~~--------------glKvHaK~~lV~R~e~~~-~~~Y~higTGNyn~~  149 (187)
T d1xdpa3          92 -----FDEEANIHWAKRLTEAGVHVIF--SAP--------------GLKIHAKLFLISRKENGE-VVRYAHIGTGNFNEK  149 (187)
T ss_dssp             -----STTTTTTTTTHHHHHHTCEEEE--CCT--------------TCEECCEEEEEEEEETTE-EEEEEEEESSCSCTT
T ss_pred             -----ccHHHHHHHHHHHHHCCCEEEc--Ccc--------------cceeeeEEEEEEEEcCCc-EEEEEEecCCCcCcc
Confidence                 1112245678889999999985  222              234599999995441111 223455554433330


Q ss_pred             CCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeCh-HHHHHHHHHHH
Q 006430          397 RYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGP-AAYDVLINFEQ  454 (645)
Q Consensus       397 r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gp-av~dl~~~F~~  454 (645)
                                                      -..-+-|.++.-.-| +..|+...|..
T Consensus       150 --------------------------------TAriYtD~~l~T~~~~i~~D~~~~F~~  176 (187)
T d1xdpa3         150 --------------------------------TARLYTDYSLLTADARITNEVRRVFNF  176 (187)
T ss_dssp             --------------------------------GGGTEEEEEEEECCHHHHHHHHHHHHH
T ss_pred             --------------------------------chhheeeeeeecCCHHHHHHHHHHHHH
Confidence                                            012467988888776 78899998853


No 29 
>d1e7ua2 b.7.1.1 (A:351-524) Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=87.07  E-value=2.7  Score=37.24  Aligned_cols=50  Identities=18%  Similarity=0.235  Sum_probs=31.9

Q ss_pred             CCcEEEEEE--CCeee--eeeccccCCCCCeeeeEEEEeecC----CCCeEEEEEEEc
Q 006430           80 SDPYVTVVV--PQATV--ARTRVLKNSQEPVWNEHFNIPLAH----PLSNLEIQVKDD  129 (645)
Q Consensus        80 ~dpyv~v~l--~~~~~--~kT~v~~~t~~P~w~e~f~~~~~~----~~~~l~i~v~d~  129 (645)
                      .+-||++.+  +.+..  .+|+-+.....+.|||...|++.-    ..+.|.|.||+.
T Consensus        29 ~~l~V~~~ly~G~~~L~~~~tt~~~~~~~~~Wne~l~f~i~i~~LPr~arL~itiy~~   86 (174)
T d1e7ua2          29 LTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG   86 (174)
T ss_dssp             EEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred             eEEEEEEEEEECCEEccCceeecCCCCCCceeeeEEEeccchhhCChhhEEEEEEEEe
Confidence            346776654  44221  244444456789999998887542    366789999863


No 30 
>d2o8ra4 d.136.1.4 (A:506-691) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]}
Probab=87.01  E-value=1.3  Score=39.85  Aligned_cols=131  Identities=17%  Similarity=0.171  Sum_probs=82.6

Q ss_pred             cchHHHHHHHHHhccc----eEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccC
Q 006430          241 GTCWEDICHAISEAHH----LIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLG  316 (645)
Q Consensus       241 ~~~f~~l~~aI~~Ak~----~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~  316 (645)
                      ..+.+-|-+.|++|+.    .|.+-.-.      |.           ...+.++|-+|+++||+|.++| .++-+.. ++
T Consensus        11 ~~l~~~I~~Ei~~a~~G~~~~I~~KmNs------L~-----------D~~iI~~Ly~AS~aGV~I~LiV-RGic~L~-pg   71 (186)
T d2o8ra4          11 EAITNLIEREIENVKRGKRGYMLLKMNG------LQ-----------DKNVITQLYRASEAGVEIDLIV-RGICCLV-PD   71 (186)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEEESC------BC-----------CHHHHHHHHHHHHTTCEEEEEE-SSCBCSC-CS
T ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEeecc------cc-----------CHHHHHHHHHHhcCCCeEEEEE-Cchheec-CC
Confidence            3456667777777752    55443111      21           3689999999999999999998 7764432 22


Q ss_pred             ccCCCccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecceeeccceEEEeccCCCCCCcceEEEEccccCCCC
Q 006430          317 VKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDG  396 (645)
Q Consensus       317 ~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~~~vafvGG~ni~~~  396 (645)
                      .+               - ..+|+|.   ..-++   |+          .|-++..+-..     .+...|+|+.|+-..
T Consensus        72 v~---------------g-senI~V~---SivgR---fL----------EHsRiy~F~n~-----g~~~~yigSAD~M~R  114 (186)
T d2o8ra4          72 MP---------------Q-SRNIRVT---RLVDM---YL----------EHSRIWCFHNG-----GKEEVFISSADWMKR  114 (186)
T ss_dssp             SG---------------G-GTTEEEE---ECCSS---SE----------ECCCEEEECGG-----GSCEEEEESCCBCHH
T ss_pred             CC---------------C-CCcEEEE---Eeecc---cc----------ccceEEEEEcC-----CceEEEEeccchhhh
Confidence            21               1 2467776   22221   22          37788888321     113789999988773


Q ss_pred             CCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeChHH-HHHHHHHHHHHhhh
Q 006430          397 RYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAA-YDVLINFEQRWRKA  459 (645)
Q Consensus       397 r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gpav-~dl~~~F~~rWn~~  459 (645)
                      -.|.                                -..+.+-|.-|.. +.|...|...|+..
T Consensus       115 NLdr--------------------------------RVEv~~PI~d~~~k~~l~~iL~~~l~Dn  146 (186)
T d2o8ra4         115 NLYN--------------------------------RIETACPVLDPTLRREIIDILEIQLRDN  146 (186)
T ss_dssp             HHHT--------------------------------SBCEEEECCSHHHHHHHHHHHHHHHHCC
T ss_pred             hhhc--------------------------------ceeEEEEeCCHHHHHHHHHHHHHHcccc
Confidence            2221                                1478899999854 55667788888764


No 31 
>d1xdpa4 d.136.1.4 (A:502-688) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]}
Probab=81.94  E-value=2.5  Score=37.94  Aligned_cols=132  Identities=19%  Similarity=0.215  Sum_probs=80.4

Q ss_pred             cchHHHHHHHHHhccc----eEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCCccCccC
Q 006430          241 GTCWEDICHAISEAHH----LIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLG  316 (645)
Q Consensus       241 ~~~f~~l~~aI~~Ak~----~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~gs~~~~~  316 (645)
                      ..+.+.|-+.|++|+.    .|.+-.   .   .|.           +..+.++|-+|+++||+|.+++ -+.-+.. ++
T Consensus        11 ~~l~~~I~~Ei~~a~~G~~a~I~~K~---N---sL~-----------D~~~I~~Ly~AS~aGV~I~LiV-RGiC~L~-pg   71 (187)
T d1xdpa4          11 RLLYEMVDREIANAQQGLPSGITLKL---N---NLV-----------DKGLVDRLYAASSSGVPVNLLV-RGMCSLI-PN   71 (187)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCEEEEE---S---CBC-----------CHHHHHHHHHHHHTTCCEEEEE-SSCBCBC-TT
T ss_pred             HHHHHHHHHHHHHHHcCCCcEEEEEe---c---cCc-----------CHHHHHHHHHHHcCCCeEEEEE-cccceec-cc
Confidence            3456666667777753    454431   1   111           3699999999999999999998 6654431 22


Q ss_pred             ccCCCccccChHHHHhhhcCCCceEEeccCCCCCCccceeeeeecceeeccceEEEeccCCCCCCcceEEEEccccCCCC
Q 006430          317 VKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDG  396 (645)
Q Consensus       317 ~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HqK~vVID~~~~~~~~~~vafvGG~ni~~~  396 (645)
                      ..  |             ...+|+|.   ...++   |+          .|-.+..+-+.     .+...|+|+.|+-..
T Consensus        72 i~--g-------------~SenI~V~---SivgR---fL----------EHsRi~~F~n~-----g~~~~yi~SADwM~R  115 (187)
T d1xdpa4          72 LE--G-------------ISDNIRAI---SIVDR---YL----------EHDRVYIFENG-----GDKKVYLSSADWMTR  115 (187)
T ss_dssp             CT--T-------------TSTTEEEE---EECSS---SE----------ECCCEEEECGG-----GSCEEEEESCCBSHH
T ss_pred             cC--C-------------CcCcEEEE---Eeccc---hh----------ccCcEEEEecC-----CCcceeecCcchhhH
Confidence            21  1             12467766   11121   22          37777777221     123899999987772


Q ss_pred             CCCCCCcCCcCCCCccccCCCCCCCCCCCCCCCCCCceeeeeeEeChHH-HHHHHHHHHHHhhh
Q 006430          397 RYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAA-YDVLINFEQRWRKA  459 (645)
Q Consensus       397 r~d~~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~i~Gpav-~dl~~~F~~rWn~~  459 (645)
                      -.+                                .-..+.+-|+-|.+ +.+...|...|...
T Consensus       116 NL~--------------------------------rRVEv~~PI~d~~~k~~i~~il~~~L~Dn  147 (187)
T d1xdpa4         116 NID--------------------------------YRIEVATPLLDPRLKQRVLDIIDILFSDT  147 (187)
T ss_dssp             HHH--------------------------------SEEEEEEECCSHHHHHHHHHHHHHHHTCC
T ss_pred             HHh--------------------------------hhhheeeEeCCHHHHHHHHHHHHHHhhhh
Confidence            222                                12489999999855 45666777777654


No 32 
>d1xdpa4 d.136.1.4 (A:502-688) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]}
Probab=37.01  E-value=11  Score=33.48  Aligned_cols=29  Identities=14%  Similarity=0.175  Sum_probs=23.7

Q ss_pred             CCCchHHHHHHHHHHHHHcCCCcEEEEEecC
Q 006430          599 ADNLIPMELALKIASKIRANERFAVYVIIPM  629 (645)
Q Consensus       599 ~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP~  629 (645)
                      ..++.+.+|+++|.+|.++||.  |.+++.+
T Consensus        36 ~NsL~D~~~I~~Ly~AS~aGV~--I~LiVRG   64 (187)
T d1xdpa4          36 LNNLVDKGLVDRLYAASSSGVP--VNLLVRG   64 (187)
T ss_dssp             ESCBCCHHHHHHHHHHHHTTCC--EEEEESS
T ss_pred             eccCcCHHHHHHHHHHHcCCCe--EEEEEcc
Confidence            3677778999999999999998  6666643


No 33 
>d1xdpa3 d.136.1.4 (A:315-501) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]}
Probab=35.82  E-value=15  Score=32.29  Aligned_cols=34  Identities=12%  Similarity=0.140  Sum_probs=28.6

Q ss_pred             HHHHHHHHHHHcCCCcEEEEEecCCCCCCCCccccc
Q 006430          606 ELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQ  641 (645)
Q Consensus       606 ~i~~aL~~A~~~g~~~~V~IvlP~~p~~~~~~~~~~  641 (645)
                      .|+++|+.|+++|.+  |.+++=.+.-=+.+.|.-|
T Consensus        67 ~Ii~aLi~Aa~nGK~--Vtv~vELkARFDEe~NI~w  100 (187)
T d1xdpa3          67 RIIDSMIHAAHNGKK--VTVVVELQARFDEEANIHW  100 (187)
T ss_dssp             HHHHHHHHHHHTTCE--EEEEECTTCSSTTTTTTTT
T ss_pred             cHHHHHHHHHHcCCE--EEEEEechhcccHHHHHHH
Confidence            799999999999997  8899988877677766654


No 34 
>d2o8ra4 d.136.1.4 (A:506-691) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]}
Probab=31.75  E-value=14  Score=32.77  Aligned_cols=27  Identities=11%  Similarity=0.161  Sum_probs=21.3

Q ss_pred             CCchHHHHHHHHHHHHHcCCCcEEEEEec
Q 006430          600 DNLIPMELALKIASKIRANERFAVYVIIP  628 (645)
Q Consensus       600 ~n~i~~~i~~aL~~A~~~g~~~~V~IvlP  628 (645)
                      .++.+.+|+++|..|.++||+  |.+++.
T Consensus        37 NsL~D~~iI~~Ly~AS~aGV~--I~LiVR   63 (186)
T d2o8ra4          37 NGLQDKNVITQLYRASEAGVE--IDLIVR   63 (186)
T ss_dssp             SCBCCHHHHHHHHHHHHTTCE--EEEEES
T ss_pred             ccccCHHHHHHHHHHhcCCCe--EEEEEC
Confidence            445557999999999999987  666663


No 35 
>d2o8ra3 d.136.1.4 (A:318-505) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]}
Probab=31.67  E-value=14  Score=32.61  Aligned_cols=34  Identities=12%  Similarity=0.173  Sum_probs=25.0

Q ss_pred             HHHHHHHHHHHcCCCcEEEEEecCCCCCCCCccccc
Q 006430          606 ELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQ  641 (645)
Q Consensus       606 ~i~~aL~~A~~~g~~~~V~IvlP~~p~~~~~~~~~~  641 (645)
                      .|+++|+.|++.|.+  |.+++=.+.-=+.+.|.-|
T Consensus        66 ~Ii~aLi~AA~nGK~--Vtv~vELkARFDEe~NI~w   99 (188)
T d2o8ra3          66 SIISALEAAAQSGKK--VSVFVELKARFDEENNLRL   99 (188)
T ss_dssp             HHHHHHHHHHHTTCE--EEEEECCCSCC----CHHH
T ss_pred             hHHHHHHHHHHcCCE--EEEEEechhhhhHHHHHHH
Confidence            699999999999997  8888888776666655543


No 36 
>d1jx7a_ c.114.1.1 (A:) Hypothetical protein YchN {Escherichia coli [TaxId: 562]}
Probab=30.15  E-value=59  Score=25.50  Aligned_cols=64  Identities=14%  Similarity=0.189  Sum_probs=40.3

Q ss_pred             cCCcchHHHHHHHH--HhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEE
Q 006430          238 YKPGTCWEDICHAI--SEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLL  304 (645)
Q Consensus       238 y~~~~~f~~l~~aI--~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL  304 (645)
                      |..+.++.++.-|.  .++.+.+-...|.+...+++.+.+..+  .+ ...+.++|+.....||+|++=
T Consensus        13 ~~~~~~~~al~~A~a~~~~~~~~eV~vff~~dgV~~~~~~~~~--~~-~~~~~~~l~~l~~~gv~v~vC   78 (117)
T d1jx7a_          13 YGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKP--GE-GYNIQQMLEILTAQNVPVKLC   78 (117)
T ss_dssp             TTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGBSCCCC--SS-SCCHHHHHHHHHHTTCCEEEE
T ss_pred             CCcHHHHHHHHHHHHHHhcCCCCcEEEEEecchHHHhhccCCc--cc-cccHHHHHHHHHHCCCEEEEE
Confidence            44456777655443  334454555556667887766544321  22 368999999999999986554


No 37 
>d2yrba1 b.7.1.1 (A:596-737) Fantom {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.97  E-value=1.5e+02  Score=24.50  Aligned_cols=97  Identities=13%  Similarity=0.144  Sum_probs=62.6

Q ss_pred             CCcEEEEEECCeeeeeeccccCCCCCeeeeEEEEeecCC--------CCeEEEEEEEcCCCCCeeeeeEeeccccccC-C
Q 006430           80 SDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHP--------LSNLEIQVKDDDVFGAQIIGTAAIPAHTIAT-G  150 (645)
Q Consensus        80 ~dpyv~v~l~~~~~~kT~v~~~t~~P~w~e~f~~~~~~~--------~~~l~i~v~d~~~~~~~~iG~~~i~l~~l~~-~  150 (645)
                      +-.||.+.+-....+.|.++. ..+|.+|-+-.+.+.-.        ...+.++|+.........++.+.|.+..+.. .
T Consensus        34 p~tF~T~~Fyd~Etq~TPv~~-g~~p~ynfts~Y~V~~d~~fl~YL~~~~~~lelhqa~g~~~~tvA~g~i~l~~lLd~~  112 (142)
T d2yrba1          34 PVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILEKS  112 (142)
T ss_dssp             CEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECSSCEEEEEEEEECCSHHHHCC
T ss_pred             CcEEEEEEEEeeeeecCceec-CCCCcceeEEEEEEccCHHHHHHHhhCCEEEEEEeecCCCcceeEEEEEEhhHhhCcc
Confidence            345777776554434566654 56899998777776654        4568999988765556789999999988763 2


Q ss_pred             ceeEEEEEccCCCCCCCCCCceEEEEEE
Q 006430          151 ELISRWYDIIAPSGSPPKPGASIQLELK  178 (645)
Q Consensus       151 ~~~~~w~~l~~~~~~~~~~~g~l~l~l~  178 (645)
                      ....+--.|.+..|+.. .=|.|..-++
T Consensus       113 ~r~~~s~~l~g~~~~~~-~~G~leyw~r  139 (142)
T d2yrba1         113 GRIFCTASLIGTKGDIP-NFGTVEYWFR  139 (142)
T ss_dssp             SCEEEEEEECBSSSCCT-TSEEEEEEEE
T ss_pred             ccccceeEEEccCCCcc-eEEEEEEEEE
Confidence            23344455655554422 2366665544


No 38 
>d2f5tx2 d.136.1.5 (X:110-246) Transcriptional regulator TrmB {Thermococcus litoralis [TaxId: 2265]}
Probab=23.03  E-value=83  Score=24.96  Aligned_cols=52  Identities=23%  Similarity=0.182  Sum_probs=40.3

Q ss_pred             cchHHHHHHHHHhccceEEEEEEEeecCcceeecCCCCCCCCCCCcHHHHHHHHhhcCCEEEEEEecCCC
Q 006430          241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKT  310 (645)
Q Consensus       241 ~~~f~~l~~aI~~Ak~~I~i~~w~~~~~~~L~r~~~~~~~~g~~~~l~~~L~~~a~rGV~VriL~~D~~g  310 (645)
                      +++.+...+.+.+++.++.+.    +|.-++             .++.+-|..+.+|||.+-+-. |...
T Consensus         9 dEAIEM~rEsLe~~e~EvIvv----tP~eFF-------------~~Ire~L~~~L~rGvTlSlY~-d~~~   60 (137)
T d2f5tx2           9 DEAIEMFRESLYSAKNEVIVV----TPSEFF-------------ETIREDLIKTLERGVTVSLYI-DKIP   60 (137)
T ss_dssp             HHHHHHHHHHHHTCSSEEEEE----ECGGGH-------------HHHHHHHHHHHHTTCEEEEEE-SSCC
T ss_pred             HHHHHHHHHHHHhccceEEEE----chHHHH-------------HHHHHHHHHHHhcCcEEEEEe-cCCC
Confidence            567788888999998777654    554332             588999999999999999985 8763


No 39 
>d2f5tx2 d.136.1.5 (X:110-246) Transcriptional regulator TrmB {Thermococcus litoralis [TaxId: 2265]}
Probab=22.42  E-value=1.1e+02  Score=24.26  Aligned_cols=49  Identities=12%  Similarity=0.249  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHhccceEEEeee--eecccccCCCcccCCCCCCchHHHHHHHHHHHHHcCCCcEEEEEecCCCC
Q 006430          562 IQTAYIQAIRSAQHFIYIENQ--YFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPE  632 (645)
Q Consensus       562 I~~~yl~aI~~Ak~~IYIenq--YFi~~~~~~~~~~~~~~~n~i~~~i~~aL~~A~~~g~~~~V~IvlP~~p~  632 (645)
                      .-.++...+.+|+.-+-+.+|  ||                    .+|.+.|..+++||+.  |-|.+-+.||
T Consensus        11 AIEM~rEsLe~~e~EvIvvtP~eFF--------------------~~Ire~L~~~L~rGvT--lSlY~d~~~D   61 (137)
T d2f5tx2          11 AIEMFRESLYSAKNEVIVVTPSEFF--------------------ETIREDLIKTLERGVT--VSLYIDKIPD   61 (137)
T ss_dssp             HHHHHHHHHHTCSSEEEEEECGGGH--------------------HHHHHHHHHHHHTTCE--EEEEESSCCC
T ss_pred             HHHHHHHHHHhccceEEEEchHHHH--------------------HHHHHHHHHHHhcCcE--EEEEecCCCC
Confidence            335788889999998888875  33                    4799999999999998  6677777775


Done!