Query 006435
Match_columns 645
No_of_seqs 475 out of 1962
Neff 6.0
Searched_HMMs 46136
Date Thu Mar 28 23:13:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006435.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006435hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1737 Oxysterol-binding prot 100.0 1.4E-87 3.1E-92 760.8 31.5 540 83-643 68-647 (799)
2 KOG2209 Oxysterol-binding prot 100.0 5.5E-71 1.2E-75 560.2 10.5 230 412-644 26-259 (445)
3 PF01237 Oxysterol_BP: Oxyster 100.0 2.5E-63 5.5E-68 533.9 16.6 211 429-643 1-213 (354)
4 KOG2210 Oxysterol-binding prot 100.0 1.5E-46 3.2E-51 400.4 13.3 217 424-643 31-258 (392)
5 cd01247 PH_GPBP Goodpasture an 99.9 8.1E-24 1.8E-28 185.6 12.1 89 95-221 1-90 (91)
6 cd01265 PH_PARIS-1 PARIS-1 ple 99.9 3.2E-21 6.9E-26 170.4 10.7 89 95-223 1-94 (95)
7 PF15413 PH_11: Pleckstrin hom 99.8 1.1E-20 2.4E-25 171.9 8.3 110 95-222 1-112 (112)
8 cd01251 PH_centaurin_alpha Cen 99.8 8.8E-20 1.9E-24 163.6 11.5 90 95-224 1-101 (103)
9 cd01233 Unc104 Unc-104 pleckst 99.8 1.6E-19 3.5E-24 160.9 12.1 90 94-223 3-98 (100)
10 cd01264 PH_melted Melted pleck 99.8 4.4E-19 9.6E-24 158.2 11.0 89 95-222 2-100 (101)
11 cd01235 PH_SETbf Set binding f 99.8 1.8E-18 3.9E-23 153.0 11.4 88 96-223 2-101 (101)
12 cd01238 PH_Tec Tec pleckstrin 99.8 1.7E-18 3.7E-23 156.0 10.9 91 94-222 1-106 (106)
13 cd01246 PH_oxysterol_bp Oxyste 99.8 6.4E-18 1.4E-22 145.6 11.9 90 95-222 1-91 (91)
14 PF15409 PH_8: Pleckstrin homo 99.7 6.2E-18 1.3E-22 147.1 9.7 86 97-223 1-89 (89)
15 cd01260 PH_CNK Connector enhan 99.7 1.2E-17 2.5E-22 147.1 11.3 88 95-222 2-96 (96)
16 cd01236 PH_outspread Outspread 99.7 1.4E-17 3E-22 149.6 10.7 88 95-221 1-102 (104)
17 cd01252 PH_cytohesin Cytohesin 99.7 6.5E-17 1.4E-21 149.6 12.7 92 95-226 2-116 (125)
18 cd01257 PH_IRS Insulin recepto 99.7 1.1E-16 2.4E-21 143.2 11.7 90 93-221 2-100 (101)
19 cd01266 PH_Gab Gab (Grb2-assoc 99.7 7.4E-17 1.6E-21 145.7 10.7 87 96-222 2-107 (108)
20 cd01250 PH_centaurin Centaurin 99.7 3.2E-16 6.9E-21 135.8 10.6 90 95-222 1-94 (94)
21 cd01241 PH_Akt Akt pleckstrin 99.6 1.4E-15 3E-20 136.2 11.1 93 94-223 2-102 (102)
22 cd01245 PH_RasGAP_CG5898 RAS G 99.6 2E-15 4.4E-20 134.2 8.5 85 96-221 2-97 (98)
23 PF00169 PH: PH domain; Inter 99.6 2E-14 4.3E-19 124.4 12.4 93 94-223 2-103 (104)
24 cd01244 PH_RasGAP_CG9209 RAS_G 99.6 1.2E-14 2.6E-19 129.4 10.6 85 97-222 5-98 (98)
25 cd01219 PH_FGD FGD (faciogenit 99.5 2.2E-13 4.7E-18 121.8 12.0 96 94-224 3-100 (101)
26 cd01263 PH_anillin Anillin Ple 99.4 3.3E-13 7.2E-18 124.6 9.7 92 94-222 2-122 (122)
27 cd01237 Unc112 Unc-112 pleckst 99.4 4.5E-13 9.7E-18 120.0 9.5 81 105-223 16-103 (106)
28 KOG0930 Guanine nucleotide exc 99.4 6.8E-13 1.5E-17 134.8 10.2 97 91-227 258-379 (395)
29 cd01254 PH_PLD Phospholipase D 99.4 1.4E-12 3.1E-17 120.3 10.2 88 95-222 1-121 (121)
30 smart00233 PH Pleckstrin homol 99.4 1E-11 2.2E-16 105.4 12.6 93 94-223 2-101 (102)
31 cd01253 PH_beta_spectrin Beta- 99.3 2.2E-11 4.8E-16 108.7 10.7 90 95-222 1-104 (104)
32 KOG1739 Serine/threonine prote 99.2 7.2E-12 1.6E-16 135.1 5.3 93 94-224 25-117 (611)
33 cd01220 PH_CDEP Chondrocyte-de 99.2 1E-10 2.2E-15 104.5 11.6 93 94-224 3-98 (99)
34 cd00821 PH Pleckstrin homology 99.2 5.5E-11 1.2E-15 100.0 9.4 91 95-222 1-96 (96)
35 cd00900 PH-like Pleckstrin hom 99.1 8.2E-10 1.8E-14 93.5 11.5 87 96-222 2-99 (99)
36 KOG1090 Predicted dual-specifi 99.1 5.1E-11 1.1E-15 136.3 2.4 90 94-223 1635-1731(1732)
37 cd01230 PH_EFA6 EFA6 Pleckstri 98.9 1.1E-08 2.3E-13 94.2 11.6 99 95-226 2-114 (117)
38 PF14593 PH_3: PH domain; PDB: 98.8 1.7E-08 3.7E-13 90.8 9.0 89 93-226 13-102 (104)
39 KOG0690 Serine/threonine prote 98.8 6E-09 1.3E-13 109.3 6.8 99 93-228 15-121 (516)
40 cd01218 PH_phafin2 Phafin2 Pl 98.8 4.7E-08 1E-12 88.1 11.5 94 94-226 5-101 (104)
41 cd01256 PH_dynamin Dynamin ple 98.8 3.8E-08 8.3E-13 86.6 9.9 89 94-222 2-104 (110)
42 cd01249 PH_oligophrenin Oligop 98.6 1.2E-07 2.6E-12 85.0 8.9 48 174-221 52-103 (104)
43 cd01234 PH_CADPS CADPS (Ca2+-d 98.6 1E-07 2.3E-12 84.6 6.4 88 95-224 4-111 (117)
44 cd01243 PH_MRCK MRCK (myotonic 98.6 5.3E-07 1.1E-11 82.5 10.5 99 92-224 1-120 (122)
45 KOG0521 Putative GTPase activa 98.5 3.8E-08 8.2E-13 115.7 2.9 98 91-228 272-373 (785)
46 PF15410 PH_9: Pleckstrin homo 98.5 8.6E-07 1.9E-11 81.7 11.3 103 95-223 2-118 (119)
47 cd01242 PH_ROK Rok (Rho- assoc 98.3 4.9E-06 1.1E-10 75.2 10.1 92 95-223 2-110 (112)
48 cd01261 PH_SOS Son of Sevenles 98.2 9.5E-06 2.1E-10 74.2 10.6 102 94-224 5-110 (112)
49 KOG3640 Actin binding protein 98.1 5.7E-06 1.2E-10 96.1 6.6 100 90-226 987-1109(1116)
50 cd01239 PH_PKD Protein kinase 98.1 2.6E-05 5.6E-10 71.0 9.4 88 95-222 2-117 (117)
51 KOG0248 Cytoplasmic protein Ma 98.0 2.1E-06 4.6E-11 96.6 3.0 95 94-226 250-344 (936)
52 cd01262 PH_PDK1 3-Phosphoinosi 98.0 1.8E-05 4E-10 69.1 7.7 86 94-223 2-88 (89)
53 cd01259 PH_Apbb1ip Apbb1ip (Am 98.0 1.3E-05 2.9E-10 72.5 6.7 92 95-223 2-108 (114)
54 PTZ00267 NIMA-related protein 97.8 5.8E-05 1.3E-09 84.8 8.1 97 93-224 377-477 (478)
55 KOG3723 PH domain protein Melt 97.6 2.5E-05 5.4E-10 86.8 2.4 104 93-228 735-841 (851)
56 KOG0705 GTPase-activating prot 97.6 3.4E-05 7.5E-10 85.9 2.6 38 189-226 444-482 (749)
57 PLN02866 phospholipase D 97.5 0.00064 1.4E-08 81.5 12.1 109 93-226 182-310 (1068)
58 PLN00188 enhanced disease resi 97.5 0.00049 1.1E-08 79.7 10.4 96 93-226 4-112 (719)
59 cd01258 PH_syntrophin Syntroph 97.4 0.00042 9.1E-09 63.0 6.9 90 97-221 3-107 (108)
60 PF12814 Mcp5_PH: Meiotic cell 97.4 0.0013 2.8E-08 61.1 10.0 33 191-223 89-121 (123)
61 KOG2059 Ras GTPase-activating 97.3 0.00033 7.2E-09 80.0 6.5 93 95-228 567-669 (800)
62 cd01222 PH_clg Clg (common-sit 97.3 0.0033 7.1E-08 56.2 11.0 87 94-223 5-95 (97)
63 KOG1451 Oligophrenin-1 and rel 97.2 0.0012 2.5E-08 74.2 8.6 100 91-224 263-368 (812)
64 KOG3751 Growth factor receptor 97.1 0.00091 2E-08 74.3 6.6 97 91-224 315-425 (622)
65 KOG0932 Guanine nucleotide exc 97.1 0.0031 6.7E-08 70.6 10.7 107 90-228 503-622 (774)
66 cd01221 PH_ephexin Ephexin Ple 96.9 0.003 6.4E-08 59.0 7.6 79 109-220 27-119 (125)
67 cd01224 PH_Collybistin Collybi 96.8 0.014 3.1E-07 53.2 11.0 93 94-223 3-107 (109)
68 PF15406 PH_6: Pleckstrin homo 96.8 0.003 6.5E-08 57.1 6.2 49 171-221 62-111 (112)
69 PF15404 PH_4: Pleckstrin homo 96.4 0.019 4.2E-07 57.1 9.6 32 95-126 1-32 (185)
70 KOG4424 Predicted Rho/Rac guan 96.1 0.0085 1.8E-07 67.6 5.9 99 94-227 273-373 (623)
71 KOG1117 Rho- and Arf-GTPase ac 96.0 0.0031 6.8E-08 73.4 1.9 95 91-226 85-180 (1186)
72 cd01240 PH_beta-ARK Beta adren 95.9 0.011 2.5E-07 53.5 4.6 92 94-226 4-101 (116)
73 cd01232 PH_TRIO Trio pleckstri 95.5 0.21 4.5E-06 46.1 11.4 52 173-224 56-113 (114)
74 KOG1117 Rho- and Arf-GTPase ac 95.5 0.059 1.3E-06 63.3 9.5 89 94-222 493-600 (1186)
75 cd01228 PH_BCR-related BCR (br 95.4 0.089 1.9E-06 46.7 8.2 90 94-223 4-94 (96)
76 cd01226 PH_exo84 Exocyst compl 95.2 0.14 3.1E-06 46.0 9.1 52 173-224 45-99 (100)
77 KOG3531 Rho guanine nucleotide 95.1 0.0095 2.1E-07 69.5 1.6 96 93-228 924-1024(1036)
78 PTZ00283 serine/threonine prot 95.0 0.056 1.2E-06 61.4 7.7 35 190-224 455-490 (496)
79 KOG3543 Ca2+-dependent activat 95.0 0.0096 2.1E-07 67.4 1.2 91 94-226 465-568 (1218)
80 KOG0248 Cytoplasmic protein Ma 94.7 0.0092 2E-07 68.3 0.1 87 94-223 260-348 (936)
81 cd01248 PH_PLC Phospholipase C 93.4 0.44 9.5E-06 43.4 8.6 34 188-221 77-114 (115)
82 cd01225 PH_Cool_Pix Cool (clon 89.9 1.8 3.9E-05 39.7 8.2 78 108-222 27-108 (111)
83 cd01227 PH_Dbs Dbs (DBL's big 89.8 4.2 9.2E-05 38.6 11.0 54 173-226 62-118 (133)
84 PF15408 PH_7: Pleckstrin homo 89.8 0.17 3.7E-06 44.1 1.5 97 96-226 1-100 (104)
85 KOG0592 3-phosphoinositide-dep 88.7 0.93 2E-05 51.8 6.6 90 92-226 450-540 (604)
86 cd01223 PH_Vav Vav pleckstrin 87.0 5 0.00011 37.2 9.2 34 192-225 78-113 (116)
87 KOG4807 F-actin binding protei 86.8 0.0085 1.8E-07 64.6 -10.2 80 108-224 34-115 (593)
88 KOG1738 Membrane-associated gu 85.5 0.45 9.8E-06 54.7 2.0 37 91-127 560-599 (638)
89 PF15405 PH_5: Pleckstrin homo 76.0 3.2 7E-05 39.3 3.9 34 94-127 2-35 (135)
90 KOG3551 Syntrophins (type beta 76.0 2.1 4.5E-05 46.9 2.9 94 94-222 293-400 (506)
91 KOG3727 Mitogen inducible gene 75.0 0.57 1.2E-05 53.2 -1.7 52 172-223 400-458 (664)
92 KOG1170 Diacylglycerol kinase 72.0 0.16 3.6E-06 59.4 -6.9 90 95-225 4-96 (1099)
93 KOG3520 Predicted guanine nucl 70.5 3.9 8.5E-05 50.5 3.7 57 173-229 667-727 (1167)
94 PF09726 Macoilin: Transmembra 68.5 18 0.00038 43.4 8.5 73 245-317 441-520 (697)
95 KOG3531 Rho guanine nucleotide 65.0 4.6 0.0001 48.2 2.7 98 94-230 751-851 (1036)
96 KOG3551 Syntrophins (type beta 57.8 13 0.00028 41.1 4.3 54 173-226 215-274 (506)
97 cd01255 PH_TIAM TIAM Pleckstri 57.2 63 0.0014 31.2 8.2 29 198-226 129-157 (160)
98 KOG3523 Putative guanine nucle 56.3 16 0.00034 42.5 4.8 21 200-220 571-591 (695)
99 KOG4424 Predicted Rho/Rac guan 54.8 10 0.00022 43.8 3.1 92 94-225 498-597 (623)
100 cd01231 PH_Lnk LNK-family Plec 49.3 95 0.0021 28.4 7.7 35 187-221 71-106 (107)
101 PF08458 PH_2: Plant pleckstri 48.2 31 0.00066 31.8 4.5 34 191-224 71-104 (110)
102 KOG4236 Serine/threonine prote 45.0 79 0.0017 36.8 8.0 40 185-225 474-525 (888)
103 KOG1737 Oxysterol-binding prot 44.4 30 0.00066 41.8 5.0 57 171-229 117-174 (799)
104 KOG4047 Docking protein 1 (p62 42.0 12 0.00026 42.0 1.2 29 93-121 8-38 (429)
105 KOG3003 Molecular chaperone of 41.2 50 0.0011 34.3 5.3 41 503-555 180-221 (236)
106 PF09755 DUF2046: Uncharacteri 38.7 1.3E+02 0.0029 32.5 8.2 21 292-312 156-176 (310)
107 cd05135 RasGAP_RASAL Ras GTPas 35.4 11 0.00024 41.1 -0.4 23 94-116 304-332 (333)
108 KOG2070 Guanine nucleotide exc 34.2 55 0.0012 37.4 4.6 48 174-221 353-404 (661)
109 PF06785 UPF0242: Uncharacteri 30.3 1.6E+02 0.0034 32.3 7.1 49 266-314 108-156 (401)
110 cd05128 RasGAP_GAP1_like The G 28.4 15 0.00032 39.8 -0.9 24 93-116 286-314 (315)
111 KOG3915 Transcription regulato 28.0 1.6E+02 0.0035 33.5 6.9 42 276-317 547-588 (641)
112 PF10504 DUF2452: Protein of u 26.5 54 0.0012 32.1 2.7 25 506-530 85-109 (159)
113 cd05394 RasGAP_RASA2 RASA2 (or 25.7 14 0.00031 39.8 -1.5 25 93-117 283-312 (313)
114 cd05134 RasGAP_RASA3 RASA3 (or 25.0 19 0.00041 38.9 -0.8 26 93-118 280-310 (310)
115 PF15277 Sec3-PIP2_bind: Exocy 23.7 2.4E+02 0.0051 24.9 6.0 35 189-224 55-89 (91)
116 PF14254 DUF4348: Domain of un 23.7 99 0.0021 32.8 4.1 40 588-627 225-266 (273)
117 KOG0982 Centrosomal protein Nu 23.5 3.1E+02 0.0066 31.1 8.0 48 267-314 335-382 (502)
118 KOG0689 Guanine nucleotide exc 22.9 80 0.0017 35.9 3.6 38 187-224 320-361 (448)
119 COG4026 Uncharacterized protei 21.5 9.4E+02 0.02 25.1 10.5 81 174-256 33-120 (290)
120 COG4026 Uncharacterized protei 21.5 3.3E+02 0.0072 28.3 7.2 24 271-294 163-186 (290)
121 PRK00846 hypothetical protein; 21.4 3.7E+02 0.008 23.3 6.5 12 245-256 8-19 (77)
122 COG1471 RPS4A Ribosomal protei 21.1 8.3E+02 0.018 25.6 10.0 15 511-525 92-106 (241)
123 PF05278 PEARLI-4: Arabidopsis 20.6 5.3E+02 0.012 27.5 8.8 53 203-255 115-178 (269)
No 1
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-87 Score=760.80 Aligned_cols=540 Identities=33% Similarity=0.514 Sum_probs=415.4
Q ss_pred ccccccccCCCceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccc-
Q 006435 83 VDVKINDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKE- 161 (645)
Q Consensus 83 ~~~~~~~~~~~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~- 161 (645)
....++. .+..++|||+||++++++|++|||+|.+|+|+||++.++.+..+..++....+.|+...-..++....+..
T Consensus 68 ~~~~~~~-~~~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~~q~ 146 (799)
T KOG1737|consen 68 SEAGIKK-SGASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSFSKTTCGGGINLVTAWIQNGERMDICSVDGSCQI 146 (799)
T ss_pred ccccccc-ccccccceeeccccccCCcccceEEecCcceeeeccCCccccCCCCcccccccccccCCCcccchhhcccch
Confidence 3334455 67789999999999999999999999999999999999988887767666667777543322222211111
Q ss_pred -cc--cccccCCCCceEEEec-cceEEecCCCCccEEEEeCCeEEEEEcCC---H-HHHHHHHHHHHHHHHhcccccCCc
Q 006435 162 -TT--SQRLLNRKPFGEVHLK-VSSIRDSKSDDKRFSIFTGTKRLHLRAET---R-EDRFAWMEALQAVKDMFPRMSNSE 233 (645)
Q Consensus 162 -~~--~~~~~~~kp~G~I~L~-~ssi~~~~~d~~~F~I~t~~rt~~L~AeS---~-~dr~~WI~AL~~a~~~~~~~~~~~ 233 (645)
+. ..........+.++|. ...++.. ++..++.+.+.+++.+++.+. . .++..|+++++.+..+.++.....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (799)
T KOG1737|consen 147 YLVELSKKLQRQGWLHALELAPLIAVEQT-SEYENENKSVMTKRIPLSIAVISVAQETREINVDVLRLLSSLPNLTGQLL 225 (799)
T ss_pred hhhhhhHHHhhcchhhhhhhccchhhhcc-ccccccccccccccccchhhhhcccccchhhhhhhhhhccccccchhhhh
Confidence 00 0112334456777776 4566666 677888888888888888774 3 778999999999999887754332
Q ss_pred --cCCCCCc-----------ccccHHHHHHHHhhhcccHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006435 234 --LMAPMDS-----------IQVSTEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETE 300 (645)
Q Consensus 234 --~~~~~~~-----------~~~s~e~L~~rL~e~~~~~~~i~~~eqim~~E~s~l~~qL~~~~e~~~~L~d~L~~le~e 300 (645)
...+..+ ....+++++++++.++.+..+.++||+++++++...|.++..+.++++.|+++|++++.|
T Consensus 226 ~r~l~~~~~~~~~~s~s~~k~~~~~e~~~~k~~~s~~s~~a~~~~e~~~~s~~~~~s~~s~~~~~q~~~l~~~l~~le~q 305 (799)
T KOG1737|consen 226 LRELNALLEDKKEQSSSKSKLQERTERIALKVLTSLASVFAECDDEAELLSQSRIESDASHSESEQRIRLQEALSALENQ 305 (799)
T ss_pred hhhhccccccccccccchhhhHHHHHHHHHHHhhhhHHHHhHHHHHHHHHHHhHhhhhhhcchhhhhhhhhhHHHHHHhh
Confidence 1111111 233478888999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhHHhHhHhhhhccccccccccCCCCCCCCCCCCCCcccCCCCCCCccccccccccccccc--cCcccc------
Q 006435 301 KVDLENTVVDESQRQLIDQDASSTLRQDKFSEGTTESDDDNERVDGVEDETDEDENTFFDTRDFLS--SSSLRS------ 372 (645)
Q Consensus 301 k~~LE~tvv~~sk~~~~~~~~~~~~~~~~~~~~st~s~~~~~~~~~~~~~~~dde~~f~Da~~~~~--~~~~~~------ 372 (645)
+.+||..++....++....... . +. + .....++.....+|++|||||.+.++ .....+
T Consensus 306 ~~~le~a~~~~~~~~~~~~~~~-------~----~~-~--~~~~~~~~~~~~~e~~e~~da~s~~s~~~~~~~s~~~~e~ 371 (799)
T KOG1737|consen 306 NTDLEVALRRAHAAQAALDLSK-------V----TR-L--SLLHEEESFSESDELTEQFDAESSLSDAQESLDSNSESEN 371 (799)
T ss_pred hhhHHHHHhHhhhhhhccCccc-------c----cc-c--cccccccccccccccccccccccccchhhhccCCcccccc
Confidence 9999988775443332211100 0 01 0 00011224444567789999987654 111111
Q ss_pred CCCCCCCCCCC---CCccccccccccccccc--cc--ccccCCCccccccccCCCcccccccchhHHHHhhhcCCCCccc
Q 006435 373 NGSDFRSSSFS---SDEESLQIVESENDIDA--SI--RFVGTNYPYIKRRKKLPDPVEKEKGVSLWAMIKDNIGKDLTKI 445 (645)
Q Consensus 373 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~R~~lp~~~~~~~~~~lwsilK~~iGkDLski 445 (645)
.+..+..+..+ ..+..... +.+.... .. .....-.+.++||++||++..++.+++||+|||++||||||+|
T Consensus 372 ~~s~~~~s~~s~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~~~~~~~rr~~lp~~~~~~~~islw~~~k~~iGkDlskv 449 (799)
T KOG1737|consen 372 EGSEDEESYTSDISDNGSSDAL--SADGDKSSQALNEKVPSGSGAEVARRTNLPAPSKPSSSISLWSILRNNIGKDLSKV 449 (799)
T ss_pred cccccccccccccccCCCcccc--ccccccccccccccccccccccccccccCCCCcCcCCCccHHHHHhhccccccccc
Confidence 11111111000 00000000 0000000 00 0000113447999999999889999999999999999999999
Q ss_pred ccccccccCcChhhhhhccccchHHHHHHhhccCCCCHHHHHHHHHHHHhhhccccCCCCCCCCCCCCCCeEEEEeCCCC
Q 006435 446 CLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKG 525 (645)
Q Consensus 446 slPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~~f~~S~~~~~~~r~~KPfNPiLGETfe~~~~d~g 525 (645)
+|||+||||+|+|||++|+|||++|||+|+++ +|+++||++|++|++|+|+.+..|++|||||||||||||+++|+|
T Consensus 450 ~~PV~~nEP~S~LQr~~EdlEYs~LLd~A~~~---~d~~~R~~~vaafavS~Ya~t~~r~~KPFNPlLgETyE~~r~dkg 526 (799)
T KOG1737|consen 450 SMPVEFNEPLSLLQRVAEDLEYSELLDKAANY---EDPLERMVYVAAFAVSSYSSTSRRTAKPFNPLLGETYEMDRPDKG 526 (799)
T ss_pred ccceecCCcchHHHHhhhhccchhhhHHHHhc---CCcHHHHHHHHHHHhhhcchhcccccCCCCcccccceEeeccCCc
Confidence 99999999999999999999999999999986 789999999999999999988999999999999999999999999
Q ss_pred EEEEEeccccCCcceeeEEeCCceEEEEEeeeeEEEEeeEEEEEeceEEEEEec-CCeEEEeecccceEeeeccceeeEE
Q 006435 526 LQFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFD-DGEVFQWSKVTSSIYNLILGKLYCD 604 (645)
Q Consensus 526 ~r~iaEQVSHHPPIsA~~~e~~g~~~~g~~~~k~kF~G~si~v~~~G~~~l~f~-~ge~Y~~~~p~~~v~nii~G~~~~e 604 (645)
+|||+|||||||||+|+|||+.+|.|||++.+++||||+||+|.|.|.++|+|+ +|++|+|.+|+++|+|||+|++|+|
T Consensus 527 ~rf~sEqVSHhPPi~A~h~es~~w~~~~ds~~~sKF~Gksi~v~P~G~l~l~~~~~G~~~~w~kvtt~v~nii~Gk~~~D 606 (799)
T KOG1737|consen 527 LRFFSEQVSHHPPISACHAESNNWTFWGDSKVKSKFWGKSIEVPPLGILHVTLKNIGEHYSWAKVTTTVHNIILGKLWVD 606 (799)
T ss_pred eeeeeeeeccCCCcccccccCCCceeeccccccccccccceeecCCceEEEEEcCCCccccccCccceecceeecccccc
Confidence 999999999999999999999999999999999999999999999999999999 5999999999999999999999999
Q ss_pred eceeEEEEeC-Cc-cEEEEEEeecCccCCCCceEEEEEeec
Q 006435 605 HYGTMRIEGN-RE-YSCKLKFKEQSIIDRNPHQVHLTELHC 643 (645)
Q Consensus 605 ~~G~~~I~~~-tg-~~~~l~F~~k~~~g~~~~~v~G~I~~~ 643 (645)
++|+|.|+++ ++ .+|.|+|++.|||+++.|+|+|.|++.
T Consensus 607 ~~ge~~i~n~~~~~~~c~L~F~~~~~~~~~~~ev~g~V~~~ 647 (799)
T KOG1737|consen 607 HYGEMEITNHTTGSDKCKLKFVKAGYFSRNAREVEGSVRNK 647 (799)
T ss_pred ccccEEEecCCCCcceeEEEEeeecccCCCcceeEEEEeCC
Confidence 9999999996 55 579999999999999999999999974
No 2
>KOG2209 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-71 Score=560.17 Aligned_cols=230 Identities=42% Similarity=0.712 Sum_probs=223.6
Q ss_pred ccccccCCCcccccccchhHHHHhhhcCCCCcccccccccccCcChhhhhhccccchHHHHHHhhccCCCCHHHHHHHHH
Q 006435 412 IKRRKKLPDPVEKEKGVSLWAMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVA 491 (645)
Q Consensus 412 ~~~R~~lp~~~~~~~~~~lwsilK~~iGkDLskislPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~ 491 (645)
.+.||+||+++-....+|||+|||+|||||||||+|||+||||+|||||++|.|+|.+||.+|+. +.||+|||.+|+
T Consensus 26 hk~RT~LPa~m~sr~d~SIW~Ilr~ciGkelSkiTmPV~~NEPLSFLQRltEyme~~yLi~kAs~---~~~p~eRmqyVA 102 (445)
T KOG2209|consen 26 HKHRTSLPAPMFSRNDFSIWSILRKCIGKELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASS---QSDPVERMQYVA 102 (445)
T ss_pred hhhcccCCccccccccccHHHHHHhhhchhhhheeeeeeeCCcHHHHHHHHHHHHHHHHHHHHhh---CCChHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999997 489999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCCCeEEEEeCCCCEEEEEeccccCCcceeeEEe--CCceEEEEEeeeeEEEEeeEEEEE
Q 006435 492 AFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLQFFSEKVSHHPMIVACHCQ--GTGWKFWGDSNLKSKFWGRSIQLD 569 (645)
Q Consensus 492 ~f~~S~~~~~~~r~~KPfNPiLGETfe~~~~d~g~r~iaEQVSHHPPIsA~~~e--~~g~~~~g~~~~k~kF~G~si~v~ 569 (645)
|||+|+.++...|+.||||||||||||+.+.|.|+|||||||||||||||||+| +..+.|.|.+.++.||||++|++.
T Consensus 103 AFAvsavas~weR~gKPFNPLl~et~el~r~dlg~R~i~EQVSHHPPiSAfhaEgl~~dF~fhGsi~PklkFWgksvea~ 182 (445)
T KOG2209|consen 103 AFAVSAVASQWERTGKPFNPLLGETYELEREDLGFRFISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAE 182 (445)
T ss_pred HHHHHHHHHhHHHhcCCCcchhhhhhhheecccceEEeehhhccCCChhHhhhcccCcceEEeeeecccceeccceeecC
Confidence 999999999989999999999999999999999999999999999999999999 579999999999999999999999
Q ss_pred eceEEEEEec-CCeEEEeecccceEeeeccceeeEEeceeEEEEeC-CccEEEEEEeecCccCCCCceEEEEEeecc
Q 006435 570 PVGVLTLEFD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGN-REYSCKLKFKEQSIIDRNPHQVHLTELHCS 644 (645)
Q Consensus 570 ~~G~~~l~f~-~ge~Y~~~~p~~~v~nii~G~~~~e~~G~~~I~~~-tg~~~~l~F~~k~~~g~~~~~v~G~I~~~~ 644 (645)
|.|.++|+|. .||.|+|+.|+++|||||+|++||+++|.|+|.++ ||++|+++|+++|+||++.|+|+|+|++.+
T Consensus 183 Pkgtitle~~k~nEaYtWtnp~CcvhNiIvGklwieqyg~~eI~nh~Tg~~~vl~Fk~~G~~gk~lHkVEG~i~d~~ 259 (445)
T KOG2209|consen 183 PKGTITLELLKHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGHKCVLNFKPCGLFGKELHKVEGHIQDKS 259 (445)
T ss_pred CCceEEEEecccCcceeccCCcceeeeehhhhhhHhhcCcEEEEecCccceeEEecccccccccchhheeehhhccc
Confidence 9999999997 79999999999999999999999999999999996 899999999999999999999999999854
No 3
>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related. These include mammalian oxysterol-binding protein (OSBP), a protein of about 800 amino-acid residues that binds a variety of oxysterols (oxygenated derivatives of cholesterol); yeast OSH1, a protein of 859 residues that also plays a role in ergosterol synthesis; yeast proteins HES1 and KES1, highly related proteins of 434 residues that seem to play a role in ergosterol synthesis; and yeast hypothetical proteins YHR001w, YHR073w and YKR003w.; PDB: 3SPW_A 1ZI7_C 1ZHW_A 1ZHX_A 1ZHY_A 1ZHZ_A 1ZHT_A.
Probab=100.00 E-value=2.5e-63 Score=533.89 Aligned_cols=211 Identities=46% Similarity=0.849 Sum_probs=183.7
Q ss_pred hhHHHHhhhcCCCCcccccccccccCcChhhhhhccccchHHHHHHhhccCCCCHHHHHHHHHHHHhhhccccCCCCCCC
Q 006435 429 SLWAMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRICKP 508 (645)
Q Consensus 429 ~lwsilK~~iGkDLskislPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~~f~~S~~~~~~~r~~KP 508 (645)
|||++||+++||||++|+|||+|+||+|+|||++++|+|++||++|++ .+||++||++|++|++|+|+.+..|++||
T Consensus 1 s~w~~lK~~~G~dLs~islPv~~~eP~S~Lqr~~~~~~y~~lL~~Aa~---~~d~~eR~~~V~~f~~S~~~~~~~~~~KP 77 (354)
T PF01237_consen 1 SIWSFLKQKIGKDLSRISLPVFFNEPRSFLQRLAEDFEYPDLLDKAAE---EDDPLERMLYVAAFALSSYSSTPGRTKKP 77 (354)
T ss_dssp HHHHHHHHT--S-GGGS---GGGEEEEEGGGGGGGGSSSHHHHHGGGG---S-HHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHhhhcCCCChhcCccCceecCCCcHHHhhhhhhhChHHHhccCC---CCCHHHHHHHHHHHHHhhhhhhcCCCCcC
Confidence 699999999999999999999999999999999999999999999986 58999999999999999999987788999
Q ss_pred CCCCCCCeEEEEeCCCCEEEEEeccccCCcceeeEEeCCceEEEEEeeeeEEEEeeEEEEEeceEEEEEecC-CeEEEee
Q 006435 509 FNPLLGETYEADYPDKGLQFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDD-GEVFQWS 587 (645)
Q Consensus 509 fNPiLGETfe~~~~d~g~r~iaEQVSHHPPIsA~~~e~~g~~~~g~~~~k~kF~G~si~v~~~G~~~l~f~~-ge~Y~~~ 587 (645)
||||||||||+.++ +|++|+||||||||||+|||++++||+++|++.++++|+|+||++.+.|.++|+|++ ||+|+|+
T Consensus 78 fNPiLGETfe~~~~-~~~~~~aEQVSHHPPisa~~~~~~~~~~~g~~~~~~kf~g~sv~~~~~G~~~i~f~~~~e~Y~~~ 156 (354)
T PF01237_consen 78 FNPILGETFELVRP-DGTRFIAEQVSHHPPISAFHAEGRGWKFYGHIEPKSKFWGNSVEVNPIGKVTITFPDGGETYTWT 156 (354)
T ss_dssp E---TT-EE--TT--T-EEEEEEEEETTTTEEEEEEEETTEEEEEEEEEEEEE-TT-EEEEEEEEEEEEET--TEEEEEE
T ss_pred cCCCCcceeeeccC-ceEEEEEecccCCCCceEEEEEcCCEEEEEEEeeeEEEeceEEEEEECCcEEEEEcCCceEEEEe
Confidence 99999999999988 799999999999999999999999999999999999999999999999999999985 7999999
Q ss_pred cccceEeeeccceeeEEeceeEEEEeC-CccEEEEEEeecCccCCCCceEEEEEeec
Q 006435 588 KVTSSIYNLILGKLYCDHYGTMRIEGN-REYSCKLKFKEQSIIDRNPHQVHLTELHC 643 (645)
Q Consensus 588 ~p~~~v~nii~G~~~~e~~G~~~I~~~-tg~~~~l~F~~k~~~g~~~~~v~G~I~~~ 643 (645)
+|++.|+|||+|++|+|++|+|+|+|. +|++|+|+|+++||||++.|+|+|+|++.
T Consensus 157 ~p~~~i~gi~~G~~~~e~~G~~~i~~~~tg~~~~i~f~~~~~f~~~~~~v~G~I~~~ 213 (354)
T PF01237_consen 157 KPTTYIRGIIFGKRYIEHVGKMVITCHKTGLKAEIEFKPKGWFSGKSNEVEGKIYDS 213 (354)
T ss_dssp --SEEEESTTTTS-EEEEESEEEEEET-TS-EEEEEEETSSSTSSSTTEEEEEEESS
T ss_pred cCcEEEeeeecccEEEEecCCEEEEcCCcceEEEEEEecCCcccccceeeEEEEEEc
Confidence 999999999999999999999999995 99999999999999999999999999983
No 4
>KOG2210 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-46 Score=400.36 Aligned_cols=217 Identities=25% Similarity=0.333 Sum_probs=200.9
Q ss_pred ccccchhHHHHhh-hcCCCCcccccccccccCcChhhhhhccccchHHHHHHhhccCCCCHHHHHHHHHHHHhhhccccC
Q 006435 424 KEKGVSLWAMIKD-NIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTE 502 (645)
Q Consensus 424 ~~~~~~lwsilK~-~iGkDLskislPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~~f~~S~~~~~~ 502 (645)
++.+..||.++|+ .+|+|||+|+||.|++||+|+||++++.+.+++||-.+.. ..||++||+.|++|++|+|+...
T Consensus 31 e~~~s~i~~L~sq~rpg~DLs~v~LPtfile~rs~Le~~~~~~~~~dll~~~~~---~~~p~~R~~~VvkwylS~~~~~~ 107 (392)
T KOG2210|consen 31 EEGKSIILDLLSQLRPGMDLSRVVLPTFILEPRSLLEKYTDFSYHPDLLLEASS---EADPLERMLAVVKWYLSGFHAGP 107 (392)
T ss_pred hhccceeecHhhhccCCCCcccccchhhhhhhHHHHHHhhhhhhccchhccccc---CCCHHHHhhhheeeeehhccccc
Confidence 3555779999999 8999999999999999999999999999988888877764 68999999999999999999988
Q ss_pred CCCCCCCCCCCCCeEEEEeC-----C-CCEEEEEeccccCCcceeeEEeC--CceEEEEEeeeeEEEEeeEEEEEeceEE
Q 006435 503 GRICKPFNPLLGETYEADYP-----D-KGLQFFSEKVSHHPMIVACHCQG--TGWKFWGDSNLKSKFWGRSIQLDPVGVL 574 (645)
Q Consensus 503 ~r~~KPfNPiLGETfe~~~~-----d-~g~r~iaEQVSHHPPIsA~~~e~--~g~~~~g~~~~k~kF~G~si~v~~~G~~ 574 (645)
...+|||||||||||.|.|. + +.+.|+||||||||||||||++. .|+++.|++.++++|.|+|+.|.+.|..
T Consensus 108 ~~~~~PyNPILGEtF~~~w~~~~~p~~~~~~~iAEQVSHHPPvSAf~~~~~~~~i~v~g~v~~kSkF~G~s~~V~~~G~~ 187 (392)
T KOG2210|consen 108 KGRKKPYNPILGETFTCHWKYPPHPSKGDTVFVAEQVSHHPPVSAFYVTCPKKGIQVDGHVWAKSKFLGNSIAVAMIGKG 187 (392)
T ss_pred ccccCCCCccchhhcccccccCCCCCCceEEEEeecccCCCCcceeeEEccccCeEEEEEEeecccccccceeEEEcCCc
Confidence 77888999999999999982 2 45999999999999999999975 5999999999999999999999999999
Q ss_pred EEEec-CCeEEEeecccceEeeeccceeeEEeceeEEEEe-CCccEEEEEEeecCccCCCCceEEEEEeec
Q 006435 575 TLEFD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEG-NREYSCKLKFKEQSIIDRNPHQVHLTELHC 643 (645)
Q Consensus 575 ~l~f~-~ge~Y~~~~p~~~v~nii~G~~~~e~~G~~~I~~-~tg~~~~l~F~~k~~~g~~~~~v~G~I~~~ 643 (645)
+|+|. .+|+|.+++|..+++|+++|.+|+|+.|.++|.| .+++.+.+.|+.++|+||..+.+.|.|+..
T Consensus 188 ~l~ll~~~E~Y~~t~P~~~~rg~~~~~p~velggkv~I~c~kt~~~a~~~~~~~~f~g~~~s~~~~~ik~~ 258 (392)
T KOG2210|consen 188 VLKLLDHDETYLITFPNAYARGILLGAPWVELGGKVVIECPKTGLSAILESILKPFLGGKNSFNARSIKGP 258 (392)
T ss_pred EEEEEecCcceeeccCCceeeeeeeccceEecCceEEEEcCCcceeeeEeeccCcccccccccceEEEEcc
Confidence 99997 6999999999999999999999999999999999 589999999999999999999999888843
No 5
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.90 E-value=8.1e-24 Score=185.65 Aligned_cols=89 Identities=39% Similarity=0.699 Sum_probs=78.3
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCce
Q 006435 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (645)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (645)
++|||.||+|+.|+||+|||||++|.|+||+++. + ....|+|
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~--------~------------------------------~~~~~~G 42 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEA--------E------------------------------KSHGCRG 42 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCc--------c------------------------------CcCCCcE
Confidence 4799999999999999999999999999999862 1 1123679
Q ss_pred EEEeccceEEecCCCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHH
Q 006435 175 EVHLKVSSIRDSKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQA 221 (645)
Q Consensus 175 ~I~L~~ssi~~~~~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~ 221 (645)
.|+|+.|.|...+.+.++|.|.++. |+|+|+|+|++||++||+||+.
T Consensus 43 ~I~L~~~~i~~~~~~~~~F~i~~~~~r~~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 43 SIFLKKAIIAAHEFDENRFDISVNENVVWYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred EEECcccEEEcCCCCCCEEEEEeCCCeEEEEEeCCHHHHHHHHHHHhh
Confidence 9999999998877778999997766 9999999999999999999984
No 6
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.85 E-value=3.2e-21 Score=170.40 Aligned_cols=89 Identities=30% Similarity=0.533 Sum_probs=76.4
Q ss_pred eEEEEEeecC--CCCCceeeEEEEe--CCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 95 ISGVLYKWVN--YGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 95 ~~G~L~K~~n--~~KgWkrRWFVL~--~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
++|||.|+++ ..|+||+|||||+ ++.|+||+++. ..
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~----------------------------------------d~ 40 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQ----------------------------------------DA 40 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCC----------------------------------------cc
Confidence 4799999986 5899999999997 46899999752 12
Q ss_pred CCceEEEeccceEEecCCC-CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLKVSSIRDSKSD-DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~~d-~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
+|.|.|+|..+.+..+..+ +..|.|.|++|+|+|+|+|++||++||+||+.++
T Consensus 41 ~p~G~I~L~~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~~~ 94 (95)
T cd01265 41 KPLGRVDLSGAAFTYDPREEKGRFEIHSNNEVIALKASSDKQMNYWLQALQSKR 94 (95)
T ss_pred cccceEECCccEEEcCCCCCCCEEEEEcCCcEEEEECCCHHHHHHHHHHHHhhc
Confidence 4789999999887765444 7899999999999999999999999999999875
No 7
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.83 E-value=1.1e-20 Score=171.95 Aligned_cols=110 Identities=50% Similarity=0.851 Sum_probs=59.9
Q ss_pred eEEEEEeecCC-CCCceeeEEEEe-CCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 95 ISGVLYKWVNY-GKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 95 ~~G~L~K~~n~-~KgWkrRWFVL~-~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
++|||+||+|+ ++|||+|||||+ ||+|+|||.++ ...+.+|+|+.+.+.+.+.......+. ..
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~---------~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~ 65 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPR---------DKKDVRIIGEESSRVIRKGDWSISRRS------SR 65 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS----------------------TT-SB-SEEEE---GG------GT
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeeccc---------ccccccccccchhceEeecccCccccc------cc
Confidence 68999999999 999999999999 99999999842 235667777766544433222111100 00
Q ss_pred ceEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
...++.. . .....+.+.|.|+|++|+|||+|++.+|+.+||+||+.|
T Consensus 66 ~~~~~~~-~--~~~~~~~~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 66 IQGIKDK-N--PFGEIHLKVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp -EEEES--T----SS-SSEEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred ccccccC-C--cccCcCCCCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 0111111 0 012345678889999999999999999999999999986
No 8
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.81 E-value=8.8e-20 Score=163.58 Aligned_cols=90 Identities=28% Similarity=0.456 Sum_probs=73.6
Q ss_pred eEEEEEeecCC-CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 95 ISGVLYKWVNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 95 ~~G~L~K~~n~-~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
++|||.|+|.. .++||+|||||+++.|+||+++. ...|.
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~----------------------------------------d~~~~ 40 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPL----------------------------------------DAFAK 40 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCC----------------------------------------CcCcC
Confidence 48999999986 69999999999999999999762 12377
Q ss_pred eEEEeccc----eEEec-----CCC-CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVS----SIRDS-----KSD-DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 174 G~I~L~~s----si~~~-----~~d-~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
|+|.|..+ ++... ..+ ...|.|.|++|+|+|.|+|++||.+||+||+.|+.
T Consensus 41 G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 41 GEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPERKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred cEEEeeccccceeEeccCCccccccccceEEEEeCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 99999753 34321 111 23899999999999999999999999999999975
No 9
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.81 E-value=1.6e-19 Score=160.91 Aligned_cols=90 Identities=19% Similarity=0.347 Sum_probs=78.0
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|||.|+++..+.|++|||||+++.|+|||++.. ..|.
T Consensus 3 ~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~----------------------------------------~~~~ 42 (100)
T cd01233 3 SKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDKD----------------------------------------PVER 42 (100)
T ss_pred ceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCCC----------------------------------------ccEe
Confidence 589999999999999999999999999999998621 2367
Q ss_pred eEEEeccceEEecCC------CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKS------DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 174 G~I~L~~ssi~~~~~------d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
|.|+|..+.+..... .+..|.|.++.|+|+|+|+|++|+++||+||+...
T Consensus 43 ~~I~L~~~~v~~~~~~~~~~~~~~~F~I~t~~rt~~~~A~s~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 43 GVINLSTARVEHSEDQAAMVKGPNTFAVCTKHRGYLFQALSDKEMIDWLYALNPLY 98 (100)
T ss_pred eEEEecccEEEEccchhhhcCCCcEEEEECCCCEEEEEcCCHHHHHHHHHHhhhhh
Confidence 999999887765533 25689999999999999999999999999998764
No 10
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.79 E-value=4.4e-19 Score=158.20 Aligned_cols=89 Identities=24% Similarity=0.391 Sum_probs=74.1
Q ss_pred eEEEEEeecC---CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 95 ISGVLYKWVN---YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 95 ~~G~L~K~~n---~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
++|||.|+++ ++|.|++|||||+++.|+|||.+. ...+
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~---------------------------------------~~~~ 42 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKS---------------------------------------KDDP 42 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccC---------------------------------------ccCC
Confidence 6899999988 899999999999999999999752 1122
Q ss_pred CceEEEeccceE-EecCCC------CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006435 172 PFGEVHLKVSSI-RDSKSD------DKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 172 p~G~I~L~~ssi-~~~~~d------~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
+.|+|+|..|.. +..... +..|.|.|++|||+|+|+|++++++||++|+.|
T Consensus 43 ~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~rt~~l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 43 DDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred CCceEEcccceEEeeccccccccccCcEEEEEcCCceEEEEeCCHHHHHHHHHHHHhh
Confidence 459999998854 332211 368999999999999999999999999999976
No 11
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.77 E-value=1.8e-18 Score=152.98 Aligned_cols=88 Identities=30% Similarity=0.511 Sum_probs=71.5
Q ss_pred EEEEEeecCCCCCceeeEEEEe--CCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 96 SGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 96 ~G~L~K~~n~~KgWkrRWFVL~--~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
+|||.|+|+..+.||+|||||. ++.|+||+++. ..+|.
T Consensus 2 ~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~----------------------------------------~~~~~ 41 (101)
T cd01235 2 EGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFE----------------------------------------DTAEK 41 (101)
T ss_pred eEEEEEcCCCCCCccceEEEEECCCCEEEEecCCC----------------------------------------CCccc
Confidence 7999999999999999999997 56999999752 13477
Q ss_pred eEEEeccce-EEecC---------CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSS-IRDSK---------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 174 G~I~L~~ss-i~~~~---------~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
|.|+|..+. +.... .....|.|.+++|+|+|.|+|.+|+++||+||++++
T Consensus 42 g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 42 GCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTSKRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred eEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeCCceEEEECCCHHHHHHHHHHHHhhC
Confidence 999999754 33211 123457788999999999999999999999999864
No 12
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.77 E-value=1.7e-18 Score=156.04 Aligned_cols=91 Identities=26% Similarity=0.321 Sum_probs=72.3
Q ss_pred ceEEEEEeecCC-----CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccccc
Q 006435 94 GISGVLYKWVNY-----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (645)
Q Consensus 94 ~~~G~L~K~~n~-----~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (645)
+++|||+|++.. .++||+|||||+++.|+||+++. + .
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~--------~------------------------------~ 42 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDF--------E------------------------------K 42 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCc--------c------------------------------c
Confidence 368999999632 24899999999999999999752 1 1
Q ss_pred CCCCceEEEeccceEEec----C------CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006435 169 NRKPFGEVHLKVSSIRDS----K------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~----~------~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
..+|+|+|+|..+...+. . .+...|.|.+++|+|+|.|+|++||++||+||+.+
T Consensus 43 ~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i~t~~r~~yl~A~s~~er~~WI~ai~~~ 106 (106)
T cd01238 43 RGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQVVHDEGTLYVFAPTEELRKRWIKALKQV 106 (106)
T ss_pred ccCcceeEECCcceEEEEecCCcCcccccccCccEEEEeCCCeEEEEcCCHHHHHHHHHHHHhC
Confidence 134779999997754321 1 13567999999999999999999999999999864
No 13
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.76 E-value=6.4e-18 Score=145.62 Aligned_cols=90 Identities=49% Similarity=0.902 Sum_probs=78.7
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCce
Q 006435 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (645)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (645)
++|||+|+++..++|++|||||+++.|+||+++.. ....|.|
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~--------------------------------------~~~~~~~ 42 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSS--------------------------------------MRGKPRG 42 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCcc--------------------------------------CCCCceE
Confidence 68999999988899999999999999999998621 0023679
Q ss_pred EEEeccceEEecCCCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 006435 175 EVHLKVSSIRDSKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 175 ~I~L~~ssi~~~~~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
.|+|..+.+..+..+...|.|.++. ++|+|+|+|.+|+.+||.||+.|
T Consensus 43 ~i~l~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 43 TILLSGAVISEDDSDDKCFTIDTGGDKTLHLRANSEEERQRWVDALELA 91 (91)
T ss_pred EEEeceEEEEECCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHhC
Confidence 9999999887776668899999887 99999999999999999999875
No 14
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.74 E-value=6.2e-18 Score=147.12 Aligned_cols=86 Identities=36% Similarity=0.621 Sum_probs=75.5
Q ss_pred EEEEee-cCCCCCceeeEEEE--eCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 97 GVLYKW-VNYGKGWRPRWFVL--QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 97 G~L~K~-~n~~KgWkrRWFVL--~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
|||.|+ .+..+||++||||| ++|+|+||+++. + .+.+
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~--------~--------------------------------~~~r 40 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQN--------S--------------------------------GKLR 40 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCC--------C--------------------------------CeeE
Confidence 788887 78999999999999 999999999752 1 1346
Q ss_pred eEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
|+|+|..+.|..++ +.++|.|.+++.+|||+|.|.+|.+.||.||+.|+
T Consensus 41 Gsi~v~~a~is~~~-~~~~I~idsg~~i~hLKa~s~~~f~~Wv~aL~~a~ 89 (89)
T PF15409_consen 41 GSIDVSLAVISANK-KSRRIDIDSGDEIWHLKAKSQEDFQRWVSALQKAK 89 (89)
T ss_pred eEEEccceEEEecC-CCCEEEEEcCCeEEEEEcCCHHHHHHHHHHHHhcC
Confidence 99999999887654 67899999999999999999999999999999874
No 15
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.74 E-value=1.2e-17 Score=147.12 Aligned_cols=88 Identities=28% Similarity=0.490 Sum_probs=73.2
Q ss_pred eEEEEEeecCCC----CCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 95 ISGVLYKWVNYG----KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 95 ~~G~L~K~~n~~----KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
++|||+|++..+ +.|++|||||.++.|+||+++.. .
T Consensus 2 ~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~----------------------------------------~ 41 (96)
T cd01260 2 CDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQD----------------------------------------E 41 (96)
T ss_pred ceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCC----------------------------------------C
Confidence 689999997644 48999999999999999997621 2
Q ss_pred CCceEEEeccceEEecC--CCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLKVSSIRDSK--SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~--~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
+|.|.|+|..+.+.... .....|.|.++. |+|+|+|+|.+|+++||.||++|
T Consensus 42 ~~~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~~~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 42 KAEGLIFLSGFTIESAKEVKKKYAFKVCHPVYKSFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred ccceEEEccCCEEEEchhcCCceEEEECCCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 36799999988776542 235678898887 99999999999999999999875
No 16
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.73 E-value=1.4e-17 Score=149.62 Aligned_cols=88 Identities=25% Similarity=0.408 Sum_probs=70.1
Q ss_pred eEEEEEeec---------CCCCCceeeEEEEe-CCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccc
Q 006435 95 ISGVLYKWV---------NYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (645)
Q Consensus 95 ~~G~L~K~~---------n~~KgWkrRWFVL~-~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~ 164 (645)
.+|||.|.. ...|+||||||||. ++.|+||+++.
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~------------------------------------ 44 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEM------------------------------------ 44 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCC------------------------------------
Confidence 369999983 24789999999996 68888887541
Q ss_pred ccccCCCCceEEEeccceEEecCC----CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 006435 165 QRLLNRKPFGEVHLKVSSIRDSKS----DDKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (645)
Q Consensus 165 ~~~~~~kp~G~I~L~~ssi~~~~~----d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~ 221 (645)
...+|.|+|+|..|....... ....|.|.|++|+|+|.|+|++|+++||++|..
T Consensus 45 ---~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~tp~R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 45 ---PTTLPQGTIDMNQCTDVVDAEARTGQKFSICILTPDKEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred ---CCcccceEEEccceEEEeecccccCCccEEEEECCCceEEEEeCCHHHHHHHHHHHHh
Confidence 123578999999886554322 236799999999999999999999999999964
No 17
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.71 E-value=6.5e-17 Score=149.58 Aligned_cols=92 Identities=26% Similarity=0.492 Sum_probs=76.5
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCce
Q 006435 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (645)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (645)
++|||+|+++..+.|++|||||.++.|+||+++. ...|.|
T Consensus 2 k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~----------------------------------------~~~~~g 41 (125)
T cd01252 2 REGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTT----------------------------------------DKEPRG 41 (125)
T ss_pred cEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCC----------------------------------------CCCceE
Confidence 6899999999999999999999999999999752 123679
Q ss_pred EEEeccceEEecCC--CCccEEEEeCC---------------------eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 175 EVHLKVSSIRDSKS--DDKRFSIFTGT---------------------KRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 175 ~I~L~~ssi~~~~~--d~~~F~I~t~~---------------------rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
.|+|..+.|..... ....|.|.+++ ++|+|+|+|.+|+++||+||+.++..-
T Consensus 42 ~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~~ 116 (125)
T cd01252 42 IIPLENVSIREVEDPSKPFCFELFSPSDKQQIKACKTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISPN 116 (125)
T ss_pred EEECCCcEEEEcccCCCCeeEEEECCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 99999887766532 34568776644 689999999999999999999998754
No 18
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.70 E-value=1.1e-16 Score=143.17 Aligned_cols=90 Identities=23% Similarity=0.322 Sum_probs=71.7
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCC------eEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccc
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDG------VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g------~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~ 166 (645)
+.++|||.|+ |.||+|||||+++ .|.||+++.. . +
T Consensus 2 v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~----------~--~----------------------- 42 (101)
T cd01257 2 VRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKK----------F--L----------------------- 42 (101)
T ss_pred ccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhh----------c--c-----------------------
Confidence 4689999998 8999999999877 8999997521 0 0
Q ss_pred ccCCCCceEEEeccceEEecCCC---CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 006435 167 LLNRKPFGEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (645)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~~d---~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~ 221 (645)
....+|.|+|+|..|.......+ ...|.|.|++|+|+|.|+|++|+++||++|..
T Consensus 43 ~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~t~dr~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 43 QKGSAPKRVIPLESCFNINKRADAKHRHLIALYTRDEYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred ccCCCceEEEEccceEEEeeccccccCeEEEEEeCCceEEEEeCCHHHHHHHHHHHhh
Confidence 11245899999999854432222 46788999999999999999999999999964
No 19
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.70 E-value=7.4e-17 Score=145.67 Aligned_cols=87 Identities=30% Similarity=0.379 Sum_probs=69.6
Q ss_pred EEEEEeecCCCC----CceeeEEEEeCCe-------EEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccc
Q 006435 96 SGVLYKWVNYGK----GWRPRWFVLQDGV-------LSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (645)
Q Consensus 96 ~G~L~K~~n~~K----gWkrRWFVL~~g~-------LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~ 164 (645)
+|||.|++...+ .||+|||||+++. |+||+++.
T Consensus 2 eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~------------------------------------ 45 (108)
T cd01266 2 EGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSR------------------------------------ 45 (108)
T ss_pred ceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCC------------------------------------
Confidence 799999988544 9999999998765 69999752
Q ss_pred ccccCCCCceEEEeccceEEecC----CCC----ccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006435 165 QRLLNRKPFGEVHLKVSSIRDSK----SDD----KRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 165 ~~~~~~kp~G~I~L~~ssi~~~~----~d~----~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
..+|.|+|.|..+...... ... ..|.|.++.|+|+|.|+|++|+++||.||+..
T Consensus 46 ----~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 46 ----KFKLEFVIDLESCSQVDPGLLCTAGNCIFGYGFDIETIVRDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred ----CCccceEEECCccEEEcccccccccCcccceEEEEEeCCccEEEEECCHHHHHHHHHHHHhh
Confidence 2347899999987654321 112 23889999999999999999999999999763
No 20
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.67 E-value=3.2e-16 Score=135.84 Aligned_cols=90 Identities=30% Similarity=0.591 Sum_probs=73.8
Q ss_pred eEEEEEeecCC-CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 95 ISGVLYKWVNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 95 ~~G~L~K~~n~-~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
++|||.|++.. .++|++|||||.++.|.||+++.. ....+.
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~--------------------------------------~~~~~~ 42 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKD--------------------------------------YDNAHV 42 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCcc--------------------------------------cccccc
Confidence 58999999865 788999999999999999997521 012256
Q ss_pred eEEEeccceEEecCC---CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKS---DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 174 G~I~L~~ssi~~~~~---d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
+.|+|..+++..... ....|.|.+++++|+|+|+|.+|+++||.||+.+
T Consensus 43 ~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~f~a~s~~~~~~Wi~al~~~ 94 (94)
T cd01250 43 KEIDLRRCTVRHNGKQPDRRFCFEVISPTKTWHFQADSEEERDDWISAIQES 94 (94)
T ss_pred eEEeccceEEecCccccCCceEEEEEcCCcEEEEECCCHHHHHHHHHHHhcC
Confidence 899999887765433 3567999999999999999999999999999863
No 21
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.64 E-value=1.4e-15 Score=136.18 Aligned_cols=93 Identities=28% Similarity=0.459 Sum_probs=66.3
Q ss_pred ceEEEEEeecCCCCCceeeEEEEe-CCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~-~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
.++|||.|+++..+.||+|||||+ ++.|.||+++..+. + ....|
T Consensus 2 ~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~~~-------~----------------------------~~~i~ 46 (102)
T cd01241 2 VKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPEDG-------D----------------------------PFLPP 46 (102)
T ss_pred cEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCCcc-------C----------------------------ccccc
Confidence 589999999999999999999998 89999999752110 0 00113
Q ss_pred ceEEEeccceEEe-cCCCCccEEEE------eCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIRD-SKSDDKRFSIF------TGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 173 ~G~I~L~~ssi~~-~~~d~~~F~I~------t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
.+.+.|..|.+.. .......|.|. +..|+| .|+|++||++||+||+.++
T Consensus 47 l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~~~~~r~f--~a~s~ee~~eWi~ai~~v~ 102 (102)
T cd01241 47 LNNFSVAECQLMKTERPRPNTFIIRCLQWTTVIERTF--HVESPEEREEWIHAIQTVA 102 (102)
T ss_pred cCCeEEeeeeeeeccCCCcceEEEEeccCCcccCEEE--EeCCHHHHHHHHHHHHhhC
Confidence 3445555555532 23335689987 234655 5999999999999998863
No 22
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.60 E-value=2e-15 Score=134.18 Aligned_cols=85 Identities=25% Similarity=0.312 Sum_probs=72.4
Q ss_pred EEEEEeecCC-CCCceeeEEEEeC----CeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 96 SGVLYKWVNY-GKGWRPRWFVLQD----GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 96 ~G~L~K~~n~-~KgWkrRWFVL~~----g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
.|||.|+|+. .|.||+|||+|.+ +.|+||+.+.. .
T Consensus 2 ~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~----------------------------------------~ 41 (98)
T cd01245 2 KGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKK----------------------------------------T 41 (98)
T ss_pred CCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCC----------------------------------------C
Confidence 5999999887 9999999999976 99999997631 2
Q ss_pred CCceEEEeccceEEecCC----CCccEEEEeCCe--EEEEEcCCHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLKVSSIRDSKS----DDKRFSIFTGTK--RLHLRAETREDRFAWMEALQA 221 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~~----d~~~F~I~t~~r--t~~L~AeS~~dr~~WI~AL~~ 221 (645)
+|.|.|+|..+.|++..+ .+.+|.|.++.+ +|+++|++ +||++||++|+.
T Consensus 42 ~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 42 KPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERALPTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred CccceeeccccEEEEccccccCCCeEEEEecCCCCeEEEEeCCH-HHHHHHHHHHhc
Confidence 378999999998887432 357899998875 99999999 999999999985
No 23
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.58 E-value=2e-14 Score=124.36 Aligned_cols=93 Identities=32% Similarity=0.487 Sum_probs=78.6
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|||.|++...++|++|||||.++.|+||+.... .....|.
T Consensus 2 ~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~-------------------------------------~~~~~~~ 44 (104)
T PF00169_consen 2 IKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKD-------------------------------------KSDSKPK 44 (104)
T ss_dssp EEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTT-------------------------------------TTESSES
T ss_pred EEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCcc-------------------------------------ccceeee
Confidence 589999999988999999999999999999997621 0123477
Q ss_pred eEEEeccceEEecCC--------CCccEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKS--------DDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 174 G~I~L~~ssi~~~~~--------d~~~F~I~t~~r-t~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
+.|+|..+.+..... ....|.|.++.+ +|+|+|+|++++.+||++|+.|.
T Consensus 45 ~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 45 GSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGKSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEecCceEEEcCccccccccCCCcEEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 999999998876432 357899998875 99999999999999999999985
No 24
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.57 E-value=1.2e-14 Score=129.43 Aligned_cols=85 Identities=16% Similarity=0.164 Sum_probs=66.9
Q ss_pred EEEEeecC----CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 97 GVLYKWVN----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 97 G~L~K~~n----~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
|.|.|+.. ..+.||+|||+|.++.|+||+.+. .+|
T Consensus 5 ~~~~kr~~~~~~~~~n~KkRwF~Lt~~~L~Y~k~~~-----------------------------------------~~~ 43 (98)
T cd01244 5 LQQVDRSRLAWKKVLHFKKRYFQLTTTHLSWAKDVQ-----------------------------------------CKK 43 (98)
T ss_pred cEEEEcccCCCccCcCCceeEEEECCCEEEEECCCC-----------------------------------------Cce
Confidence 56677652 346899999999999999999642 347
Q ss_pred ceEEEeccceEEec-CC----CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIRDS-KS----DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 173 ~G~I~L~~ssi~~~-~~----d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
.|+|+|......+. .. ....|.|.++.|+|+|+|+|++||++||+||+.+
T Consensus 44 ~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi~al~k~ 98 (98)
T cd01244 44 SALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPVEATDWLNALEKQ 98 (98)
T ss_pred eeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHHHHHHHHHHHhcC
Confidence 79999986644322 11 2357999999999999999999999999999864
No 25
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.50 E-value=2.2e-13 Score=121.84 Aligned_cols=96 Identities=16% Similarity=0.193 Sum_probs=79.3
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|||.|.+...++||+|||.|-+++|-|++.+... .....+++
T Consensus 3 ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~-----------------------------------~~~~y~~~ 47 (101)
T cd01219 3 LKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMI-----------------------------------GGSKFKVR 47 (101)
T ss_pred ccceEEEEEecCCCCceeEEEEEeCCEEEEEEccccc-----------------------------------CCCcEEEE
Confidence 4799999999999999999999988899999964100 01223467
Q ss_pred eEEEeccceEEecC--CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSK--SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 174 G~I~L~~ssi~~~~--~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
+.|+|....|.... ...+.|.|.+..|+|+|.|+|++|+.+||+||+.|++
T Consensus 48 ~~i~l~~~~v~~~~~~~~~~~F~I~~~~rsf~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 48 ARIDVSGMQVCEGDNLERPHSFLVSGKQRCLELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred EEEecccEEEEeCCCCCcCceEEEecCCcEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 89999988887542 2368899999999999999999999999999999985
No 26
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.45 E-value=3.3e-13 Score=124.57 Aligned_cols=92 Identities=22% Similarity=0.416 Sum_probs=69.1
Q ss_pred ceEEEEEe-e-cCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 94 GISGVLYK-W-VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 94 ~~~G~L~K-~-~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
...|||.- + ++..|.|+||||||+++.|+||+.+.. .....
T Consensus 2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d-------------------------------------~~~~~ 44 (122)
T cd01263 2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDD-------------------------------------EKRKG 44 (122)
T ss_pred ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCc-------------------------------------cccCC
Confidence 46799984 4 678899999999999999999997621 01234
Q ss_pred CceEEEeccceEEec-------CCCCccEEEEe--CC-----------------eE-EEEEcCCHHHHHHHHHHHHHH
Q 006435 172 PFGEVHLKVSSIRDS-------KSDDKRFSIFT--GT-----------------KR-LHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 172 p~G~I~L~~ssi~~~-------~~d~~~F~I~t--~~-----------------rt-~~L~AeS~~dr~~WI~AL~~a 222 (645)
|.|.|+|..|.+... ....+.|.|.+ ++ |+ +.|.|+|.+||++||.||+.|
T Consensus 45 Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 45 PTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRPKMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred ceEEEEhhhCcccccccCChhhcCCCCeEEEEEecccccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 889999998876433 22346687743 22 44 568999999999999999864
No 27
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.44 E-value=4.5e-13 Score=120.01 Aligned_cols=81 Identities=26% Similarity=0.559 Sum_probs=62.9
Q ss_pred CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCceEEEeccceEE
Q 006435 105 YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIR 184 (645)
Q Consensus 105 ~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi~ 184 (645)
..|+||+|||+|+++.|+|||++. + ....|.+.|+|..|.+.
T Consensus 16 ~~K~~KrrwF~lk~~~L~YyK~ke--------e------------------------------~~~~p~i~lnl~gcev~ 57 (106)
T cd01237 16 TLKGYKQYWFTFRDTSISYYKSKE--------D------------------------------SNGAPIGQLNLKGCEVT 57 (106)
T ss_pred hhhhheeEEEEEeCCEEEEEccch--------h------------------------------cCCCCeEEEecCceEEc
Confidence 368899999999999999999862 1 11236688888888887
Q ss_pred ecCC-CCccEE--EEeCC----eEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 185 DSKS-DDKRFS--IFTGT----KRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 185 ~~~~-d~~~F~--I~t~~----rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
++.. ....|. +.++. |+|+|+|+|++++++||+|++.|.
T Consensus 58 ~dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya~Wmaa~rlas 103 (106)
T cd01237 58 PDVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYAKWMAACRLAS 103 (106)
T ss_pred ccccccccceEEEEecCCccCCeEEEEECCCHHHHHHHHHHHHHhh
Confidence 6531 133455 45655 999999999999999999999874
No 28
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.41 E-value=6.8e-13 Score=134.84 Aligned_cols=97 Identities=26% Similarity=0.501 Sum_probs=78.6
Q ss_pred CCCceEEEEEeecC-CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 91 VGNGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 91 ~~~~~~G~L~K~~n-~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
..+..+|||.|.++ ..|.||||||+|.+++||||.--. .
T Consensus 258 fnpdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tT----------------------------------------D 297 (395)
T KOG0930|consen 258 FNPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTT----------------------------------------D 297 (395)
T ss_pred cCccccceeeeecCCcccchhheeEEeecceeeeeeecc----------------------------------------C
Confidence 35689999999964 889999999999999999998642 1
Q ss_pred CCCceEEEeccceEEec--CCCCccEEEEeC----------------------CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 170 RKPFGEVHLKVSSIRDS--KSDDKRFSIFTG----------------------TKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~~~--~~d~~~F~I~t~----------------------~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
..|+|.|.|..-+|+.. +..+.+|.|+.+ ...|.+.|.+.+|+.+||++|++++..
T Consensus 298 KEPrGIIpLeNlsir~VedP~kP~cfEly~ps~~gq~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is~ 377 (395)
T KOG0930|consen 298 KEPRGIIPLENLSIREVEDPKKPNCFELYIPSNKGQVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAISR 377 (395)
T ss_pred CCCCcceeccccceeeccCCCCCCeEEEecCCCCcCeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhcc
Confidence 23789999999999864 334567776542 246999999999999999999999885
Q ss_pred cc
Q 006435 226 FP 227 (645)
Q Consensus 226 ~~ 227 (645)
-|
T Consensus 378 ~P 379 (395)
T KOG0930|consen 378 DP 379 (395)
T ss_pred Cc
Confidence 44
No 29
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.39 E-value=1.4e-12 Score=120.33 Aligned_cols=88 Identities=16% Similarity=0.399 Sum_probs=65.7
Q ss_pred eEEEEEeecCC-----C-C------------CceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhc
Q 006435 95 ISGVLYKWVNY-----G-K------------GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKR 156 (645)
Q Consensus 95 ~~G~L~K~~n~-----~-K------------gWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~ 156 (645)
++||++|+++. . . .|++|||||+++.|.||+++..
T Consensus 1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~~--------------------------- 53 (121)
T cd01254 1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPSS--------------------------- 53 (121)
T ss_pred CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCCC---------------------------
Confidence 47999998532 1 1 6999999999999999997521
Q ss_pred ccccccccccccCCCCceEEEeccc-eEEecC--------------CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 006435 157 KHKKETTSQRLLNRKPFGEVHLKVS-SIRDSK--------------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (645)
Q Consensus 157 ~~~~~~~~~~~~~~kp~G~I~L~~s-si~~~~--------------~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~ 221 (645)
.+|.|+|.|... .|.... .....|.|.+++|+|.|.|+|..++++||++|+.
T Consensus 54 -------------~~~~~vil~D~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~ 120 (121)
T cd01254 54 -------------AQILDVILFDVDFKVNGGGKEDISLAVELKDITGLRHGLKITNSNRSLKLKCKSSRKLKQWMASIED 120 (121)
T ss_pred -------------CceeeEEEEcCCccEEeCCcccccccccccccCCCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 125566666432 222211 2245788999999999999999999999999987
Q ss_pred H
Q 006435 222 V 222 (645)
Q Consensus 222 a 222 (645)
|
T Consensus 121 a 121 (121)
T cd01254 121 A 121 (121)
T ss_pred C
Confidence 5
No 30
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.36 E-value=1e-11 Score=105.37 Aligned_cols=93 Identities=32% Similarity=0.528 Sum_probs=76.8
Q ss_pred ceEEEEEeecC-CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 94 GISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 94 ~~~G~L~K~~n-~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
.++|||.++.. ....|++|||+|.++.|.||+.... .....+
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~-------------------------------------~~~~~~ 44 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKA-------------------------------------KKDYKP 44 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCc-------------------------------------cccCCC
Confidence 48999999987 6778999999999999999997521 001336
Q ss_pred ceEEEeccceEEecCC-----CCccEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIRDSKS-----DDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~~-----d~~~F~I~t~~r-t~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
.+.|+|..+.+..... ....|.|.++++ +|+|+|+|++|+..|+.+|+.++
T Consensus 45 ~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~~~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 45 KGSIDLSGITVREAPDPDSAKKPHCFEIKTADRRSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred ceEEECCcCEEEeCCCCccCCCceEEEEEecCCceEEEEcCCHHHHHHHHHHHHHhh
Confidence 6999999987776543 367899988887 99999999999999999999875
No 31
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.28 E-value=2.2e-11 Score=108.70 Aligned_cols=90 Identities=20% Similarity=0.308 Sum_probs=64.9
Q ss_pred eEEEEEee-c-------CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccc
Q 006435 95 ISGVLYKW-V-------NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (645)
Q Consensus 95 ~~G~L~K~-~-------n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~ 166 (645)
++|||..+ . ...+.|++|||||.++.|+||++++...
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~~----------------------------------- 45 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMAA----------------------------------- 45 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcccc-----------------------------------
Confidence 47888843 2 1456899999999999999999763100
Q ss_pred ccCCCCce--EEEeccceEEecC---CCCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHH
Q 006435 167 LLNRKPFG--EVHLKVSSIRDSK---SDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 167 ~~~~kp~G--~I~L~~ssi~~~~---~d~~~F~I~t-~~rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
..+.| .|+|..+.|.... .....|.|.+ ++++|+|+|+|.+|+++||.||+++
T Consensus 46 ---~~~~~~~~i~l~~~~i~~~~~~~k~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~aL~~~ 104 (104)
T cd01253 46 ---ENVHGEPPVDLTGAQCEVASDYTKKKHVFRLRLPDGAEFLFQAPDEEEMSSWVRALKSA 104 (104)
T ss_pred ---cCCCCCCcEeccCCEEEecCCcccCceEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 00113 6777766665442 2346788864 5699999999999999999999864
No 32
>KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms]
Probab=99.23 E-value=7.2e-12 Score=135.12 Aligned_cols=93 Identities=41% Similarity=0.762 Sum_probs=85.4
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.+.|+|.||.||..||+.|||||.+|.|+||++. .+.+.|||
T Consensus 25 e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse--------~E~~hGcR------------------------------ 66 (611)
T KOG1739|consen 25 ERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSE--------DETEHGCR------------------------------ 66 (611)
T ss_pred hhcceeeeeecccccccceEEEEcccchhhhhhh--------hhhhcccc------------------------------
Confidence 6899999999999999999999999999999986 34444444
Q ss_pred eEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
|.|.|+.+.|.....|.++|.|.++...++|+|.+...++.|+++|+--+.
T Consensus 67 gsi~l~ka~i~ahEfDe~rfdIsvn~nv~~lra~~~~hr~~w~d~L~wmk~ 117 (611)
T KOG1739|consen 67 GSICLSKAVITAHEFDECRFDISVNDNVWYLRAQDPDHRQQWIDALEWMKT 117 (611)
T ss_pred eeeEeccCCcccccchhheeeeEeccceeeehhcCcHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999998776
No 33
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.22 E-value=1e-10 Score=104.46 Aligned_cols=93 Identities=22% Similarity=0.317 Sum_probs=68.5
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|+|.|.+.. +.|+|+||.+.| +|-|+.....+ ....+++
T Consensus 3 ikEG~L~K~~~k-~~~~R~~FLFnD-~LlY~~~~~~~------------------------------------~~~y~~~ 44 (99)
T cd01220 3 IRQGCLLKLSKK-GLQQRMFFLFSD-LLLYTSKSPTD------------------------------------QNSFRIL 44 (99)
T ss_pred eeEEEEEEEeCC-CCceEEEEEccc-eEEEEEeecCC------------------------------------CceEEEE
Confidence 479999998763 346655555555 55555532100 0112367
Q ss_pred eEEEeccceEEecCCC---CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
|.|+|....|+....+ .+.|.|.++.|.|.|.|.|++|+.+||++|+.|++
T Consensus 45 ~~i~L~~~~V~~~~~~~~~~~~F~I~~~~ks~~l~A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 45 GHLPLRGMLTEESEHEWGVPHCFTIFGGQCAITVAASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred EEEEcCceEEeeccCCcCCceeEEEEcCCeEEEEECCCHHHHHHHHHHHHHHhh
Confidence 9999999888764432 57899999999999999999999999999999986
No 34
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.22 E-value=5.5e-11 Score=99.96 Aligned_cols=91 Identities=37% Similarity=0.625 Sum_probs=74.4
Q ss_pred eEEEEEeecCCC-CCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 95 ISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 95 ~~G~L~K~~n~~-KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
++|||.++.... ..|++|||+|.++.|.||+..... ....+.
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~-------------------------------------~~~~~~ 43 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSK-------------------------------------KSYKPK 43 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCC-------------------------------------cCCCCc
Confidence 479999997665 789999999999999999965210 013467
Q ss_pred eEEEeccceEEecCCC---CccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
+.|+|..+.+...... ...|.|.+.. +.|+|+|+|.+|+..|+.+|+.+
T Consensus 44 ~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~l~~~ 96 (96)
T cd00821 44 GSIPLSGAEVEESPDDSGRKNCFEIRTPDGRSYLLQAESEEEREEWIEALQSA 96 (96)
T ss_pred ceEEcCCCEEEECCCcCCCCcEEEEecCCCcEEEEEeCCHHHHHHHHHHHhcC
Confidence 9999999888766543 6789998877 99999999999999999999864
No 35
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.11 E-value=8.2e-10 Score=93.49 Aligned_cols=87 Identities=31% Similarity=0.537 Sum_probs=69.1
Q ss_pred EEEEEeecCCC----CCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 96 SGVLYKWVNYG----KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 96 ~G~L~K~~n~~----KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
+|||.+++... +.|++|||+|.++.|.||+.+.. ..
T Consensus 2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~----------------------------------------~~ 41 (99)
T cd00900 2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDK----------------------------------------KE 41 (99)
T ss_pred ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCC----------------------------------------Cc
Confidence 69999997654 78999999999999999997521 00
Q ss_pred Cc-eEEEeccceEEecCC---CCccEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHH
Q 006435 172 PF-GEVHLKVSSIRDSKS---DDKRFSIFTG---TKRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 172 p~-G~I~L~~ssi~~~~~---d~~~F~I~t~---~rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
+. +.++|....+..... .+..|.|.+. .+.|+|+|+|.+|++.||+||+.|
T Consensus 42 ~~~~~~~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 42 IKPGSIPLSEISVEEDPDGSDDPNCFAIVTKDRGRRVFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred CCCCEEEccceEEEECCCCCCCCceEEEECCCCCcEEEEEEcCCHHHHHHHHHHHhcC
Confidence 11 567777666555443 3688999887 899999999999999999999864
No 36
>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]
Probab=99.06 E-value=5.1e-11 Score=136.29 Aligned_cols=90 Identities=31% Similarity=0.464 Sum_probs=73.2
Q ss_pred ceEEEEEeecCCCCCceeeEEEE--eCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVL--QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL--~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
+-+|||||+|...|+|+.||||| ....|+||.+. ...+
T Consensus 1635 ~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~----------------------------------------edt~ 1674 (1732)
T KOG1090|consen 1635 IPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDF----------------------------------------EDTK 1674 (1732)
T ss_pred CcccchhhcchhhcccccceeEecCCccceeeeccc----------------------------------------cccc
Confidence 35999999999999999999999 45789999975 1234
Q ss_pred CceEEEeccc-e---EEecCCCC-ccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 172 PFGEVHLKVS-S---IRDSKSDD-KRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 172 p~G~I~L~~s-s---i~~~~~d~-~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
|+|+|+|..- + +.+...|. ..|.+.|..|+|.|.|.+....++|++.|+++.
T Consensus 1675 pkG~IdLaevesv~~~~~k~vdekgffdlktt~rvynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1675 PKGCIDLAEVESVALIGPKTVDEKGFFDLKTTNRVYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred ccchhhhhhhhhhcccCccccCccceeeeehhhHHHHHHhccchHHHHHHHHHHHhh
Confidence 7799999732 2 33334444 456799999999999999999999999999875
No 37
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.92 E-value=1.1e-08 Score=94.22 Aligned_cols=99 Identities=15% Similarity=0.244 Sum_probs=71.2
Q ss_pred eEEEEEeec-----C----C-CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccc
Q 006435 95 ISGVLYKWV-----N----Y-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (645)
Q Consensus 95 ~~G~L~K~~-----n----~-~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~ 164 (645)
++|+|..+- + . .+.|++||.||+++.|+.||++......
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~------------------------------- 50 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKS------------------------------- 50 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccc-------------------------------
Confidence 468887652 1 1 2479999999999999999986321000
Q ss_pred ccccCCCCceEEEeccceEEec---CCCCccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 165 QRLLNRKPFGEVHLKVSSIRDS---KSDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 165 ~~~~~~kp~G~I~L~~ssi~~~---~~d~~~F~I~t~-~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
.........|.|..+...+. ......|.|.++ ++.|.|+|.+.+|++.||.+|+.+.+.+
T Consensus 51 --~~~~~~~~~Isi~~a~~~ia~dy~Kr~~VF~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~~~ 114 (117)
T cd01230 51 --LSETELKNAISIHHALATRASDYSKKPHVFRLRTADWREFLFQTSSLKELQSWIERINVVAAAF 114 (117)
T ss_pred --cccccccceEEeccceeEeeccccCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 00011236788887764433 223577899987 5999999999999999999999999876
No 38
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.81 E-value=1.7e-08 Score=90.84 Aligned_cols=89 Identities=22% Similarity=0.235 Sum_probs=66.2
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCC-eEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDG-VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g-~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
..++|++.|+.+.+ +|+|||+|.++ .|.|+...+ . .
T Consensus 13 Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~---------------------------------------~--~ 49 (104)
T PF14593_consen 13 ILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKK---------------------------------------M--V 49 (104)
T ss_dssp EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTT---------------------------------------T--E
T ss_pred EEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCC---------------------------------------C--e
Confidence 36899999998877 89999999887 888888531 0 1
Q ss_pred CceEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 172 PFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
-+|+|++..+. .+...+...|.|.|++|+|+|... ..+...|+++|+.++..+
T Consensus 50 ~KGeI~~~~~l-~v~~k~~~~F~I~tp~RtY~l~d~-~~~A~~W~~~I~~~~~~~ 102 (104)
T PF14593_consen 50 LKGEIPWSKEL-SVEVKSFKTFFIHTPKRTYYLEDP-EGNAQQWVEAIEEVKKQY 102 (104)
T ss_dssp EEEEE--STT--EEEECSSSEEEEEETTEEEEEE-T-TS-HHHHHHHHHHHHHHH
T ss_pred ECcEEecCCce-EEEEccCCEEEEECCCcEEEEECC-CCCHHHHHHHHHHHHHHh
Confidence 23999998542 222345679999999999999884 566889999999998754
No 39
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.81 E-value=6e-09 Score=109.28 Aligned_cols=99 Identities=27% Similarity=0.448 Sum_probs=70.8
Q ss_pred CceEEEEEeecCCCCCceeeEEEE-eCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL-~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
+.++|||+|+|.+.|.||+|||+| .||.|-=|+.+- ++. +....
T Consensus 15 vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP-------~~~----------------------------~~~p~ 59 (516)
T KOG0690|consen 15 VVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKP-------KEV----------------------------QPTPE 59 (516)
T ss_pred hHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCC-------ccC----------------------------CCCcc
Confidence 379999999999999999999999 789999898751 110 11112
Q ss_pred CceEEEeccceE-EecCCCCccEEEEeC------CeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 172 PFGEVHLKVSSI-RDSKSDDKRFSIFTG------TKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 172 p~G~I~L~~ssi-~~~~~d~~~F~I~t~------~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
|..-..++.|.+ ...+..+..|.|.+- .||| .++|+++|++|++||+++.....+
T Consensus 60 pLNnF~v~~cq~m~~erPrPntFiiRcLQWTTVIERTF--~ves~~eRq~W~~AIq~vsn~l~q 121 (516)
T KOG0690|consen 60 PLNNFMVRDCQTMKTERPRPNTFIIRCLQWTTVIERTF--YVESAEERQEWIEAIQAVSNRLKQ 121 (516)
T ss_pred cccchhhhhhhhhhccCCCCceEEEEeeeeeeeeeeee--ecCCHHHHHHHHHHHHHHhhhhhh
Confidence 334444444433 233455778887653 3555 579999999999999999877655
No 40
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.81 E-value=4.7e-08 Score=88.13 Aligned_cols=94 Identities=23% Similarity=0.237 Sum_probs=74.8
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
..+|-|.|-. .|+-+.|+|.|=+++|-|-+.- ++ ....+..
T Consensus 5 i~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~~~-----------------~~--------------------~~~~~~~ 45 (104)
T cd01218 5 VGEGVLTKMC--RKKPKQRQFFLFNDILVYGNIV-----------------IS--------------------KKKYNKQ 45 (104)
T ss_pred EecCcEEEee--cCCCceEEEEEecCEEEEEEee-----------------cC--------------------CceeeEe
Confidence 4789999987 6778999999999999996531 00 1122345
Q ss_pred eEEEeccceEEecCCC---CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 174 GEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+.|+|....|....++ .+.|.|.++.|+|.+.|+|++|+.+||++|+.|++.+
T Consensus 46 ~~i~L~~~~v~~~~d~~~~~n~f~I~~~~kSf~v~A~s~~eK~eWl~~i~~ai~~~ 101 (104)
T cd01218 46 HILPLEGVQVESIEDDGIERNGWIIKTPTKSFAVYAATETEKREWMLHINKCVTDL 101 (104)
T ss_pred eEEEccceEEEecCCcccccceEEEecCCeEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 8899998877654332 5789999999999999999999999999999999865
No 41
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.79 E-value=3.8e-08 Score=86.60 Aligned_cols=89 Identities=29% Similarity=0.387 Sum_probs=68.8
Q ss_pred ceEEEEEee-cCCCC-CceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 94 GISGVLYKW-VNYGK-GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 94 ~~~G~L~K~-~n~~K-gWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
+..|||.-. .+.+| |=|+|||||.+.+|+|||... | ..
T Consensus 2 irkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~e--------e--------------------------------KE 41 (110)
T cd01256 2 IRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDE--------E--------------------------------KE 41 (110)
T ss_pred eeeeeEEeeccceecCCCcceEEEEecceeeeecccc--------c--------------------------------cc
Confidence 578999876 34444 589999999999999999751 1 12
Q ss_pred CceEEEeccceEEecCC----CCccEEEEeC--------CeEEEEEcCCHHHHHHHHHHHHHH
Q 006435 172 PFGEVHLKVSSIRDSKS----DDKRFSIFTG--------TKRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 172 p~G~I~L~~ssi~~~~~----d~~~F~I~t~--------~rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
|+|.|+|..-.++.... ....|.++.+ .|++.|.|+|.+|...|...+-.|
T Consensus 42 ~kyilpLdnLk~Rdve~gf~sk~~~FeLfnpd~rnvykd~k~lel~~~~~e~vdswkasflra 104 (110)
T cd01256 42 KKYMLPLDGLKLRDIEGGFMSRNHKFALFYPDGRNVYKDYKQLELGCETLEEVDSWKASFLRA 104 (110)
T ss_pred ccceeeccccEEEeecccccCCCcEEEEEcCcccccccchheeeecCCCHHHHHHHHHHHHhc
Confidence 67999999888875432 3567888754 378999999999999999877654
No 42
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.65 E-value=1.2e-07 Score=85.03 Aligned_cols=48 Identities=33% Similarity=0.512 Sum_probs=41.4
Q ss_pred eEEEeccceEEecCCCCccEE--EEeCCe--EEEEEcCCHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKSDDKRFS--IFTGTK--RLHLRAETREDRFAWMEALQA 221 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~--I~t~~r--t~~L~AeS~~dr~~WI~AL~~ 221 (645)
-.|.|+.|+++..+..++||+ |.+.++ ++.|+|+|+.|+..||+|+..
T Consensus 52 e~~~l~sc~~r~~~~~dRRFCFei~~~~~~~~~~lQA~Se~~~~~Wi~A~dg 103 (104)
T cd01249 52 ETLTLKSCSRRKTESIDKRFCFDVEVEEKPGVITMQALSEKDRRLWIEAMDG 103 (104)
T ss_pred eEEeeeeccccccCCccceeeEeeeecCCCCeEEEEecCHHHHHHHHHhhcC
Confidence 347889999999888888876 777777 899999999999999999863
No 43
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.58 E-value=1e-07 Score=84.56 Aligned_cols=88 Identities=22% Similarity=0.411 Sum_probs=60.8
Q ss_pred eEEEEEeecC-CCCCceeeEEEEeCCeEEE------EEecCCCccccchhhhccceeeccchhhhhhhcccccccccccc
Q 006435 95 ISGVLYKWVN-YGKGWRPRWFVLQDGVLSY------YKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (645)
Q Consensus 95 ~~G~L~K~~n-~~KgWkrRWFVL~~g~LsY------Yk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~ 167 (645)
.+|||+|.|+ ..|.||+|||||. ++--| |+.+
T Consensus 4 ~sGyL~k~Gg~~~KkWKKRwFvL~-qvsQYtfamcsy~ek---------------------------------------- 42 (117)
T cd01234 4 HCGYLYAIGKNVWKKWKKRFFVLV-QVSQYTFAMCSYREK---------------------------------------- 42 (117)
T ss_pred eeEEEEeccchhhhhhheeEEEEE-chhHHHHHHHhhhhh----------------------------------------
Confidence 7899999987 8999999999998 33222 2322
Q ss_pred cCCCCceEEEeccceEEecC-------------CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 168 LNRKPFGEVHLKVSSIRDSK-------------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~~~-------------~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
...|.-.|.|.+-+|.-.. .....|..+-.+.+..|..+++.||.-||+||-.|-.
T Consensus 43 -ks~P~e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~ff~avkegd~~~fa~~de~~r~lwvqa~yratg 111 (117)
T cd01234 43 -KAEPTEFIQLDGYTVDYMPESDPDPNSELSLQGGRHFFNAVKEGDELKFATDDENERHLWVQAMYRATG 111 (117)
T ss_pred -cCCchhheeecceEEeccCCCCCCcccccccccchhhhheeccCcEEEEeccchHHHHHHHHHHHHHcC
Confidence 2224456666665553211 1123345566678899999999999999999987754
No 44
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.56 E-value=5.3e-07 Score=82.51 Aligned_cols=99 Identities=23% Similarity=0.256 Sum_probs=65.8
Q ss_pred CCceEEEEEee--cCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 92 GNGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 92 ~~~~~G~L~K~--~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
|+.++|||.-- ++..+||+++|.||.+..|+.|....+..-. ..
T Consensus 1 gt~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~----------------------------------p~ 46 (122)
T cd01243 1 GTAYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQ----------------------------------PS 46 (122)
T ss_pred CccceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCC----------------------------------cc
Confidence 56899999643 5666899999999999999999975211000 00
Q ss_pred CCCceEEEec----------cc-eEEecCCC-CccEEEEe-------CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 170 RKPFGEVHLK----------VS-SIRDSKSD-DKRFSIFT-------GTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 170 ~kp~G~I~L~----------~s-si~~~~~d-~~~F~I~t-------~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
..|.=.|+|. .+ .|..++.| ++-|.|.+ +..+.+|-|+|..|+++|+.||.....
T Consensus 47 ~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l~~ 120 (122)
T cd01243 47 VVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSELHK 120 (122)
T ss_pred CceeEEEEcCCCCEEEEEecHHHccccCcccCCeEEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHHHh
Confidence 0011222331 11 12223333 67788765 358999999999999999999987654
No 45
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.52 E-value=3.8e-08 Score=115.69 Aligned_cols=98 Identities=31% Similarity=0.450 Sum_probs=80.1
Q ss_pred CCCceEEEEEeec-CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 91 VGNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 91 ~~~~~~G~L~K~~-n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
.+..+.|||+|+. +..+.|+||||-.+++.|.|+.....
T Consensus 272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~---------------------------------------- 311 (785)
T KOG0521|consen 272 LGYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGAD---------------------------------------- 311 (785)
T ss_pred chhhhhhhhhhhcccchhhHHhhhhhhhcccccccccccc----------------------------------------
Confidence 3457889999985 56889999999999999999985310
Q ss_pred CCCceEEEeccceEEecCCC-C--ccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 170 RKPFGEVHLKVSSIRDSKSD-D--KRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~d-~--~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
......++|..|+++..+.. + ++|.|++++|+|+|+|+|+.|+++||.+|+.++.....
T Consensus 312 ~~~~~~~dL~~csvk~~~~~~drr~CF~iiS~tks~~lQAes~~d~~~Wi~~i~nsi~s~l~ 373 (785)
T KOG0521|consen 312 AENVLIEDLRTCSVKPDAEQRDRRFCFEIISPTKSYLLQAESEKDCQDWISALQNSILSALN 373 (785)
T ss_pred ccccccccchhccccCCcccccceeeEEEecCCcceEEecCchhHHHHHHHHHHHHHHHHHh
Confidence 00147788999999887654 4 55679999999999999999999999999999987654
No 46
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=98.52 E-value=8.6e-07 Score=81.67 Aligned_cols=103 Identities=20% Similarity=0.322 Sum_probs=60.5
Q ss_pred eEEEEEeec-----C-----CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccc
Q 006435 95 ISGVLYKWV-----N-----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (645)
Q Consensus 95 ~~G~L~K~~-----n-----~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~ 164 (645)
++|||..+. + ..++|+.-|.||++++|+.||++.+... ... ...
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~---------~~~-----------------~~~ 55 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPAS---------STP-----------------PDI 55 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCC---------T-B-----------------S--
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCccccc---------CCc-----------------ccc
Confidence 589998852 1 2346999999999999999998421000 000 000
Q ss_pred ccccCCCCceEEEeccceEEecC---CCCccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 165 QRLLNRKPFGEVHLKVSSIRDSK---SDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 165 ~~~~~~kp~G~I~L~~ssi~~~~---~d~~~F~I~t~-~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
......+|.+.|.|..+...... ..++.|.+.++ +..|.|+|.|.+|+++||.+|+-+.
T Consensus 56 ~~~~~~~p~~~i~L~~a~a~~a~dY~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~A 118 (119)
T PF15410_consen 56 QSVENAKPDSSISLHHALAEIASDYTKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAA 118 (119)
T ss_dssp -SS--E-----EE-TT-EEEEETTBTTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred cccccCcceeEEEecceEEEeCcccccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhc
Confidence 00123456788999987665532 23677999886 6999999999999999999999775
No 47
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.30 E-value=4.9e-06 Score=75.20 Aligned_cols=92 Identities=20% Similarity=0.343 Sum_probs=63.2
Q ss_pred eEEEEEee--cCC--CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 95 ISGVLYKW--VNY--GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 95 ~~G~L~K~--~n~--~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
++|||.=. ++. .+||+++|.||.+..|..|....... ..
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~-------------------------------------~~ 44 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKE-------------------------------------NS 44 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCcccc-------------------------------------CC
Confidence 68999754 343 35999999999999999999752110 00
Q ss_pred CCceEEEec---------cc-eEEecCCC-CccEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLK---------VS-SIRDSKSD-DKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 171 kp~G~I~L~---------~s-si~~~~~d-~~~F~I~t~--~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
.|.-+++|. .+ .|..++.| ++-|.|..+ .++.+|-|++..|++.|+.||..-+
T Consensus 45 ~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I~~~~~~~~lllLA~s~~ek~kWV~~L~~~~ 110 (112)
T cd01242 45 TPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQILYANEARDLLLLAPQTDEQNKWVSRLVKKI 110 (112)
T ss_pred CcEEEEEccceeeeecccHHHeeecCcccCCeEEEEEeCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence 122333332 11 23333444 688988775 4999999999999999999997644
No 48
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.23 E-value=9.5e-06 Score=74.20 Aligned_cols=102 Identities=20% Similarity=0.262 Sum_probs=73.6
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
+.+|-|.|-+...+.++.|+|-|=|++|-|-|.... ..++.|.. ....+-+
T Consensus 5 I~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~-----------~~~~~g~~------------------~~~y~~k 55 (112)
T cd01261 5 IMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHG-----------QPRLPGAS------------------SAEYRLK 55 (112)
T ss_pred cccCcEEEEecccCCcceEEEEEecCeEEEEEeccC-----------cccccccc------------------cceEEEE
Confidence 578999998755577999999999999999996421 00111110 0112245
Q ss_pred eEEEeccceEEecCCC---CccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKSD---DKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~-~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
+.|.|....|...++. .+.|.|.+. ++.|.|+|.|++++.+||++|..++.
T Consensus 56 ~~~~l~~~~V~d~~d~~~~knaF~I~~~~~~s~~l~Akt~eeK~~Wm~~l~~~~~ 110 (112)
T cd01261 56 EKFFMRKVDINDKPDSSEYKNAFEIILKDGNSVIFSAKNAEEKNNWMAALISVQT 110 (112)
T ss_pred EEEeeeeeEEEEcCCCcccCceEEEEcCCCCEEEEEECCHHHHHHHHHHHHHHhc
Confidence 7788877666543322 478999985 78999999999999999999999874
No 49
>KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=98.05 E-value=5.7e-06 Score=96.08 Aligned_cols=100 Identities=20% Similarity=0.454 Sum_probs=73.8
Q ss_pred cCCCceEEEEEee--cCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccc
Q 006435 90 IVGNGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (645)
Q Consensus 90 ~~~~~~~G~L~K~--~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~ 167 (645)
.+.+...|||+-. +.-+..|.|||++|.+|++.|+|.+. | |
T Consensus 987 ~idVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~Pd--------D-E---------------------------- 1029 (1116)
T KOG3640|consen 987 AIDVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPD--------D-E---------------------------- 1029 (1116)
T ss_pred ccceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcc--------h-h----------------------------
Confidence 3445788999987 33445599999999999999999862 1 1
Q ss_pred cCCCCceEEEeccceEE---ecC----CCCccEEEEe-------------CCe-EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 168 LNRKPFGEVHLKVSSIR---DSK----SDDKRFSIFT-------------GTK-RLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 168 ~~~kp~G~I~L~~ssi~---~~~----~d~~~F~I~t-------------~~r-t~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+...|.|.|+|..|+-. +.. ..++.|.|.+ .-| ...|.|++.++++.|+.+|+.+...+
T Consensus 1030 krK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~L 1109 (1116)
T KOG3640|consen 1030 KRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVWRPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQL 1109 (1116)
T ss_pred cccCcceeeehhhhhccccccchhhhccCCceeEEEeecccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHHH
Confidence 23348899999988543 222 2356788873 124 67899999999999999999987654
No 50
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.05 E-value=2.6e-05 Score=71.01 Aligned_cols=88 Identities=16% Similarity=0.312 Sum_probs=66.0
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCce
Q 006435 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (645)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (645)
++|||--.++.-+.|||+|++|+...|+||++.. ..++--
T Consensus 2 kEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~----------------------------------------~skyyK 41 (117)
T cd01239 2 KEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEES----------------------------------------GSRYYK 41 (117)
T ss_pred ccceEEEEecCccceeeeEEEecCCeEEEEEcCC----------------------------------------CCeeeE
Confidence 6899999999999999999999999999999752 122334
Q ss_pred EEEeccc-eEEe-------cCCCCccEEEEeCCeEEEEEcC--------------------CHHHHHHHHHHHHHH
Q 006435 175 EVHLKVS-SIRD-------SKSDDKRFSIFTGTKRLHLRAE--------------------TREDRFAWMEALQAV 222 (645)
Q Consensus 175 ~I~L~~s-si~~-------~~~d~~~F~I~t~~rt~~L~Ae--------------------S~~dr~~WI~AL~~a 222 (645)
+|+|..- ++.. ....+.+|.|.|++.+|++.++ ..+..+.|-.||+.|
T Consensus 42 eIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~~vY~VG~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 42 EIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTTNVYFVGGEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred EeehHHheEEeccCCCcCCCCCCCcEEEEEecCEEEEecccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence 5555421 2221 1345789999999999999764 345678899998865
No 51
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=98.05 E-value=2.1e-06 Score=96.63 Aligned_cols=95 Identities=18% Similarity=0.389 Sum_probs=79.4
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
..+||+.|.+...|.|+|||||+++|..+||+.++. ...+|.
T Consensus 250 ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~--------------------------------------~~~~p~ 291 (936)
T KOG0248|consen 250 EKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNN--------------------------------------RDEEPA 291 (936)
T ss_pred hcccchhcchHHHHHHHhHheeeccceEEEEEcCCC--------------------------------------cccccc
Confidence 578999999999999999999999999999998852 123356
Q ss_pred eEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 174 GEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
|.|++..-.+.+..+....|..++.+++|++.++|..--.+|+..|++++...
T Consensus 292 s~~d~~s~~~~~~~~~s~~fqli~~t~~~~~~~~s~~lt~dw~~iL~~~iKv~ 344 (936)
T KOG0248|consen 292 SKIDIRSVTKLEQQGAAYAFQLITSTDKMNFMTESERTTHDWVTILSAAIKAT 344 (936)
T ss_pred CcccccccceeeccchhHHhhhhhhceeEEEeccChhhhhhhHHHHHHHHHHH
Confidence 77777665555566667789999999999999999999999999999988755
No 52
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.03 E-value=1.8e-05 Score=69.07 Aligned_cols=86 Identities=16% Similarity=0.184 Sum_probs=65.0
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeC-CeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQD-GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~-g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
.+.|.+.|+.++ -+|+|=|+|.| ..|.|+.... .. .
T Consensus 2 l~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvdp~~---------------------------------------~~--~ 38 (89)
T cd01262 2 LKIGAVKKRKGL--FAKKRQLILTNGPRLIYVDPVK---------------------------------------KV--V 38 (89)
T ss_pred ceeeeeeehhcc--ccceeeEEEecCceEEEEcCCc---------------------------------------Ce--E
Confidence 468999999876 47999999955 5677776421 11 2
Q ss_pred ceEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
+|+|.+...++++.......|.|.|++|+|+|. +-.....+|+++|+.+.
T Consensus 39 KgeIp~s~~~l~v~~~~~~~F~I~Tp~rty~le-D~~~~a~~W~~~I~~~~ 88 (89)
T cd01262 39 KGEIPWSDVELRVEVKNSSHFFVHTPNKVYSFE-DPKGRASQWKKAIEDLQ 88 (89)
T ss_pred EeEecccccceEEEEecCccEEEECCCceEEEE-CCCCCHHHHHHHHHHHh
Confidence 499999874444444456899999999999995 55688999999998864
No 53
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.01 E-value=1.3e-05 Score=72.52 Aligned_cols=92 Identities=22% Similarity=0.291 Sum_probs=61.5
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCce
Q 006435 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (645)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (645)
++|+|+-+.--.|+||+|||+|+..-|+|+-+..- +..| +..|
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgks----------k~sr-----------------------dL~c---- 44 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEKT----------KNTR-----------------------DLAC---- 44 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCCc----------CCHH-----------------------HHHH----
Confidence 68999999877899999999999999999875321 0001 0000
Q ss_pred EEEeccceE--------EecCCCCccEEEEeC-------CeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 175 EVHLKVSSI--------RDSKSDDKRFSIFTG-------TKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 175 ~I~L~~ssi--------~~~~~d~~~F~I~t~-------~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
-..+....| .-....|..|+|..+ .-.-.|+||+++.+..||.||+-++
T Consensus 45 l~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~~q~~~s~~ik~lCaeDe~t~~~W~ta~Ri~K 108 (114)
T cd01259 45 LNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVGDQSKGSQSIKYLCAEDLPTLDRWLTAIRIAK 108 (114)
T ss_pred HHhcccCcEEEEechhhccCCCCCceEEEeccccCcccchhheeeccCCHHHHHHHHHHHHHHh
Confidence 011111111 112345788888543 1246899999999999999999886
No 54
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.76 E-value=5.8e-05 Score=84.79 Aligned_cols=97 Identities=20% Similarity=0.349 Sum_probs=62.6
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
....|||.|.+...+ |++|||.|.++.++.....++++-. ...++
T Consensus 377 v~~~G~l~k~~~~~~-wk~ry~~l~~~~l~~~~~~~~~~~~----------------------------------~~~~~ 421 (478)
T PTZ00267 377 VTHGGYLYKYSSDMR-WKKRYFYIGNGQLRISLSENPENDG----------------------------------VAPKS 421 (478)
T ss_pred cccceEEeccCCCcc-hhhheEEecCCceEEEeccccccCC----------------------------------CCCcc
Confidence 367999999988776 9999999988777776543221100 00011
Q ss_pred ceEEEeccce-EEe--cCCCCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSS-IRD--SKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 173 ~G~I~L~~ss-i~~--~~~d~~~F~I~t-~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
.....+..+. +.. ....+..|.|.+ ..+.+.+.|+|.++|++||.+|+.|..
T Consensus 422 ~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 477 (478)
T PTZ00267 422 VNLETVNDVFPVPEVYSQKHPNQLVLWFNNGQKIIAYAKTAEDRDQWISKFQRACG 477 (478)
T ss_pred ccHHHhcccccccHHhcCCCCceEEEEecCCcEEEEecCChHHHHHHHHHHHHHhC
Confidence 1111112111 111 123467788755 678889999999999999999999864
No 55
>KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms]
Probab=97.63 E-value=2.5e-05 Score=86.83 Aligned_cols=104 Identities=25% Similarity=0.340 Sum_probs=69.6
Q ss_pred CceEEEEEee-c--CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 93 NGISGVLYKW-V--NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 93 ~~~~G~L~K~-~--n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
+.++|-|.-+ | .++|+|+.|||.|.+..|.|-|-+.++.. +...|....+|-++.
T Consensus 735 p~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS--------~~~~IDl~~IRSVk~-------------- 792 (851)
T KOG3723|consen 735 PLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDS--------DDCPIDLSKIRSVKA-------------- 792 (851)
T ss_pred chhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCC--------CCCCccHHHhhhHHH--------------
Confidence 4678888654 3 36799999999999999999886643211 001111111111110
Q ss_pred CCCceEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 170 RKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
++.-+..++-.+.|.|+|.++||.|+|.+++..++|++.|+-|.+...+
T Consensus 793 ----------v~~kr~~rslpKAFEIFTAD~T~ILKaKDeKNAEEWlqCL~IavAHa~~ 841 (851)
T KOG3723|consen 793 ----------VAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIAVAHAKE 841 (851)
T ss_pred ----------HHhhhhhcccchhhheeecCceEEeecccccCHHHHHHHHHHHHHHHHH
Confidence 0000112333578999999999999999999999999999998876543
No 56
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.57 E-value=3.4e-05 Score=85.92 Aligned_cols=38 Identities=32% Similarity=0.482 Sum_probs=32.2
Q ss_pred CCccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 189 DDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 189 d~~~F~I~t~-~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
.+..|.|++. ..+|||.|.+-+||.+||+||+.-+...
T Consensus 444 Ede~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIlaS 482 (749)
T KOG0705|consen 444 EDECFEIVSNTGQTWHFEATTYEERDAWVQAIQSQILAS 482 (749)
T ss_pred ccceEEEeccccchhhhhhcchhhHHHHHHHHHHHHHHH
Confidence 3557888876 5999999999999999999999887543
No 57
>PLN02866 phospholipase D
Probab=97.50 E-value=0.00064 Score=81.51 Aligned_cols=109 Identities=17% Similarity=0.260 Sum_probs=70.7
Q ss_pred CceEEEEEeec-----C------C---------CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhh
Q 006435 93 NGISGVLYKWV-----N------Y---------GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRI 152 (645)
Q Consensus 93 ~~~~G~L~K~~-----n------~---------~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~ 152 (645)
..+|||+.|+. + . ...|++|||||+++.|.|.+++-..++. ++-++ |..
T Consensus 182 K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~~-------~v~lf--D~~-- 250 (1068)
T PLN02866 182 KLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKPL-------DIIVF--DVL-- 250 (1068)
T ss_pred CcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCcee-------EEEEE--ecc--
Confidence 46899999992 1 0 1359999999999999999876433221 11111 100
Q ss_pred hhhcccccccccccccCCCCceEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 153 ISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
. ....+-.|.|.|..- +.+...-...|.|.+++|++.|+|.|.....+|+.+|+.+....
T Consensus 251 -~------------~~~~~~~~~~~~~~~-~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~ 310 (1068)
T PLN02866 251 -P------------ASNGNGEGQISLAKE-IKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRP 310 (1068)
T ss_pred -c------------ccccCCCcceeeccc-ccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhcc
Confidence 0 001111245554321 22222335678899999999999999999999999999997544
No 58
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=97.48 E-value=0.00049 Score=79.66 Aligned_cols=96 Identities=19% Similarity=0.387 Sum_probs=61.2
Q ss_pred CceEEEEEeecCC--CCC-ceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 93 NGISGVLYKWVNY--GKG-WRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 93 ~~~~G~L~K~~n~--~Kg-WkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
..++||||--+.. +.. -++|||||++..|.|||.+-.++ +
T Consensus 4 ~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~-------~------------------------------ 46 (719)
T PLN00188 4 VVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDN-------Q------------------------------ 46 (719)
T ss_pred ceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccc-------c------------------------------
Confidence 4699999998632 222 58999999999999999752111 0
Q ss_pred CCCceEEEeccceEEecC----CCCccEEE---Ee---CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 170 RKPFGEVHLKVSSIRDSK----SDDKRFSI---FT---GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~----~d~~~F~I---~t---~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
.|..+..+..+.-.++. -..+.|+| .. ..+...|-|.+.+|..+||+||+.|++..
T Consensus 47 -~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 47 -VPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred -ccceeeccCCCceEeecCceEEcCceEEEEEEecCCCccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 11111111111111111 01233443 32 46889999999999999999999999953
No 59
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.40 E-value=0.00042 Score=63.00 Aligned_cols=90 Identities=29% Similarity=0.477 Sum_probs=59.9
Q ss_pred EEEEeecC----CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 97 GVLYKWVN----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 97 G~L~K~~n----~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
|||..+.. ..+.||+|+++|+++-|..|+.. | ++.+. +.+ |
T Consensus 3 GW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~-P----~s~e~--------------w~~----------------p 47 (108)
T cd01258 3 GWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETP-P----LSVED--------------WSR----------------P 47 (108)
T ss_pred eecccccCCCCccccccceEEEEEcCCcEEEEeCC-C----CCHHH--------------HhC----------------h
Confidence 89998843 34789999999999999999975 1 11110 111 1
Q ss_pred ceEEEec-----cceEEe----cCCCCccEEEEeCC--eEEEEEcCCHHHHHHHHHHHHH
Q 006435 173 FGEVHLK-----VSSIRD----SKSDDKRFSIFTGT--KRLHLRAETREDRFAWMEALQA 221 (645)
Q Consensus 173 ~G~I~L~-----~ssi~~----~~~d~~~F~I~t~~--rt~~L~AeS~~dr~~WI~AL~~ 221 (645)
.-..+|- +..... ....+.+|.|-+++ .+.+|+.|+..|+..|..||+.
T Consensus 48 ~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irtg~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 48 LYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRTGTQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred hhhChhHHhhhheeccCCccCcCCCCceEEEEEcCCceeeEEEEecCHHHHHHHHHHHhc
Confidence 1111111 100000 12446789999987 6899999999999999999975
No 60
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.37 E-value=0.0013 Score=61.08 Aligned_cols=33 Identities=33% Similarity=0.479 Sum_probs=29.1
Q ss_pred ccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 191 KRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 191 ~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
..|.|.++.|++.|.|.|.++.+.|+.||+-..
T Consensus 89 ~si~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~ 121 (123)
T PF12814_consen 89 KSIIIVTPDRSLDLTAPSRERHEIWFNALRYLL 121 (123)
T ss_pred eEEEEEcCCeEEEEEeCCHHHHHHHHHHHHHHh
Confidence 445678999999999999999999999998754
No 61
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.33 E-value=0.00033 Score=80.01 Aligned_cols=93 Identities=23% Similarity=0.411 Sum_probs=68.1
Q ss_pred eEEEEEeecC----CC-CCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 95 ISGVLYKWVN----YG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 95 ~~G~L~K~~n----~~-KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
.+|.|.|+.. .+ +.+|+|||-|.+..|+|-|+++
T Consensus 567 k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~----------------------------------------- 605 (800)
T KOG2059|consen 567 KEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPG----------------------------------------- 605 (800)
T ss_pred cccceEeccccccchhhhhhhheEEEeccceeEEecCCc-----------------------------------------
Confidence 4455555432 22 4578999999999999999753
Q ss_pred CCCceEEEeccce----EEec-CCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 170 RKPFGEVHLKVSS----IRDS-KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 170 ~kp~G~I~L~~ss----i~~~-~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
++|.+.|+|..-- +.+. =...+.|.|++.+|+.+|+|.+-.|..+|+.||..+..+-..
T Consensus 606 ~q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~drtly~Q~~n~vEandWldaL~kvs~~N~~ 669 (800)
T KOG2059|consen 606 KQPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTDRTLYVQAKNCVEANDWLDALRKVSCCNQN 669 (800)
T ss_pred cCcccceeHHHHHHHHHhhhhccCCCceEEEEecCcceeEecCCchHHHHHHHHHHHHhccCcc
Confidence 3466888886321 1111 123578999999999999999999999999999998766543
No 62
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.27 E-value=0.0033 Score=56.21 Aligned_cols=87 Identities=18% Similarity=0.220 Sum_probs=63.5
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|.|.-++. =+.|+.-|=+.+|-|.|..+. ...-+
T Consensus 5 lleg~l~~~~~----~~eR~vFLFe~~ll~~K~~~~---------------------------------------~y~~K 41 (97)
T cd01222 5 LLEGRFREHGG----GKPRLLFLFQTMLLIAKPRGD---------------------------------------KYQFK 41 (97)
T ss_pred eeeceEEeecC----CCceEEEEecccEEEEEecCC---------------------------------------eeEEE
Confidence 47888875543 256888888999999886531 01123
Q ss_pred eEEEeccceEEec-CCCCccEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDS-KSDDKRFSIFTGT---KRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 174 G~I~L~~ssi~~~-~~d~~~F~I~t~~---rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
..|.+..-.|.++ ..|+++|.|...+ ++|.|+|.|.++++.||++|+.++
T Consensus 42 ~~i~~~~l~i~e~~~~d~~~F~v~~~~~p~~~~~l~A~s~e~K~~W~~~i~~~i 95 (97)
T cd01222 42 AYIPCKNLMLVEHLPGEPLCFRVIPFDDPKGALQLTARNREEKRIWTQQLKRAM 95 (97)
T ss_pred EEEEecceEEecCCCCCCcEEEEEecCCCceEEEEEecCHHHHHHHHHHHHHHh
Confidence 5566665555554 3468999996643 799999999999999999999875
No 63
>KOG1451 consensus Oligophrenin-1 and related Rho GTPase-activating proteins [Signal transduction mechanisms]
Probab=97.18 E-value=0.0012 Score=74.19 Aligned_cols=100 Identities=23% Similarity=0.328 Sum_probs=69.3
Q ss_pred CCCceEEEEEee--cCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccccc
Q 006435 91 VGNGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (645)
Q Consensus 91 ~~~~~~G~L~K~--~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (645)
-..+++||||-+ ...++.|-+-|++.+...-.+--.... +. . ..
T Consensus 263 ~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~------qk--~--------------------------g~ 308 (812)
T KOG1451|consen 263 TPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPAN------QK--T--------------------------GT 308 (812)
T ss_pred CCcccceeeeehhhhhccchhhhheeEeecccceEEEeecc------cC--C--------------------------CC
Confidence 345899999987 568899999999885432222111100 00 0 01
Q ss_pred CCCCceEEEeccceEEecCCCCccEE--EEeCC--eEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 169 NRKPFGEVHLKVSSIRDSKSDDKRFS--IFTGT--KRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~~d~~~F~--I~t~~--rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
...+..++.|+.|+-+..++-++||| |.+.. -+.+++|-|++||..||+|+..+--
T Consensus 309 k~g~~~~~~lKsC~RRktdSIdKRFCFDve~~erpgviTmQALSE~drrlWmeAMDG~ep 368 (812)
T KOG1451|consen 309 KMGQTATFKLKSCSRRKTDSIDKRFCFDVEVEERPGVITMQALSEKDRRLWMEAMDGAEP 368 (812)
T ss_pred cCCCcceEEehhhccCcccccccceeeeeeecccCCeeehHhhhhhHHHHHHHHhcCCCc
Confidence 11245678899998887777788887 55554 4899999999999999999988743
No 64
>KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms]
Probab=97.08 E-value=0.00091 Score=74.32 Aligned_cols=97 Identities=25% Similarity=0.350 Sum_probs=64.6
Q ss_pred CCCceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 91 ~~~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
+.+.|+|+||-+.--.|+|||-||||+..-|||+.+... ++-| +..|
T Consensus 315 ~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~ts----------k~~r-----------------------~Lq~ 361 (622)
T KOG3751|consen 315 SPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTS----------KEPR-----------------------HLQC 361 (622)
T ss_pred CCccccceeeecccccccceeEEEEEecCcceEccCCCC----------CCch-----------------------hhHH
Confidence 467899999999988899999999999999999875321 1111 0000
Q ss_pred CCceEEEeccceEEe--------cCCCCccEEEEeC-----CeE-EEEEcCCHHHHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLKVSSIRD--------SKSDDKRFSIFTG-----TKR-LHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 171 kp~G~I~L~~ssi~~--------~~~d~~~F~I~t~-----~rt-~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
- -+|..+.|.. ....|..|+|... +|- -.|+||++.-|..|+.||+-++-
T Consensus 362 l----~~~~~snVYt~i~~rKkyksPTd~~f~~K~~~~~~~~r~lk~lCAEDe~t~~~WltAiRl~Ky 425 (622)
T KOG3751|consen 362 L----ADLHSSNVYTGIGGRKKYKSPTDYGFCIKPNKLRNKRRFLKMLCAEDEQTRTCWLTAIRLLKY 425 (622)
T ss_pred H----HhcccCceEEeecchhccCCCCCceEEeeeccccCcccceeeeecccchhHHHHHHHHHHHHH
Confidence 0 0011111110 1235788888642 232 37899999999999999998874
No 65
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.08 E-value=0.0031 Score=70.62 Aligned_cols=107 Identities=21% Similarity=0.335 Sum_probs=66.9
Q ss_pred cCCCceEEEEEeecC---------CC-CCceeeEEEEeCCeEEEEEecCC-Cccccchhhhccceeeccchhhhhhhccc
Q 006435 90 IVGNGISGVLYKWVN---------YG-KGWRPRWFVLQDGVLSYYKIHGP-DKIIVSEETERGCKVIGEESTRIISKRKH 158 (645)
Q Consensus 90 ~~~~~~~G~L~K~~n---------~~-KgWkrRWFVL~~g~LsYYk~~~~-~~i~~~~e~~~~~rvig~~~~~~~~~~~~ 158 (645)
.+.+-+.|+|..+.. .+ +|||.-|-||++-+||+-|++-. ++.+.-.+ ++.
T Consensus 503 sa~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kalse~~---------------lkn--- 564 (774)
T KOG0932|consen 503 SAATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALSESD---------------LKN--- 564 (774)
T ss_pred CchhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchhhhh---------------hhh---
Confidence 345568899976532 33 47999999999999988886421 11110000 000
Q ss_pred ccccccccccCCCCceEEEeccceEEec-CCCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 159 KKETTSQRLLNRKPFGEVHLKVSSIRDS-KSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 159 ~~~~~~~~~~~~kp~G~I~L~~ssi~~~-~~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
+.+ ||=..++-..+ ......|.+.|.+ |.|.|+|.+.++|+.||..|+-|.+.|.-
T Consensus 565 -------------avs-vHHALAt~AtdY~KKp~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA~fSa 622 (774)
T KOG0932|consen 565 -------------AVS-VHHALATPATDYSKKPHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVAAAFSA 622 (774)
T ss_pred -------------hhh-hhhhhcCCCcccccCCceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHHhccC
Confidence 000 11111111111 1235678888864 99999999999999999999999998844
No 66
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.94 E-value=0.003 Score=58.96 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=50.3
Q ss_pred ceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCceEEEeccceEEe---
Q 006435 109 WRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD--- 185 (645)
Q Consensus 109 WkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi~~--- 185 (645)
-+.||+.|=+++|-|-|.+..++..|- ..-|++.|.+.......
T Consensus 27 ~~~vylfLFnDlLl~tkkK~~~~f~V~---------------------------------dy~~r~~l~V~~~e~~~~~~ 73 (125)
T cd01221 27 ARTIYLFLFNDLLLITKKKLGSTFVVF---------------------------------DYAPRSFLRVEKIEPDNQKI 73 (125)
T ss_pred CCcEEEEEecceEEEEEecCCCeEEEE---------------------------------eeccccceEEeecccccccc
Confidence 357899999999999997643322210 11133444443221110
Q ss_pred -----cCCCCccEEEE------eCCeEEEEEcCCHHHHHHHHHHHH
Q 006435 186 -----SKSDDKRFSIF------TGTKRLHLRAETREDRFAWMEALQ 220 (645)
Q Consensus 186 -----~~~d~~~F~I~------t~~rt~~L~AeS~~dr~~WI~AL~ 220 (645)
.......|.|. .-++.+.|+|+|+.||.+||+||.
T Consensus 74 ~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al~ 119 (125)
T cd01221 74 PLGSNLVGRPNLFLLTLLRNADDKQAELLLSADSQSDRERWLSALA 119 (125)
T ss_pred cccccccCCCceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhcC
Confidence 01235678874 224789999999999999999984
No 67
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.84 E-value=0.014 Score=53.15 Aligned_cols=93 Identities=15% Similarity=0.242 Sum_probs=66.4
Q ss_pred ceEEEEEeecCCCCCc-eeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 94 GISGVLYKWVNYGKGW-RPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgW-krRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
.++|-|.+.+. .+|| +.|.|-|=|+.|-|.|.... + .....-
T Consensus 3 i~~Gel~~~s~-~~g~~q~R~~FLFD~~LI~CKkd~~------------------------r------------~~~~~y 45 (109)
T cd01224 3 FLQGEATRQKQ-NKGWNSSRVLFLFDHQMVLCKKDLI------------------------R------------RDHLYY 45 (109)
T ss_pred eEeeeEEEEec-ccCCcccEEEEEecceEEEEecccc------------------------c------------CCcEEE
Confidence 47888888762 3455 57999999999999995310 0 011123
Q ss_pred ceEEEeccceEEecCCC---------CccEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIRDSKSD---------DKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~~d---------~~~F~I~t~--~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
+|.|.|..+.|...++. .+.|.|... .+.|.|.|.|+++.+.||+||..-+
T Consensus 46 Kgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~~~~~~~f~~Kt~e~K~~Wm~a~~~er 107 (109)
T cd01224 46 KGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSESTDEWYLFSFKSAERKHRWLSAFALER 107 (109)
T ss_pred EEEEEcccEEEEECCCCccccCCceeEEEEEEEEcCCCeEEEEEECCHHHHHHHHHHHHHhh
Confidence 58999998888754322 245777765 4789999999999999999997644
No 68
>PF15406 PH_6: Pleckstrin homology domain
Probab=96.80 E-value=0.003 Score=57.12 Aligned_cols=49 Identities=22% Similarity=0.391 Sum_probs=40.8
Q ss_pred CCceEEEeccce-EEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLKVSS-IRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (645)
Q Consensus 171 kp~G~I~L~~ss-i~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~ 221 (645)
.|.|.|+|...+ +. ++....|.+...+...+|+|.|..||..||.+|+.
T Consensus 62 ~P~GiinLadase~~--~~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk~ 111 (112)
T PF15406_consen 62 SPSGIINLADASEPE--KDGSNKFHFKIKGHKHTFEAASAAERDNWVAQLKA 111 (112)
T ss_pred CCcceEehhhccccc--cCCCceEEEEeCCceeeeecCCHHHhccHHHHhhc
Confidence 488999997543 33 44568899888999999999999999999999864
No 69
>PF15404 PH_4: Pleckstrin homology domain
Probab=96.40 E-value=0.019 Score=57.05 Aligned_cols=32 Identities=25% Similarity=0.467 Sum_probs=29.4
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEEe
Q 006435 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKI 126 (645)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~ 126 (645)
|+|+||.+.+....|+++++||-.|.|--|+.
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~ 32 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQL 32 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEE
Confidence 57999999988889999999999999988886
No 70
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=96.09 E-value=0.0085 Score=67.62 Aligned_cols=99 Identities=17% Similarity=0.283 Sum_probs=72.5
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|-|+|.+.....-+.||.+|=+..|-|-+.+- |+-| ....++
T Consensus 273 iKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~--------------~~~~---------------------~k~~~r 317 (623)
T KOG4424|consen 273 IKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRK--------------RLPG---------------------SKYEVR 317 (623)
T ss_pred hhccceeeeeccCCCcceeEEEEehhHHHhhhhhh--------------hccc---------------------ceeccc
Confidence 68999999988777899999999999999988541 0000 111122
Q ss_pred eEEEeccceEEecCCC--CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 174 GEVHLKVSSIRDSKSD--DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d--~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
-.+.+..+.+..+... ...|.+....|...|+|.|.++..+||++|+.+++.+.
T Consensus 318 ~~~s~~~~~v~~~~~~~~~~tF~~~G~~r~vel~a~t~~ek~eWv~~I~~~Id~~k 373 (623)
T KOG4424|consen 318 ARCSISHMQVQEDDNEELPHTFILTGKKRGVELQARTEQEKKEWVQAIQDAIDKHK 373 (623)
T ss_pred eeeccCcchhcccccccCCceEEEecccceEEeecCchhhHHHHHHHHHHHHHHHH
Confidence 3333433333333222 57788888899999999999999999999999999874
No 71
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=95.98 E-value=0.0031 Score=73.43 Aligned_cols=95 Identities=22% Similarity=0.361 Sum_probs=74.9
Q ss_pred CCCceEEEEEeecCCCC-CceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 91 VGNGISGVLYKWVNYGK-GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 91 ~~~~~~G~L~K~~n~~K-gWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
..+.+.|||.|-.--+. -.++||.-+....|.||....+
T Consensus 85 sp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k~---------------------------------------- 124 (1186)
T KOG1117|consen 85 SPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPKD---------------------------------------- 124 (1186)
T ss_pred CchhhcchhhccCcCcccccCccceecCCCCccccCCCCC----------------------------------------
Confidence 34689999999754433 3799999999999999997521
Q ss_pred CCCceEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 170 RKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
..+.|.|.|...+... ...+..|.++++.|+|.+++++..+|..||..++++....
T Consensus 125 py~k~~i~va~is~v~-~~gd~kfevitn~r~fvfr~e~~~~r~~w~s~l~s~~~~Q 180 (1186)
T KOG1117|consen 125 PYSKGPIPVAAISAVR-NFGDNKFEVITNQRTFVFRQESEGERFIWVSPLQSALKEQ 180 (1186)
T ss_pred CCCCCceeeehhhhhh-hccCceEEEEecceEEEEecCCcccceeeechhhhcchhh
Confidence 1235788876544322 3468899999999999999999999999999999987654
No 72
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=95.88 E-value=0.011 Score=53.48 Aligned_cols=92 Identities=13% Similarity=0.221 Sum_probs=60.0
Q ss_pred ceEEEEEeecCCC-CCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 94 GISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 94 ~~~G~L~K~~n~~-KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
++.||+.|-|+-+ ..||+|||-|-.+-|-+|-..+.. +
T Consensus 4 IvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~~----------~------------------------------- 42 (116)
T cd01240 4 IVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEAN----------K------------------------------- 42 (116)
T ss_pred EEeeehhhhCCHHHHHHHHHHheeCcceeeeccccccc----------C-------------------------------
Confidence 6899999998765 569999999988888886432110 0
Q ss_pred ceEEEec-cceEEe---cCCCCccEEE-EeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 173 FGEVHLK-VSSIRD---SKSDDKRFSI-FTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 173 ~G~I~L~-~ssi~~---~~~d~~~F~I-~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
.--|.+. +-.|.+ --.++++..| .-+++.|.|++++..+..+|...|+.+-...
T Consensus 43 ~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~~k~vlt~~d~i~l~qW~~elr~a~r~S 101 (116)
T cd01240 43 PELITMDQIEDVSVEFQQIKEENCILLKIRDEKKIVLTNSDEIELKQWKKELRDAHRES 101 (116)
T ss_pred CcEEEeehhhhcchhheeeccCceEEEEEcCCceEEEecCCcHHHHHHHHHHHHHHHHH
Confidence 0112111 001100 0023444444 3467899999999999999999998886544
No 73
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.49 E-value=0.21 Score=46.07 Aligned_cols=52 Identities=17% Similarity=0.522 Sum_probs=40.2
Q ss_pred ceEEEeccceEEec-CCCCccEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIRDS-KSDDKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 173 ~G~I~L~~ssi~~~-~~d~~~F~I~t~~-----rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
++.|.|..-.+.+. ..|+++|.|...+ .+|.|+|.|.+.+++||..|+.+.+
T Consensus 56 K~~ikls~l~l~e~v~gd~~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 56 KSKLQVSKMGLTEHVEGDPCRFALWSGDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred ecceeeeeeEeEEccCCCCceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 36666665556554 4578999986543 6999999999999999999998754
No 74
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=95.48 E-value=0.059 Score=63.31 Aligned_cols=89 Identities=24% Similarity=0.390 Sum_probs=62.9
Q ss_pred ceEEEEEeecCCCC----------CceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccc
Q 006435 94 GISGVLYKWVNYGK----------GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (645)
Q Consensus 94 ~~~G~L~K~~n~~K----------gWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~ 163 (645)
...|+||+.-...+ --.++|+||.+|.|+||.+..
T Consensus 493 ~~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~----------------------------------- 537 (1186)
T KOG1117|consen 493 FLCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEK----------------------------------- 537 (1186)
T ss_pred cccceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcC-----------------------------------
Confidence 57899999743331 246799999999999999752
Q ss_pred cccccCCCCceEEEeccc-eEEecCCCC-------ccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHH
Q 006435 164 SQRLLNRKPFGEVHLKVS-SIRDSKSDD-------KRFSIFT-GTKRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 164 ~~~~~~~kp~G~I~L~~s-si~~~~~d~-------~~F~I~t-~~rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
...|.|.|+...- .+.+.+.+. ..|.|.. +.|.|++-++++++...|..|+-..
T Consensus 538 -----S~tP~~lI~~~Eivclav~~pd~~pn~~~~f~fE~~l~~er~~~fgle~ad~l~~wt~aiaKh 600 (1186)
T KOG1117|consen 538 -----STTPNGLININEIVCLAVHPPDTYPNTGFIFIFEIYLPGERVFLFGLETADALRKWTEAIAKH 600 (1186)
T ss_pred -----CCCCCceeeccceEEEeecCCCCCCCcCceeEEEEeecccceEEeecccHHHHHHHHHHHHHh
Confidence 1236788887632 222333332 2355655 5799999999999999999998654
No 75
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=95.36 E-value=0.089 Score=46.75 Aligned_cols=90 Identities=18% Similarity=0.161 Sum_probs=61.4
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
..+|+|.|-.. +.=|.|=|-|=+++|-|-+..... .. .....+-.
T Consensus 4 v~eg~lvel~~--~~rK~R~~FLFnDlLvc~~ik~~~-----~~----------------------------k~~kY~~~ 48 (96)
T cd01228 4 VKDSFLVELVE--GSRKLRHLFLFTDVLLCAKLKKTS-----RG----------------------------KHQQYDCK 48 (96)
T ss_pred cccceeeeehh--CCCcceEEEeeccEEEEEEeeecc-----Cc----------------------------ccccccee
Confidence 36799999763 334888899999999998864100 00 01122223
Q ss_pred eEEEeccceEEecCCCCccEEE-EeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKSDDKRFSI-FTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I-~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
-.|+|..-.+...+ |.+ .+++|+|.+-|.|..|+.+||++|+...
T Consensus 49 w~IPL~dl~~~~~~-----~~~~~~~~KSf~~~asS~~Er~eW~~hI~~~~ 94 (96)
T cd01228 49 WYIPLADLSFPSEP-----FRIHNKNGKSYTFLLSSDYERSEWRESIQKLQ 94 (96)
T ss_pred EEEEhHHheecchh-----hhccccCCceEEEEecCHHHHHHHHHHHHHHh
Confidence 56888765554332 544 4689999999999999999999997643
No 76
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=95.21 E-value=0.14 Score=46.05 Aligned_cols=52 Identities=15% Similarity=0.242 Sum_probs=40.5
Q ss_pred ceEEEeccceEE---ecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIR---DSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 173 ~G~I~L~~ssi~---~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
..+++|..-.+. .++.-...|.|.++.+++.++|+|++++.+||+.|+.|+.
T Consensus 45 ~~~~~L~~i~V~ni~D~~~~kNafki~t~~~s~i~qaes~~~K~eWl~~le~a~~ 99 (100)
T cd01226 45 ESTYSLNSVAVVNVKDRENAKKVLKLLIFPESRIYQCESARIKTEWFEELEQAKR 99 (100)
T ss_pred EEEEehHHeEEEecCCCcCcCceEEEEeCCccEEEEeCCHHHHHHHHHHHHHHhc
Confidence 366666643332 2222357899999999999999999999999999999974
No 77
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=95.08 E-value=0.0095 Score=69.49 Aligned_cols=96 Identities=25% Similarity=0.406 Sum_probs=71.8
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
....|||..+-..-.||++=|.|..+-+|++||++.++ .|
T Consensus 924 ~qLsg~LlrkfknssgwqkLwvvft~fcl~fyKS~qD~----------------------------------------~~ 963 (1036)
T KOG3531|consen 924 NQLSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQDS----------------------------------------EP 963 (1036)
T ss_pred hhhhHHHHHHhhccccceeeeeeecceeeEeecccccc----------------------------------------cc
Confidence 36889998875555699999999999999999997321 13
Q ss_pred ceEEEeccceEEec-CC----CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 173 FGEVHLKVSSIRDS-KS----DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 173 ~G~I~L~~ssi~~~-~~----d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
..+++|.+-++... .. .+..|.+.-...+|+++|++.--...||+.|+.+-...-+
T Consensus 964 laslPlLgysvs~P~~~d~i~K~~vfkl~fk~hvyffraes~yt~~rw~evi~~a~~s~d~ 1024 (1036)
T KOG3531|consen 964 LASLPLLGYSVSIPAEPDPIQKDYVFKLKFKSHVYFFRAESYYTFERWMEVITDAPSSADR 1024 (1036)
T ss_pred cccccccccccCCCCCCCCcchhheeeeehhhhHHHHhhhhhhhhhhHHHHhhcCCccCCC
Confidence 34555555444322 22 2567788888899999999999999999999998765543
No 78
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=95.04 E-value=0.056 Score=61.37 Aligned_cols=35 Identities=31% Similarity=0.610 Sum_probs=30.6
Q ss_pred CccEEE-EeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 190 DKRFSI-FTGTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 190 ~~~F~I-~t~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
...|.+ ++++|.+-|+|.+.++|+.||.+||.+..
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (496)
T PTZ00283 455 AHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLG 490 (496)
T ss_pred CcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcC
Confidence 566776 46789999999999999999999999865
No 79
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]
Probab=94.97 E-value=0.0096 Score=67.36 Aligned_cols=91 Identities=22% Similarity=0.392 Sum_probs=61.7
Q ss_pred ceEEEEEeec-CCCCCceeeEEEEeC------CeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccc
Q 006435 94 GISGVLYKWV-NYGKGWRPRWFVLQD------GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (645)
Q Consensus 94 ~~~G~L~K~~-n~~KgWkrRWFVL~~------g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~ 166 (645)
..+||||--| |.+|.||+|||||-. .+-+| +.+
T Consensus 465 khsgylyaig~nvwkrwkkrffvlvqvsqytfamcsy-rek--------------------------------------- 504 (1218)
T KOG3543|consen 465 KHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSY-REK--------------------------------------- 504 (1218)
T ss_pred ccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhh-hhc---------------------------------------
Confidence 4789999986 678999999999932 12223 321
Q ss_pred ccCCCCceEEEeccceEEecCC-----CC-ccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 167 LLNRKPFGEVHLKVSSIRDSKS-----DD-KRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~~-----d~-~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
...|.--|.|.+-+|.-.+. .. ..|.-+..+.+..|..+++.||.-|++|+-.|-...
T Consensus 505 --kaepqel~qldgytvdytdp~pglqgg~~ffnavkegdtvifasddeqdr~lwvqamyratgqs 568 (1218)
T KOG3543|consen 505 --KAEPQELIQLDGYTVDYTDPSPGLQGGKHFFNAVKEGDTVIFASDDEQDRHLWVQAMYRATGQS 568 (1218)
T ss_pred --ccChHHHhhccCeeeccCCCCCccccchHHHHHhccCceEEeccCchhhhhHHHHHHHHhhCCc
Confidence 11244556677666643221 12 335555667889999999999999999998876543
No 80
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=94.67 E-value=0.0092 Score=68.28 Aligned_cols=87 Identities=6% Similarity=-0.234 Sum_probs=61.6
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
...|+|.|+...+|.||.|||++.+|.+.||+.+-+ ++.
T Consensus 260 s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d-----------------------------------------~~s 298 (936)
T KOG0248|consen 260 SRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKID-----------------------------------------IRS 298 (936)
T ss_pred HHHHHHHhHheeeccceEEEEEcCCCccccccCccc-----------------------------------------ccc
Confidence 678999999999999999999999999999998621 122
Q ss_pred eEEEecc-ceEE-ecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKV-SSIR-DSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 174 G~I~L~~-ssi~-~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
|++-+.. |++. ..-... -...+-+.+++|-++...-.++||++++..-
T Consensus 299 ~~~~~~~~~s~~fqli~~t--~~~~~~~~s~~lt~dw~~iL~~~iKv~~~~~ 348 (936)
T KOG0248|consen 299 VTKLEQQGAAYAFQLITST--DKMNFMTESERTTHDWVTILSAAIKATTLRE 348 (936)
T ss_pred cceeeccchhHHhhhhhhc--eeEEEeccChhhhhhhHHHHHHHHHHHhccc
Confidence 4444432 2221 111111 1233445789999999999999999988753
No 81
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=93.44 E-value=0.44 Score=43.45 Aligned_cols=34 Identities=32% Similarity=0.602 Sum_probs=29.1
Q ss_pred CCCccEEEEeCC----eEEEEEcCCHHHHHHHHHHHHH
Q 006435 188 SDDKRFSIFTGT----KRLHLRAETREDRFAWMEALQA 221 (645)
Q Consensus 188 ~d~~~F~I~t~~----rt~~L~AeS~~dr~~WI~AL~~ 221 (645)
..++.|+|+-+. ++++|.|.|.++++.|++.|+.
T Consensus 77 ~e~~~fTIiy~~~~~~k~L~lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 77 LEERCFTIVYGTDLNLKSLDLVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred ccccEEEEEECCCCCeeEEEEEECCHHHHHHHHHHHhh
Confidence 457889987654 6899999999999999999874
No 82
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=89.87 E-value=1.8 Score=39.70 Aligned_cols=78 Identities=21% Similarity=0.218 Sum_probs=56.2
Q ss_pred CceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCceEEEeccceEEe--
Q 006435 108 GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD-- 185 (645)
Q Consensus 108 gWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi~~-- 185 (645)
.=+.|||||=.++|....... . - .+-.-.|.++|+.-+|..
T Consensus 27 e~~eRyLvLFp~~LlilS~s~--------r-~----------------------------sGf~yqGkLPL~~i~v~~lE 69 (111)
T cd01225 27 EKRERYLVLFPNVLLMLSASP--------R-M----------------------------SGFIYQGKLPLTGIIVTRLE 69 (111)
T ss_pred ccceeEEEEcCceEEEEEcCC--------C-c----------------------------cceEEeeeecccccEEechH
Confidence 347899999988888776421 0 0 011124889998887763
Q ss_pred -cCCCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 006435 186 -SKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 186 -~~~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
+....+.|.|..+. -+..+.|.+.+|.++||..|+.-
T Consensus 70 d~e~~~~aFeI~G~li~~i~v~C~~~~e~~~Wl~hL~~~ 108 (111)
T cd01225 70 DTEALKNAFEISGPLIERIVVVCNNPQDAQEWVELLNAN 108 (111)
T ss_pred hccCccceEEEeccCcCcEEEEeCCHHHHHHHHHHHHhh
Confidence 22335789998765 77888899999999999999874
No 83
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=89.82 E-value=4.2 Score=38.55 Aligned_cols=54 Identities=24% Similarity=0.384 Sum_probs=41.3
Q ss_pred ceEEEeccceEEec-CCCCccEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 173 FGEVHLKVSSIRDS-KSDDKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 173 ~G~I~L~~ssi~~~-~~d~~~F~I~t~--~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
++.|.|..-.+.++ ..|+++|.|-+. ..+|.|+|.|.+.++.|++.|.......
T Consensus 62 K~~ikls~lglte~v~gd~~kFeiw~~~~~~~yilqA~t~e~K~~Wv~~I~~iL~~Q 118 (133)
T cd01227 62 KQSLKMTAVGITENVKGDTKKFEIWYNAREEVYILQAPTPEIKAAWVNEIRKVLTSQ 118 (133)
T ss_pred eeeEEeecccccccCCCCccEEEEEeCCCCcEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 36666655555554 456799999765 4699999999999999999999876543
No 84
>PF15408 PH_7: Pleckstrin homology domain
Probab=89.82 E-value=0.17 Score=44.08 Aligned_cols=97 Identities=12% Similarity=0.195 Sum_probs=55.2
Q ss_pred EEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCceE
Q 006435 96 SGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGE 175 (645)
Q Consensus 96 ~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~ 175 (645)
+||||.--. ..-|+||.+|..-.|-+|..+|...+.. +. ++ +..=.
T Consensus 1 EGYLY~~E~--~si~rRF~~L~~K~~~~~~~KGG~~L~s-----F~-----------L~----------------~s~~s 46 (104)
T PF15408_consen 1 EGYLYRDED--SSIQRRFVMLRSKQFNMYEDKGGQYLCS-----FQ-----------LS----------------SSVVS 46 (104)
T ss_pred CCeEEEecc--chHHHHHHhhhhceeEEecccCCceeee-----ee-----------hh----------------hhhhh
Confidence 589987521 2368999999999999999886533220 00 00 00011
Q ss_pred EEeccceEEecCCCCccEEE--EeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 176 VHLKVSSIRDSKSDDKRFSI--FTG-TKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 176 I~L~~ssi~~~~~d~~~F~I--~t~-~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
|+|..-+-..+.-.-..|-| ..+ .+...+-|+|++-++.||++|+.-....
T Consensus 47 ~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~~~~FA~S~~~~~~Wi~~mN~~s~~~ 100 (104)
T PF15408_consen 47 HPMVNFSQAVPNLGINAFGFLMYSPSRRHVQCFASSKKVCQSWIQVMNSPSFRV 100 (104)
T ss_pred cccccccccCCCCCeeEEEEEEecCCcchhhhhhhHHHHHHHHHHHhcChhhhh
Confidence 12211110001111123443 233 5778899999999999999998755443
No 85
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=88.71 E-value=0.93 Score=51.76 Aligned_cols=90 Identities=21% Similarity=0.239 Sum_probs=62.6
Q ss_pred CCceEEEEEeecCCCCCceeeEEEE-eCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 92 GNGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 92 ~~~~~G~L~K~~n~~KgWkrRWFVL-~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
...+.|+|.|+...+. |+|.|+| ..+.|.|+.-.. .
T Consensus 450 ~i~k~~~l~k~~~lf~--rkr~lllTn~~rll~~~~~~---~-------------------------------------- 486 (604)
T KOG0592|consen 450 LILKEGALEKRQGLFA--RKRMLLLTNGPRLLYVDPQN---L-------------------------------------- 486 (604)
T ss_pred hHHhHHHHHhhhhhhh--ceeEEEecCCCeEEEEeccc---c--------------------------------------
Confidence 3467888888866554 7799999 567788877320 0
Q ss_pred CCceEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 171 KPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
...|+|.++.+ ++.-......|.|.|+.|+|+|--. +.....|-+||..+....
T Consensus 487 ~lk~eip~~~~-~~~e~~n~~~~~i~TP~k~~~l~d~-~~~as~w~~ai~~~~~~~ 540 (604)
T KOG0592|consen 487 VLKGEIPWSPD-LRVELKNSSTFFIHTPNKVYYLEDP-EQRASVWCKAIETVRKRY 540 (604)
T ss_pred eeccccccCcc-cceeeccCcceEEECCccceeccCc-ccchhHHHHhhhhhhhcc
Confidence 02377777663 2333345788999999999999653 455678999999995444
No 86
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=86.99 E-value=5 Score=37.22 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=27.8
Q ss_pred cEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 192 RFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 192 ~F~I~t~--~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
.|.|... ...|+|.|.|++++..||+||..|+.-
T Consensus 78 ~f~L~~~~~~~~~~f~~Ktee~K~kWm~al~~a~sn 113 (116)
T cd01223 78 GFYLAHKQGKTGFTFYFKTEHLRKKWLKALEMAMSN 113 (116)
T ss_pred EEEEEecCCCccEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 3556543 367999999999999999999999764
No 87
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]
Probab=86.77 E-value=0.0085 Score=64.60 Aligned_cols=80 Identities=29% Similarity=0.481 Sum_probs=61.4
Q ss_pred CceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCceEEEeccceE--Ee
Q 006435 108 GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSI--RD 185 (645)
Q Consensus 108 gWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi--~~ 185 (645)
.|++-||||.+..|.||.......+ ...-|+|+|..|.- ..
T Consensus 34 ~~~k~~~~~~~~~~~~~~d~~A~~~-------------------------------------~~L~~~~~LR~C~~v~e~ 76 (593)
T KOG4807|consen 34 QWKKHWFVLTDSSLKYYRDSTAEEA-------------------------------------DELDGEIDLRSCTDVTEY 76 (593)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhc-------------------------------------ccCCccccHHHHHHHHHH
Confidence 4999999999999999996421100 01238999988742 12
Q ss_pred cCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 186 SKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 186 ~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
...-.+.|+|.+-+..|.|.|-+.--+..||.|+.....
T Consensus 77 a~q~nY~~~i~~~~~~~tL~~~~s~Ir~~~~~A~~kT~~ 115 (593)
T KOG4807|consen 77 AVQRNYGFQIHTKDAVYTLSAMTSGIRRNWIEALRKTVR 115 (593)
T ss_pred HHHhccceeecccchhhhhHHHHHHHHHHHHHHHHhccC
Confidence 234578999999999999999999999999999996544
No 88
>KOG1738 consensus Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like [Nucleotide transport and metabolism]
Probab=85.50 E-value=0.45 Score=54.73 Aligned_cols=37 Identities=30% Similarity=0.520 Sum_probs=30.0
Q ss_pred CCCceEEEEEeec--CCC-CCceeeEEEEeCCeEEEEEec
Q 006435 91 VGNGISGVLYKWV--NYG-KGWRPRWFVLQDGVLSYYKIH 127 (645)
Q Consensus 91 ~~~~~~G~L~K~~--n~~-KgWkrRWFVL~~g~LsYYk~~ 127 (645)
....++|||++.. +++ ..|++=||||.|..|+.|+++
T Consensus 560 ~~G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~ 599 (638)
T KOG1738|consen 560 GRGDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNH 599 (638)
T ss_pred ccchhhccchhhccchHHHHHhhhheeeecCchhhhhhhh
Confidence 3356899999875 233 359999999999999999987
No 89
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=76.01 E-value=3.2 Score=39.30 Aligned_cols=34 Identities=21% Similarity=0.069 Sum_probs=12.3
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEec
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIH 127 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~ 127 (645)
+.+|-|.|++.....|-.=-..|=|..|---|.+
T Consensus 2 i~~G~L~Rk~~~~~~~~di~~~LFDh~Lll~K~k 35 (135)
T PF15405_consen 2 IYKGDLKRKGDNSFNWVDIHVYLFDHYLLLTKPK 35 (135)
T ss_dssp ---------------S-EEEEEEESSEEEEEEEE
T ss_pred ccccccccccccccccceeEEEeeccEEEEEEEE
Confidence 4689999998888888776666777777666654
No 90
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=75.95 E-value=2.1 Score=46.91 Aligned_cols=94 Identities=24% Similarity=0.294 Sum_probs=58.7
Q ss_pred ceEEEEEeec--CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 94 GISGVLYKWV--NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 94 ~~~G~L~K~~--n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
..-|||.++. +-.+.|++-+.+|.+.-|..|..- | .-++. + ..
T Consensus 293 kHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~-P------~~kea------------w----------------s~ 337 (506)
T KOG3551|consen 293 KHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESM-P------WTKEA------------W----------------SR 337 (506)
T ss_pred hhhhhHHhhccCCChhhhhhheeeechhhhhhhhcC-h------hhHHH------------h----------------cC
Confidence 3459999994 334569999999977777777753 0 11110 0 01
Q ss_pred CceEEEeccceEEe--------cCCCCccEEEEeCC----eEEEEEcCCHHHHHHHHHHHHHH
Q 006435 172 PFGEVHLKVSSIRD--------SKSDDKRFSIFTGT----KRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 172 p~G~I~L~~ssi~~--------~~~d~~~F~I~t~~----rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
|..+-.|-..-+.- ...-+..|..-||+ .++.|++|+..|+..|..+|..-
T Consensus 338 P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~RtGTrqGV~thlfrvEThrdLa~WtRslVqG 400 (506)
T KOG3551|consen 338 PRHTYPLVATRLVHSGSGKGSVIKGLTLSFATRTGTRQGVETHLFRVETHRELAAWTRSLVQG 400 (506)
T ss_pred hhhhhhhhhhhheecCCCCCCCcCCceEEEEEecccccceEEEEEEeccHHHHHHHHHHHHHH
Confidence 22333332111110 11124579998887 58999999999999999988654
No 91
>KOG3727 consensus Mitogen inducible gene product (contains ERM and PH domains) [Cell cycle control, cell division, chromosome partitioning]
Probab=74.99 E-value=0.57 Score=53.22 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=38.4
Q ss_pred CceEEEeccceEEecCCC----CccEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 172 PFGEVHLKVSSIRDSKSD----DKRFSIFT---GTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 172 p~G~I~L~~ssi~~~~~d----~~~F~I~t---~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
|.+.|+|++|.+.++-.+ ...|.|.. +..-++|||+++..-..||.|-+.|.
T Consensus 400 p~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~QYA~WMAaCrLAS 458 (664)
T KOG3727|consen 400 PAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQYARWMAACRLAS 458 (664)
T ss_pred CCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHHHHHHHHHHhhHhh
Confidence 567888888877655333 23455433 46889999999999999999987764
No 92
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=72.04 E-value=0.16 Score=59.44 Aligned_cols=90 Identities=16% Similarity=0.284 Sum_probs=65.6
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCe-EEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 95 ISGVLYKWVNYGKGWRPRWFVLQDGV-LSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~-LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
..|-+.++.|-...||.|+|.+++.+ +.|-|... +..+
T Consensus 4 ~rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa~-----------------------------------------g~~~ 42 (1099)
T KOG1170|consen 4 TRGLDNDVDNEREAWKQSILRAKDRMPEKVAKTAS-----------------------------------------GPLF 42 (1099)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHhccC-----------------------------------------CccH
Confidence 46777778888888999999998877 44444320 1112
Q ss_pred eEEEeccceEEecCC--CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 174 GEVHLKVSSIRDSKS--DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 174 G~I~L~~ssi~~~~~--d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
-.+.|..+.+.++.. -...|+|+|+-|+..++|++..++..||.+++.....
T Consensus 43 ~~~d~t~a~~~eSs~~n~~~sf~vi~~~rk~r~~adn~ke~e~wi~~~kt~q~~ 96 (1099)
T KOG1170|consen 43 ALLDLTSAHVAESSTNNPRPSFCVITPVRKHRLCADNRKEMEKWINQSKTPQHL 96 (1099)
T ss_pred HHHhcccccccccccCCCCCCeeEecccHHhhhhccchhHHHHhhccccchhhc
Confidence 445555555555432 3567999999999999999999999999999887653
No 93
>KOG3520 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=70.51 E-value=3.9 Score=50.54 Aligned_cols=57 Identities=21% Similarity=0.403 Sum_probs=47.0
Q ss_pred ceEEEeccceEEecCCCCccEEEE-eC---CeEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 006435 173 FGEVHLKVSSIRDSKSDDKRFSIF-TG---TKRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~-t~---~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~~ 229 (645)
.++|.|..-.++....|.+.|.|+ +. -..|.|.|.|..||..||+-|+.++...++.
T Consensus 667 spVisL~~livRevAtd~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~s~~~~ 727 (1167)
T KOG3520|consen 667 SPVISLQKLIVREVATDEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVASCPRN 727 (1167)
T ss_pred CCceehHHHHHHHHhccccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhCCcc
Confidence 478888877667667777777654 43 4899999999999999999999999998774
No 94
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=68.47 E-value=18 Score=43.38 Aligned_cols=73 Identities=22% Similarity=0.244 Sum_probs=52.0
Q ss_pred HHHHHHHHhhhcccHHHHHHHHHHHHhhhhhHHHHHHHHHHHH-------HHHHHHHHHHHHhcchhhhhHHhHhHhhhh
Q 006435 245 TEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQ-------WLLIDTLRQLETEKVDLENTVVDESQRQLI 317 (645)
Q Consensus 245 ~e~L~~rL~e~~~~~~~i~~~eqim~~E~s~l~~qL~~~~e~~-------~~L~d~L~~le~ek~~LE~tvv~~sk~~~~ 317 (645)
.+.||.++.....++..++-+.+.+..|-.+||.++..+.+.| ..|+..|..++.+|..||.+|..+-+++-.
T Consensus 441 E~ELRsqis~l~~~Er~lk~eL~qlr~ene~Lq~Kl~~L~~aRq~DKq~l~~LEkrL~eE~~~R~~lEkQL~eErk~r~~ 520 (697)
T PF09726_consen 441 EQELRSQISSLTNNERSLKSELSQLRQENEQLQNKLQNLVQARQQDKQSLQQLEKRLAEERRQRASLEKQLQEERKARKE 520 (697)
T ss_pred HHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 4678888776666677777777777777777777665554332 357788888888889999999877655433
No 95
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=65.04 E-value=4.6 Score=48.19 Aligned_cols=98 Identities=27% Similarity=0.383 Sum_probs=71.9
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
+..|-|.|-+. ||-|.|-|-|-..+|-|-. +++ +. ++..+..
T Consensus 751 ir~g~llK~sk--kgLqqrmfFLfsdillyts-k~~-------~~----------------------------~~~fri~ 792 (1036)
T KOG3531|consen 751 IRSGCLLKLSK--KGLQQRMFFLFSDILLYTS-KGP-------DV----------------------------QKCFRIN 792 (1036)
T ss_pred hhcCCchhhcc--ccchhhhhhhhhhhheecc-CCC-------Ch----------------------------hheeEec
Confidence 57899999763 6779999989777777654 332 11 1222345
Q ss_pred eEEEeccceEEecCC---CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccccc
Q 006435 174 GEVHLKVSSIRDSKS---DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPRMS 230 (645)
Q Consensus 174 G~I~L~~ssi~~~~~---d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~~~ 230 (645)
|.|+|. -.++.+.. -..+|.|.++.++.+..|.+..+..+|+..++.+++..++..
T Consensus 793 g~lP~~-l~~en~en~~s~p~~~ti~~~qk~i~vsast~~~sk~~~~~r~~~i~~~~k~~ 851 (1036)
T KOG3531|consen 793 GDLPLT-LTMENSENEWSVPHCFTISGAQKQIYVSASTRRESKKWEFDRRKAIDLAPKKS 851 (1036)
T ss_pred cCCceE-eeeecccccccCCceEEEeccceEEEEeccchhhhhhhhhccchhhhhccccC
Confidence 777776 34443321 258999999999999999999999999999999999887753
No 96
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=57.82 E-value=13 Score=41.06 Aligned_cols=54 Identities=20% Similarity=0.407 Sum_probs=42.9
Q ss_pred ceEEEeccceEEe----cCCCCccEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 173 FGEVHLKVSSIRD----SKSDDKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 173 ~G~I~L~~ssi~~----~~~d~~~F~I~t~~--rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+..|.|+.|-+.. .+..++.|.|.+++ .++.|||.+.++...|.+||.++...+
T Consensus 215 ~k~IpLKm~yvaR~~~~~DpEnR~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~~l 274 (506)
T KOG3551|consen 215 RKTIPLKMAYVARNLIDADPENRQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVNTL 274 (506)
T ss_pred ccccchhhHHHHhhCCCCCcccceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHhhH
Confidence 5688999875532 23456889999874 789999999999999999999987543
No 97
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=57.24 E-value=63 Score=31.21 Aligned_cols=29 Identities=21% Similarity=0.249 Sum_probs=25.8
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 198 GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 198 ~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+.++|+|++.+.+-+...|+.|++....-
T Consensus 129 pE~vfqLCcS~~E~k~~flK~Irsilre~ 157 (160)
T cd01255 129 PEKVFVLCCSTAESRNAFLKTIRSILRES 157 (160)
T ss_pred CcceEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999987653
No 98
>KOG3523 consensus Putative guanine nucleotide exchange factor TIM [Signal transduction mechanisms]
Probab=56.28 E-value=16 Score=42.54 Aligned_cols=21 Identities=43% Similarity=0.740 Sum_probs=19.5
Q ss_pred eEEEEEcCCHHHHHHHHHHHH
Q 006435 200 KRLHLRAETREDRFAWMEALQ 220 (645)
Q Consensus 200 rt~~L~AeS~~dr~~WI~AL~ 220 (645)
-.|.|+|+|..||++||.||.
T Consensus 571 ~e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 571 TELLLSAESQSDRQRWISALR 591 (695)
T ss_pred eeeeecCCchHHHHHHHHhcC
Confidence 469999999999999999997
No 99
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=54.83 E-value=10 Score=43.80 Aligned_cols=92 Identities=18% Similarity=0.153 Sum_probs=61.1
Q ss_pred ceEEEEEeecCCCCCceeeEEEE---eCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVL---QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL---~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
...+.|.+--..+++|..-|++. ++-+++-|.... + .
T Consensus 498 ~~~s~l~~~~~~~~~g~~a~~~vP~~d~~~~~~Yg~~q--------D--------------------------------v 537 (623)
T KOG4424|consen 498 VICSHLKYMEAAGKTGILAWSVVPKSDPLVDYSYGSPQ--------D--------------------------------V 537 (623)
T ss_pred eehhhHHHHhhcCccceeeeeeccCCCCccccccCCcc--------c--------------------------------c
Confidence 45555555444678899999999 567777777541 1 0
Q ss_pred CCceEEEeccceEEecC----CC-CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 171 KPFGEVHLKVSSIRDSK----SD-DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~----~d-~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
.....|+|..+.+.+.. .| ...|.++-....|||.|+|++-.+.|++-|..|..-
T Consensus 538 ~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~~~~~~~a~~~q~qq~wl~~l~~A~~~ 597 (623)
T KOG4424|consen 538 RAQATIPLPGVEVTIPEFVRREDLFHVFKLVQSHLSWHLAADDEQLQQRWLEVLLLAVSG 597 (623)
T ss_pred ccccccccCccccCCCcccccchhcchhhhhhhcceeeeccCCHHHHHHHHHHHHhhhcc
Confidence 12256667666554211 11 223445556789999999999999999999988654
No 100
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=49.30 E-value=95 Score=28.35 Aligned_cols=35 Identities=9% Similarity=0.222 Sum_probs=29.1
Q ss_pred CCCCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHH
Q 006435 187 KSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQA 221 (645)
Q Consensus 187 ~~d~~~F~I~t-~~rt~~L~AeS~~dr~~WI~AL~~ 221 (645)
++..+.|.+.. +.-.|.|.|.+.++++.|+..|+.
T Consensus 71 PD~~nTFvLK~~~~~eyI~Ea~d~~q~~SWla~Ir~ 106 (107)
T cd01231 71 PDNLYTFVLKVDDNTDIIFEVGDEQQLNSWLAELRY 106 (107)
T ss_pred cCcccEEEEEecCCceEEEEcCCHHHHHHHHHHHhc
Confidence 45578899865 445799999999999999999875
No 101
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=48.19 E-value=31 Score=31.80 Aligned_cols=34 Identities=12% Similarity=0.380 Sum_probs=29.5
Q ss_pred ccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 191 KRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 191 ~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
+-|.|.|......|.|+|..+.+.|++.|+.-..
T Consensus 71 ~yfgL~T~~G~vEfec~~~~~~k~W~~gI~~mL~ 104 (110)
T PF08458_consen 71 RYFGLKTAQGVVEFECDSQREYKRWVQGIQHMLS 104 (110)
T ss_pred EEEEEEecCcEEEEEeCChhhHHHHHHHHHHHHH
Confidence 4466899999999999999999999999987544
No 102
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=44.96 E-value=79 Score=36.84 Aligned_cols=40 Identities=20% Similarity=0.207 Sum_probs=29.4
Q ss_pred ecCCCCccEEEEeCCeEEEEEcCC------------HHHHHHHHHHHHHHHHh
Q 006435 185 DSKSDDKRFSIFTGTKRLHLRAET------------REDRFAWMEALQAVKDM 225 (645)
Q Consensus 185 ~~~~d~~~F~I~t~~rt~~L~AeS------------~~dr~~WI~AL~~a~~~ 225 (645)
..+..+.+|.|.|++-+ |+..++ .+-.+.|-.||+.|.-.
T Consensus 474 p~~~~phcFEI~T~~~v-yfVge~p~~~~~~~~g~g~d~a~~w~~ai~~alMp 525 (888)
T KOG4236|consen 474 PAGTNPHCFEIRTATTV-YFVGENPSSTPGGESGVGLDAAQGWETAIQQALMP 525 (888)
T ss_pred CCCCCCceEEEEeeeEE-EEecCCCCCCccccccccchhhccCchhhhhcccc
Confidence 34566899999999944 455555 55588999999987543
No 103
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=44.44 E-value=30 Score=41.79 Aligned_cols=57 Identities=12% Similarity=0.167 Sum_probs=42.0
Q ss_pred CCceEEEeccceEEecCCCCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 006435 171 KPFGEVHLKVSSIRDSKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~~d~~~F~I~t-~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~~ 229 (645)
..+|.|.+..+.|. ..+.+.+++.. +.++|++.+.+..+++.|+.+++.+.....+.
T Consensus 117 ~~~~~~~~~~a~i~--~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 174 (799)
T KOG1737|consen 117 TCGGGINLVTAWIQ--NGERMDICSVDGSCQIYLVELSKKLQRQGWLHALELAPLIAVEQ 174 (799)
T ss_pred CCCCcccccccccc--cCCCcccchhhcccchhhhhhhHHHhhcchhhhhhhccchhhhc
Confidence 45689998887765 33445555543 36889999999999999999999985544443
No 104
>KOG4047 consensus Docking protein 1 (p62dok) [Signal transduction mechanisms]
Probab=42.00 E-value=12 Score=42.01 Aligned_cols=29 Identities=24% Similarity=0.001 Sum_probs=23.4
Q ss_pred CceEEEEEeecCCCC--CceeeEEEEeCCeE
Q 006435 93 NGISGVLYKWVNYGK--GWRPRWFVLQDGVL 121 (645)
Q Consensus 93 ~~~~G~L~K~~n~~K--gWkrRWFVL~~g~L 121 (645)
..+.|+++-+.+.++ .|+++|.+|..|.+
T Consensus 8 ~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~ 38 (429)
T KOG4047|consen 8 LVKDGVPDNHRNKFKVKNVRDDGAELGSGSM 38 (429)
T ss_pred ccccCccchhhhhhccccccccceeeecccc
Confidence 468899988877665 89999999977654
No 105
>KOG3003 consensus Molecular chaperone of the GrpE family [Posttranslational modification, protein turnover, chaperones]
Probab=41.22 E-value=50 Score=34.26 Aligned_cols=41 Identities=22% Similarity=0.351 Sum_probs=31.3
Q ss_pred CCCCCCCCCCCCC-eEEEEeCCCCEEEEEeccccCCcceeeEEeCCceEEEEEe
Q 006435 503 GRICKPFNPLLGE-TYEADYPDKGLQFFSEKVSHHPMIVACHCQGTGWKFWGDS 555 (645)
Q Consensus 503 ~r~~KPfNPiLGE-Tfe~~~~d~g~r~iaEQVSHHPPIsA~~~e~~g~~~~g~~ 555 (645)
..+..||||.+=| +|++ |+ .--||-+.+|+...||+++|-.
T Consensus 180 dPigekFDPn~HEAvfq~--p~----------~~k~pgtV~~v~k~Gy~L~~R~ 221 (236)
T KOG3003|consen 180 DPIGEKFDPNEHEAVFQV--PD----------AAKEPGTVALVTKKGYKLNGRV 221 (236)
T ss_pred CCCCCCCCcchhheeEec--cc----------cCCCCCeEEEEeccCcccCCee
Confidence 3578999999988 4554 33 2268999999999999998764
No 106
>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain.
Probab=38.72 E-value=1.3e+02 Score=32.53 Aligned_cols=21 Identities=52% Similarity=0.732 Sum_probs=16.3
Q ss_pred HHHHHHHHhcchhhhhHHhHh
Q 006435 292 DTLRQLETEKVDLENTVVDES 312 (645)
Q Consensus 292 d~L~~le~ek~~LE~tvv~~s 312 (645)
..|.++..+|++||++++++-
T Consensus 156 ~~le~Lr~EKVdlEn~LE~EQ 176 (310)
T PF09755_consen 156 EELERLRREKVDLENTLEQEQ 176 (310)
T ss_pred HHHHHHHHHHHhHHHHHHHHH
Confidence 456678889999999988553
No 107
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=35.44 E-value=11 Score=41.14 Aligned_cols=23 Identities=26% Similarity=0.313 Sum_probs=18.0
Q ss_pred ceEEEEEeecC-----CC-CCceeeEEEE
Q 006435 94 GISGVLYKWVN-----YG-KGWRPRWFVL 116 (645)
Q Consensus 94 ~~~G~L~K~~n-----~~-KgWkrRWFVL 116 (645)
.++|+|+|+.. .+ .+||+|||.|
T Consensus 304 ~~eg~~~~r~~~~~~~~~~~~fkk~~f~l 332 (333)
T cd05135 304 VKEGYLHKRKTEGPQLLTRFAFKKRYFWL 332 (333)
T ss_pred hhhhHhhhccccCCCCcccccccceeeec
Confidence 68999999862 22 2699999987
No 108
>KOG2070 consensus Guanine nucleotide exchange factor [Nucleotide transport and metabolism]
Probab=34.21 E-value=55 Score=37.42 Aligned_cols=48 Identities=19% Similarity=0.355 Sum_probs=32.9
Q ss_pred eEEEeccceEEecC---CCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSK---SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQA 221 (645)
Q Consensus 174 G~I~L~~ssi~~~~---~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~ 221 (645)
|.+.+.+-.|+... .-.++|.|...+ -.....++...|.++|+++|+.
T Consensus 353 gKlp~tG~iV~klEdte~~~nafeis~~ti~rIv~~c~~~~~l~~wve~ln~ 404 (661)
T KOG2070|consen 353 GKLPTTGMIVTKLEDTENHRNAFEISGSTIERIVVSCNNQQDLQEWVEHLNK 404 (661)
T ss_pred cccccceeEEeehhhhhcccccccccccchhheeeccCChHHHHHHHHHhhh
Confidence 55555554444321 125788887664 4456678999999999999996
No 109
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function.
Probab=30.32 E-value=1.6e+02 Score=32.29 Aligned_cols=49 Identities=18% Similarity=0.174 Sum_probs=29.2
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHHhHhHh
Q 006435 266 EQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVDESQR 314 (645)
Q Consensus 266 eqim~~E~s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tvv~~sk~ 314 (645)
.|.+++++-..+.-+...+.+...|+..++++.+|+..|+-++....++
T Consensus 108 nqkL~nqL~~~~~vf~k~k~~~q~LE~li~~~~EEn~~lqlqL~~l~~e 156 (401)
T PF06785_consen 108 NQKLKNQLFHVREVFMKTKGDIQHLEGLIRHLREENQCLQLQLDALQQE 156 (401)
T ss_pred HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3445555555555555555555667777777777777776665544433
No 110
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=28.37 E-value=15 Score=39.81 Aligned_cols=24 Identities=25% Similarity=0.342 Sum_probs=18.6
Q ss_pred CceEEEEEeec-C----CCCCceeeEEEE
Q 006435 93 NGISGVLYKWV-N----YGKGWRPRWFVL 116 (645)
Q Consensus 93 ~~~~G~L~K~~-n----~~KgWkrRWFVL 116 (645)
+.++|++.|+. + ..+.||+|||.|
T Consensus 286 ~~k~g~~~~~~~~~~~~~~~~~k~r~~~l 314 (315)
T cd05128 286 VLKEGFMIKRAQGRGRLGRKNFKKRYFRL 314 (315)
T ss_pred hhhhhhhHhhcccCCCccccchhheeeec
Confidence 46899999985 2 235699999998
No 111
>KOG3915 consensus Transcription regulator dachshund, contains SKI/SNO domain [Transcription]
Probab=27.98 E-value=1.6e+02 Score=33.52 Aligned_cols=42 Identities=21% Similarity=0.272 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHHhHhHhhhh
Q 006435 276 LQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVDESQRQLI 317 (645)
Q Consensus 276 l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tvv~~sk~~~~ 317 (645)
|++||+.+++-|..+.+.|+.+.+-|..|.+.|+.++|++..
T Consensus 547 lekql~~ErklR~~~qkr~kkEkk~k~k~qe~L~~~sk~req 588 (641)
T KOG3915|consen 547 LEKQLAMERKLRAIVQKRLKKEKKAKRKLQEALEFESKRREQ 588 (641)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchh
Confidence 345666666666666666666666666666677766665433
No 112
>PF10504 DUF2452: Protein of unknown function (DUF2452); InterPro: IPR019534 This entry contains proteins that have no known function.
Probab=26.48 E-value=54 Score=32.10 Aligned_cols=25 Identities=24% Similarity=0.499 Sum_probs=19.9
Q ss_pred CCCCCCCCCCeEEEEeCCCCEEEEE
Q 006435 506 CKPFNPLLGETYEADYPDKGLQFFS 530 (645)
Q Consensus 506 ~KPfNPiLGETfe~~~~d~g~r~ia 530 (645)
+==|.|+.|+||.+...++|..|++
T Consensus 85 ~cnF~pipG~iYhLY~r~~G~~ylS 109 (159)
T PF10504_consen 85 KCNFEPIPGQIYHLYRRENGQDYLS 109 (159)
T ss_pred ccCceecCCCEEEEEECCCCCEEEE
Confidence 3458899999999998767877766
No 113
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=25.75 E-value=14 Score=39.84 Aligned_cols=25 Identities=32% Similarity=0.667 Sum_probs=19.3
Q ss_pred CceEEEEEeecC----C-CCCceeeEEEEe
Q 006435 93 NGISGVLYKWVN----Y-GKGWRPRWFVLQ 117 (645)
Q Consensus 93 ~~~~G~L~K~~n----~-~KgWkrRWFVL~ 117 (645)
..++|+|.|+.. . .|.||+|||.|.
T Consensus 283 ~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~ 312 (313)
T cd05394 283 HLKEGEMYKRAQGRTRIGKKNFKKRWFCLT 312 (313)
T ss_pred hhHHHHHHhhccCCCccccccchhheeecC
Confidence 368999999852 1 247999999985
No 114
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=25.04 E-value=19 Score=38.95 Aligned_cols=26 Identities=27% Similarity=0.547 Sum_probs=18.8
Q ss_pred CceEEEEEeec-C---C-CCCceeeEEEEeC
Q 006435 93 NGISGVLYKWV-N---Y-GKGWRPRWFVLQD 118 (645)
Q Consensus 93 ~~~~G~L~K~~-n---~-~KgWkrRWFVL~~ 118 (645)
..++|+|.|+. + . .|.||+|||.|.+
T Consensus 280 ~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt~ 310 (310)
T cd05134 280 LLKEGFMIKRAQGRKRFGMKNFKKRWFRLTN 310 (310)
T ss_pred hhhhhhHHHhcccCCcccccchhheeeecCC
Confidence 36899999863 1 1 2468999999853
No 115
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=23.72 E-value=2.4e+02 Score=24.92 Aligned_cols=35 Identities=14% Similarity=0.258 Sum_probs=28.7
Q ss_pred CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 189 DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 189 d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
+...|.+.- ++.|+..|+|.+|+..+|..|-..-.
T Consensus 55 ~~~~F~l~~-~k~y~W~a~s~~Ek~~Fi~~L~k~~~ 89 (91)
T PF15277_consen 55 DTPEFDLTF-DKPYYWEASSAKEKNTFIRSLWKLYQ 89 (91)
T ss_dssp -TTEEEEES-SSEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEE-CCCcEEEeCCHHHHHHHHHHHHHHhc
Confidence 356788877 56999999999999999999876543
No 116
>PF14254 DUF4348: Domain of unknown function (DUF4348); PDB: 3SBU_A.
Probab=23.68 E-value=99 Score=32.80 Aligned_cols=40 Identities=23% Similarity=0.414 Sum_probs=24.4
Q ss_pred cccceEeeeccceeeEEeceeE-EEEe-CCccEEEEEEeecC
Q 006435 588 KVTSSIYNLILGKLYCDHYGTM-RIEG-NREYSCKLKFKEQS 627 (645)
Q Consensus 588 ~p~~~v~nii~G~~~~e~~G~~-~I~~-~tg~~~~l~F~~k~ 627 (645)
.|.-.|+||+.|..|.+-..++ .|++ .+|+.-+|.|+.+|
T Consensus 225 lP~~~i~NI~YGQky~~s~~KIl~~rGi~NG~e~~l~Fk~~~ 266 (273)
T PF14254_consen 225 LPKGKIYNINYGQKYTESNQKILVFRGIANGLETELYFKKRG 266 (273)
T ss_dssp --SSEEEEEESS----T-SEEEEEEEESSS--EEEEEEEEET
T ss_pred CCccceeeeecccccCCCCceEEEEEeecCceeEEEEEEEcC
Confidence 6788999999999999954444 3456 69999999999754
No 117
>KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=23.50 E-value=3.1e+02 Score=31.12 Aligned_cols=48 Identities=19% Similarity=0.223 Sum_probs=37.2
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHHhHhHh
Q 006435 267 QIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVDESQR 314 (645)
Q Consensus 267 qim~~E~s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tvv~~sk~ 314 (645)
|++..++..+..||..+++.+..+-+.|++.+++|...++-+++.-++
T Consensus 335 qr~sd~LE~lrlql~~eq~l~~rm~d~Lrrfq~ekeatqELieelrke 382 (502)
T KOG0982|consen 335 QRSSDLLEALRLQLICEQKLRVRMNDILRRFQEEKEATQELIEELRKE 382 (502)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 568888888889999999999999999998888776655545544444
No 118
>KOG0689 consensus Guanine nucleotide exchange factor for Rho and Rac GTPases [Signal transduction mechanisms]
Probab=22.88 E-value=80 Score=35.91 Aligned_cols=38 Identities=24% Similarity=0.455 Sum_probs=30.5
Q ss_pred CCCCccEEEEeCC----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 187 KSDDKRFSIFTGT----KRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 187 ~~d~~~F~I~t~~----rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
..++.+|.|.... -+|.|+|.|.++.++|+++|-....
T Consensus 320 ~~s~~rF~i~~r~~~~~~~~vlqa~s~~~k~~W~~~i~~~l~ 361 (448)
T KOG0689|consen 320 DNSASRFEIWFRGRKKREAYVLQAGSKEIKYAWTRAISSLLW 361 (448)
T ss_pred CCCCcchhhhhhcccccceeEEeeCCHHHHHHHHHHHHHHHH
Confidence 4557899976543 3699999999999999999877654
No 119
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=21.51 E-value=9.4e+02 Score=25.11 Aligned_cols=81 Identities=20% Similarity=0.206 Sum_probs=41.0
Q ss_pred eEEEeccceEEecCCCCccEEEE-eCCeEEEEEcCC-----HHHHHHHHHHHHHHHHhcccccCC-ccCCCCCcccccHH
Q 006435 174 GEVHLKVSSIRDSKSDDKRFSIF-TGTKRLHLRAET-----REDRFAWMEALQAVKDMFPRMSNS-ELMAPMDSIQVSTE 246 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~-t~~rt~~L~AeS-----~~dr~~WI~AL~~a~~~~~~~~~~-~~~~~~~~~~~s~e 246 (645)
+..|+.+++|.+...- -.... ..+-.+.|-|.+ ++-....-++|+.......||... .-.-..-++.+-..
T Consensus 33 ~eYnITisSIiPTT~~--eIA~raaeGADlvlIATDaD~~GReLA~kf~eeLrg~VGhiERmK~PiGHDvEhiD~elvrk 110 (290)
T COG4026 33 SEYNITISSIIPTTNV--EIAKRAAEGADLVLIATDADRVGRELAEKFFEELRGMVGHIERMKIPIGHDVEHIDVELVRK 110 (290)
T ss_pred ccceeEEEeeccCchH--HHHHHhhccCCEEEEeecCcchhHHHHHHHHHHHHHhhhhhheeccCCCCCccccCHHHHHH
Confidence 5677888887754210 00000 012223333333 445677888888888877775321 11111113344455
Q ss_pred HHHHHHhhhc
Q 006435 247 KLRQLLSEEG 256 (645)
Q Consensus 247 ~L~~rL~e~~ 256 (645)
.|++.|.-.|
T Consensus 111 El~nAlvRAG 120 (290)
T COG4026 111 ELKNALVRAG 120 (290)
T ss_pred HHHHHHHHHH
Confidence 6676666655
No 120
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=21.50 E-value=3.3e+02 Score=28.27 Aligned_cols=24 Identities=25% Similarity=0.297 Sum_probs=10.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHH
Q 006435 271 NEFAPLQSQLLLLKQKQWLLIDTL 294 (645)
Q Consensus 271 ~E~s~l~~qL~~~~e~~~~L~d~L 294 (645)
.|+.+.|.+|+.+.-...+|.+.+
T Consensus 163 ~e~ee~~erlk~le~E~s~LeE~~ 186 (290)
T COG4026 163 AEYEEVQERLKRLEVENSRLEEML 186 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444433433333
No 121
>PRK00846 hypothetical protein; Provisional
Probab=21.42 E-value=3.7e+02 Score=23.29 Aligned_cols=12 Identities=25% Similarity=0.177 Sum_probs=6.1
Q ss_pred HHHHHHHHhhhc
Q 006435 245 TEKLRQLLSEEG 256 (645)
Q Consensus 245 ~e~L~~rL~e~~ 256 (645)
.+.+..||.+..
T Consensus 8 ~~~le~Ri~~LE 19 (77)
T PRK00846 8 DQALEARLVELE 19 (77)
T ss_pred HhhHHHHHHHHH
Confidence 344555555544
No 122
>COG1471 RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis]
Probab=21.08 E-value=8.3e+02 Score=25.59 Aligned_cols=15 Identities=40% Similarity=0.603 Sum_probs=11.1
Q ss_pred CCCCCeEEEEeCCCC
Q 006435 511 PLLGETYEADYPDKG 525 (645)
Q Consensus 511 PiLGETfe~~~~d~g 525 (645)
|-.||-|+..+...|
T Consensus 92 p~tgE~yRvl~d~~g 106 (241)
T COG1471 92 PKTGEHYRVLPDEKG 106 (241)
T ss_pred CCCCceEEEEecCCc
Confidence 567999998875544
No 123
>PF05278 PEARLI-4: Arabidopsis phospholipase-like protein (PEARLI 4); InterPro: IPR007942 This family contains several phospholipase-like proteins from Arabidopsis thaliana and other members of the Streptophyta which are homologous to PEARLI 4.
Probab=20.60 E-value=5.3e+02 Score=27.49 Aligned_cols=53 Identities=21% Similarity=0.287 Sum_probs=33.4
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHhcccccCCcc-----------CCCCCcccccHHHHHHHHhhh
Q 006435 203 HLRAETREDRFAWMEALQAVKDMFPRMSNSEL-----------MAPMDSIQVSTEKLRQLLSEE 255 (645)
Q Consensus 203 ~L~AeS~~dr~~WI~AL~~a~~~~~~~~~~~~-----------~~~~~~~~~s~e~L~~rL~e~ 255 (645)
-++..|..-|...+++|...++.+.......+ ..+.+...+-.++||++|.+.
T Consensus 115 Nc~lkS~~~RS~yLe~Lc~IIqeLq~t~~~~LS~~dl~e~~~~l~DLesa~vkV~WLR~~L~Ei 178 (269)
T PF05278_consen 115 NCKLKSQQFRSYYLECLCDIIQELQSTPLKELSESDLKEMIATLKDLESAKVKVDWLRSKLEEI 178 (269)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHhcCcHhhhhHHHHHHHHHHHHHHHHcCcchHHHHHHHHHH
Confidence 34457788899999999999998743111111 111122345567899998773
Done!