Query 006435
Match_columns 645
No_of_seqs 475 out of 1962
Neff 6.0
Searched_HMMs 29240
Date Tue Mar 26 00:56:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006435.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006435hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zhx_A KES1 protein; oxysterol 100.0 5.4E-62 1.8E-66 532.2 21.8 218 425-643 8-257 (438)
2 2rsg_A Collagen type IV alpha- 99.9 3.3E-23 1.1E-27 178.9 10.6 92 94-223 2-93 (94)
3 3rcp_A Pleckstrin homology dom 99.9 5.5E-22 1.9E-26 173.6 11.4 95 95-227 1-96 (103)
4 2d9x_A Oxysterol binding prote 99.8 8.1E-21 2.8E-25 171.5 10.6 98 93-228 8-108 (120)
5 1v88_A Oxysterol binding prote 99.8 4.3E-20 1.5E-24 170.8 12.0 95 92-227 7-127 (130)
6 2da0_A 130-kDa phosphatidylino 99.8 1.9E-19 6.4E-24 161.2 15.0 98 90-228 7-105 (114)
7 2dhk_A TBC1 domain family memb 99.8 1.1E-19 3.8E-24 164.1 12.9 96 93-228 8-108 (119)
8 1x1f_A Signal-transducing adap 99.8 1E-19 3.4E-24 172.3 12.4 93 93-225 18-114 (149)
9 1wgq_A FYVE, rhogef and PH dom 99.8 6.3E-19 2.1E-23 155.8 13.5 93 93-225 8-104 (109)
10 1pls_A Pleckstrin homology dom 99.8 7.7E-19 2.6E-23 156.0 14.1 95 93-227 5-104 (113)
11 2cod_A Centaurin-delta 1; ARF 99.8 7E-19 2.4E-23 157.0 13.6 93 93-227 8-102 (115)
12 1wi1_A Calcium-dependent activ 99.8 4.9E-19 1.7E-23 162.5 12.6 95 94-228 9-114 (126)
13 2d9v_A Pleckstrin homology dom 99.8 7.2E-19 2.5E-23 161.5 13.8 93 93-225 8-115 (130)
14 4a6h_A Phosphatidylinositol 4, 99.8 4.6E-19 1.6E-23 161.9 12.3 95 93-224 6-118 (120)
15 1v5u_A SBF1, SET binding facto 99.8 4.6E-19 1.6E-23 157.8 11.8 94 93-226 8-113 (117)
16 1v89_A Hypothetical protein KI 99.8 7.8E-19 2.7E-23 156.1 12.6 95 93-227 8-115 (118)
17 1fgy_A GRP1; PH domain, signal 99.8 1.3E-18 4.6E-23 156.8 14.2 96 92-227 4-123 (127)
18 1fao_A Dual adaptor of phospho 99.8 1.2E-18 4.1E-23 157.8 13.8 96 93-228 18-116 (126)
19 2dkp_A Pleckstrin homology dom 99.8 1.5E-18 5.2E-23 157.1 14.3 94 92-225 20-120 (128)
20 2rlo_A Centaurin-gamma 1; spli 99.8 9.9E-19 3.4E-23 159.8 12.4 108 93-225 4-125 (128)
21 1eaz_A Tandem PH domain contai 99.8 1.3E-18 4.4E-23 156.7 12.7 96 92-227 13-114 (125)
22 3aj4_A Pleckstrin homology dom 99.8 6.1E-19 2.1E-23 156.4 10.0 94 91-224 3-111 (112)
23 2i5f_A Pleckstrin; PH domain, 99.8 1.8E-18 6.3E-23 152.0 12.8 91 93-223 7-108 (109)
24 1x05_A Pleckstrin; PH domain, 99.8 2.2E-18 7.6E-23 156.6 13.5 94 93-226 18-122 (129)
25 2dn6_A KIAA0640 protein; PH do 99.8 1.6E-18 5.6E-23 153.7 12.3 95 93-227 8-106 (115)
26 1v5p_A Pleckstrin homology dom 99.8 9.3E-19 3.2E-23 160.9 10.2 98 94-227 16-123 (126)
27 1btk_A Bruton'S tyrosine kinas 99.8 1.8E-18 6.2E-23 166.6 12.2 99 93-227 3-135 (169)
28 1upq_A PEPP1; PH domain, phosp 99.8 3.7E-18 1.3E-22 153.4 13.3 94 92-225 10-110 (123)
29 2yry_A Pleckstrin homology dom 99.8 5.1E-18 1.7E-22 152.3 14.1 93 93-225 22-121 (122)
30 1u5d_A SKAP55, SRC kinase-asso 99.8 1.4E-18 4.8E-23 151.8 10.1 94 93-226 3-107 (108)
31 2lul_A Tyrosine-protein kinase 99.8 5.1E-18 1.7E-22 162.5 13.5 97 93-228 15-125 (164)
32 2d9y_A Pleckstrin homology dom 99.8 7.7E-18 2.6E-22 149.9 13.5 95 92-226 10-111 (117)
33 2y7b_A Actin-binding protein a 99.8 3.5E-18 1.2E-22 156.1 11.4 97 93-226 5-130 (134)
34 2cof_A Protein KIAA1914; PH do 99.7 1.5E-18 5.2E-23 153.4 8.4 92 93-225 8-102 (107)
35 2coc_A FYVE, rhogef and PH dom 99.7 4.7E-18 1.6E-22 153.4 11.6 93 93-226 8-108 (112)
36 2w2x_D 1-phosphatidylinositol- 99.7 4.6E-18 1.6E-22 155.2 11.6 103 93-226 12-121 (124)
37 1btn_A Beta-spectrin; signal t 99.7 6E-18 2E-22 148.0 11.8 94 95-222 1-106 (106)
38 1x1g_A Pleckstrin 2; PH domain 99.7 2.3E-18 7.9E-23 156.3 9.4 93 93-224 18-124 (129)
39 1unq_A RAC-alpha serine/threon 99.7 1E-18 3.4E-23 158.2 6.8 96 93-228 8-114 (125)
40 1u5f_A SRC-associated adaptor 99.7 8.3E-18 2.9E-22 157.1 12.0 97 92-228 16-123 (148)
41 3cxb_B Pleckstrin homology dom 99.7 1.4E-17 4.8E-22 149.4 11.9 93 94-226 1-103 (112)
42 1wg7_A Dedicator of cytokinesi 99.7 7.1E-18 2.4E-22 157.5 10.0 95 93-226 18-126 (150)
43 2p0d_A RHO GTPase-activating p 99.7 2.7E-17 9.2E-22 151.2 12.6 108 92-228 11-128 (129)
44 1wjm_A Beta-spectrin III; PH d 99.7 4E-17 1.4E-21 147.6 13.3 102 92-227 7-120 (123)
45 1u5e_A SRC-associated adaptor 99.7 2.7E-17 9.3E-22 163.9 13.0 97 90-226 103-210 (211)
46 1dyn_A Dynamin; signal transdu 99.7 4.5E-17 1.5E-21 148.4 10.2 90 93-222 12-115 (125)
47 2j59_M RHO-GTPase activating p 99.7 4.5E-17 1.5E-21 155.3 10.4 95 93-225 3-112 (168)
48 3tfm_A Myosin X; split PH doma 99.7 1.3E-16 4.5E-21 160.5 11.0 94 92-225 57-156 (228)
49 2r09_A Cytohesin-3; autoinhibi 99.6 5.1E-16 1.7E-20 165.6 12.7 95 92-226 212-330 (347)
50 3lju_X ARF-GAP with dual PH do 99.6 5E-16 1.7E-20 168.0 11.1 93 93-225 269-373 (386)
51 4h8s_A DCC-interacting protein 99.6 3.6E-16 1.2E-20 169.7 9.5 94 92-226 300-400 (407)
52 3a8p_A T-lymphoma invasion and 99.6 9.3E-16 3.2E-20 157.8 11.6 101 93-227 11-127 (263)
53 1qqg_A IRS-1, insulin receptor 99.6 7.4E-16 2.5E-20 158.6 10.5 95 93-226 10-114 (264)
54 2q13_A DCC-interacting protein 99.6 8E-16 2.7E-20 165.8 10.9 94 92-226 277-377 (385)
55 1dro_A Beta-spectrin; cytoskel 99.6 9.2E-16 3.1E-20 138.9 7.9 102 92-225 7-120 (122)
56 3lju_X ARF-GAP with dual PH do 99.6 4.5E-15 1.5E-19 160.5 11.6 94 92-225 145-247 (386)
57 3tca_A Amyloid beta A4 precurs 99.6 8.7E-15 3E-19 150.5 10.9 92 92-223 167-275 (291)
58 2dtc_A RAL guanine nucleotide 99.5 7.1E-14 2.4E-18 128.5 14.0 103 94-227 2-115 (126)
59 3pp2_A RHO GTPase-activating p 99.5 7.4E-14 2.5E-18 127.3 12.4 104 93-224 8-123 (124)
60 2ys3_A UNC-112-related protein 99.5 2.5E-14 8.7E-19 132.3 8.0 94 93-224 9-112 (137)
61 2rov_A RHO-associated protein 99.5 9.6E-14 3.3E-18 126.1 10.4 94 94-224 2-115 (117)
62 2fjl_A 1-phosphatidylinositol- 99.4 5.9E-13 2E-17 125.3 12.0 132 94-225 2-149 (150)
63 4bbk_A Kindlin-1, fermitin fam 99.4 1.2E-12 4.2E-17 122.8 12.0 94 93-224 26-129 (165)
64 4ejn_A RAC-alpha serine/threon 99.3 2E-12 6.9E-17 140.5 9.3 94 93-226 6-110 (446)
65 4f7h_A Fermitin family homolog 99.3 9.7E-12 3.3E-16 118.0 12.3 95 93-225 47-151 (173)
66 2d9w_A Docking protein 2; PH d 99.3 1.2E-11 4E-16 112.7 12.1 94 93-223 12-120 (127)
67 1w1g_A HPDK1, 3-phosphoinositi 99.2 2E-11 7E-16 114.8 9.4 91 93-227 52-142 (151)
68 3a8n_A TIAM-1, T-lymphoma inva 99.2 2.5E-11 8.7E-16 125.5 8.1 100 93-226 11-126 (279)
69 3hk0_A Growth factor receptor- 99.2 7.6E-11 2.6E-15 120.7 11.3 92 93-224 132-240 (256)
70 4gmv_A RAS-associated and plec 99.1 9.4E-11 3.2E-15 121.4 10.4 96 92-224 157-266 (281)
71 2coa_A Protein kinase C, D2 ty 98.5 2.6E-07 9E-12 84.0 9.2 93 93-225 8-120 (125)
72 2d9z_A Protein kinase C, NU ty 98.4 1.4E-06 4.8E-11 79.5 11.7 93 93-225 8-124 (129)
73 3tfm_A Myosin X; split PH doma 98.4 2.3E-07 8E-12 92.9 5.4 35 93-127 21-55 (228)
74 2lg1_A A-kinase anchor protein 97.9 4.5E-05 1.5E-09 74.2 10.5 100 94-227 72-175 (185)
75 3t06_A PDZ-rhogef, RHO guanine 97.6 0.00042 1.4E-08 74.7 13.4 110 94-226 296-410 (418)
76 3mpx_A FYVE, rhogef and PH dom 97.6 0.00014 4.7E-09 78.8 9.3 93 94-226 245-339 (434)
77 1mai_A Phospholipase C delta-1 97.5 0.00051 1.7E-08 62.9 10.3 39 189-227 84-124 (131)
78 1v5m_A SH2 and PH domain-conta 97.5 0.00042 1.4E-08 63.5 9.3 94 92-225 17-131 (136)
79 2vrw_B P95VAV, VAV1, proto-onc 97.5 0.00051 1.7E-08 73.9 11.6 95 94-227 235-338 (406)
80 1v61_A RAC/CDC42 guanine nucle 97.5 0.00049 1.7E-08 63.5 9.8 97 95-228 30-130 (132)
81 3ml4_A Protein DOK-7; tyrosine 97.4 0.00071 2.4E-08 67.2 11.3 93 93-223 9-112 (224)
82 3p6a_A RHO guanine nucleotide 97.4 0.00096 3.3E-08 70.7 13.2 110 94-226 260-373 (377)
83 1xcg_A PDZ-rhogef, RHO guanine 97.4 0.0013 4.5E-08 69.5 14.1 109 94-225 254-367 (368)
84 2dfk_A Collybistin II; DH doma 97.4 0.00089 3E-08 72.2 12.8 99 94-228 258-367 (402)
85 2pz1_A RHO guanine nucleotide 97.4 0.0008 2.8E-08 73.7 12.7 99 94-228 335-444 (466)
86 1zc3_B Exocyst complex protein 97.4 0.0016 5.6E-08 58.2 12.4 96 94-225 9-108 (113)
87 3qwm_A Iqsec1, IQ motif and SE 97.4 0.00085 2.9E-08 62.4 10.5 88 106-227 30-125 (140)
88 3ky9_A Proto-oncogene VAV; cal 97.3 0.00072 2.4E-08 76.5 11.4 95 94-227 407-510 (587)
89 3odw_A RHO guanine nucleotide 97.3 0.0011 3.9E-08 74.2 12.6 111 94-227 413-527 (536)
90 1dbh_A Protein (human SOS 1); 97.2 0.0014 4.9E-08 69.0 10.7 99 94-225 248-350 (354)
91 1txd_A RHO guanine nucleotide 97.1 0.0029 1E-07 67.4 12.9 112 94-228 258-373 (385)
92 1kz7_A Guanine nucleotide exch 97.1 0.0032 1.1E-07 66.6 12.6 103 94-226 211-327 (353)
93 1nty_A Triple functional domai 96.8 0.007 2.4E-07 62.6 12.0 98 94-225 204-309 (311)
94 2rr3_B OSBP, oxysterol-binding 96.7 0.0013 4.4E-08 48.4 3.6 23 346-368 9-31 (47)
95 2z0q_A XPLN, RHO guanine nucle 96.6 0.011 3.8E-07 61.9 11.9 91 94-224 233-346 (346)
96 2rgn_B RHOA/RAC/CDC42 exchange 96.4 0.018 6.3E-07 60.7 12.0 102 94-226 208-320 (354)
97 3jzy_A Intersectin 2; C2 domai 96.2 0.00079 2.7E-08 74.1 0.0 107 94-226 254-364 (510)
98 1foe_A T-lymphoma invasion and 95.4 0.11 3.6E-06 55.1 12.6 58 170-227 300-369 (377)
99 3ksy_A SOS-1, SON of sevenless 94.8 0.069 2.4E-06 64.5 10.0 98 94-224 445-546 (1049)
100 3v5w_A G-protein coupled recep 92.9 0.6 2.1E-05 53.8 12.4 94 93-228 559-656 (689)
101 3qr0_A Phospholipase C-beta (P 91.0 0.88 3E-05 53.4 11.1 36 189-224 102-142 (816)
102 3zvr_A Dynamin-1; hydrolase, D 89.9 1.9 6.5E-05 50.3 12.6 90 93-222 540-643 (772)
103 1z87_A Alpha-1-syntrophin; pro 89.2 0.83 2.8E-05 46.5 7.9 52 173-224 205-262 (263)
104 2adz_A Alpha-1-syntrophin; pro 89.0 0.77 2.6E-05 44.2 7.0 52 173-224 120-177 (178)
105 1fho_A UNC-89; pleckstrin homo 86.2 1.4 4.7E-05 39.6 6.5 98 93-226 10-114 (119)
106 3ohm_B 1-phosphatidylinositol- 77.5 9.1 0.00031 45.3 10.9 38 188-225 98-140 (885)
107 2zkm_X 1-phosphatidylinositol- 76.9 8.6 0.0003 45.0 10.5 38 189-226 95-137 (799)
108 3hie_A Protein PSL1, exocyst c 54.2 81 0.0028 30.0 10.2 44 182-226 107-150 (171)
109 3iv1_A Tumor susceptibility ge 46.9 66 0.0022 26.7 7.3 58 244-311 8-65 (78)
110 3hnw_A Uncharacterized protein 42.0 1.9E+02 0.0064 26.3 10.4 20 190-209 7-26 (138)
111 2xu6_A MDV1 coiled coil; prote 41.6 79 0.0027 25.8 6.8 43 268-310 18-60 (72)
112 3uux_B Mitochondrial division 37.8 1E+02 0.0036 30.7 8.4 47 268-314 174-220 (242)
113 3a58_A Exocyst complex compone 36.7 1.5E+02 0.005 30.7 9.5 38 188-226 183-220 (320)
114 3ulb_A Target of rapamycin com 36.2 1.2E+02 0.0041 27.2 7.7 53 174-226 57-116 (121)
115 3gp4_A Transcriptional regulat 34.0 2.5E+02 0.0086 25.2 10.0 70 210-295 43-112 (142)
116 1ci6_A Transcription factor AT 34.0 1.3E+02 0.0045 23.5 7.0 46 260-305 12-57 (63)
117 3m91_A Proteasome-associated A 32.8 67 0.0023 24.5 4.8 38 274-311 12-49 (51)
118 2w6b_A RHO guanine nucleotide 30.6 97 0.0033 23.9 5.3 35 276-310 15-49 (56)
119 2wt7_A Proto-oncogene protein 28.2 1.8E+02 0.0061 22.7 6.9 48 261-308 13-60 (63)
120 2fxo_A Myosin heavy chain, car 27.5 2.4E+02 0.0081 25.0 8.5 13 272-284 49-61 (129)
121 2eqb_B RAB guanine nucleotide 25.8 3.1E+02 0.01 23.6 8.3 56 245-307 7-62 (97)
122 1t2k_D Cyclic-AMP-dependent tr 24.5 2.1E+02 0.007 22.0 6.5 46 262-307 13-58 (61)
123 1jnm_A Proto-oncogene C-JUN; B 23.7 1.9E+02 0.0065 22.4 6.2 48 261-308 12-59 (62)
124 3opc_A Uncharacterized protein 21.1 2.1E+02 0.0073 25.7 7.1 56 244-302 5-65 (154)
125 2v66_B Nuclear distribution pr 21.0 3E+02 0.01 24.2 7.6 38 271-308 35-72 (111)
No 1
>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A
Probab=100.00 E-value=5.4e-62 Score=532.21 Aligned_cols=218 Identities=21% Similarity=0.292 Sum_probs=200.8
Q ss_pred cccchhHHHHhhhcC---CCCcccccccccccCcChhhhhhccccchHHHHHHhhcc-------CCCC------HHHHHH
Q 006435 425 EKGVSLWAMIKDNIG---KDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWG-------KRGN------TLMRIL 488 (645)
Q Consensus 425 ~~~~~lwsilK~~iG---kDLskislPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~-------~~~d------~~eRm~ 488 (645)
+.+.++|++++++|| +|||+|+|||+||||+|+||+++++|+|++||+.|+... +..| |++||+
T Consensus 8 ~~~~s~w~~~lK~i~k~g~DLSkIslPv~i~EP~SlLE~~~~~~e~~dLL~~aa~~~~~~~~a~~~~D~~~~~~p~eRm~ 87 (438)
T 1zhx_A 8 YASSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARML 87 (438)
T ss_dssp HTTSHHHHHHHHTTTTCCSCGGGSCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHH
T ss_pred cccccHHHHHHHHhhhcCCChhhcccCchhcCCccHHHHHHHhhhhHHHHhhhhhcccccccccccCCccccCCHHHHHH
Confidence 467899976666665 599999999999999999999999999999999988631 1238 999999
Q ss_pred HHHHHHhhhcccc-------CCCCCCCCCCCCCCeEEEEeCC-----CC-EEEEEeccccCCcceeeEEeCC--ceEEEE
Q 006435 489 NVAAFAVSGYAST-------EGRICKPFNPLLGETYEADYPD-----KG-LQFFSEKVSHHPMIVACHCQGT--GWKFWG 553 (645)
Q Consensus 489 ~V~~f~~S~~~~~-------~~r~~KPfNPiLGETfe~~~~d-----~g-~r~iaEQVSHHPPIsA~~~e~~--g~~~~g 553 (645)
+|++|++|+|++. .++++|||||||||||+|.|+| .| ++||||||||||||+||||+++ ||+++|
T Consensus 88 ~V~af~lS~~~~~y~~~~~~~~~~kKPfNPiLGETFe~~~~d~~~~~~g~~~~iaEQVSHHPPISA~~~e~~~~g~~~~g 167 (438)
T 1zhx_A 88 AVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQG 167 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEE
T ss_pred HHHHHHHhhhhhhcccccccccccccCcCCcccceEEEEecCccCCCCCcEEEEEEeccCCCCeeEEEEEcCCCCEEEEE
Confidence 9999999998753 2688999999999999999976 35 8999999999999999999985 899999
Q ss_pred EeeeeEEEEee-EEEEEeceEEEEEecCCeEEEeecccceEeeeccceeeEEeceeEEEEeCCccEEEEEEeecCccCCC
Q 006435 554 DSNLKSKFWGR-SIQLDPVGVLTLEFDDGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYSCKLKFKEQSIIDRN 632 (645)
Q Consensus 554 ~~~~k~kF~G~-si~v~~~G~~~l~f~~ge~Y~~~~p~~~v~nii~G~~~~e~~G~~~I~~~tg~~~~l~F~~k~~~g~~ 632 (645)
++.+++||||+ ||+|.+.|.++|+|. ||+|+|++|+++|+|||+|++|+|++|+|.|+|+||++|+|+|+++|||||+
T Consensus 168 ~~~~kskF~G~~Sv~v~~~G~~~l~l~-~E~Y~~t~P~~~v~gIi~G~~~vE~~G~~~I~~~tg~~~~l~F~~kg~f~g~ 246 (438)
T 1zhx_A 168 YNQIKASFTKSLMLTVKQFGHTMLDIK-DESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGK 246 (438)
T ss_dssp EEEEEEEECTTCCEEEEEECCEEEEET-TEEEEEECCCEEEECTTTTCCEEEECSEEEEEETTSCEEEEEEECSSSSCSS
T ss_pred EeeeEEEEcCceEEEEEcceEEEEEEC-CcEEEEecCcEEEEEEEecceeEecCCeEEEEcCCCCEEEEEEcCCCCcCCC
Confidence 99999999999 999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeec
Q 006435 633 PHQVHLTELHC 643 (645)
Q Consensus 633 ~~~v~G~I~~~ 643 (645)
+|+|+|+||+.
T Consensus 247 ~n~v~G~I~~~ 257 (438)
T 1zhx_A 247 KNSFKARIYKD 257 (438)
T ss_dssp SSEEEEEEESS
T ss_pred ccEEEEEEEcC
Confidence 99999999973
No 2
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.89 E-value=3.3e-23 Score=178.87 Aligned_cols=92 Identities=35% Similarity=0.606 Sum_probs=83.2
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|||+|+|+..|+||+|||||+++.|+||+++. +...+|.
T Consensus 2 ~k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~--------------------------------------~~~~~~~ 43 (94)
T 2rsg_A 2 ERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSED--------------------------------------ETEYGCR 43 (94)
T ss_dssp CEEEEEEEESSSTTCEEEEEEEEETTEEEEESSTT--------------------------------------GGGTCCS
T ss_pred CEEEEEEEeCCCCCCceEEEEEEECCEEEEEEecc--------------------------------------cccccce
Confidence 58999999999999999999999999999999752 1223478
Q ss_pred eEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
|.|+|..+.+.....+++.|.|.+++|+|+|+|+|++|+++||+||+.|+
T Consensus 44 ~~i~l~~~~~~~~~~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 44 GSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQHK 93 (94)
T ss_dssp EEEETTTCEEEECSSCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHHC
T ss_pred eeEecceeeeecCcccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhhc
Confidence 99999999998888888999999999999999999999999999999885
No 3
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.87 E-value=5.5e-22 Score=173.57 Aligned_cols=95 Identities=34% Similarity=0.763 Sum_probs=83.8
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCce
Q 006435 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (645)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (645)
++|||+|+++..++||+|||||.++.|+||+++.. ...+|+|
T Consensus 1 ~eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~--------------------------------------~~~~~~g 42 (103)
T 3rcp_A 1 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDD--------------------------------------VCKGSKG 42 (103)
T ss_dssp CEEEEEEECCTTTCEEEEEEEEETTEEEEESSCC-----------------------------------------CCCSC
T ss_pred CceEEEEccCCCCCeeceEEEEECCEEEEEecCCc--------------------------------------ccCCccc
Confidence 68999999999999999999999999999997621 1124779
Q ss_pred EEEeccceEEecCCCCccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 175 EVHLKVSSIRDSKSDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 175 ~I~L~~ssi~~~~~d~~~F~I~t~-~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
.|+|..+.+.....+++.|.|.++ +|+|+|+|+|.+|+++||+||+.|+..+.
T Consensus 43 ~i~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~~~ 96 (103)
T 3rcp_A 43 SIKMAVCEIKVHSADNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKASLT 96 (103)
T ss_dssp EEEGGGCEEECCTTCSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTSCCCC
T ss_pred EEEeeeeEEEEcCCCCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHHHhcc
Confidence 999999999887778899999986 89999999999999999999999987764
No 4
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=8.1e-21 Score=171.46 Aligned_cols=98 Identities=30% Similarity=0.558 Sum_probs=85.4
Q ss_pred CceEEEEEeecCCCCCceeeEEEEe--CCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~--~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
+.++|||+|+++..++||+|||||+ ++.|+||+++. +...
T Consensus 8 ~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~--------------------------------------~~~~ 49 (120)
T 2d9x_A 8 ENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQ--------------------------------------SRNQ 49 (120)
T ss_dssp CCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGG--------------------------------------GSSS
T ss_pred CcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCc--------------------------------------ccCC
Confidence 4799999999999999999999997 68999999752 1123
Q ss_pred CCceEEEeccceEEecCCCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 171 KPFGEVHLKVSSIRDSKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
+|+|.|+|..+.|.....+.+.|.|.+++ |+|+|+|+|++|+++||+||+.++.....
T Consensus 50 ~~~g~I~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (120)
T 2d9x_A 50 KPRGTLQLAGAVISPSDEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTE 108 (120)
T ss_dssp CCSEEEECTTCCEECCSSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEcceEEEEecCCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHHhhh
Confidence 47899999999988776678999999986 99999999999999999999999987654
No 5
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.82 E-value=4.3e-20 Score=170.82 Aligned_cols=95 Identities=31% Similarity=0.408 Sum_probs=79.4
Q ss_pred CCceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 92 ~~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
.+.++|||+|++ ..|+||+|||||++++|+|||++. ..+
T Consensus 7 ~v~k~GwL~K~g-~~k~WkrRWfVLk~~~L~yyk~~~----------------------------------------~~~ 45 (130)
T 1v88_A 7 GIVMADWLKIRG-TLKSWTKLWCVLKPGVLLIYKTQK----------------------------------------NGQ 45 (130)
T ss_dssp SCCEEEEEEECC-SSSSCEEEEEEEETTEEEEESCSS----------------------------------------SCC
T ss_pred ceEEEeEEEEeC-CCCCceEEEEEEECCEEEEECCCC----------------------------------------CCC
Confidence 357999999998 889999999999999999999762 134
Q ss_pred CceEEEeccceEEecCCC--CccEEEEeCC------------------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 172 PFGEVHLKVSSIRDSKSD--DKRFSIFTGT------------------------KRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 172 p~G~I~L~~ssi~~~~~d--~~~F~I~t~~------------------------rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
|.|.|+|..+++.+.... ..+|.|.++. ++|+|+|+|++|+++||+||+.|+..
T Consensus 46 p~G~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~ 125 (130)
T 1v88_A 46 WVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS 125 (130)
T ss_dssp CCEEEECSSCEECCCCTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEcCCCEEEECCCCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 789999999998654333 3689998753 45999999999999999999999976
Q ss_pred cc
Q 006435 226 FP 227 (645)
Q Consensus 226 ~~ 227 (645)
.+
T Consensus 126 ~~ 127 (130)
T 1v88_A 126 GP 127 (130)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 6
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.9e-19 Score=161.24 Aligned_cols=98 Identities=21% Similarity=0.373 Sum_probs=84.3
Q ss_pred cCCCceEEEEEeecCCC-CCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccccc
Q 006435 90 IVGNGISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (645)
Q Consensus 90 ~~~~~~~G~L~K~~n~~-KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (645)
..++.++|||+|++... +.|++|||||+++.|+||+++.
T Consensus 7 ~~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~---------------------------------------- 46 (114)
T 2da0_A 7 GYGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATS---------------------------------------- 46 (114)
T ss_dssp CCCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSC----------------------------------------
T ss_pred CCCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCC----------------------------------------
Confidence 34568999999998755 9999999999999999999742
Q ss_pred CCCCceEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 169 NRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
.++.|.|.|..+.+.+.......|.|.++.|+|+|+|+|++|+.+||.||+.|+....+
T Consensus 47 -~~~~~~i~l~~~~v~~~~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 105 (114)
T 2da0_A 47 -NRQPAKLNLLTCQVKPNAEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALT 105 (114)
T ss_dssp -CSCCEEEETTTSEEEECSSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCCCEEEeeeeEEEECCCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHHHHH
Confidence 12458888888888776666789999999999999999999999999999999987654
No 7
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=1.1e-19 Score=164.09 Aligned_cols=96 Identities=23% Similarity=0.488 Sum_probs=82.5
Q ss_pred CceEEEEEeecC--CCCCceeeEEEEeCC--eEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccccc
Q 006435 93 NGISGVLYKWVN--YGKGWRPRWFVLQDG--VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (645)
Q Consensus 93 ~~~~G~L~K~~n--~~KgWkrRWFVL~~g--~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (645)
+.++|||+|+++ ..++||+|||||+++ .|+||+++.
T Consensus 8 ~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~---------------------------------------- 47 (119)
T 2dhk_A 8 KKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQ---------------------------------------- 47 (119)
T ss_dssp CCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTT----------------------------------------
T ss_pred CcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCC----------------------------------------
Confidence 469999999986 789999999999988 999999752
Q ss_pred CCCCceEEEeccceEEec-CCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 169 NRKPFGEVHLKVSSIRDS-KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~-~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
..+|.|.|+|..+.+... ......|.|.++.|+|+|+|+|++|+++||+||+.++..+..
T Consensus 48 ~~~~~g~I~L~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (119)
T 2dhk_A 48 DANPLDSIDLSSAVFDCKADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHN 108 (119)
T ss_dssp CCSCSEEEEGGGCEEEECTTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccEEECCCCEEEecCCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 124789999998877653 234678999999999999999999999999999999987754
No 8
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.81 E-value=1e-19 Score=172.31 Aligned_cols=93 Identities=13% Similarity=0.197 Sum_probs=79.4
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
..++|||+|+++..+.||+|||||+++.|+|||++.+ ..+
T Consensus 18 v~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~d----------------------------------------~~~ 57 (149)
T 1x1f_A 18 LYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKS----------------------------------------IIY 57 (149)
T ss_dssp EEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSC----------------------------------------SSC
T ss_pred ccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCCc----------------------------------------ccc
Confidence 6799999999999999999999999999999997621 235
Q ss_pred ceEEEeccceEEec--C--CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 173 FGEVHLKVSSIRDS--K--SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 173 ~G~I~L~~ssi~~~--~--~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
.|.|+|..+++... . ...+.|.|.++.|+|+|+|+|.+||++||.||+.++..
T Consensus 58 ~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~~ 114 (149)
T 1x1f_A 58 VDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTEL 114 (149)
T ss_dssp SEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHS
T ss_pred CcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHcc
Confidence 69999998866522 2 12468999999999999999999999999999999874
No 9
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.79 E-value=6.3e-19 Score=155.84 Aligned_cols=93 Identities=22% Similarity=0.366 Sum_probs=78.9
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.++|||+|+++..++||+|||||+++.|+||+++. ..+|
T Consensus 8 ~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~----------------------------------------~~~~ 47 (109)
T 1wgq_A 8 STMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASE----------------------------------------DVAA 47 (109)
T ss_dssp CSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTT----------------------------------------CSSC
T ss_pred CeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCC----------------------------------------cCcc
Confidence 479999999999999999999999999999999752 1236
Q ss_pred ceEEEeccceEEecCC---CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 173 FGEVHLKVSSIRDSKS---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~~---d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
.|.|+|..+.+..... ....|.|.++. ++|+|+|+|++|+.+||.||+.|+..
T Consensus 48 ~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~~~ 104 (109)
T 1wgq_A 48 LESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVS 104 (109)
T ss_dssp SEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred CceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 7999999988765432 24689998774 78999999999999999999998754
No 10
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.79 E-value=7.7e-19 Score=156.05 Aligned_cols=95 Identities=24% Similarity=0.369 Sum_probs=81.0
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.++|||+|+++..++||+|||||.++.|+||+++. ..+|
T Consensus 5 ~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----------------------------------------~~~~ 44 (113)
T 1pls_A 5 RIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKS----------------------------------------DNSP 44 (113)
T ss_dssp CSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTT----------------------------------------CSSC
T ss_pred CcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCC----------------------------------------CCCc
Confidence 469999999999999999999999999999999752 1347
Q ss_pred ceEEEeccceEEe-c---CCCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 173 FGEVHLKVSSIRD-S---KSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 173 ~G~I~L~~ssi~~-~---~~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
.|.|+|..+.+.. . ......|.|.++. |+|+|+|+|.+|+.+||.+|+.++....
T Consensus 45 ~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 104 (113)
T 1pls_A 45 KGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIE 104 (113)
T ss_dssp SEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhccc
Confidence 8999999988754 1 2234689999875 9999999999999999999999998764
No 11
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.79 E-value=7e-19 Score=157.00 Aligned_cols=93 Identities=24% Similarity=0.356 Sum_probs=79.8
Q ss_pred CceEEEEEeecC-CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 93 NGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 93 ~~~~G~L~K~~n-~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
+.++|||+|++. ..++||+|||||.++.|+||+++. ..+
T Consensus 8 ~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~----------------------------------------~~~ 47 (115)
T 2cod_A 8 KVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEK----------------------------------------EMY 47 (115)
T ss_dssp CCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSC----------------------------------------CSS
T ss_pred ccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCC----------------------------------------Ccc
Confidence 469999999998 789999999999999999999752 123
Q ss_pred CceEEEeccce-EEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 172 PFGEVHLKVSS-IRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 172 p~G~I~L~~ss-i~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
|.|.|+|..+. |... ++..|.|.++.|+|+|+|+|.+|+++||++|+.++...+
T Consensus 48 ~~g~i~l~~~~~v~~~--~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~~~~~ 102 (115)
T 2cod_A 48 SKGIIPLSAISTVRVQ--GDNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKSQS 102 (115)
T ss_dssp CCCEEETTTEEEEEEE--TTTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHHHHHS
T ss_pred cCCEEECCcceEEEeC--CCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHhCc
Confidence 77999998764 4433 378999999999999999999999999999999996554
No 12
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.79 E-value=4.9e-19 Score=162.49 Aligned_cols=95 Identities=17% Similarity=0.277 Sum_probs=79.3
Q ss_pred ceEEEEEeecC-CCCCceeeEEEEeCCeEEEEE----ecCCCccccchhhhccceeeccchhhhhhhccccccccccccc
Q 006435 94 GISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYK----IHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (645)
Q Consensus 94 ~~~G~L~K~~n-~~KgWkrRWFVL~~g~LsYYk----~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (645)
.++|||+|+|. ..|.||+|||||.+..|+||| ++ .
T Consensus 9 ~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~----------------------------------------~ 48 (126)
T 1wi1_A 9 KHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYRE----------------------------------------K 48 (126)
T ss_dssp EEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCS----------------------------------------S
T ss_pred ceeEEEEEeCCCcccccceEEEEEeCCEEEEEEcccccc----------------------------------------c
Confidence 69999999986 569999999999999999999 43 1
Q ss_pred CCCCceEEEeccceEEec---C---CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 169 NRKPFGEVHLKVSSIRDS---K---SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~---~---~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
...|.|.|.|..++|... . .....|.|.+++++|+|.|+|++||+.||+||..|......
T Consensus 49 ~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~~~~~~ 114 (126)
T 1wi1_A 49 KAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHK 114 (126)
T ss_dssp SSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTCSSC
T ss_pred CCCCceEEECCCcEEEEecCCcccccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHhccccC
Confidence 234889999999988742 1 12356888899999999999999999999999999875543
No 13
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=7.2e-19 Score=161.45 Aligned_cols=93 Identities=30% Similarity=0.508 Sum_probs=73.5
Q ss_pred CceEEEEEeecCCCCCceeeEEEE-eCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL-~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
+.++|||+|+++..|+||+||||| +++.|+||+++.. ..
T Consensus 8 v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~----------------------------------------~~ 47 (130)
T 2d9v_A 8 LVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETA----------------------------------------QD 47 (130)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSST----------------------------------------TS
T ss_pred eeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCCC----------------------------------------CC
Confidence 469999999999999999999999 8999999997621 12
Q ss_pred CceEEEeccc--eEEe-----------cCCCCccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 172 PFGEVHLKVS--SIRD-----------SKSDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 172 p~G~I~L~~s--si~~-----------~~~d~~~F~I~t~-~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
+.|.|.|... .|.. .....+.|.|.+. .|+|+|+|+|++||++||+||+.|+..
T Consensus 48 ~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~ 115 (130)
T 2d9v_A 48 EEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANST 115 (130)
T ss_dssp EEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred cCceEecccceeEEeccccccccCCCCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 4477766532 1211 1223578999984 599999999999999999999999864
No 14
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.79 E-value=4.6e-19 Score=161.86 Aligned_cols=95 Identities=17% Similarity=0.346 Sum_probs=79.3
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.++|||+|++++.|+|++|||||.++.|+|||++.. .....|
T Consensus 6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~-------------------------------------~~d~~P 48 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADR-------------------------------------KKDLVP 48 (120)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCCT-------------------------------------TTCCSC
T ss_pred ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCCc-------------------------------------CcCCCc
Confidence 6899999999999999999999999999999997521 122348
Q ss_pred ceEEEeccceEEecC-C----------CCccEEEEeCC-------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIRDSK-S----------DDKRFSIFTGT-------KRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~-~----------d~~~F~I~t~~-------rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
.|.|.|..|.|.... . ....|.|.+.. ++|+|+|+|.+||++||+||+.+..
T Consensus 49 ~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~~ 118 (120)
T 4a6h_A 49 VMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILTS 118 (120)
T ss_dssp SEEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred eEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 899999999987632 2 45689988754 6999999999999999999998854
No 15
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.79 E-value=4.6e-19 Score=157.81 Aligned_cols=94 Identities=22% Similarity=0.399 Sum_probs=79.2
Q ss_pred CceEEEEEeecCCCCCceeeEEEEe--CCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~--~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
+.++|||+|+++..++||+|||||. ++.|+||+++. ..
T Consensus 8 ~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~----------------------------------------~~ 47 (117)
T 1v5u_A 8 RSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRM----------------------------------------DT 47 (117)
T ss_dssp SSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSS----------------------------------------CS
T ss_pred ccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCC----------------------------------------CC
Confidence 4799999999999999999999999 89999999752 12
Q ss_pred CCceEEEeccceEEecC----------CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 171 KPFGEVHLKVSSIRDSK----------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~----------~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+|+|.|+|..+.+.... .....|.|.++.|+|+|+|+|.+|+++||+||+.++..-
T Consensus 48 ~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 113 (117)
T 1v5u_A 48 ECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSSG 113 (117)
T ss_dssp SCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTCCCC
T ss_pred ccceEEEccCcEEEeecCccccccccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHHhccC
Confidence 37799999987654321 123689999999999999999999999999999987643
No 16
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.78 E-value=7.8e-19 Score=156.08 Aligned_cols=95 Identities=28% Similarity=0.403 Sum_probs=80.6
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.++|||+|++...+.|++|||||.++.|+||+++. ..+|
T Consensus 8 ~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----------------------------------------~~~~ 47 (118)
T 1v89_A 8 PIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEE----------------------------------------DTKP 47 (118)
T ss_dssp EEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSS----------------------------------------CCSC
T ss_pred CcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCC----------------------------------------CCCc
Confidence 479999999999999999999999999999999752 1247
Q ss_pred ceEEEeccceEEecC-----CCCccEEEEe--------CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 173 FGEVHLKVSSIRDSK-----SDDKRFSIFT--------GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~-----~d~~~F~I~t--------~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
.|.|+|..+.+.... .....|.|.+ +.|+|+|+|+|.+|+.+||.||+.|+...+
T Consensus 48 ~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~~ 115 (118)
T 1v89_A 48 QGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGP 115 (118)
T ss_dssp SEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCCS
T ss_pred eEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHccCC
Confidence 899999998876422 2245899988 789999999999999999999999997543
No 17
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.78 E-value=1.3e-18 Score=156.78 Aligned_cols=96 Identities=26% Similarity=0.498 Sum_probs=81.2
Q ss_pred CCceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 92 ~~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
.+.++|||+|+++..++||+|||||.++.|+||+++. ..+
T Consensus 4 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----------------------------------------~~~ 43 (127)
T 1fgy_A 4 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT----------------------------------------DKE 43 (127)
T ss_dssp SCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----------------------------------------CSS
T ss_pred CCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCC----------------------------------------CCC
Confidence 4579999999999999999999999999999999752 134
Q ss_pred CceEEEeccceEEecC--CCCccEEEEeC----------------------CeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 172 PFGEVHLKVSSIRDSK--SDDKRFSIFTG----------------------TKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 172 p~G~I~L~~ssi~~~~--~d~~~F~I~t~----------------------~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
|.|.|+|..+.+.... .....|.|.++ .|+|+|+|+|++|+++||+||+.++...+
T Consensus 44 ~~g~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~ 123 (127)
T 1fgy_A 44 PRGIIPLENLSIREVLDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDP 123 (127)
T ss_dssp CSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHCT
T ss_pred cceEEECCceEEEEccCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccCC
Confidence 7899999999876543 33567888765 37999999999999999999999998664
No 18
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.78 E-value=1.2e-18 Score=157.75 Aligned_cols=96 Identities=22% Similarity=0.332 Sum_probs=81.5
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.++|||+|+++..+.|++|||||.++.|+||+++. ..+|
T Consensus 18 ~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----------------------------------------~~~~ 57 (126)
T 1fao_A 18 GTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQM----------------------------------------SPEP 57 (126)
T ss_dssp TCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----------------------------------------CSSC
T ss_pred ccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCC----------------------------------------CCCc
Confidence 479999999999999999999999999999999752 1347
Q ss_pred ceEEEeccce-EEecC--CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 173 FGEVHLKVSS-IRDSK--SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 173 ~G~I~L~~ss-i~~~~--~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
.|.|+|..+. +.... .....|.|.++.|+|+|+|+|.+|+.+||.||+.++....+
T Consensus 58 ~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 116 (126)
T 1fao_A 58 IRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQIRK 116 (126)
T ss_dssp SEEEEGGGCCEEEEECSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHTC--
T ss_pred eeEEEccceEEEEecccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHHHh
Confidence 8999999887 44332 23578999999999999999999999999999999987643
No 19
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.78 E-value=1.5e-18 Score=157.08 Aligned_cols=94 Identities=24% Similarity=0.317 Sum_probs=79.1
Q ss_pred CCceEEEEEeecC-CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 92 GNGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 92 ~~~~~G~L~K~~n-~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
.+.++|||+|++. ..++||+|||||.++.|+||+++. ..
T Consensus 20 ~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----------------------------------------~~ 59 (128)
T 2dkp_A 20 PVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEK----------------------------------------EE 59 (128)
T ss_dssp CCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT----------------------------------------CC
T ss_pred CcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCC----------------------------------------Cc
Confidence 3579999999987 789999999999999999999752 12
Q ss_pred CCceEEEeccceEEecC-----CCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 171 KPFGEVHLKVSSIRDSK-----SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~-----~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
+|.|.|+|..+.|.... .....|.|.++. |+|+|+|+|++|+++||+||+.|+..
T Consensus 60 ~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 120 (128)
T 2dkp_A 60 GILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALV 120 (128)
T ss_dssp SEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred ccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 36799999988876542 234679999875 99999999999999999999998763
No 20
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.78 E-value=9.9e-19 Score=159.80 Aligned_cols=108 Identities=21% Similarity=0.280 Sum_probs=76.0
Q ss_pred CceEEEEEee-cC-CCCCceeeEEEEe-CCeEEEEEecCCCccccchhh-h-ccceeeccchhhhhhhcccccccccccc
Q 006435 93 NGISGVLYKW-VN-YGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEET-E-RGCKVIGEESTRIISKRKHKKETTSQRL 167 (645)
Q Consensus 93 ~~~~G~L~K~-~n-~~KgWkrRWFVL~-~g~LsYYk~~~~~~i~~~~e~-~-~~~rvig~~~~~~~~~~~~~~~~~~~~~ 167 (645)
+.++|||+|+ ++ ..|+||+|||||+ +|.|+||++.. +. . ...+.|+... .
T Consensus 4 ~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~--------d~~~~~~~~~i~l~~-----------------~ 58 (128)
T 2rlo_A 4 PIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSIN--------DYIHSTHGKEMDLLR-----------------T 58 (128)
T ss_dssp EEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHH--------HHHHTCSCEEEESSS-----------------C
T ss_pred ceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchh--------hhccccCCCeeeeee-----------------e
Confidence 4699999999 54 7899999999998 48999998631 10 0 0001111000 0
Q ss_pred cCCCCceEEEeccceEEec--------CCCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 168 LNRKPFGEVHLKVSSIRDS--------KSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~~--------~~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
....|.|.|.|..+.+.+. ....++|.|.+++ |+|+|+|+|++||++||+||+.++..
T Consensus 59 ~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 59 TVKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp EEECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCccccccccccccccccccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 1122567777777655421 1346789999987 99999999999999999999999865
No 21
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.78 E-value=1.3e-18 Score=156.69 Aligned_cols=96 Identities=22% Similarity=0.411 Sum_probs=81.6
Q ss_pred CCceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 92 ~~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
...++|||+|+++..++|++|||||.++.|+||+++. ..+
T Consensus 13 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----------------------------------------~~~ 52 (125)
T 1eaz_A 13 AVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSEL----------------------------------------EKE 52 (125)
T ss_dssp CCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTT----------------------------------------CSS
T ss_pred CccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCC----------------------------------------CCc
Confidence 3479999999999999999999999999999999752 124
Q ss_pred CceEEEeccce-EEecC-----CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 172 PFGEVHLKVSS-IRDSK-----SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 172 p~G~I~L~~ss-i~~~~-----~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
|.|.|+|..+. +.... .....|.|.++.|+|+|+|+|++|+++||.||+.++....
T Consensus 53 ~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~~~ 114 (125)
T 1eaz_A 53 PLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQR 114 (125)
T ss_dssp CSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred ceeEEEcccceEEeeccccccCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 77999999874 33321 3467899999999999999999999999999999998764
No 22
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.77 E-value=6.1e-19 Score=156.44 Aligned_cols=94 Identities=29% Similarity=0.443 Sum_probs=73.7
Q ss_pred CCCceEEEEEeecCCCCCceeeEEEE-eCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 91 VGNGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 91 ~~~~~~G~L~K~~n~~KgWkrRWFVL-~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
+.+.++|||+|+++..++||+||||| .++.|+||+++..
T Consensus 3 ~~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~~---------------------------------------- 42 (112)
T 3aj4_A 3 MAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTR---------------------------------------- 42 (112)
T ss_dssp CSCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTTC----------------------------------------
T ss_pred cceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCCC----------------------------------------
Confidence 34679999999999999999999999 8999999997521
Q ss_pred CCCceEEEeccceEE-----------ecCCC--CccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 170 RKPFGEVHLKVSSIR-----------DSKSD--DKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~-----------~~~~d--~~~F~I~t~-~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
.+|.|.|+|...+|. ..... ++.|.|.++ .|+|+|+|+|++|+++||+||+.|+.
T Consensus 43 ~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 43 QNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp CSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCCCccccccccceeecccccccccCCCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 124567766644322 11111 358999865 89999999999999999999999873
No 23
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.77 E-value=1.8e-18 Score=151.98 Aligned_cols=91 Identities=29% Similarity=0.544 Sum_probs=76.6
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCC--eEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDG--VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g--~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
+.++|||+|++...++|++|||||.++ .|+||+++. ..
T Consensus 7 ~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~----------------------------------------~~ 46 (109)
T 2i5f_A 7 IIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG----------------------------------------AE 46 (109)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTS----------------------------------------CS
T ss_pred eeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCC----------------------------------------CC
Confidence 479999999999999999999999976 999998641 13
Q ss_pred CCceEEEeccceEEec-CC-------CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLKVSSIRDS-KS-------DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~-~~-------d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
+|.|.|+|..+.+... .. ....|.|.++. ++|+|+|+|.+|+++||.||+.|+
T Consensus 47 ~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 47 DPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp SCSEEEECTTCEEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 4789999999877532 11 45789999985 779999999999999999999986
No 24
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.77 E-value=2.2e-18 Score=156.61 Aligned_cols=94 Identities=29% Similarity=0.514 Sum_probs=79.2
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCC--eEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDG--VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g--~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
+.++|||+|++...++||+|||||.++ .|+||+++. ..
T Consensus 18 ~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~----------------------------------------~~ 57 (129)
T 1x05_A 18 IIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG----------------------------------------AE 57 (129)
T ss_dssp EEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSC----------------------------------------CS
T ss_pred ceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCC----------------------------------------CC
Confidence 479999999999999999999999865 999999641 13
Q ss_pred CCceEEEeccceEEecCC--------CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 171 KPFGEVHLKVSSIRDSKS--------DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~~--------d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+|.|.|+|..+.+..... ....|.|.++. ++|+|+|+|.+|+++||.||+.++...
T Consensus 58 ~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 58 DPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp SCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred cceeEEEccCCEEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence 478999999987764321 35789999975 779999999999999999999999765
No 25
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=1.6e-18 Score=153.74 Aligned_cols=95 Identities=20% Similarity=0.413 Sum_probs=80.4
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.++|||+|+++..+.|++|||||.++.|+||+++. ..+|
T Consensus 8 ~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~----------------------------------------~~~~ 47 (115)
T 2dn6_A 8 VLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSED----------------------------------------LKDK 47 (115)
T ss_dssp CSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTT----------------------------------------CSSE
T ss_pred ceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCC----------------------------------------Cccc
Confidence 479999999999999999999999999999999752 1236
Q ss_pred ceEEEeccc-eEEecC---CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 173 FGEVHLKVS-SIRDSK---SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 173 ~G~I~L~~s-si~~~~---~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
.|.|+|..+ .|.... .....|.|.++.|+|+|+|+|.+|+++||.||+.++....
T Consensus 48 ~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 106 (115)
T 2dn6_A 48 KGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLK 106 (115)
T ss_dssp EEEECCCTTCEEEEECCCTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHh
Confidence 799999964 454432 2346899999999999999999999999999999998764
No 26
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.77 E-value=9.3e-19 Score=160.92 Aligned_cols=98 Identities=22% Similarity=0.306 Sum_probs=76.7
Q ss_pred ceEEEEEeec-CCCCCceeeEEEEe---CCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 94 GISGVLYKWV-NYGKGWRPRWFVLQ---DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 94 ~~~G~L~K~~-n~~KgWkrRWFVL~---~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
.++|||.|++ ...|.||+|||||+ +..|+|||++.. + ...
T Consensus 16 ~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~--~----------------------------------~~~ 59 (126)
T 1v5p_A 16 RICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQN--L----------------------------------AVG 59 (126)
T ss_dssp CEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTT--S----------------------------------CTT
T ss_pred ceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCC--C----------------------------------CCC
Confidence 4799999998 67899999999998 556777786310 0 122
Q ss_pred CCCceEEEecc-ceEEecC-----CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 170 RKPFGEVHLKV-SSIRDSK-----SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 170 ~kp~G~I~L~~-ssi~~~~-----~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
.+|.|.|.|.. +.|.... ....+|.|.++.|+|+|+|+|++|+++||+||+.|....+
T Consensus 60 ~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~~~~ 123 (126)
T 1v5p_A 60 AGAVGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASKSGP 123 (126)
T ss_dssp CCCSEEEETTTCCEEEECCTTTSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTTTSS
T ss_pred ceeeEEEECCCccEEecCCcccCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence 45789999987 4565432 1235788999999999999999999999999999987654
No 27
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.76 E-value=1.8e-18 Score=166.62 Aligned_cols=99 Identities=17% Similarity=0.174 Sum_probs=77.0
Q ss_pred CceEEEEEeecC-----CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccc
Q 006435 93 NGISGVLYKWVN-----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (645)
Q Consensus 93 ~~~~G~L~K~~n-----~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~ 167 (645)
+.++|||.|++. ..++||+|||||+++.|+|||++.. . .
T Consensus 3 vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~--------~----------------------------~ 46 (169)
T 1btk_A 3 VILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFE--------R----------------------------G 46 (169)
T ss_dssp CCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETT--------T----------------------------T
T ss_pred eEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCc--------c----------------------------C
Confidence 469999999963 2578999999999999999998421 0 0
Q ss_pred cCCCCceEEEeccceEE-ec---CCCC-------------------------ccEEEEeCCeEEEEEcCCHHHHHHHHHH
Q 006435 168 LNRKPFGEVHLKVSSIR-DS---KSDD-------------------------KRFSIFTGTKRLHLRAETREDRFAWMEA 218 (645)
Q Consensus 168 ~~~kp~G~I~L~~ssi~-~~---~~d~-------------------------~~F~I~t~~rt~~L~AeS~~dr~~WI~A 218 (645)
...+|+|.|+|..+.+. .. .... ..|.|+++.|+|+|+|+|.+||++||+|
T Consensus 47 ~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~a 126 (169)
T 1btk_A 47 RRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQ 126 (169)
T ss_dssp EEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHH
T ss_pred CCCceeeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHH
Confidence 11237799999976532 22 1111 5789999999999999999999999999
Q ss_pred HHHHHHhcc
Q 006435 219 LQAVKDMFP 227 (645)
Q Consensus 219 L~~a~~~~~ 227 (645)
|+.++..-+
T Consensus 127 I~~~i~~n~ 135 (169)
T 1btk_A 127 LKNVIRYNS 135 (169)
T ss_dssp HHHHHTTCS
T ss_pred HHHHHHHCc
Confidence 999998644
No 28
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.76 E-value=3.7e-18 Score=153.43 Aligned_cols=94 Identities=30% Similarity=0.377 Sum_probs=78.4
Q ss_pred CCceEEEEEeecC-CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 92 GNGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 92 ~~~~~G~L~K~~n-~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
.+.++|||+|++. ..++|++|||||.++.|+||+++. ..
T Consensus 10 ~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~----------------------------------------~~ 49 (123)
T 1upq_A 10 PVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSR----------------------------------------EE 49 (123)
T ss_dssp CEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTT----------------------------------------CC
T ss_pred CceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCC----------------------------------------Cc
Confidence 3579999999984 789999999999999999999752 12
Q ss_pred CCceEEEeccceEEecCC-----CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 171 KPFGEVHLKVSSIRDSKS-----DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~~-----d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
+|.|.|+|..+.|..... ....|.|.+++ |+|+|+|+|.+|+.+||.||+.|+..
T Consensus 50 ~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 50 SVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp SCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred ccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 477999999998876532 24567787876 99999999999999999999999864
No 29
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=5.1e-18 Score=152.33 Aligned_cols=93 Identities=28% Similarity=0.476 Sum_probs=77.0
Q ss_pred CceEEEEEeec-CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 93 NGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 93 ~~~~G~L~K~~-n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
..++|||+|++ +..++|++|||||.++.|+||+++. ..+
T Consensus 22 ~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----------------------------------------~~~ 61 (122)
T 2yry_A 22 VTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEK----------------------------------------EES 61 (122)
T ss_dssp EEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT----------------------------------------CCS
T ss_pred ccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCC----------------------------------------CCC
Confidence 47999999997 5789999999999999999999752 123
Q ss_pred CceEEEeccceEEecC-----CCCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 172 PFGEVHLKVSSIRDSK-----SDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 172 p~G~I~L~~ssi~~~~-----~d~~~F~I~t-~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
|.|.|+|..+.|.... .....|.|.+ +.|+|+|+|+|++|+++||.||+.|+.+
T Consensus 62 ~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 121 (122)
T 2yry_A 62 ILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARV 121 (122)
T ss_dssp CCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHCC
T ss_pred cccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 7799999988765431 1245899875 4799999999999999999999999753
No 30
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.76 E-value=1.4e-18 Score=151.83 Aligned_cols=94 Identities=20% Similarity=0.410 Sum_probs=78.7
Q ss_pred CceEEEEEeecCC----CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccccc
Q 006435 93 NGISGVLYKWVNY----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (645)
Q Consensus 93 ~~~~G~L~K~~n~----~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (645)
+.++|||+|++.. .++|++|||||.++.|+||+++.
T Consensus 3 v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~---------------------------------------- 42 (108)
T 1u5d_A 3 VIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEK---------------------------------------- 42 (108)
T ss_dssp EEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTT----------------------------------------
T ss_pred ccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCC----------------------------------------
Confidence 4689999999743 28999999999999999999752
Q ss_pred CCCCceEEEeccceEEecC---C---CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 169 NRKPFGEVHLKVSSIRDSK---S---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~---~---d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
..+|.|.|+|..+.+.... . ....|.|.++. |+|+|+|+|.+|+++||.||+.|++.+
T Consensus 43 ~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~l 107 (108)
T 1u5d_A 43 SKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLLKDL 107 (108)
T ss_dssp CSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 1247899999999876541 1 24689999987 999999999999999999999998754
No 31
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.75 E-value=5.1e-18 Score=162.50 Aligned_cols=97 Identities=18% Similarity=0.246 Sum_probs=77.3
Q ss_pred CceEEEEEeecCCC-----CCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccc
Q 006435 93 NGISGVLYKWVNYG-----KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (645)
Q Consensus 93 ~~~~G~L~K~~n~~-----KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~ 167 (645)
+.++|||.|++... |.||+|||||+++.|+||+++.
T Consensus 15 ~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~--------------------------------------- 55 (164)
T 2lul_A 15 TILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRA--------------------------------------- 55 (164)
T ss_dssp EEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCS---------------------------------------
T ss_pred eeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccC---------------------------------------
Confidence 37999999997533 4699999999999999999752
Q ss_pred cCCCCceEEEeccceEE-ecC--------CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 168 LNRKPFGEVHLKVSSIR-DSK--------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 168 ~~~kp~G~I~L~~ssi~-~~~--------~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
...+|+|.|.|...... ... .....|.|.++.|+|+|+|+|++||++||+||+.++...+.
T Consensus 56 ~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~~ 125 (164)
T 2lul_A 56 EKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKNNNN 125 (164)
T ss_dssp SSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTTCSC
T ss_pred cccccccEEEEeeeEEEEeccccccCcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHHChh
Confidence 11236799999876432 211 12356899999999999999999999999999999986544
No 32
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=7.7e-18 Score=149.85 Aligned_cols=95 Identities=27% Similarity=0.451 Sum_probs=78.4
Q ss_pred CCceEEEEEeec-CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 92 GNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 92 ~~~~~G~L~K~~-n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
.+.++|||+|++ +..+.|++|||||.++.|+||+++. ..
T Consensus 10 ~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----------------------------------------~~ 49 (117)
T 2d9y_A 10 PVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEK----------------------------------------EE 49 (117)
T ss_dssp CCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTT----------------------------------------CC
T ss_pred CeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCC----------------------------------------CC
Confidence 357999999998 5789999999999999999999752 12
Q ss_pred CCceEEEeccceEEecC-----CCCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 171 KPFGEVHLKVSSIRDSK-----SDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~-----~d~~~F~I~t-~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+|.|.|+|..+.+.... .....|.|.+ +.|+|+|+|+|.+|+++||+||+.|+...
T Consensus 50 ~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 111 (117)
T 2d9y_A 50 SILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQ 111 (117)
T ss_dssp SCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTTCCT
T ss_pred CcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHhhc
Confidence 47799999998875432 1245799865 56999999999999999999999998654
No 33
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.75 E-value=3.5e-18 Score=156.09 Aligned_cols=97 Identities=26% Similarity=0.470 Sum_probs=78.7
Q ss_pred CceEEEEEee--cCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 93 NGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 93 ~~~~G~L~K~--~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
+.++|||+|+ ++..++||+|||||+++.|+||+.+. + ....
T Consensus 5 v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~--------d-----------------------------~~~~ 47 (134)
T 2y7b_A 5 VEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPD--------D-----------------------------EKRK 47 (134)
T ss_dssp CCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHH--------H-----------------------------HTTS
T ss_pred ceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCC--------c-----------------------------cccc
Confidence 4799999999 88889999999999999999999651 1 1223
Q ss_pred CCceEEEeccce---EEecC----CCCccEEEEe--CC------------------eEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLKVSS---IRDSK----SDDKRFSIFT--GT------------------KRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 171 kp~G~I~L~~ss---i~~~~----~d~~~F~I~t--~~------------------rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
+|.|.|+|..+. |.... .....|.|.+ +. |+|+|+|+|++|+.+||.||+.|+
T Consensus 48 ~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i 127 (134)
T 2y7b_A 48 NPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVL 127 (134)
T ss_dssp CCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CceEEEEhhhCccccccccchhhccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHH
Confidence 588999999887 44432 2356899886 32 589999999999999999999998
Q ss_pred Hhc
Q 006435 224 DMF 226 (645)
Q Consensus 224 ~~~ 226 (645)
..+
T Consensus 128 ~~~ 130 (134)
T 2y7b_A 128 VDI 130 (134)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 34
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=1.5e-18 Score=153.40 Aligned_cols=92 Identities=18% Similarity=0.290 Sum_probs=75.1
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.++|||+|+ ..++||+|||||+++.|+||+++.. ..++
T Consensus 8 ~~~~G~L~K~--~~k~Wk~RwfvL~~~~L~yyk~~~~---------------------------------------~~~~ 46 (107)
T 2cof_A 8 LETSSYLNVL--VNSQWKSRWCSVRDNHLHFYQDRNR---------------------------------------SKVA 46 (107)
T ss_dssp CTTCCEEEEE--ETTEEEEEEEEECSSCEEEECSSTT---------------------------------------CSEE
T ss_pred CcEeEEEEEe--cCCCcceEEEEEECCEEEEEeCCcc---------------------------------------cCCC
Confidence 4689999999 7789999999999999999997621 1224
Q ss_pred ceEEEeccceEEecCC--CCccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 173 FGEVHLKVSSIRDSKS--DDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~~--d~~~F~I~t~-~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
.+.|.|..|.|..... ....|.|.++ .|+|+|+|+|.+|+++||+||+.+...
T Consensus 47 ~~~i~l~~~~v~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~~~ 102 (107)
T 2cof_A 47 QQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSESGS 102 (107)
T ss_dssp EEEECTTTCEEECCCBTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHSSC
T ss_pred eeEEeccceEEEECCCCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 5777777777765432 3568999998 899999999999999999999988653
No 35
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=4.7e-18 Score=153.43 Aligned_cols=93 Identities=15% Similarity=0.199 Sum_probs=77.0
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCC---eEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDG---VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g---~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
..+.|||+|+++ ++.||+|||||.++ +|+||+++. .
T Consensus 8 ~~~~G~L~k~~~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~----------------------------------------d 46 (112)
T 2coc_A 8 SLLCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQ----------------------------------------D 46 (112)
T ss_dssp SSSEEEEEEESS-SSCEEEEEEECCTTCTTCEEEECCTT----------------------------------------C
T ss_pred ceEEEEEEecCC-CCCceEEEEEEECCCccEEEEECCCC----------------------------------------c
Confidence 368899999876 89999999999874 899999752 1
Q ss_pred CCCceEEEeccceEEec---CC--CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 170 RKPFGEVHLKVSSIRDS---KS--DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~~~---~~--d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
.+|.|.|.|..++|... .. ....|.|.++.++|+|+|+|++++++||++|+.|....
T Consensus 47 ~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~~~y~f~A~s~e~~~~Wl~al~~A~~~~ 108 (112)
T 2coc_A 47 GRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLSASSAELQQQWLETLSTAAHSG 108 (112)
T ss_dssp SSSCSEECGGGCEEECCCSSSCCSSSEEEEEEETTEEEEEEESSHHHHHHHHHHHHHHHSCC
T ss_pred cCcceEEEcCCCEEEecCcccccCCCCEEEEecCCeEEEEEcCCHHHHHHHHHHHHHHhcCC
Confidence 34789999999999841 11 24578899999999999999999999999999987543
No 36
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.75 E-value=4.6e-18 Score=155.22 Aligned_cols=103 Identities=16% Similarity=0.292 Sum_probs=79.2
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.++|||+|++...+.||+|||||.++.|+||+.+. +.....- ....++
T Consensus 12 ~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~--------~~~~e~~-----------------------plg~~~ 60 (124)
T 2w2x_D 12 HKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIE--------QTMEEDN-----------------------PLGSLC 60 (124)
T ss_dssp -CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHH--------HHHHCSS-----------------------CCCCSC
T ss_pred cceeEEEEEECCCCCCceEeEEEEECCEEEEEcccc--------ccccccc-----------------------ccCCcc
Confidence 479999999999999999999999999999999851 1000000 122446
Q ss_pred ceEEEeccceEEecCCC----CccEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 173 FGEVHLKVSSIRDSKSD----DKRFSIFTG---TKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~~d----~~~F~I~t~---~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
.|.|+|..|.|.....+ ...|.|.++ .++|+|.|+|.+||++||.||+.|+...
T Consensus 61 ~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~ 121 (124)
T 2w2x_D 61 RGILDLNTYNVVKAPQGKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWKI 121 (124)
T ss_dssp SEEEEGGGEEEEECTTCBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred ccEEECCCCEEEEccCCcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHhh
Confidence 79999999998765432 356888775 4789999999999999999999997643
No 37
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.75 E-value=6e-18 Score=147.99 Aligned_cols=94 Identities=15% Similarity=0.275 Sum_probs=74.1
Q ss_pred eEEEEEeec--------CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccc
Q 006435 95 ISGVLYKWV--------NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (645)
Q Consensus 95 ~~G~L~K~~--------n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~ 166 (645)
++|||+|++ ...++|++|||||+++.|+||+++. +...
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~--------~~~~-------------------------- 46 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAK--------SAAS-------------------------- 46 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHH--------HHHH--------------------------
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCc--------cccc--------------------------
Confidence 689999998 7889999999999999999999751 1000
Q ss_pred ccCCCCceEEEeccceEEecC---CCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 006435 167 LLNRKPFGEVHLKVSSIRDSK---SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~---~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
.....+.+.|+|..+.+.... .....|.|.++. ++|+|+|+|.+|+++||.||+.|
T Consensus 47 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 47 GIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp TCCSSSCCCEECTTCEEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred CCCCCCcceEECCCCEEEEcccccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 011235688999887765432 235689999765 99999999999999999999975
No 38
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=2.3e-18 Score=156.27 Aligned_cols=93 Identities=25% Similarity=0.449 Sum_probs=77.4
Q ss_pred CceEEEEEeecCCCCCceeeEEEEe--CCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~--~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
+.++|||+|++...+.||+|||||. ++.|+||+.+. ...
T Consensus 18 ~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~---------------------------------------~~~ 58 (129)
T 1x1g_A 18 VVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSK---------------------------------------EEN 58 (129)
T ss_dssp EEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSS---------------------------------------CCS
T ss_pred EEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCC---------------------------------------cCC
Confidence 4799999999999999999999998 47999999641 123
Q ss_pred CCceEEEeccceEEecCC-----------CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLKVSSIRDSKS-----------DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~~-----------d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
+|+|.|+|..+.+..... ....|.|.++. |+|+|+|+|++|+++||+||+.|+.
T Consensus 59 ~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 59 RPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp SCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred ccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 478999999887654321 35789999986 7899999999999999999999875
No 39
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.75 E-value=1e-18 Score=158.23 Aligned_cols=96 Identities=29% Similarity=0.392 Sum_probs=74.5
Q ss_pred CceEEEEEeecCCCCCceeeEEEEe-CCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~-~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
+.++|||+|+++..++||+|||||+ ++.|+||+++.. .+
T Consensus 8 ~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~----------------------------------------~~ 47 (125)
T 1unq_A 8 IVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQ----------------------------------------DV 47 (125)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCC----------------------------------------SH
T ss_pred eeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCCC----------------------------------------CC
Confidence 4799999999999999999999999 579999997521 11
Q ss_pred CceEEEeccc-----eEE-ecCCCCccEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 172 PFGEVHLKVS-----SIR-DSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 172 p~G~I~L~~s-----si~-~~~~d~~~F~I~t----~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
|.|.|+|..+ .+. .......+|.|.+ +.|+|+|+|+|.+|+.+||.||+.++...+.
T Consensus 48 ~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 114 (125)
T 1unq_A 48 DQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKK 114 (125)
T ss_dssp HHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeEccceeEEeeeecccccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 3355555433 222 2234567899985 5689999999999999999999999987643
No 40
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.74 E-value=8.3e-18 Score=157.08 Aligned_cols=97 Identities=22% Similarity=0.349 Sum_probs=78.2
Q ss_pred CCceEEEEEeecCC----CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccc
Q 006435 92 GNGISGVLYKWVNY----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (645)
Q Consensus 92 ~~~~~G~L~K~~n~----~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~ 167 (645)
.+.++|||+|++.. .++||+|||||+++.|+||+++.
T Consensus 16 ~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~--------------------------------------- 56 (148)
T 1u5f_A 16 FVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK--------------------------------------- 56 (148)
T ss_dssp SEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTT---------------------------------------
T ss_pred CccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCC---------------------------------------
Confidence 34799999999853 37999999999999999999752
Q ss_pred cCCCCceEEEeccceEEecC----C--CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 168 LNRKPFGEVHLKVSSIRDSK----S--DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~~~----~--d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
..+|.|.|+|..+++.... . ....|.|.++. |+|+|+|+|.+|+++||.||+.|+.....
T Consensus 57 -~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 123 (148)
T 1u5f_A 57 -DKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDLGS 123 (148)
T ss_dssp -CSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC----
T ss_pred -CcccceEEEcCCcEEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 1347899999999887532 1 13679999986 99999999999999999999999876543
No 41
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.73 E-value=1.4e-17 Score=149.37 Aligned_cols=93 Identities=19% Similarity=0.283 Sum_probs=74.2
Q ss_pred ceEEEEEeecC----CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 94 GISGVLYKWVN----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 94 ~~~G~L~K~~n----~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
.++|||.|+++ ..+.||+|||||+++.|+|||++. .
T Consensus 1 tkeG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~----------------------------------------~ 40 (112)
T 3cxb_B 1 TKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRT----------------------------------------D 40 (112)
T ss_dssp CEEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSS----------------------------------------C
T ss_pred CceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCC----------------------------------------C
Confidence 37999997744 678999999999999999999752 1
Q ss_pred CCCceEEEeccceEE---e--cCCCCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 170 RKPFGEVHLKVSSIR---D--SKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~---~--~~~d~~~F~I~t-~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
..|.|.|+|..+.+. . .....+.|.|.+ +.++|+|+|+|++|+++||+||+.++...
T Consensus 41 ~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~~~~ 103 (112)
T 3cxb_B 41 VIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSKG 103 (112)
T ss_dssp CSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred CCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHhhcc
Confidence 236799999866433 2 223467899985 57899999999999999999999998754
No 42
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=7.1e-18 Score=157.54 Aligned_cols=95 Identities=19% Similarity=0.262 Sum_probs=79.2
Q ss_pred CceEEEEEeec------CCCCCceeeEEEEeCC-----eEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccc
Q 006435 93 NGISGVLYKWV------NYGKGWRPRWFVLQDG-----VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKE 161 (645)
Q Consensus 93 ~~~~G~L~K~~------n~~KgWkrRWFVL~~g-----~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~ 161 (645)
+.++|||+|++ ...++||+|||||.++ .|+||+++.
T Consensus 18 ~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~--------------------------------- 64 (150)
T 1wg7_A 18 ITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEK--------------------------------- 64 (150)
T ss_dssp CCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSC---------------------------------
T ss_pred eeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCC---------------------------------
Confidence 47999999998 4568999999999887 999999752
Q ss_pred cccccccCCCCceEEEeccceEEecC--CCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 162 TTSQRLLNRKPFGEVHLKVSSIRDSK--SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 162 ~~~~~~~~~kp~G~I~L~~ssi~~~~--~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
...+|.|.|+|..|.+.... .....|.|.++. |+|+|+|+|.+|+.+||.||+.|+...
T Consensus 65 ------~~~~~~g~I~L~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~ 126 (150)
T 1wg7_A 65 ------ISKEPKGSIFLDSCMGVVQNNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLN 126 (150)
T ss_dssp ------CSSCCSEEECTTTCCEECCCCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ------CCCCcCcEEecccCEEEecCCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 12347899999998776543 235789999985 999999999999999999999998743
No 43
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.72 E-value=2.7e-17 Score=151.22 Aligned_cols=108 Identities=22% Similarity=0.347 Sum_probs=79.4
Q ss_pred CCceEEEEEee-----cC-CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccc
Q 006435 92 GNGISGVLYKW-----VN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQ 165 (645)
Q Consensus 92 ~~~~~G~L~K~-----~n-~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~ 165 (645)
.+.++|||.|+ |. ..|.|++|||||+++.|+|||++..... ...+
T Consensus 11 ~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~-------~~~~---------------------- 61 (129)
T 2p0d_A 11 EVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAP-------SSGW---------------------- 61 (129)
T ss_dssp SEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------------------------------
T ss_pred ceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccc-------cccc----------------------
Confidence 34799999995 32 3489999999999999999998621000 0000
Q ss_pred cccCCCCceEEEeccceEEecCC---CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 166 RLLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 166 ~~~~~kp~G~I~L~~ssi~~~~~---d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
......|.|.|+|..|.+..... ..+.|.|.++. ++|+|+|+|.+|+++||+||+.|+...+|
T Consensus 62 ~~~~~~p~g~I~L~~~~v~~~~~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~~~ 128 (129)
T 2p0d_A 62 GPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVR 128 (129)
T ss_dssp -----CCSEEEECTTCEEEECTTSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCccEEEeCCcEEEECCCCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhccC
Confidence 01234588999999998865422 24679999874 78999999999999999999999987654
No 44
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.72 E-value=4e-17 Score=147.60 Aligned_cols=102 Identities=18% Similarity=0.267 Sum_probs=78.9
Q ss_pred CCceEEEEEeecCC--------CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccc
Q 006435 92 GNGISGVLYKWVNY--------GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (645)
Q Consensus 92 ~~~~~G~L~K~~n~--------~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~ 163 (645)
.+.++|||.|++.. .++|++|||||+++.|+|||++. +...
T Consensus 7 ~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~--------~~~~----------------------- 55 (123)
T 1wjm_A 7 GEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAK--------AASA----------------------- 55 (123)
T ss_dssp CCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHH--------HHTT-----------------------
T ss_pred CeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEccc--------cccc-----------------------
Confidence 35799999999865 78999999999999999999752 1100
Q ss_pred cccccCCCCceEEEeccceEEecC---CCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 164 SQRLLNRKPFGEVHLKVSSIRDSK---SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 164 ~~~~~~~kp~G~I~L~~ssi~~~~---~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
....++.+.|+|..+.+.... ...+.|.|.++. ++|+|+|+|++|+++||+||+.++...+
T Consensus 56 ---~~~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~~ 120 (123)
T 1wjm_A 56 ---GVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASGP 120 (123)
T ss_dssp ---TCBSSSCCCEECTTCEEEECTTCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHCC
T ss_pred ---CcccCCCceEEccCcEEeecccccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhccC
Confidence 001123467888877665542 235789998875 9999999999999999999999998654
No 45
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.72 E-value=2.7e-17 Score=163.90 Aligned_cols=97 Identities=22% Similarity=0.369 Sum_probs=80.7
Q ss_pred cCCCceEEEEEeecC----CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccc
Q 006435 90 IVGNGISGVLYKWVN----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQ 165 (645)
Q Consensus 90 ~~~~~~~G~L~K~~n----~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~ 165 (645)
+..+.++|||+|++. ..++||+|||||+++.|+||+++.
T Consensus 103 l~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~------------------------------------- 145 (211)
T 1u5e_A 103 LPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK------------------------------------- 145 (211)
T ss_dssp CSSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTT-------------------------------------
T ss_pred cCCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCC-------------------------------------
Confidence 344689999999986 578999999999999999999752
Q ss_pred cccCCCCceEEEeccceEEecC----C--CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 166 RLLNRKPFGEVHLKVSSIRDSK----S--DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 166 ~~~~~kp~G~I~L~~ssi~~~~----~--d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
..+|.|.|+|..+.+.... . ..+.|.|.++. |+|+|+|+|.+|+.+||.||+.|+..+
T Consensus 146 ---~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~l 210 (211)
T 1u5e_A 146 ---DKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDL 210 (211)
T ss_dssp ---CSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHTT
T ss_pred ---CccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHc
Confidence 1347899999998876531 1 24689999985 999999999999999999999998753
No 46
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.70 E-value=4.5e-17 Score=148.38 Aligned_cols=90 Identities=24% Similarity=0.365 Sum_probs=74.9
Q ss_pred CceEEEEEee-cCCCCC-ceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 93 NGISGVLYKW-VNYGKG-WRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 93 ~~~~G~L~K~-~n~~Kg-WkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
+.++|||+|+ ++.+|+ ||+|||||.+..|+|||+.. ..
T Consensus 12 VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~----------------------------------------ek 51 (125)
T 1dyn_A 12 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDE----------------------------------------EK 51 (125)
T ss_dssp EEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTT----------------------------------------CS
T ss_pred eEEEEEEEEecCccccCCceeeEEEEeccceeeecCCc----------------------------------------cc
Confidence 5899999994 778885 99999999999999999752 12
Q ss_pred CCceEEEeccceEEecCC----CCccEEEEeCC--------eEEEEEcCCHHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLKVSSIRDSKS----DDKRFSIFTGT--------KRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~~----d~~~F~I~t~~--------rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
.|+|.|.|....|++..+ ...+|.|++++ ++|.|.|+|.+|+.+||+||..|
T Consensus 52 e~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 52 EKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp CEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred ccceEEECCCceEeccCCCCCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 367999999998887432 34678898764 59999999999999999999655
No 47
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.69 E-value=4.5e-17 Score=155.27 Aligned_cols=95 Identities=22% Similarity=0.301 Sum_probs=66.5
Q ss_pred CceEEEEE----------eecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccc
Q 006435 93 NGISGVLY----------KWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKET 162 (645)
Q Consensus 93 ~~~~G~L~----------K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~ 162 (645)
+.++|||+ |+++..++|++|||||+++.|+||+++..
T Consensus 3 v~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~--------------------------------- 49 (168)
T 2j59_M 3 AAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKRE--------------------------------- 49 (168)
T ss_dssp CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTC---------------------------------
T ss_pred CcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCcc---------------------------------
Confidence 47999999 77788999999999999999999997621
Q ss_pred ccccccCCCCceEEEecc--ceEEecC---CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 163 TSQRLLNRKPFGEVHLKV--SSIRDSK---SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 163 ~~~~~~~~kp~G~I~L~~--ssi~~~~---~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
....|.|.|.|.. |.+.... .....|.|.+++|+|+|+|+|++|+++||.||+.++..
T Consensus 50 -----~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~~ 112 (168)
T 2j59_M 50 -----QTTPSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSNL 112 (168)
T ss_dssp -----C--------CEECSSCEEEECSSSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred -----cccccCCceEecccceEEEeccccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 0112557777765 5443322 23578999999999999999999999999999998764
No 48
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.67 E-value=1.3e-16 Score=160.48 Aligned_cols=94 Identities=24% Similarity=0.428 Sum_probs=80.5
Q ss_pred CCceEEEEEeecCCC-----CCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccc
Q 006435 92 GNGISGVLYKWVNYG-----KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (645)
Q Consensus 92 ~~~~~G~L~K~~n~~-----KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~ 166 (645)
.+.++|||+|+++.. ++||+|||||+++.|+||+++.
T Consensus 57 ~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~-------------------------------------- 98 (228)
T 3tfm_A 57 EALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDS-------------------------------------- 98 (228)
T ss_dssp CSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTT--------------------------------------
T ss_pred CcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCC--------------------------------------
Confidence 357999999999765 8999999999999999999752
Q ss_pred ccCCCCceEEEeccceEEe-cCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 167 LLNRKPFGEVHLKVSSIRD-SKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~-~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
..+|.|.|+|..+.+.. ....+..|.|.++.|+|+|+|+|++|+++||+||+.++..
T Consensus 99 --~~~~~g~I~L~~~~~v~~~~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 99 --EEKLKGTVEVRSAKEIIDNTNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp --CCSEEEEEEGGGCSEEEEETTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred --CcceeEEEEcCCCEEeccCCCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 12467999999887543 3345678999999999999999999999999999999874
No 49
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.65 E-value=5.1e-16 Score=165.64 Aligned_cols=95 Identities=25% Similarity=0.489 Sum_probs=80.8
Q ss_pred CCceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 92 ~~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
.+.++|||+|+++..++||+|||||+++.|+||+++. ..+
T Consensus 212 ~~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~----------------------------------------~~~ 251 (347)
T 2r09_A 212 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT----------------------------------------DKE 251 (347)
T ss_dssp CCCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----------------------------------------CSS
T ss_pred ccccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCC----------------------------------------ccC
Confidence 3579999999999999999999999999999999752 124
Q ss_pred CceEEEeccceEEecC--CCCccEEEEeC----------------------CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 172 PFGEVHLKVSSIRDSK--SDDKRFSIFTG----------------------TKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 172 p~G~I~L~~ssi~~~~--~d~~~F~I~t~----------------------~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
|+|.|+|..+.+.... ....+|.|.++ .|+|+|+|+|++|+.+||+||+.++...
T Consensus 252 p~G~I~L~~~~v~~~~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~~ 330 (347)
T 2r09_A 252 PRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 330 (347)
T ss_dssp CSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred CcEEEEcCCeEEEEccCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 7899999999876543 33567989875 4899999999999999999999998754
No 50
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.63 E-value=5e-16 Score=168.00 Aligned_cols=93 Identities=25% Similarity=0.388 Sum_probs=76.5
Q ss_pred CceEEEEEeecCCC-CCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 93 NGISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 93 ~~~~G~L~K~~n~~-KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
..++|||.|+++.. ++||+|||||.++.|+||+++. ..+
T Consensus 269 ~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~----------------------------------------d~~ 308 (386)
T 3lju_X 269 YLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPL----------------------------------------DAF 308 (386)
T ss_dssp CSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTT----------------------------------------CSB
T ss_pred cceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCC----------------------------------------Ccc
Confidence 36899999999887 9999999999999999999752 123
Q ss_pred CceEEEeccc----eEEec-C--C-C---CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 172 PFGEVHLKVS----SIRDS-K--S-D---DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 172 p~G~I~L~~s----si~~~-~--~-d---~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
|.|.|.|..+ .+... . . . ...|.|.++.|+|+|+|+|++|+++||.||+.+++.
T Consensus 309 ~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 309 ARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp CSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred cceEEEeecceeeeeecccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 6799999644 23221 1 1 1 366999999999999999999999999999999875
No 51
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.63 E-value=3.6e-16 Score=169.67 Aligned_cols=94 Identities=20% Similarity=0.204 Sum_probs=78.3
Q ss_pred CCceEEEEEee---cCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccccc
Q 006435 92 GNGISGVLYKW---VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (645)
Q Consensus 92 ~~~~~G~L~K~---~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (645)
++.++|||+|+ |..++.|++|||||++|.|+||+...
T Consensus 300 ~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~---------------------------------------- 339 (407)
T 4h8s_A 300 LIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGA---------------------------------------- 339 (407)
T ss_dssp CSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTC----------------------------------------
T ss_pred cceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCC----------------------------------------
Confidence 45799999998 45567899999999999999998531
Q ss_pred CCCCceEEEeccceEEecCCCCc--cEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 169 NRKPFGEVHLKVSSIRDSKSDDK--RFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~~d~~--~F~I~t~~--rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
.++.|.|+|..|+|++....++ +|.|.+++ |+|+|+|+|.+||.+||+||+.|++..
T Consensus 340 -~~~~~~~~l~~~~v~~~~~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~ 400 (407)
T 4h8s_A 340 -VAGGLIQDLDNCSVMAVDCEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNISRQI 400 (407)
T ss_dssp -SSCCCCBCSSCCEEEEECCTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred -CCCCeEEECCceEEEECCCCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 1245888999999987665554 57798875 799999999999999999999999765
No 52
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.62 E-value=9.3e-16 Score=157.79 Aligned_cols=101 Identities=17% Similarity=0.305 Sum_probs=81.2
Q ss_pred CceEEEEE--------eecCC----CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccc
Q 006435 93 NGISGVLY--------KWVNY----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKK 160 (645)
Q Consensus 93 ~~~~G~L~--------K~~n~----~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~ 160 (645)
+.++|||+ |++.. .|+||+|||||+++.|+|||++.....
T Consensus 11 v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~---------------------------- 62 (263)
T 3a8p_A 11 VRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNST---------------------------- 62 (263)
T ss_dssp EEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC-------------------------------
T ss_pred eEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCccccc----------------------------
Confidence 47999999 77777 899999999999999999997531100
Q ss_pred ccccccccCCCCceEEEeccceEEecCC---CCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 161 ETTSQRLLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 161 ~~~~~~~~~~kp~G~I~L~~ssi~~~~~---d~~~F~I~t-~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
....+|.|.|+|..|.+..... ....|.|.+ +.++|+|+|+|.+|+++||+||+.|+...+
T Consensus 63 ------~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~ 127 (263)
T 3a8p_A 63 ------EQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLF 127 (263)
T ss_dssp ---------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ------ccccCccceEEcCCcEEEECCcCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 1223578999999888775322 357899999 689999999999999999999999998764
No 53
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.62 E-value=7.4e-16 Score=158.64 Aligned_cols=95 Identities=20% Similarity=0.331 Sum_probs=74.8
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCC-------eEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccc
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDG-------VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQ 165 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g-------~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~ 165 (645)
+.++|||+|+ |+||+|||||+++ .|+|||++. +..
T Consensus 10 v~k~G~L~K~----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~--------~~~-------------------------- 51 (264)
T 1qqg_A 10 VRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEK--------KWR-------------------------- 51 (264)
T ss_dssp EEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHH--------HHH--------------------------
T ss_pred ccEEEEEEEC----CCCEeEEEEEECCCCCCCCCEEEEECCCc--------ccc--------------------------
Confidence 4799999999 8999999999887 999999751 100
Q ss_pred cccCCCCceEEEeccce-EEec--CCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 166 RLLNRKPFGEVHLKVSS-IRDS--KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 166 ~~~~~kp~G~I~L~~ss-i~~~--~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
....+|+|.|+|..+. |... ......|.|.++.|+|+|+|+|++|+++||+||+.++...
T Consensus 52 -~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 52 -HKSSAPKRSIPLESCFNINKRADSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp -TTCSCCSEEEEGGGEEEEEEECCSSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred -ccccCcceEEEeeceEEEEeccCCCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 0113578999999875 4332 3345789999999999999999999999999999987654
No 54
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.62 E-value=8e-16 Score=165.77 Aligned_cols=94 Identities=18% Similarity=0.235 Sum_probs=75.9
Q ss_pred CCceEEEEEeecCCC---CCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccccc
Q 006435 92 GNGISGVLYKWVNYG---KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (645)
Q Consensus 92 ~~~~~G~L~K~~n~~---KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (645)
++.++|||+|++..+ +.|++|||||++|.|+||++..
T Consensus 277 ~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~~~---------------------------------------- 316 (385)
T 2q13_A 277 LTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARGD---------------------------------------- 316 (385)
T ss_dssp CSCCEEEEEEC--------CCEEEEEEEETTEEEEECSSC----------------------------------------
T ss_pred CccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecCCC----------------------------------------
Confidence 347999999998652 3699999999999999999621
Q ss_pred CCCCceEEEeccceEEecCCCC--ccEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 169 NRKPFGEVHLKVSSIRDSKSDD--KRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~~d~--~~F~I~t~~--rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
..|.|.|+|..|++......+ .+|.|.+++ |+|+|+|+|.+||++||+||+.++...
T Consensus 317 -~~~~~~i~l~~~~v~~~~~~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~ 377 (385)
T 2q13_A 317 -VAGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNISKQI 377 (385)
T ss_dssp -SSCEEEEECTTCEEEEECCTTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHHTTC
T ss_pred -cCCCceEEccceEEEeccccCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 114599999999987654333 578899998 999999999999999999999998765
No 55
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.60 E-value=9.2e-16 Score=138.91 Aligned_cols=102 Identities=17% Similarity=0.275 Sum_probs=76.5
Q ss_pred CCceEEEEEeecC--------CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccc
Q 006435 92 GNGISGVLYKWVN--------YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (645)
Q Consensus 92 ~~~~~G~L~K~~n--------~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~ 163 (645)
++.++|||+|+.. ..+.|++|||||+++.|+|||++. +.... +
T Consensus 7 ~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~--------~~~~~----~----------------- 57 (122)
T 1dro_A 7 GEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQK--------GYKSN----P----------------- 57 (122)
T ss_dssp SSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSS--------HHHHC----T-----------------
T ss_pred ceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCc--------ccccC----C-----------------
Confidence 4579999998753 467899999999999999999863 11000 0
Q ss_pred cccccCCCCceEEEeccceEEecC---CCCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 164 SQRLLNRKPFGEVHLKVSSIRDSK---SDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 164 ~~~~~~~kp~G~I~L~~ssi~~~~---~d~~~F~I~t-~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
.....+.+.|+|..+.+.... ...+.|.|.+ +.++|+|+|+|.+|+++||.||+.++..
T Consensus 58 ---~~~~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 58 ---ELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp ---TCCSSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred ---CcccCCCceEECCCCEEEeCCCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 011123478999887665432 2346799986 6799999999999999999999999864
No 56
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.58 E-value=4.5e-15 Score=160.52 Aligned_cols=94 Identities=18% Similarity=0.328 Sum_probs=76.9
Q ss_pred CCceEEEEEeecCCCCCceeeEEEE--eCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 92 GNGISGVLYKWVNYGKGWRPRWFVL--QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 92 ~~~~~G~L~K~~n~~KgWkrRWFVL--~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
...++|||+|+|...|.||+||||| +++.|+||+++. .
T Consensus 145 ~~~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~----------------------------------------~ 184 (386)
T 3lju_X 145 AGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRND----------------------------------------A 184 (386)
T ss_dssp SSEEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC--------------------------------------------
T ss_pred ccccccceeeeccccCCceEEEEEEEcCCCEEEEECCCC----------------------------------------c
Confidence 3569999999999999999999999 899999999751 2
Q ss_pred CCCceEEEeccceEEecC---CCCccEEEE----eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 170 RKPFGEVHLKVSSIRDSK---SDDKRFSIF----TGTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~---~d~~~F~I~----t~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
.+|.|.|.|....+...+ .....|.|. +++|+|+|.|+|.+|+.+||+||+.|+..
T Consensus 185 ~~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~~ 247 (386)
T 3lju_X 185 KEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFH 247 (386)
T ss_dssp -CCSEEEEGGGEEEEECHHHHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCcccEEEeeccEEEEcccccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhcccc
Confidence 348899999986555432 356788887 77899999999999999999999988643
No 57
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.55 E-value=8.7e-15 Score=150.51 Aligned_cols=92 Identities=16% Similarity=0.226 Sum_probs=71.6
Q ss_pred CCceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 92 ~~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
.+.++|||+|++...|+||+|||||+++.|+||++... .+
T Consensus 167 ~p~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~~----------------------------------------~~ 206 (291)
T 3tca_A 167 VPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKT----------------------------------------KT 206 (291)
T ss_dssp CCCCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTCC----------------------------------------SS
T ss_pred CCceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCcc----------------------------------------cc
Confidence 46799999999999999999999999999999997521 12
Q ss_pred CceEEEe---ccceEEecC--------CCCccEEEEeCC------eEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 172 PFGEVHL---KVSSIRDSK--------SDDKRFSIFTGT------KRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 172 p~G~I~L---~~ssi~~~~--------~d~~~F~I~t~~------rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
|+|.|.| .++.+.... .....|.|.++. ++|+|+|+|++|+..||.||+.|+
T Consensus 207 ~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 207 SRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp TTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 4455544 455443321 234678998753 679999999999999999999886
No 58
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.54 E-value=7.1e-14 Score=128.54 Aligned_cols=103 Identities=15% Similarity=0.221 Sum_probs=79.5
Q ss_pred ceEEEEEee-----cCC--CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccc
Q 006435 94 GISGVLYKW-----VNY--GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (645)
Q Consensus 94 ~~~G~L~K~-----~n~--~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~ 166 (645)
.++|+|.++ |.. .+.|++|||||.+..|+||+.+.-.. .+ + .
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~----~~-------------------------~--~ 50 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRG----TD-------------------------R--K 50 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCC----SS-------------------------G--G
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEccccccc----cc-------------------------c--c
Confidence 588999854 654 58899999999999999999652100 00 0 1
Q ss_pred ccCCCCceEEEeccceEEecC--CCCccEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 167 LLNRKPFGEVHLKVSSIRDSK--SDDKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~--~d~~~F~I~t~--~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
+....|.|.|.|.++.|.... ..+..|.|.++ +..|.|+|+|.+++.+||+||..|+...+
T Consensus 51 ~~~~~P~~~i~L~g~~V~~~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~~ 115 (126)
T 2dtc_A 51 HYKSTPGKKVSIVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSR 115 (126)
T ss_dssp GBCSSCSEEEECTTCEEECCCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSCC
T ss_pred ccccCCCceEEeCCCEEEecCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcCC
Confidence 223468999999999997432 23568999865 78999999999999999999999998653
No 59
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.52 E-value=7.4e-14 Score=127.35 Aligned_cols=104 Identities=19% Similarity=0.288 Sum_probs=75.3
Q ss_pred CceEEEEEeec-----C--CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccc
Q 006435 93 NGISGVLYKWV-----N--YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQ 165 (645)
Q Consensus 93 ~~~~G~L~K~~-----n--~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~ 165 (645)
+.++|||+|+. . ..+.|++|||||+++.|+|||++..... + |. ..+
T Consensus 8 v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~--------~----~~-------------~~~-- 60 (124)
T 3pp2_A 8 LDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAA--------G----GL-------------RQP-- 60 (124)
T ss_dssp -CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---------------CB-------------CCG--
T ss_pred EEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccc--------c----Cc-------------cCc--
Confidence 47999999872 1 2248999999999999999997631100 0 00 000
Q ss_pred cccCCCCceEEEeccceEEecC----CCCccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 166 RLLNRKPFGEVHLKVSSIRDSK----SDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 166 ~~~~~kp~G~I~L~~ssi~~~~----~d~~~F~I~t~-~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
.....|.+.|+|..|.+.... ...+.|.|.++ +++|.|+|+|.+|+++||.+|+.|++
T Consensus 61 -~~~~~~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 61 -SKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp -GGGCSEEEEEECTTCEEEECCGGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred -ccccCCcceEEcCCCEEEecccccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 000246799999999876542 23567999875 58999999999999999999999985
No 60
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=2.5e-14 Score=132.33 Aligned_cols=94 Identities=20% Similarity=0.408 Sum_probs=74.3
Q ss_pred CceEEEEEeec---CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 93 NGISGVLYKWV---NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 93 ~~~~G~L~K~~---n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
+.+++||...+ ...|+||+|||||+++.|+|||++.. ..
T Consensus 9 pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee--------------------------------------~~ 50 (137)
T 2ys3_A 9 PELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDE--------------------------------------AP 50 (137)
T ss_dssp CCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTT--------------------------------------TT
T ss_pred cchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchh--------------------------------------cc
Confidence 57899999985 35689999999999999999998621 11
Q ss_pred CCCceEEEeccceEEecCC-CCccEE--EEeC----CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 170 RKPFGEVHLKVSSIRDSKS-DDKRFS--IFTG----TKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~-d~~~F~--I~t~----~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
..|.|.|+|..|.|.++.. ....|. +..| .|+|+|+|+|++++++||+||+.|..
T Consensus 51 ~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAsk 112 (137)
T 2ys3_A 51 GDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLASK 112 (137)
T ss_dssp SCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred CCCceEEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHhcc
Confidence 2478999999999876621 234554 4444 49999999999999999999998763
No 61
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.48 E-value=9.6e-14 Score=126.06 Aligned_cols=94 Identities=19% Similarity=0.338 Sum_probs=71.6
Q ss_pred ceEEEEEe--ecCCCC-CceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 94 GISGVLYK--WVNYGK-GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 94 ~~~G~L~K--~~n~~K-gWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
.++|||.+ +++..| +|++|||||.++.|+||+.+. + ....
T Consensus 2 ~~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~--------~-----------------------------~~~~ 44 (117)
T 2rov_A 2 RLEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQ--------D-----------------------------KEQS 44 (117)
T ss_dssp CSEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHH--------H-----------------------------HHTT
T ss_pred ceEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCC--------C-----------------------------cccC
Confidence 36999996 888888 999999999999999999751 1 0123
Q ss_pred CCceEEEeccce-EEec---------CC-CCccEEEEeC------CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLKVSS-IRDS---------KS-DDKRFSIFTG------TKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 171 kp~G~I~L~~ss-i~~~---------~~-d~~~F~I~t~------~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
+|.|.|+|.... |+.. +. -++.|.|.+. .++|+|.|+|.+|+++||.||+.++.
T Consensus 45 ~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 45 NPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp CCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred CceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 477999985432 2211 11 1356999763 59999999999999999999998764
No 62
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.43 E-value=5.9e-13 Score=125.30 Aligned_cols=132 Identities=18% Similarity=0.181 Sum_probs=79.5
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhh-ccce----eeccchhhhhhhcccccccc---c-
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETE-RGCK----VIGEESTRIISKRKHKKETT---S- 164 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~-~~~r----vig~~~~~~~~~~~~~~~~~---~- 164 (645)
.++|||+|++...+.|++|||||.++.|+|++......-...++.. .++. .++.+-.--++.+..+...+ .
T Consensus 2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l~E 81 (150)
T 2fjl_A 2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHLDE 81 (150)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSSCT
T ss_pred CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcccc
Confidence 4899999999999999999999999999999833210000000000 0000 00000000000000000000 0
Q ss_pred ccccCCCCceEEEeccceEEecCC----CCccEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 165 QRLLNRKPFGEVHLKVSSIRDSKS----DDKRFSIFTG---TKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 165 ~~~~~~kp~G~I~L~~ssi~~~~~----d~~~F~I~t~---~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
....+.-.+|.|+|.+|.|..... ....|.|.++ .++|.|.|+|.+|+.+||+||+.|+..
T Consensus 82 ~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~~ 149 (150)
T 2fjl_A 82 NSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQT 149 (150)
T ss_dssp TTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred cccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 001222246999999999976542 2356788876 469999999999999999999999753
No 63
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.40 E-value=1.2e-12 Score=122.85 Aligned_cols=94 Identities=20% Similarity=0.400 Sum_probs=71.0
Q ss_pred CceEEEEEeec---CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 93 NGISGVLYKWV---NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 93 ~~~~G~L~K~~---n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
+.+.|||.... -..|+||+||||++|+.|+|||++ +| ..
T Consensus 26 PeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSk--------Ee------------------------------~~ 67 (165)
T 4bbk_A 26 PKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNK--------EL------------------------------EQ 67 (165)
T ss_dssp CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSG--------GG------------------------------TT
T ss_pred hhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCH--------HH------------------------------hc
Confidence 46889997753 457999999999999999999987 22 11
Q ss_pred CCCceEEEeccceEEecC-CCCccEE--EEe----CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 170 RKPFGEVHLKVSSIRDSK-SDDKRFS--IFT----GTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~-~d~~~F~--I~t----~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
..|.+.|+|++|.|.++- ....+|. +.. +...++|+|+++.++.+||.|++.|..
T Consensus 68 geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 68 GEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred CCCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhccc
Confidence 347899999999998652 2334444 322 357999999999999999999999876
No 64
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.32 E-value=2e-12 Score=140.52 Aligned_cols=94 Identities=30% Similarity=0.402 Sum_probs=69.1
Q ss_pred CceEEEEEeecCCCCCceeeEEEEe-CCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~-~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
+.++|||.|+|+..|.||+|||||+ ++.|.|||++.. ..
T Consensus 6 v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~~----------------------------------------~~ 45 (446)
T 4ejn_A 6 IVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQ----------------------------------------DV 45 (446)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC-------------------------------------------
T ss_pred EEEEeeEEeeccccccccceEEEEeeCCEEEEEecCCC----------------------------------------CC
Confidence 5789999999999999999999997 899999997621 11
Q ss_pred CceEEEeccc-----eEEe-cCCCCccEEEEeCC-eEE---EEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 172 PFGEVHLKVS-----SIRD-SKSDDKRFSIFTGT-KRL---HLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 172 p~G~I~L~~s-----si~~-~~~d~~~F~I~t~~-rt~---~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+.|.|+|... .+.. ....+++|.|.+.. +++ .+.+++.++++.|+.||+.++...
T Consensus 46 ~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~~ 110 (446)
T 4ejn_A 46 DQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGL 110 (446)
T ss_dssp ----CCCGGGBCTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCCC-
T ss_pred ccCcccccCccccceeecCCCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhhhh
Confidence 3466666653 3322 23336789998753 343 789999999999999999996544
No 65
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.32 E-value=9.7e-12 Score=117.95 Aligned_cols=95 Identities=19% Similarity=0.362 Sum_probs=74.4
Q ss_pred CceEEEEEeec---CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccC
Q 006435 93 NGISGVLYKWV---NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (645)
Q Consensus 93 ~~~~G~L~K~~---n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (645)
+...+||.... -..|+||+||||++|+.|+|||++. + ..
T Consensus 47 PeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskE--------e------------------------------~~ 88 (173)
T 4f7h_A 47 PELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKE--------E------------------------------SS 88 (173)
T ss_dssp TCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGG--------G------------------------------CS
T ss_pred hhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHh--------H------------------------------hc
Confidence 46899997753 3579999999999999999999872 2 11
Q ss_pred CCCceEEEeccceEEecC-CCCccEEEE---e---CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 170 RKPFGEVHLKVSSIRDSK-SDDKRFSIF---T---GTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~-~d~~~F~I~---t---~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
..|.|.|+|++|.|.++- ....+|.|. . +.+.++|+|+++..+.+||.|++.|..-
T Consensus 89 geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLAskG 151 (173)
T 4f7h_A 89 GTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKG 151 (173)
T ss_dssp SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred CCCceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHHHHHHHHhhhhccC
Confidence 347899999999998752 223445432 2 4689999999999999999999998653
No 66
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=1.2e-11 Score=112.69 Aligned_cols=94 Identities=19% Similarity=0.205 Sum_probs=73.2
Q ss_pred CceEEEEEeec--CCCCCceeeEEEEeC------CeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccc
Q 006435 93 NGISGVLYKWV--NYGKGWRPRWFVLQD------GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (645)
Q Consensus 93 ~~~~G~L~K~~--n~~KgWkrRWFVL~~------g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~ 164 (645)
+.++|||+++. ..+|.||+|||||.. .-|-||..+.. .
T Consensus 12 ~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek--~-------------------------------- 57 (127)
T 2d9w_A 12 AVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEK--P-------------------------------- 57 (127)
T ss_dssp SSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSC--S--------------------------------
T ss_pred cccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCc--c--------------------------------
Confidence 46999999997 688899999999943 45999997521 0
Q ss_pred ccccCCCCceEEEeccc-eEEecCC------CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 165 QRLLNRKPFGEVHLKVS-SIRDSKS------DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 165 ~~~~~~kp~G~I~L~~s-si~~~~~------d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
..+..|+.+|.|..| +|.+... +...|.|.|+.|+|.|.|++ .++.+||.+|....
T Consensus 58 --~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~er~~~laAe~-~E~~~Wi~~ic~~a 120 (127)
T 2d9w_A 58 --RRCEAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPA-AERGDWVQAICLLA 120 (127)
T ss_dssp --SSCSCCEEEECGGGEEEEEECCSCSSSCSSCEEEEEEESSCEEEEEECH-HHHHHHHHHHHHHH
T ss_pred --ccCCCCceEEEhhhCCeEecccCccCCCCcceEEEEEeCCcEEEEEeCc-HHHHHHHHHHHHHh
Confidence 122347799999998 5554432 23679999999999999996 58999999999865
No 67
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.23 E-value=2e-11 Score=114.77 Aligned_cols=91 Identities=20% Similarity=0.117 Sum_probs=73.0
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.+.|||.|+.+++ ||+|||+|.++-+.||-+... . ..
T Consensus 52 Ilk~G~v~KrkGl~--~kkR~liLT~~PrL~Yvdp~~--------------------------------------~--~~ 89 (151)
T 1w1g_A 52 ILKMGPVDKRKGLF--ARRRQLLLTEGPHLYYVDPVN--------------------------------------K--VL 89 (151)
T ss_dssp EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTT--------------------------------------T--EE
T ss_pred EEEEEEEEecccCc--ceeEEEEEcCCceEEEEcCcc--------------------------------------c--cc
Confidence 47999999976554 999999999999999997521 1 12
Q ss_pred ceEEEeccceEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
+|+|+|..+.-.+.. .++.|.|.|++|+|+|.|. ..++++|++||+.++..+.
T Consensus 90 KGeIpls~~l~ve~k-~~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~~~~~ 142 (151)
T 1w1g_A 90 KGEIPWSQELRPEAK-NFKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVWRQRY 142 (151)
T ss_dssp EEEECCCTTCEEEES-SSSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHHHHHH
T ss_pred cceEecCCCeeEEEc-CCCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHHHHHh
Confidence 499999875332233 3779999999999999997 8899999999999997753
No 68
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.18 E-value=2.5e-11 Score=125.51 Aligned_cols=100 Identities=17% Similarity=0.287 Sum_probs=75.4
Q ss_pred CceEEEEEee-----cC-------CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccc
Q 006435 93 NGISGVLYKW-----VN-------YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKK 160 (645)
Q Consensus 93 ~~~~G~L~K~-----~n-------~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~ 160 (645)
+.++|||.++ +. ..+.|++|||||+++.|+|||++.....
T Consensus 11 v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~---------------------------- 62 (279)
T 3a8n_A 11 VRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGI---------------------------- 62 (279)
T ss_dssp CSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC---------------------------------
T ss_pred eeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEeccccccc----------------------------
Confidence 5799999764 11 2468999999999999999997631100
Q ss_pred ccccccccCCCCceEEEeccceEEecCC---CCccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 161 ETTSQRLLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 161 ~~~~~~~~~~kp~G~I~L~~ssi~~~~~---d~~~F~I~t~-~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+....|.|.|.|..+.+..... ....|.|.++ .+.|.|+|+|.+|++.||.||+.|+..+
T Consensus 63 ------~~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~~ 126 (279)
T 3a8n_A 63 ------DHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAA 126 (279)
T ss_dssp ---------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ------ccccCCCceEeccCcEEEeccccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 1123477899999998874332 2457999764 6899999999999999999999999865
No 69
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.18 E-value=7.6e-11 Score=120.65 Aligned_cols=92 Identities=23% Similarity=0.213 Sum_probs=70.5
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.++|||+++....|+|++|||+|+++.|+||++... ..+
T Consensus 132 P~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~s----------------------------------------k~~ 171 (256)
T 3hk0_A 132 PEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTS----------------------------------------AAP 171 (256)
T ss_dssp EEEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTTC----------------------------------------CCG
T ss_pred CcceeEEEEecCCCCcceEEEEEEeCCEEEEEecCCC----------------------------------------Ccc
Confidence 5799999999877899999999999999998885410 012
Q ss_pred ceE---EEeccceEEec--------CCCCccEEEEeCCe------EEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 173 FGE---VHLKVSSIRDS--------KSDDKRFSIFTGTK------RLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 173 ~G~---I~L~~ssi~~~--------~~d~~~F~I~t~~r------t~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
++. ++|....|... +..+.+|+|..... .++|+|++++++..||.||+.|+-
T Consensus 172 r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 172 RHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp GGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 233 57776666432 23356788886533 599999999999999999999974
No 70
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.15 E-value=9.4e-11 Score=121.37 Aligned_cols=96 Identities=17% Similarity=0.218 Sum_probs=71.1
Q ss_pred CCceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 92 ~~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
.+.++|||++++...|+|++|||||+++.|+||++... .+ ...
T Consensus 157 ~pe~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~s------k~-------------------------------~r~ 199 (281)
T 4gmv_A 157 VPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKA------KV-------------------------------SRD 199 (281)
T ss_dssp CCCCEEEEEEECTTSSCEEEEEEEECSSCEEEC----------------------------------------------C
T ss_pred CCccEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCCC------Cc-------------------------------ccc
Confidence 35699999999888899999999999999999986421 00 001
Q ss_pred CceEEEeccceEEec--------CCCCccEEEEeCC------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 172 PFGEVHLKVSSIRDS--------KSDDKRFSIFTGT------KRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 172 p~G~I~L~~ssi~~~--------~~d~~~F~I~t~~------rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
..+.++|..+.|... +..+.+|+|..+. .+++|+|++++++..||.||+.|+-
T Consensus 200 l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 200 LVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp CEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 235668887766542 3447789998643 5799999999999999999999974
No 71
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.53 E-value=2.6e-07 Score=84.02 Aligned_cols=93 Identities=12% Similarity=0.201 Sum_probs=72.8
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.++|||-+.++.-+.||||||+|+...+.||++.. ..++
T Consensus 8 vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e~----------------------------------------~~~~ 47 (125)
T 2coa_A 8 TLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNT----------------------------------------TNRY 47 (125)
T ss_dssp CSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSS----------------------------------------CSSC
T ss_pred eeecceEEEEccCCccccceeeEecCCeEEEEecCC----------------------------------------CCce
Confidence 479999999999999999999999999999999742 2335
Q ss_pred ceEEEecc-ceEEec--------CCCCccEEEEeCCeEEEEEcC-----------CHHHHHHHHHHHHHHHHh
Q 006435 173 FGEVHLKV-SSIRDS--------KSDDKRFSIFTGTKRLHLRAE-----------TREDRFAWMEALQAVKDM 225 (645)
Q Consensus 173 ~G~I~L~~-ssi~~~--------~~d~~~F~I~t~~rt~~L~Ae-----------S~~dr~~WI~AL~~a~~~ 225 (645)
.-+|.|.. -.+.+. ...+.+|.|.|...+|++.++ -.+.+..|..||+.|..-
T Consensus 48 ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALmP 120 (125)
T 2coa_A 48 YKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALMS 120 (125)
T ss_dssp SEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGGG
T ss_pred eeeeehhHeecccccccccccCCCCCCceEEEEeCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhccC
Confidence 56777763 233332 123588999999999999874 136699999999998643
No 72
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.44 E-value=1.4e-06 Score=79.49 Aligned_cols=93 Identities=15% Similarity=0.218 Sum_probs=71.8
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
+.++|||-+.++.-+.|||+|++|+...|.||++.. ..++
T Consensus 8 vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e~----------------------------------------~~k~ 47 (129)
T 2d9z_A 8 MVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNES----------------------------------------GSKY 47 (129)
T ss_dssp SEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCSS----------------------------------------CCSC
T ss_pred eeecceEEEEccCCccccceeeEecCCeEEEEecCC----------------------------------------CCce
Confidence 468999999999999999999999999999999742 1223
Q ss_pred ceEEEeccc-eEEec--------CCCCccEEEEeCCeEEEEEcCC---------------HHHHHHHHHHHHHHHHh
Q 006435 173 FGEVHLKVS-SIRDS--------KSDDKRFSIFTGTKRLHLRAET---------------REDRFAWMEALQAVKDM 225 (645)
Q Consensus 173 ~G~I~L~~s-si~~~--------~~d~~~F~I~t~~rt~~L~AeS---------------~~dr~~WI~AL~~a~~~ 225 (645)
.-+|.|..- .+... ...+.+|.|.|.+.+|++.++. .+.++.|..||+.|..-
T Consensus 48 ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALmP 124 (129)
T 2d9z_A 48 YKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMS 124 (129)
T ss_dssp CCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHHH
T ss_pred eceeeHHHhcccccccCccccCCCCCCceEEEEECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhccC
Confidence 455666522 22221 1234899999999999998753 79999999999999753
No 73
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.38 E-value=2.3e-07 Score=92.93 Aligned_cols=35 Identities=23% Similarity=0.529 Sum_probs=33.2
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEec
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIH 127 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~ 127 (645)
+..+|||+|+|+..|+||+|||||+++.|.||+..
T Consensus 21 ~~~~g~l~~~~~~~~~w~~rw~vl~~~~~~~~~~~ 55 (228)
T 3tfm_A 21 PYFHSFLYMNGGLMNSWKRRWCVLKDETFLWFRSK 55 (228)
T ss_dssp CCEEEEEEECCTTTCCCEEEEEEEETTEEEEESSC
T ss_pred CceEEEEeecCcccccceEEEEEEeCCEEEEeccC
Confidence 57999999999999999999999999999999975
No 74
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.91 E-value=4.5e-05 Score=74.25 Aligned_cols=100 Identities=17% Similarity=0.303 Sum_probs=75.7
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
..+|-|..+...+ .|+.||++|=+.+|-|-+.++ ++..+. .... ..
T Consensus 72 l~eG~L~~k~~~~-~~~d~~~fLf~D~Ll~~~~~~-~ky~~~-------------------------------~~~~-~~ 117 (185)
T 2lg1_A 72 VRDGSVFLKNAAG-RLKEVQAVLLTDILVFLQEKD-QKYIFA-------------------------------SLDQ-KS 117 (185)
T ss_dssp EEEEEEEEECTTC-CEEEEEEEEESSEEECCEEET-TEEECC-------------------------------CCSS-SC
T ss_pred eeeceEEEeccCC-CeeeEEEEeecCEEEEEEecC-CEEEEE-------------------------------cccC-CC
Confidence 6899998655444 699999999999999987653 211110 0000 13
Q ss_pred eEEEeccceEEecCCCCccEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 174 GEVHLKVSSIRDSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t----~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
..|.|....++....+++.|.+++ +.+.|.|.|.|.+||..||++|+.|+..++
T Consensus 118 pvi~L~~~~vre~a~d~~~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~ 175 (185)
T 2lg1_A 118 TVISLKKLIVREVAHEEKGLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTLN 175 (185)
T ss_dssp SEEESSSCEEECCSSCSSEEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CeEeecceEEeccCCCCCeEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhCC
Confidence 678898888887766777887765 358999999999999999999999999885
No 75
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.61 E-value=0.00042 Score=74.73 Aligned_cols=110 Identities=18% Similarity=0.186 Sum_probs=75.6
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
..+|.|.++... +.|+.|||.|=+++|-|.+.++. +..+.... ....| + .+....-+
T Consensus 296 i~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~-k~~~~~~~---~~~~~---------------~---~~~~~~~k 352 (418)
T 3t06_A 296 IHEGPLTWRISK-DKTLDLHVLLLEDLLVLLQKQDE-KLLLKCHS---KTAVG---------------S---SDSKQTFS 352 (418)
T ss_dssp EEEEEEEECCBT-TBCCEEEEEEESSEEEEEEECSS-CEECCC----------------------------------CCC
T ss_pred EEeceEEEEeCC-CCeEEEEEEecCCEEEEEEEcCC-ceEEeecc---ccccc---------------C---CCcccccC
Confidence 589999877543 35899999999999999887532 11100000 00000 0 01122235
Q ss_pred eEEEeccceEEecCCCCccEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 174 GEVHLKVSSIRDSKSDDKRFSIFTG-----TKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t~-----~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+.|.|....|+....+.+.|.|... .++|.|+|.|.++++.||++|+.|+.-.
T Consensus 353 ~~i~l~~~~v~~~~~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~ 410 (418)
T 3t06_A 353 PVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA 410 (418)
T ss_dssp SEEEGGGEEEEECSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred CceechhceeccccccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence 7899998888877777888988763 3899999999999999999999999765
No 76
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=97.59 E-value=0.00014 Score=78.83 Aligned_cols=93 Identities=20% Similarity=0.174 Sum_probs=66.0
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
..+|.|.+... ++++.|||.|-+++|-|.|..... ....+
T Consensus 245 i~~g~l~~~~~--~~~~~r~~fLF~d~Ll~~k~~~~~--------------------------------------~y~~k 284 (434)
T 3mpx_A 245 LKEGTLMKVTG--KNRRPRHLFLMNDVLLYTYPQKDG--------------------------------------KYRLK 284 (434)
T ss_dssp EECCEEEEEET--TEEEEEEEEEESSEEEEEEECTTS--------------------------------------CEEEE
T ss_pred EecceEEEEeC--CCceEEEEEEECCEEEEEEecCCC--------------------------------------eEEEE
Confidence 57899988753 568999999999999999864211 11234
Q ss_pred eEEEeccceEEecCC--CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 174 GEVHLKVSSIRDSKS--DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 174 G~I~L~~ssi~~~~~--d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+.|.|....+..... ....|.|.++.++|.|+|.|.+++++||++|+.|+...
T Consensus 285 ~~i~L~~l~v~~~~~~~~~~~f~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 285 NTLAVANMKVSRPVMEKVPYALKIETSESCLMLSASSCAERDEWYGCLSRALPED 339 (434)
T ss_dssp EEEEC-----CCCCCTTSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHC----
T ss_pred EEEEcCCcEEEecCCCCCCeeEEEecCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 778887776654322 25778899999999999999999999999999999764
No 77
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=97.49 E-value=0.00051 Score=62.88 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=32.2
Q ss_pred CCccEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 189 DDKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 189 d~~~F~I~t~~--rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
.++.|+|+.++ ++++|.|.|+++++.||.+|+..+....
T Consensus 84 ~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~~ 124 (131)
T 1mai_A 84 EDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHSG 124 (131)
T ss_dssp GGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC---
T ss_pred ccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHhhh
Confidence 46789988775 7999999999999999999999876553
No 78
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.48 E-value=0.00042 Score=63.50 Aligned_cols=94 Identities=16% Similarity=0.240 Sum_probs=68.7
Q ss_pred CCceEEEEEeecC--------CCCCceeeEEEEeC------CeEEEEEecCCCccccchhhhccceeeccchhhhhhhcc
Q 006435 92 GNGISGVLYKWVN--------YGKGWRPRWFVLQD------GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRK 157 (645)
Q Consensus 92 ~~~~~G~L~K~~n--------~~KgWkrRWFVL~~------g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~ 157 (645)
-..++|.|.-+.. ....|+++||||.. -+|-||..+
T Consensus 17 e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PP------------------------------ 66 (136)
T 1v5m_A 17 DIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPP------------------------------ 66 (136)
T ss_dssp SCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESST------------------------------
T ss_pred eeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCC------------------------------
Confidence 3478998866542 34579999999932 368888643
Q ss_pred cccccccccccCCCCceEEEeccc-eEEec-----CCCCccEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 158 HKKETTSQRLLNRKPFGEVHLKVS-SIRDS-----KSDDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 158 ~~~~~~~~~~~~~kp~G~I~L~~s-si~~~-----~~d~~~F~I~t~~r-t~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
+..||+..|.+... .++.. ++.++.|.|.+..+ .|.|.|.++.+++.|+..|+.+...
T Consensus 67 ----------kssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~ 131 (136)
T 1v5m_A 67 ----------KASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDS 131 (136)
T ss_dssp ----------TSSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ----------cccCCccccchhhhhhhhhccccccCCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 23567788877532 34432 34578999998766 8999999999999999999887654
No 79
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=97.47 E-value=0.00051 Score=73.90 Aligned_cols=95 Identities=24% Similarity=0.259 Sum_probs=71.4
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|.|.++....+.++.|++.|=+++|-|-|.++. ....+
T Consensus 235 i~~G~l~~~~~~~~~~~~~~~fLF~d~Ll~~k~k~~---------------------------------------~y~~k 275 (406)
T 2vrw_B 235 KIDGELKITSVERRSKTDRYAFLLDKALLICKRRGD---------------------------------------SYDLK 275 (406)
T ss_dssp EEEEEEEEECSSCCSCEEEEEEEESSEEEEEEEETT---------------------------------------EEEEE
T ss_pred cccccEEEEecCCCccceEEEEecCCEEEEEEecCC---------------------------------------ceEEE
Confidence 578999988655667899999999999999886521 01123
Q ss_pred eEEEeccceEEecCCC-------CccEEEEe--CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 174 GEVHLKVSSIRDSKSD-------DKRFSIFT--GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d-------~~~F~I~t--~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
+.|.|....|...... ...|.|.. +.+.|.|.|.|.++++.||++|+.|+....
T Consensus 276 ~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 338 (406)
T 2vrw_B 276 ASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 338 (406)
T ss_dssp EEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred EEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence 6777777666543322 36788876 578999999999999999999999997653
No 80
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.46 E-value=0.00049 Score=63.48 Aligned_cols=97 Identities=18% Similarity=0.207 Sum_probs=69.1
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCce
Q 006435 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (645)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (645)
..|-...+....++=+.|+|+|=+++|.|.+.... ....+-+|
T Consensus 30 ~~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~~~-------------------------------------~~~f~~kg 72 (132)
T 1v61_A 30 FMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPR-------------------------------------MSGFMYQG 72 (132)
T ss_dssp CEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSS-------------------------------------SSCCEEEE
T ss_pred EEeeEEEEEcccCcceEEEEEEcCCeEEEEEecCC-------------------------------------CceEEEEE
Confidence 33444444333344578999999999999885310 01122458
Q ss_pred EEEeccceEEecC---CCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 175 EVHLKVSSIRDSK---SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 175 ~I~L~~ssi~~~~---~d~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
.|+|..-.|.... ...+.|.|.... +++.+.|.|.+|+++||++|+.++...++
T Consensus 73 klPL~g~~V~~~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~~~~~ 130 (132)
T 1v61_A 73 KIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKSGPS 130 (132)
T ss_dssp EECTTTCBCSTTCSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHHTTSCS
T ss_pred EEecceeEEEeccccccCccEEEEecCCCceEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 8888876665431 225789999876 99999999999999999999999998764
No 81
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=97.45 E-value=0.00071 Score=67.20 Aligned_cols=93 Identities=18% Similarity=0.290 Sum_probs=67.4
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeC------C-eEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccc
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQD------G-VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQ 165 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~------g-~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~ 165 (645)
+.++|+...+. +|.||+||.||+. . .|.-||++ .++
T Consensus 9 ~v~eg~vk~r~--~KkWk~rw~vlrk~s~~adcl~L~vYkd~--------~dr--------------------------- 51 (224)
T 3ml4_A 9 ALVEGQVKLRD--GKKWKSRWLVLRKPSPVADCLLMLVYKDK--------CER--------------------------- 51 (224)
T ss_dssp CSEEEEEEEC-----CCEEEEEEEECSSTTSSCEEEEEESSS--------HHH---------------------------
T ss_pred eeEEEeeeeec--CCceeeEEEEEEcCCCchheEEEEEEcCh--------hhh---------------------------
Confidence 36899998775 4689999999953 2 57788875 232
Q ss_pred cccCCCCceEEEeccc-eEEe---cCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006435 166 RLLNRKPFGEVHLKVS-SIRD---SKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (645)
Q Consensus 166 ~~~~~kp~G~I~L~~s-si~~---~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~ 223 (645)
.++.+++.+|.|... -+.. -+.....+.|++.+.++.|..++++.+.+|-..|+...
T Consensus 52 -~k~~~~KaslsL~~~~GlE~g~~ldk~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~sl 112 (224)
T 3ml4_A 52 -SKGLRERSSLTLEDICGLEPALPYEGLAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRYAL 112 (224)
T ss_dssp -HSCCCCSEEEEECCEEEEEEEEEETTEEEEEEEEESSCEEEEECSSHHHHHHHHHHHHHHT
T ss_pred -hcCCcccceeehHHhcCccccccccCcccEEEEEecCcEEEEEeCCHHHHHHHHHHHhhcc
Confidence 345567799999854 2221 13345677899999999999999999999999987744
No 82
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.44 E-value=0.00096 Score=70.75 Aligned_cols=110 Identities=15% Similarity=0.123 Sum_probs=74.0
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
..+|.|.++...+ .|+.|||.|=+++|-|.+.++. +.. ++..+... .. ..+......
T Consensus 260 i~eG~l~~~~~~~-~~~~~~~fLF~d~Ll~~k~k~~-k~~--------~k~~~~~~----------~~---~~~~k~~~~ 316 (377)
T 3p6a_A 260 VHEGPLTWRVTKD-KAVEVHVLLLDDLLLLLQRQDE-RLL--------LKSHSRTL----------TP---TPDGKTMLR 316 (377)
T ss_dssp EEEEEEEEESSSS-CEEEEEEEEESSEEEEEEEETT-EEE--------CCCCCCC----------------------CSC
T ss_pred EEECCcEEEecCC-CeEEEEEEeeCCEEEEEEEcCc-eeE--------Eeeccccc----------cc---CccccCCCC
Confidence 6899997765433 7899999999999999986531 111 00000000 00 001111123
Q ss_pred eEEEeccceEEecCCCCccEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 174 GEVHLKVSSIRDSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t----~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
+.|.|....+++...+.+.|.++. +...|.|.|.|.+|++.||++|+.|++.+
T Consensus 317 ~~i~l~~~~v~e~~~~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~ 373 (377)
T 3p6a_A 317 PVLRLTSAMTREVATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL 373 (377)
T ss_dssp SEEEGGGEEEEECTTCTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred CeEechhhhccccccccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 678888888888776777666544 45899999999999999999999999876
No 83
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.43 E-value=0.0013 Score=69.51 Aligned_cols=109 Identities=18% Similarity=0.210 Sum_probs=73.1
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|.|.+... .+.++.|++.|=+++|-|.+.++. +..+-... + ...|. .+....-+
T Consensus 254 i~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~-k~~~~~~~-~--~~~~~------------------~~~~~~~~ 310 (368)
T 1xcg_A 254 IHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDE-KLLLKCHS-K--TAVGS------------------SDSKQTFS 310 (368)
T ss_dssp EEEEEEEECCS-SSCCCEEEEEEESSEEEEEEECSS-CEECCC----------------------------------CCC
T ss_pred EeecceEeeec-CCCeeEEEEEcccccHHHhhcccc-cceeeecc-c--cccCC------------------CCcccCcC
Confidence 57999986543 346899999999999999986531 11100000 0 00000 01112235
Q ss_pred eEEEeccceEEecCCCCccEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 174 GEVHLKVSSIRDSKSDDKRFSIFTG-----TKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t~-----~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
+.|.|....++....+.+.|.|.+. .++|.|+|.|.++++.||++|+.|+..
T Consensus 311 ~~i~l~~~~v~~~~~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 311 PVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp SEEEGGGEEEEECSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CceEccceeeecccCCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 8899988888766567788887753 489999999999999999999999864
No 84
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=97.42 E-value=0.00089 Score=72.16 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=72.7
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|.|.+.....+.++.|+|.|=+++|-|-|..... .....-+
T Consensus 258 i~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~------------------------------------~~~~~~k 301 (402)
T 2dfk_A 258 IYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIR------------------------------------RDILYYK 301 (402)
T ss_dssp EEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSC------------------------------------TTCEEEE
T ss_pred EEeceEEEEeccCCceEEEEEEeeCCEEEEEEecccc------------------------------------CCceEEe
Confidence 5899999886544458999999999999999864200 0001124
Q ss_pred eEEEeccceEEecCCC---------CccEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 174 GEVHLKVSSIRDSKSD---------DKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d---------~~~F~I~t~--~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
+.|.|....|...... .+.|.|... .+.|.|+|.|.+++..||++|+.++.....
T Consensus 302 ~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~ 367 (402)
T 2dfk_A 302 GRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQE 367 (402)
T ss_dssp EEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 7888887766643221 257888765 579999999999999999999999887643
No 85
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=97.42 E-value=0.0008 Score=73.68 Aligned_cols=99 Identities=18% Similarity=0.166 Sum_probs=73.3
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|.|.+.....+.++.|+|.|=+++|-|-|..... .....-+
T Consensus 335 i~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~------------------------------------~~~~~~k 378 (466)
T 2pz1_A 335 IYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLR------------------------------------RDVLYYK 378 (466)
T ss_dssp EEEEEEEEECTTTCCEEEEEEEEETTEEEEEEECSSC------------------------------------TTCEEEE
T ss_pred EEeeeEEEEecCCCCeeEEEEEEECCEEEEEEecccc------------------------------------CCceEEe
Confidence 5899999886544568999999999999999864200 0011134
Q ss_pred eEEEeccceEEecCCC---------CccEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 174 GEVHLKVSSIRDSKSD---------DKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d---------~~~F~I~t~--~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
+.|.|....|...... .+.|.|... .+.|.|+|.|.++++.||++|+.++.....
T Consensus 379 ~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~ 444 (466)
T 2pz1_A 379 GRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQL 444 (466)
T ss_dssp EEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 7888887777643321 256888765 579999999999999999999999987644
No 86
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=97.42 E-value=0.0016 Score=58.22 Aligned_cols=96 Identities=13% Similarity=0.060 Sum_probs=66.1
Q ss_pred ceEEEEEeecC-CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 94 GISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 94 ~~~G~L~K~~n-~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
..+|.|.|-.. ..+.=++++|.|=+++|-|-+.... ... ..+-
T Consensus 9 v~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~--------~~~----------------------------~~~~ 52 (113)
T 1zc3_B 9 VYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQ--------RRG----------------------------MYRY 52 (113)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECC--------TTS----------------------------CEEE
T ss_pred EEeCcEEEEccccCCCCccEEEEecCCEEEEEEEecc--------Ccc----------------------------cEEE
Confidence 46899988753 2233356888898889998886421 000 0112
Q ss_pred ceEEEeccceEEe---cCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 173 FGEVHLKVSSIRD---SKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 173 ~G~I~L~~ssi~~---~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
...++|..-.+.. ...-...|.|.++.+++.++|+|.+|+.+||.+|+.|+..
T Consensus 53 ~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 53 NALYPLDRLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp EEEEETTTCEEEEECCBTTBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcccCEEEECCCCcccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 2456665444432 1223688999999999999999999999999999999864
No 87
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.40 E-value=0.00085 Score=62.39 Aligned_cols=88 Identities=14% Similarity=0.081 Sum_probs=64.0
Q ss_pred CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCceEEEeccceEEe
Q 006435 106 GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD 185 (645)
Q Consensus 106 ~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi~~ 185 (645)
.||=+.|+|-|=+++|-|-|.....+. ......++.+.|.+-.+..
T Consensus 30 ~kg~qqR~~FLFND~LL~TK~~~kkk~----------------------------------~~~Y~vr~~~~L~gm~V~~ 75 (140)
T 3qwm_A 30 KLGLHQREIFLFNDLLVVTKIFQKKKN----------------------------------SVTYSFRQSFSLYGMQVLL 75 (140)
T ss_dssp CTTTTEEEEEEESSCEEEEECCC---C----------------------------------CCCCCCEEEECCTTEEEEE
T ss_pred cccccceEEEEecchhhheeecccCCC----------------------------------CCceEEEEEeeecceEEEc
Confidence 456799999999999999983210000 1223455778887776665
Q ss_pred cCCC--CccEEEEeCC------eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 186 SKSD--DKRFSIFTGT------KRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 186 ~~~d--~~~F~I~t~~------rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
.... .+.|.|.+.. +++.|.|.|..||.+||++|+.+++...
T Consensus 76 ~e~e~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 76 FENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQ 125 (140)
T ss_dssp ECCSSCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 4433 5677787642 7899999999999999999999998763
No 88
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=97.34 E-value=0.00072 Score=76.51 Aligned_cols=95 Identities=23% Similarity=0.213 Sum_probs=72.8
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|.|.++....+.++.|||.|=+++|-|-|..+. ....+
T Consensus 407 l~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~---------------------------------------~y~~k 447 (587)
T 3ky9_A 407 KIDGELKITSVERRSKMDRYAFLLDKALLICKRRGD---------------------------------------SYDLK 447 (587)
T ss_dssp EEEEEEEEECSSCCSCEEEEEEEETTEEEEEEEETT---------------------------------------EEEEE
T ss_pred EEEeeEEEEeccCCCcceEEEEEECCEEEEEEecCC---------------------------------------EEEee
Confidence 579999998877788999999999999999986521 01134
Q ss_pred eEEEeccceEEecCCC-------CccEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 174 GEVHLKVSSIRDSKSD-------DKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d-------~~~F~I~t~~--rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
+.|.|....|...... .+.|.|.... ++|.|.|.|.++++.||++|+.|+....
T Consensus 448 ~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~ 510 (587)
T 3ky9_A 448 DFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 510 (587)
T ss_dssp EEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred eeechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence 7888888777654322 2568888754 8999999999999999999999997653
No 89
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.32 E-value=0.0011 Score=74.20 Aligned_cols=111 Identities=15% Similarity=0.136 Sum_probs=74.0
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|.|.+++.. +.|+.|||.|=+++|-|.|.++. +.. ++..+.. + .. ..+......
T Consensus 413 I~eG~l~~~~~~-~k~~~r~~fLF~D~LL~~k~k~~-ky~--------~k~~~~~----~------~~---~~d~k~~~~ 469 (536)
T 3odw_A 413 VHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDE-RLL--------LKSHSRT----L------TP---TPDGKTMLR 469 (536)
T ss_dssp EEEEEEEEESCC----CEEEEEEESSEEEEEEEETT-EEE--------CCCC-------------------------CCC
T ss_pred eeecceEEEecC-CCeeEEEEEEcCCEEEEEEEcCC-eEE--------Eeecccc----c------cc---ccccccccC
Confidence 689999887643 36899999999999999987531 111 0000000 0 00 001111234
Q ss_pred eEEEeccceEEecCCCCccEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 174 GEVHLKVSSIRDSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t----~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
+.|.|....++....+.+.|.++. +.++|.|.|.|.+|++.||++|+.|++.+.
T Consensus 470 ~~i~L~~l~v~e~~~d~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~ 527 (536)
T 3odw_A 470 PVLRLTSAMTREVATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 527 (536)
T ss_dssp SEEEGGGEEEEECTTCTTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSC
T ss_pred ceeecccceeecccccCCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCC
Confidence 689999888888777777777654 458999999999999999999999998764
No 90
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=97.17 E-value=0.0014 Score=68.97 Aligned_cols=99 Identities=18% Similarity=0.260 Sum_probs=72.3
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|.|.+++ .++.|+|.|=+++|-|-|..+.. .++.|. .....+.+
T Consensus 248 i~eG~l~~~g----~~~~~~~fLF~d~Ll~~k~~~~~-----------~~~~~~------------------~~~~y~~k 294 (354)
T 1dbh_A 248 IMEGTLTRVG----AKHERHIFLFDGLMICCKSNHGQ-----------PRLPGA------------------SNAEYRLK 294 (354)
T ss_dssp EEEEEEEETT----CSSCEEEEEESSEEEEEEECTTC-----------CCCTTS------------------CCCSEEEE
T ss_pred EEEeeEEEEe----cCceEEEEEeCCEEEEEecCCCC-----------CCCCCC------------------CCcceeEE
Confidence 6899999983 58999999999999999865210 000000 01122345
Q ss_pred eEEEeccceEEecCCC---CccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 174 GEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
+.|.|....|....+. .+.|.|.+.. +.|.|+|.|.+++..|+++|+.++..
T Consensus 295 ~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~~ 350 (354)
T 1dbh_A 295 EKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYR 350 (354)
T ss_dssp EEEESCSCEEEECCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred EEEeccceEEEeCCcccccCccEEEecCCCCEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 8899988887764322 4789998874 89999999999999999999998763
No 91
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.15 E-value=0.0029 Score=67.41 Aligned_cols=112 Identities=15% Similarity=0.181 Sum_probs=71.9
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|.|.+.... +.++.|++.|=+++|-|-|.++. +..+-.. .+.+ .. ..+....-+
T Consensus 258 i~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~-~~~~~~~----~~~~--------------~~---~~~~~~~~~ 314 (385)
T 1txd_A 258 IHEGPLVWKVNR-DKTIDLYTLLLEDILVLLQKQDD-RLVLRCH----SKIL--------------AS---TADSKHTFS 314 (385)
T ss_dssp EEEEEEEEESSS-SCBCCEEEEEESSEEEEEEEETT-EEECCC----------------------------------CCC
T ss_pred EEECcEEEEcCC-CCeEEEEEEecCCeeEEEEecCC-eeEEeec----cccc--------------cc---cCCCCcCCC
Confidence 589999865432 45899999999999999886531 1100000 0000 00 001122345
Q ss_pred eEEEeccceEEecCCCCccEE-EEe---CCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 174 GEVHLKVSSIRDSKSDDKRFS-IFT---GTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~-I~t---~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
+.|.|....++....+.+.|. |.. +.++|.|+|.|.++++.||++|+.+++.+..
T Consensus 315 ~~i~l~~~~v~~~~~d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~ 373 (385)
T 1txd_A 315 PVIKLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKE 373 (385)
T ss_dssp SEEEGGGEEEEECCC-CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CceecccccccccccCCceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccC
Confidence 889998887776555555554 443 3689999999999999999999999988754
No 92
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=97.10 E-value=0.0032 Score=66.59 Aligned_cols=103 Identities=20% Similarity=0.309 Sum_probs=71.9
Q ss_pred ceEEEEEeecCCCC-----------CceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccc
Q 006435 94 GISGVLYKWVNYGK-----------GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKET 162 (645)
Q Consensus 94 ~~~G~L~K~~n~~K-----------gWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~ 162 (645)
.++|.|.+|....+ .++.|+|.|=+++|-|-|...... + |.+
T Consensus 211 l~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~--------~-----~~~-------------- 263 (353)
T 1kz7_A 211 LMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENG--------E-----GYE-------------- 263 (353)
T ss_dssp EEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCC--------S-----SCC--------------
T ss_pred heecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccc--------c-----CCC--------------
Confidence 58999998753222 378999999999999988752100 0 000
Q ss_pred ccccccCCCCceEEEeccceEEec-CCCCccEEEEe--CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 163 TSQRLLNRKPFGEVHLKVSSIRDS-KSDDKRFSIFT--GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 163 ~~~~~~~~kp~G~I~L~~ssi~~~-~~d~~~F~I~t--~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
......-++.|.|....+... ..+.+.|.|.. +.++|.|+|.|.++++.|+++|+.|+...
T Consensus 264 ---~~~~y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 327 (353)
T 1kz7_A 264 ---KAPSYSYKQSLNMTAVGITENVKGDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQ 327 (353)
T ss_dssp ---CSCEEEEEEEEEGGGEEEECCBTTBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCeEEEEEEeEcccceeeEcCCCCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 000111246788877666654 34578999976 46899999999999999999999998765
No 93
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=96.82 E-value=0.007 Score=62.60 Aligned_cols=98 Identities=13% Similarity=0.211 Sum_probs=70.7
Q ss_pred ceEEEEEeecC--CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 94 GISGVLYKWVN--YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 94 ~~~G~L~K~~n--~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
...|.+..|.+ ..+..+.|+|.|=+++|-|-|..... .. .....
T Consensus 204 i~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~--------~~--------------------------~~~y~ 249 (311)
T 1nty_A 204 ILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDS--------SG--------------------------RSKYL 249 (311)
T ss_dssp EEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECT--------TC--------------------------CEEEE
T ss_pred eeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccC--------CC--------------------------CceeE
Confidence 46788877743 34567999999999999998864210 00 00111
Q ss_pred CceEEEeccceEEec-CCCCccEEEEe-----CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 172 PFGEVHLKVSSIRDS-KSDDKRFSIFT-----GTKRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 172 p~G~I~L~~ssi~~~-~~d~~~F~I~t-----~~rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
-++.|.|....+... ..+++.|.|.. +.+.|.|+|.|.++++.|+++|+.|++.
T Consensus 250 ~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e 309 (311)
T 1nty_A 250 YKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 309 (311)
T ss_dssp EEEEEEGGGEEEECCCTTCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EeeeeeccceeeEEccCCCCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhh
Confidence 347888887777653 34568899976 3578999999999999999999999875
No 94
>2rr3_B OSBP, oxysterol-binding protein 1; lipid transport, transport, protein-peptide complex, major S protein domain, protein binding; NMR {Homo sapiens}
Probab=96.68 E-value=0.0013 Score=48.44 Aligned_cols=23 Identities=26% Similarity=0.556 Sum_probs=19.6
Q ss_pred CCCCCCccccccccccccccccC
Q 006435 346 GVEDETDEDENTFFDTRDFLSSS 368 (645)
Q Consensus 346 ~~~~~~~dde~~f~Da~~~~~~~ 368 (645)
+++.+++|||+|||||.+|++++
T Consensus 9 KGe~SdEDed~EfFDA~efITv~ 31 (47)
T 2rr3_B 9 KGDMSDEDDENEFFDAPEIITMP 31 (47)
T ss_dssp CCCSCCCCCSSCCBCCCSSCSSC
T ss_pred cccccccccccccccccceeEcc
Confidence 45777888899999999999886
No 95
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=96.62 E-value=0.011 Score=61.92 Aligned_cols=91 Identities=16% Similarity=0.187 Sum_probs=63.3
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC-C
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK-P 172 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k-p 172 (645)
..+|.|.+.. | +.|++.|=+++|-|-|..... + ....+ -
T Consensus 233 i~~G~l~~~~----~-~~~~~fLF~d~Ll~~k~~~~~------~-----------------------------~~~~~v~ 272 (346)
T 2z0q_A 233 CCHGELKNNR----G-VKLHVFLFQEVLVITRAVTHN------E-----------------------------QLCYQLY 272 (346)
T ss_dssp EEEEEEEETT----S-CEEEEEEESSEEEEEEEEEET------T-----------------------------EEEEEES
T ss_pred EEeceeEECC----C-cEEEEEECCCcEEEEEEeccC------C-----------------------------ceeeeee
Confidence 4789997632 2 889999999999998864110 0 00000 1
Q ss_pred ceEEEeccceEEecCCC------------------CccEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIRDSKSD------------------DKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~~d------------------~~~F~I~t----~~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
++.|+|....|....+. ...|.|.. +.++|.|+|.|.++++.||++|+.|++
T Consensus 273 k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~aie 346 (346)
T 2z0q_A 273 RQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKE 346 (346)
T ss_dssp SCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhhC
Confidence 35677776666554321 35788874 368999999999999999999999873
No 96
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=96.41 E-value=0.018 Score=60.69 Aligned_cols=102 Identities=14% Similarity=0.206 Sum_probs=68.9
Q ss_pred ceEEEEEeecC-----CCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhccccccccccccc
Q 006435 94 GISGVLYKWVN-----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (645)
Q Consensus 94 ~~~G~L~K~~n-----~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (645)
...|-+..+.. ..+.++.|++.|=+++|-|-|..... . + |.. ..
T Consensus 208 l~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~-~----------~--~~~------------------~~ 256 (354)
T 2rgn_B 208 LGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGG-V----------R--GGT------------------QP 256 (354)
T ss_dssp EEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC---------------------------------------C
T ss_pred cccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCC-C----------C--CCC------------------CC
Confidence 35676665532 12457999999999999998865210 0 0 000 01
Q ss_pred CCCCceEEEeccceEEec-CCCCccEEEEe-----CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 169 NRKPFGEVHLKVSSIRDS-KSDDKRFSIFT-----GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~-~~d~~~F~I~t-----~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
...-++.|.|....+... ..+.+.|.|.. +...|.|+|.|.++++.||++|+.|+...
T Consensus 257 ~y~~k~~i~l~~~~v~~~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 320 (354)
T 2rgn_B 257 GYVYKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQ 320 (354)
T ss_dssp CEEEEEEEEGGGEEEEESGGGCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEcceeeccceeeeeccCCCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 112347788887777654 34578999876 24899999999999999999999998754
No 97
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=96.19 E-value=0.00079 Score=74.08 Aligned_cols=107 Identities=21% Similarity=0.230 Sum_probs=0.0
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC-C
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK-P 172 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k-p 172 (645)
..+|.|.|. ++++.|||.|=+++|-|.+.....+. -.|.+. .. +.. .....+ -
T Consensus 254 i~eG~l~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~~-----------~~g~~~--~f--------~~~-~~~~~~v~ 307 (510)
T 3jzy_A 254 LHSGKLYKT----KSNKELHGFLFNDFLLLTYMVKQFAV-----------SSGSEK--LF--------SSK-SNAQFKMY 307 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeceEEEc----CCCcEEEEEcccceeEEeeecccccc-----------cCCccc--cc--------Ccc-cccceeEE
Confidence 356777664 56899999999989998884321000 000000 00 000 000111 1
Q ss_pred ceEEEeccceEEec---CCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 173 FGEVHLKVSSIRDS---KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 173 ~G~I~L~~ssi~~~---~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
++.|.|....|... ....+.|.|....++|.|+|.|.+++..||++|+.|+..+
T Consensus 308 k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 308 KTPIFLNEVLVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp ---------------------------------------------------------
T ss_pred cCceehhheEEeccCCCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 35666766655442 2346789999999999999999999999999999998765
No 98
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=95.43 E-value=0.11 Score=55.10 Aligned_cols=58 Identities=14% Similarity=0.134 Sum_probs=44.4
Q ss_pred CCCceEEEeccceEEecCCCC----ccEEEE--------eCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006435 170 RKPFGEVHLKVSSIRDSKSDD----KRFSIF--------TGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (645)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~d~----~~F~I~--------t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~ 227 (645)
.+-++.|.|....|......+ ..|.|. .+.+.|.|+|.|.+++++||++|..++....
T Consensus 300 y~~k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~ 369 (377)
T 1foe_A 300 FRFRHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKH 369 (377)
T ss_dssp CCCEEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred eeEeeeccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHh
Confidence 345689999888777543222 347776 2468999999999999999999999987653
No 99
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=94.83 E-value=0.069 Score=64.45 Aligned_cols=98 Identities=18% Similarity=0.274 Sum_probs=68.9
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCCc
Q 006435 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (645)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (645)
.++|.|.|.+. + +.|||.|=+++|-|-|..... .++.|. ......-+
T Consensus 445 i~eG~l~~~~~---k-~~r~~FLF~D~Ll~~K~~~~~-----------~~~~g~------------------~~~~y~~k 491 (1049)
T 3ksy_A 445 IMEGTLTRVGA---K-HERHIFLFDGLMICCKSNHGQ-----------PRLPGA------------------SNAEYRLK 491 (1049)
T ss_dssp CCEEEEEETTC---S-SCEEEEEETTEEEEEECCTTC-----------CCCTTS------------------CCCSCCCC
T ss_pred EEeceEEEEcc---C-ceEEEEeeCCeEEEEEecCcc-----------CCCCCC------------------CCCceEEE
Confidence 58999998762 2 899999999999999865210 011110 01123345
Q ss_pred eEEEeccceEEecCCC---CccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 174 GEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~~-rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
+.|.|....|...... .+.|.|.... .+|.|+|.|.++++.||++|+.++.
T Consensus 492 ~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 492 EKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQY 546 (1049)
T ss_dssp CEECCSSCCCCCCCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEcCceEEEECCCCccccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 8888887766544322 3678887654 6999999999999999999988765
No 100
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=92.88 E-value=0.6 Score=53.80 Aligned_cols=94 Identities=17% Similarity=0.255 Sum_probs=57.4
Q ss_pred CceEEEEEeecCCC-CCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCC
Q 006435 93 NGISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (645)
Q Consensus 93 ~~~~G~L~K~~n~~-KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (645)
..+.||+.|+++.+ ..||+|+|.|..+.|.++.... .
T Consensus 559 ~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~~-----------~------------------------------- 596 (689)
T 3v5w_A 559 CIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGE-----------A------------------------------- 596 (689)
T ss_dssp CCEEEEEEEC-------CEEEEEEEETTEEEEECTTS-----------C-------------------------------
T ss_pred ceeecccccCCCcccchhhhhccccCCCcccccccCC-----------C-------------------------------
Confidence 46899999998755 5799999999888887664210 0
Q ss_pred CceEEEeccc-eEEe-cCCCCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006435 172 PFGEVHLKVS-SIRD-SKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (645)
Q Consensus 172 p~G~I~L~~s-si~~-~~~d~~~F~I~t-~~rt~~L~AeS~~dr~~WI~AL~~a~~~~~~ 228 (645)
|...+.+... .+.. .......|.+.. ..|+|.+.+.|..++.+|..+|+.+-....+
T Consensus 597 ~~~l~~~~~v~~v~k~~i~~~~~l~~~~k~~k~f~~~t~~~~~~~~W~~~i~~~~~~~~~ 656 (689)
T 3v5w_A 597 PQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFILQCDSDPELVQWKKELRDAYREAQQ 656 (689)
T ss_dssp CCEEEEGGGEEEEEEEESSSCEEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceeeeccccccccCcCCCCcceeeeecCCcEEEEECCChHHHHHHHHHHHHHHHHHHH
Confidence 1122222211 1100 011234455543 5799999999999999999999987654444
No 101
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=90.97 E-value=0.88 Score=53.44 Aligned_cols=36 Identities=28% Similarity=0.315 Sum_probs=30.0
Q ss_pred CCccEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 189 DDKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 189 d~~~F~I~t~~-----rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
+++.|+|+.+. +.++|.|.++++++.|++.|+....
T Consensus 102 e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~ 142 (816)
T 3qr0_A 102 QDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAY 142 (816)
T ss_dssp HHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 36889988764 4569999999999999999988654
No 102
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=89.92 E-value=1.9 Score=50.30 Aligned_cols=90 Identities=27% Similarity=0.368 Sum_probs=58.2
Q ss_pred CceEEEEEeec-CC-CCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCC
Q 006435 93 NGISGVLYKWV-NY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (645)
Q Consensus 93 ~~~~G~L~K~~-n~-~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (645)
+...|||.... +. ..|=|.-||||.-..|++||+.. +.++
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~------------------------------ 581 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDE--------EKEK------------------------------ 581 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTT--------CCCE------------------------------
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchh--------hhcc------------------------------
Confidence 46889999863 33 34689999999999999999742 1111
Q ss_pred CCceEEEeccceEEecC----CCCccEEEEeCC--------eEEEEEcCCHHHHHHHHHHHHHH
Q 006435 171 KPFGEVHLKVSSIRDSK----SDDKRFSIFTGT--------KRLHLRAETREDRFAWMEALQAV 222 (645)
Q Consensus 171 kp~G~I~L~~ssi~~~~----~d~~~F~I~t~~--------rt~~L~AeS~~dr~~WI~AL~~a 222 (645)
+=.+.|....++... +....|.|+.+. |++-|.|++.++...|...+-.|
T Consensus 582 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 643 (772)
T 3zvr_A 582 --KYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 643 (772)
T ss_dssp --EEEEECTTEEEEEC-------CEEEEEEETTSSCSBTTBSEEEEEESSHHHHHHHHHHHHHT
T ss_pred --cccccccccccchhhhccccccccccccCCccccccchhhhhhhhccccccchhhHHhhhhc
Confidence 123333333333221 224567777642 68999999999999999887544
No 103
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=89.18 E-value=0.83 Score=46.54 Aligned_cols=52 Identities=21% Similarity=0.338 Sum_probs=42.4
Q ss_pred ceEEEeccceEEec----CCCCccEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIRDS----KSDDKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 173 ~G~I~L~~ssi~~~----~~d~~~F~I~t~--~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
.+.|.|+.|.+... +...+.|.|.++ ..++.|+|.+.+++.+|+++|..++.
T Consensus 205 ~~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 205 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp CEEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 48899998877532 224678999885 58899999999999999999999874
No 104
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=89.02 E-value=0.77 Score=44.16 Aligned_cols=52 Identities=21% Similarity=0.338 Sum_probs=42.8
Q ss_pred ceEEEeccceEEec----CCCCccEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006435 173 FGEVHLKVSSIRDS----KSDDKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKD 224 (645)
Q Consensus 173 ~G~I~L~~ssi~~~----~~d~~~F~I~t~--~rt~~L~AeS~~dr~~WI~AL~~a~~ 224 (645)
...|.|+-|-|... +...+.|+|.++ ..+..|+|.+..+..+|++||.+.+.
T Consensus 120 ~~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 120 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp CEEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred ceeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 37899999977532 235688999986 48999999999999999999998763
No 105
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=86.15 E-value=1.4 Score=39.63 Aligned_cols=98 Identities=13% Similarity=0.141 Sum_probs=68.2
Q ss_pred CceEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhhccceeeccchhhhhhhcccccccccccccCCCC
Q 006435 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (645)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYk~~~~~~i~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (645)
..+.|++.-|....| =+.|+.-|=+..|-+.|.... . ......-
T Consensus 10 Ll~q~~f~V~~~~~k-~~eR~vFLFe~~ilf~K~~~~-------~----------------------------~~~~Y~~ 53 (119)
T 1fho_A 10 IIRHDAFQVWEGDEP-PKLRYVFLFRNKIMFTEQDAS-------T----------------------------SPPSYTH 53 (119)
T ss_dssp SSEEEEEEECSTTCS-CEEEEEEEETTEEEEEEECCS-------S----------------------------SSCCCSS
T ss_pred ccccCceEEEeCCCC-cceEEEEEecCcEEEEEEecC-------C----------------------------CCCcEEE
Confidence 468999999965433 355776677777777775410 0 0111223
Q ss_pred ceEEEeccceEEecCC--CCccEEEEeCC--eEEEE--EcCCHH-HHHHHHHHHHHHHHhc
Q 006435 173 FGEVHLKVSSIRDSKS--DDKRFSIFTGT--KRLHL--RAETRE-DRFAWMEALQAVKDMF 226 (645)
Q Consensus 173 ~G~I~L~~ssi~~~~~--d~~~F~I~t~~--rt~~L--~AeS~~-dr~~WI~AL~~a~~~~ 226 (645)
+..|.|....+.++.. |.++|.|..+. ..|.+ +|.|.+ .++.||+.|+.+++.+
T Consensus 54 K~~ikl~~~~lte~~~~~d~~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~~ 114 (119)
T 1fho_A 54 YSSIRLDKYNIRQHTTDEDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEKY 114 (119)
T ss_dssp CCEEESSSCEEEEECTTCCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHHH
T ss_pred eeEEeeceeEEEecCCCCCCcEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHHHH
Confidence 4778888888877644 56789996654 57778 999999 9999999999876655
No 106
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=77.46 E-value=9.1 Score=45.32 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=31.4
Q ss_pred CCCccEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006435 188 SDDKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKDM 225 (645)
Q Consensus 188 ~d~~~F~I~t~~-----rt~~L~AeS~~dr~~WI~AL~~a~~~ 225 (645)
..++.|+|..+. ++++|.|.++++.+.|++.|+.....
T Consensus 98 ~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~ 140 (885)
T 3ohm_B 98 LEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMN 140 (885)
T ss_dssp -CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred ccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhh
Confidence 457899988764 47999999999999999999886653
No 107
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=76.93 E-value=8.6 Score=45.00 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=31.7
Q ss_pred CCccEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 189 DDKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 189 d~~~F~I~t~~-----rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
.++.|+|..+. ++++|.|.++++++.|++.|+......
T Consensus 95 e~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~ 137 (799)
T 2zkm_X 95 LLKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKHP 137 (799)
T ss_dssp GGTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHCT
T ss_pred ccceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 46789987764 479999999999999999999877643
No 108
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=54.21 E-value=81 Score=29.95 Aligned_cols=44 Identities=9% Similarity=0.169 Sum_probs=35.1
Q ss_pred eEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 182 SIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 182 si~~~~~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
.|......+..|.|.- +|+|+.+|++..||..+|..|-..-..+
T Consensus 107 ~Ie~~~~~~~gF~ltl-~K~Y~W~a~s~~Er~~FI~sL~K~y~ky 150 (171)
T 3hie_A 107 RVEKDLEISEGFILTM-SKKYYWETNSAKERTVFIKSLITLYIQT 150 (171)
T ss_dssp EEEECSSCTTEEEEES-SSEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred eeeccCCCCCcEEEEe-CCeEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 3433334577898877 5999999999999999999998877665
No 109
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=46.90 E-value=66 Score=26.71 Aligned_cols=58 Identities=21% Similarity=0.227 Sum_probs=33.7
Q ss_pred cHHHHHHHHhhhcccHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHHhH
Q 006435 244 STEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVDE 311 (645)
Q Consensus 244 s~e~L~~rL~e~~~~~~~i~~~eqim~~E~s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tvv~~ 311 (645)
..++||.||.|.- .....|+..+..--..+..-+..|.+.+..++.+..+++..+.-.
T Consensus 8 VeDKLRrrl~E~~----------~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~l 65 (78)
T 3iv1_A 8 VSDKLRWRMKEEM----------DRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELL 65 (78)
T ss_dssp HHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----------HHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999887642 233445555554444444444455566666666666777665533
No 110
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=42.03 E-value=1.9e+02 Score=26.29 Aligned_cols=20 Identities=15% Similarity=0.209 Sum_probs=15.1
Q ss_pred CccEEEEeCCeEEEEEcCCH
Q 006435 190 DKRFSIFTGTKRLHLRAETR 209 (645)
Q Consensus 190 ~~~F~I~t~~rt~~L~AeS~ 209 (645)
..++.|.-.++.|.|.++..
T Consensus 7 k~~V~V~I~Gk~Y~i~g~e~ 26 (138)
T 3hnw_A 7 KNTAEVILGGKVIKLGGYES 26 (138)
T ss_dssp --CEEEEETTEEEEECSCSC
T ss_pred CCeeEEEECCEEEEecCCCc
Confidence 45678888999999998743
No 111
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=41.59 E-value=79 Score=25.83 Aligned_cols=43 Identities=19% Similarity=0.295 Sum_probs=35.3
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHHh
Q 006435 268 IMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVD 310 (645)
Q Consensus 268 im~~E~s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tvv~ 310 (645)
...+|..++..+++.++..|..+++.|..+|++-..||..+..
T Consensus 18 ma~sEI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l~~ 60 (72)
T 2xu6_A 18 STMSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLMLEDNLKQ 60 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3556888888999999999999999999888876777766553
No 112
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=37.81 E-value=1e+02 Score=30.67 Aligned_cols=47 Identities=19% Similarity=0.283 Sum_probs=39.5
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHHhHhHh
Q 006435 268 IMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVDESQR 314 (645)
Q Consensus 268 im~~E~s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tvv~~sk~ 314 (645)
...+|+.++-.+|+.++..|..+++.|..+|++-..||..|..-..+
T Consensus 174 ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~V~~R 220 (242)
T 3uux_B 174 STLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDR 220 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 46778999999999999999999999999998878888877654444
No 113
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=36.74 E-value=1.5e+02 Score=30.68 Aligned_cols=38 Identities=11% Similarity=0.176 Sum_probs=32.3
Q ss_pred CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 188 SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 188 ~d~~~F~I~t~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
..+..|.|.- +|.|+..|++..||..+|..|-..-..+
T Consensus 183 ~~~~gF~LTl-~K~YyW~A~s~kER~~FI~sLvKiy~KY 220 (320)
T 3a58_A 183 EISEGFILTM-SKKYYWETNSAKERTVFIKSLITLYIQT 220 (320)
T ss_dssp SCTTEEEEES-SSEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEe-CCceEEecCCHHHHHHHHHHHHHHHHHH
Confidence 3457788777 8999999999999999999998876655
No 114
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=36.17 E-value=1.2e+02 Score=27.21 Aligned_cols=53 Identities=21% Similarity=0.327 Sum_probs=39.1
Q ss_pred eEEEecc-ceEEecCCCCccEEEEe------CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006435 174 GEVHLKV-SSIRDSKSDDKRFSIFT------GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (645)
Q Consensus 174 G~I~L~~-ssi~~~~~d~~~F~I~t------~~rt~~L~AeS~~dr~~WI~AL~~a~~~~ 226 (645)
-++|+.. -.+..+..-+..|.|+- ..|+|.|-|.|++++.+=|..|+..++.+
T Consensus 57 tS~H~s~Vv~~K~s~k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ik~~~~~Y 116 (121)
T 3ulb_A 57 KSLHISQVVLVKKSKRVPEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTRLQNLLSAY 116 (121)
T ss_dssp EEEEGGGEEEEEECSSCTTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeEEEEEecccCCCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 4556542 23345555667777543 25999999999999999999999998865
No 115
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=34.02 E-value=2.5e+02 Score=25.17 Aligned_cols=70 Identities=11% Similarity=0.177 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHhcccccCCccCCCCCcccccHHHHHHHHhhhcccHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 006435 210 EDRFAWMEALQAVKDMFPRMSNSELMAPMDSIQVSTEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQWL 289 (645)
Q Consensus 210 ~dr~~WI~AL~~a~~~~~~~~~~~~~~~~~~~~~s~e~L~~rL~e~~~~~~~i~~~eqim~~E~s~l~~qL~~~~e~~~~ 289 (645)
++-..|+..|+..+..= .+.+.++.-|.....++....+..+++.....++..+++.+++.+..
T Consensus 43 ~~dl~~l~~I~~lr~~G----------------~sL~eIk~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~ 106 (142)
T 3gp4_A 43 AEDLRWILFTRQMRRAG----------------LSIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDR 106 (142)
T ss_dssp HHHHHHHHHHHHHHHTT----------------CCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC----------------CCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777777765421 34445555443211111112233344444555555556555554444
Q ss_pred HHHHHH
Q 006435 290 LIDTLR 295 (645)
Q Consensus 290 L~d~L~ 295 (645)
|...|.
T Consensus 107 L~~~i~ 112 (142)
T 3gp4_A 107 LDFKID 112 (142)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333343
No 116
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=33.99 E-value=1.3e+02 Score=23.54 Aligned_cols=46 Identities=22% Similarity=0.128 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhh
Q 006435 260 EVIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLE 305 (645)
Q Consensus 260 ~~i~~~eqim~~E~s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE 305 (645)
.+...|-+....+...++.+++.+.+....|...+..++.|...|-
T Consensus 12 ~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk 57 (63)
T 1ci6_A 12 TAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLK 57 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777777778888888888888877777777777777655553
No 117
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=32.78 E-value=67 Score=24.51 Aligned_cols=38 Identities=18% Similarity=0.251 Sum_probs=27.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHHhH
Q 006435 274 APLQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVDE 311 (645)
Q Consensus 274 s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tvv~~ 311 (645)
.+++.++..+..+-..|.++|+...+|...|.++|...
T Consensus 12 ~~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~L 49 (51)
T 3m91_A 12 HQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRL 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35677777887777778888887777777776666654
No 118
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=30.64 E-value=97 Score=23.93 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHHh
Q 006435 276 LQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVD 310 (645)
Q Consensus 276 l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tvv~ 310 (645)
+..+++.+++....|-.+|..++..+.+||..|..
T Consensus 15 LkDqV~eL~qe~k~m~k~lEeEqkARk~LE~~vrk 49 (56)
T 2w6b_A 15 LKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRK 49 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555556665555555666655543
No 119
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=28.23 E-value=1.8e+02 Score=22.67 Aligned_cols=48 Identities=21% Similarity=0.155 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhH
Q 006435 261 VIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENTV 308 (645)
Q Consensus 261 ~i~~~eqim~~E~s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tv 308 (645)
+...|-+.-......|+.+...+......|...+..+..+...|...+
T Consensus 13 AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l 60 (63)
T 2wt7_A 13 AAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFIL 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346777777777777787777777777777777766666666655443
No 120
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=27.52 E-value=2.4e+02 Score=25.04 Aligned_cols=13 Identities=31% Similarity=0.112 Sum_probs=5.1
Q ss_pred hhhhHHHHHHHHH
Q 006435 272 EFAPLQSQLLLLK 284 (645)
Q Consensus 272 E~s~l~~qL~~~~ 284 (645)
|...++.+|+.+.
T Consensus 49 Ek~~L~~qL~~E~ 61 (129)
T 2fxo_A 49 EKNDLQLQVQAEQ 61 (129)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333444444333
No 121
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=25.76 E-value=3.1e+02 Score=23.61 Aligned_cols=56 Identities=13% Similarity=0.059 Sum_probs=31.2
Q ss_pred HHHHHHHHhhhcccHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhh
Q 006435 245 TEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENT 307 (645)
Q Consensus 245 ~e~L~~rL~e~~~~~~~i~~~eqim~~E~s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~t 307 (645)
.+++|.++.+...- ..-...|+..|+..|..+..+|...+..+.+++.|-.+|-.+
T Consensus 7 ~e~lre~l~~le~~-------~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTas 62 (97)
T 2eqb_B 7 YNQLKEDYNTLKRE-------LSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTAS 62 (97)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666666543211 112455666667777777776666666665555555555333
No 122
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=24.46 E-value=2.1e+02 Score=22.05 Aligned_cols=46 Identities=17% Similarity=0.070 Sum_probs=29.3
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhh
Q 006435 262 IQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENT 307 (645)
Q Consensus 262 i~~~eqim~~E~s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~t 307 (645)
...|-+.-.....+|+.+...+......|...+..+..|...|.+.
T Consensus 13 A~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~ 58 (61)
T 1t2k_D 13 ASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQL 58 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567666666666777777777766666666666666655555433
No 123
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=23.72 E-value=1.9e+02 Score=22.37 Aligned_cols=48 Identities=21% Similarity=0.214 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhH
Q 006435 261 VIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENTV 308 (645)
Q Consensus 261 ~i~~~eqim~~E~s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tv 308 (645)
+.+.|-+.-.....+|+.++..+......|...+..+..|...|.+.|
T Consensus 12 AA~k~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk~~l 59 (62)
T 1jnm_A 12 AASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKV 59 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346777777777777777777777777777777776666665554443
No 124
>3opc_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, chaperone; HET: MSE; 2.09A {Bordetella pertussis}
Probab=21.08 E-value=2.1e+02 Score=25.70 Aligned_cols=56 Identities=25% Similarity=0.281 Sum_probs=23.7
Q ss_pred cHHHHHHHHhhhcccHHHHHHHHHHHHhhhhhHHH-----HHHHHHHHHHHHHHHHHHHHHhcc
Q 006435 244 STEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQS-----QLLLLKQKQWLLIDTLRQLETEKV 302 (645)
Q Consensus 244 s~e~L~~rL~e~~~~~~~i~~~eqim~~E~s~l~~-----qL~~~~e~~~~L~d~L~~le~ek~ 302 (645)
+.+.|..-|.++- +.++.-.+++..|...+.. .|...-++...+++.|.+++.++.
T Consensus 5 ~~~~L~~~L~~~~---~~l~~L~~lL~~E~~~L~~~~d~~~L~~i~~~K~~ll~~L~~~~~~R~ 65 (154)
T 3opc_A 5 NSAALKSCLEREN---ALVVEFLHALEAETEALMDRRAHESLQAAVQRKETLADDLAQLGAERD 65 (154)
T ss_dssp CHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555554432 2233334444444444422 233333333445555554444433
No 125
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=21.05 E-value=3e+02 Score=24.16 Aligned_cols=38 Identities=24% Similarity=0.261 Sum_probs=27.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhH
Q 006435 271 NEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENTV 308 (645)
Q Consensus 271 ~E~s~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tv 308 (645)
+..+.||..|..++..+..|-..|+.+|+.+.+||++-
T Consensus 35 ~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~ 72 (111)
T 2v66_B 35 KQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAK 72 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 34555777777777777777788888888888887643
Done!